Lcy12g008030 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy12g008030
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Zinc finger protein
Location	Chr12: 33619370 .. 33619933 (+)
RNA-Seq Expression	Lcy12g008030
Synteny	Lcy12g008030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTCTCTTCACAAATAGTAGTCCATGGCTACTTCAACAAGATAGCCAAAGAGAGACAAAACCAAACCCAAAAGACAAGCCCCATCATGTTTTTTCTTTCAACCTAAGCCTCAACAAACACAAGAATTTGGAAGAACTCAACCTCATTGATACTTTTGATAATGCTTGTAAAGAAGCAGCTGATCAGAAGCCTAGAGTTTTCTCTTGCAATTATTGCCAAAGGAAGTTCTTTAGCTCACAAGCTCTTGGTGGCCACCAAAATGCTCACAGCCAAGAGAGAAAGCTGGCCAAAAGAGGTTTTAAATACCCTTTCCATAGCTTCAATAGATCATGCTTTGGAATTCAAACACATTCTATGGTACTTCACAAGCCTTCTTCCCTTCCACATAAGTTTTATAGGCAGCATGGGAAAGGAGGACTATTTCGGGGGAGCTTTCGGTCACGGAATGGCGGTCAGAAGGCGTCGGCGGTCGCCGTTACGTCGTGGCATGATCGGTTCTCGAAGAGTAAATGTAATGAATTGCTCGAGCTAGAGTGTCTAGACTTGTCTCTTAAGCTCTAA

mRNA sequence

ATGAGTCTCTTCACAAATAGTAGTCCATGGCTACTTCAACAAGATAGCCAAAGAGAGACAAAACCAAACCCAAAAGACAAGCCCCATCATGTTTTTTCTTTCAACCTAAGCCTCAACAAACACAAGAATTTGGAAGAACTCAACCTCATTGATACTTTTGATAATGCTTGTAAAGAAGCAGCTGATCAGAAGCCTAGAGTTTTCTCTTGCAATTATTGCCAAAGGAAGTTCTTTAGCTCACAAGCTCTTGGTGGCCACCAAAATGCTCACAGCCAAGAGAGAAAGCTGGCCAAAAGAGGTTTTAAATACCCTTTCCATAGCTTCAATAGATCATGCTTTGGAATTCAAACACATTCTATGGTACTTCACAAGCCTTCTTCCCTTCCACATAAGTTTTATAGGCAGCATGGGAAAGGAGGACTATTTCGGGGGAGCTTTCGGTCACGGAATGGCGGTCAGAAGGCGTCGGCGGTCGCCGTTACGTCGTGGCATGATCGGTTCTCGAAGAGTAAATGTAATGAATTGCTCGAGCTAGAGTGTCTAGACTTGTCTCTTAAGCTCTAA

Coding sequence (CDS)

ATGAGTCTCTTCACAAATAGTAGTCCATGGCTACTTCAACAAGATAGCCAAAGAGAGACAAAACCAAACCCAAAAGACAAGCCCCATCATGTTTTTTCTTTCAACCTAAGCCTCAACAAACACAAGAATTTGGAAGAACTCAACCTCATTGATACTTTTGATAATGCTTGTAAAGAAGCAGCTGATCAGAAGCCTAGAGTTTTCTCTTGCAATTATTGCCAAAGGAAGTTCTTTAGCTCACAAGCTCTTGGTGGCCACCAAAATGCTCACAGCCAAGAGAGAAAGCTGGCCAAAAGAGGTTTTAAATACCCTTTCCATAGCTTCAATAGATCATGCTTTGGAATTCAAACACATTCTATGGTACTTCACAAGCCTTCTTCCCTTCCACATAAGTTTTATAGGCAGCATGGGAAAGGAGGACTATTTCGGGGGAGCTTTCGGTCACGGAATGGCGGTCAGAAGGCGTCGGCGGTCGCCGTTACGTCGTGGCATGATCGGTTCTCGAAGAGTAAATGTAATGAATTGCTCGAGCTAGAGTGTCTAGACTTGTCTCTTAAGCTCTAA

Protein sequence

MSLFTNSSPWLLQQDSQRETKPNPKDKPHHVFSFNLSLNKHKNLEELNLIDTFDNACKEAADQKPRVFSCNYCQRKFFSSQALGGHQNAHSQERKLAKRGFKYPFHSFNRSCFGIQTHSMVLHKPSSLPHKFYRQHGKGGLFRGSFRSRNGGQKASAVAVTSWHDRFSKSKCNELLELECLDLSLKL

Homology

[Close]

BLAST of Lcy12g008030 vs. ExPASy Swiss-Prot
Match: Q42485 (Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.2e-15
Identity = 72/192 (37.50%), Postives = 88/192 (45.83%), Query Frame = 0


Query: 46  ELNLIDTFDNACKEAADQK--------PRVFSCNYCQRKFFSSQALGGHQNAHSQERKLA 105
           ELNLID+F  +    +  +        PRVFSCNYCQRKF+SSQALGGHQNAH +ER LA
Sbjct: 38  ELNLIDSFKTSSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA 97

Query: 106 KRGFKY----------------------------PFHSF--NRSCFGIQTHSMVLHKPS- 165
           KRG  Y                            P H    NRS  GIQ HS  +HKPS 
Sbjct: 98  KRGQYYKMTLSSLPSSAFAFGHGSVSRFASMASLPLHGSVNNRSTLGIQAHS-TIHKPSF 157

Query: 166 ------SLPHKFYRQ-HGK---GGLFRGSFRSR-NGGQKASAVAVTSWHDRFSKSKCNEL 188
                 SL H F +  H K   G +    F     G   ++ VA         KS   + 
Sbjct: 158 LGRQTTSLSHVFKQSIHQKPTIGKMLPEKFHLEVAGNNNSNMVAAKLERIGHFKSNQEDH 217

[Close]

BLAST of Lcy12g008030 vs. ExPASy Swiss-Prot
Match: Q39266 (Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 3.5e-15
Identity = 57/151 (37.75%), Postives = 81/151 (53.64%), Query Frame = 0


Query: 15  DSQRETKPNPKDKPHHVFSFNLSLNKHKNLEELNLIDTFDNACKEA-ADQKPRVFSCNYC 74
           D+ RET  +   +       +   + H +L +L L DTF++  K    +  PRVFSCNYC
Sbjct: 6   DASRETPASRGGEASSNQDLSKPESNHVSL-DLKLNDTFNDDTKSTKCEANPRVFSCNYC 65

Query: 75  QRKFFSSQALGGHQNAHSQERKLAKR--------GFKYPFHSFNRSCFGIQTHSMVLH-- 134
           +RKF+SSQALGGHQNAH +ER +AKR        G  +  +++  S  G+Q HS +LH  
Sbjct: 66  RRKFYSSQALGGHQNAHKRERTMAKRAMHMGRMFGHHHRPYTYTSSSLGMQAHSGLLHHT 125

Query: 135 --KPSSLPHKFYRQHGKGGLFRGSFRSRNGG 153
             +P  L  +F+ Q   G      F   +GG
Sbjct: 126 LSQPQPLVSRFHHQGYFGNTVPLFFDYDDGG 155

[Close]

BLAST of Lcy12g008030 vs. ExPASy Swiss-Prot
Match: Q39262 (Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 3.8e-14
Identity = 49/109 (44.95%), Postives = 59/109 (54.13%), Query Frame = 0


Query: 41  HKNLEELNLIDTFDNAC----KEAADQKPRVFSCNYCQRKFFSSQALGGHQNAHSQERKL 100
           H +  ELNLID  D+      +     + ++FSCNYCQR F+SSQALGGHQNAH +ER L
Sbjct: 30  HNSSHELNLIDCIDDTTSIVNESTTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTL 89

Query: 101 AKRGFK----------------YPFHS--FNRSCFGIQTHSMVLHKPSS 128
           AKRG +                 PFH    N    GIQ HS + HK SS
Sbjct: 90  AKRGQRMAASASAFGHPYGFSPLPFHGQYNNHRSLGIQAHS-ISHKLSS 137

[Close]

BLAST of Lcy12g008030 vs. ExPASy Swiss-Prot
Match: Q39263 (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 71.2 bits (173), Expect = 1.4e-11
Identity = 46/102 (45.10%), Postives = 59/102 (57.84%), Query Frame = 0


Query: 16  SQRETKPNPKDKPHHVFSFNLSL----NKHKNLE------ELNLIDTFDNACKEAADQK- 75
           SQ  +  +P  + +   S NLSL    N + NL+       L L  T +++  E   Q+ 
Sbjct: 18  SQVASNLSPVGEDYKPISLNLSLSFNNNNNNNLDLESSSLTLPLSSTSESSNPEQQQQQQ 77

Query: 76  ----PRVFSCNYCQRKFFSSQALGGHQNAHSQERKLAKRGFK 103
                RVFSCNYCQRKF+SSQALGGHQNAH +ER LAKR  +
Sbjct: 78  PSVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMR 119

[Close]

BLAST of Lcy12g008030 vs. ExPASy Swiss-Prot
Match: Q39261 (Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 4.0e-11
Identity = 39/77 (50.65%), Postives = 49/77 (63.64%), Query Frame = 0


Query: 33  SFNLSLNKHKNLEELNLIDTFDNACKEAAD----------QKPRVFSCNYCQRKFFSSQA 92
           S  LSL  +KN  +LNL    + +   ++           ++PRVFSCNYCQRKF+SSQA
Sbjct: 8   SLRLSLPSYKN-HQLNLELVLEPSSMSSSSSSSTNSSSCLEQPRVFSCNYCQRKFYSSQA 67

Query: 93  LGGHQNAHSQERKLAKR 100
           LGGHQNAH  ER LAK+
Sbjct: 68  LGGHQNAHKLERTLAKK 83

[Close]

BLAST of Lcy12g008030 vs. ExPASy TrEMBL
Match: A0A6J1DKR7 (zinc finger protein 1-like OS=Momordica charantia OX=3673 GN=LOC111021988 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 1.6e-18
Identity = 96/243 (39.51%), Postives = 117/243 (48.15%), Query Frame = 0


Query: 1   MSLFTNSSPWLLQQDSQRETKPNPKDKPHHVFSFNLSLNKHKNL-----EELNLIDTFDN 60
           +SL T+  PWL Q      T+           S +L L+    +     EELNLID+FD 
Sbjct: 16  ISLSTDELPWLRQVSKDISTE----------VSLDLRLSNEDLVGSLMPEELNLIDSFDA 75

Query: 61  AC--------KEAADQKPRVFSCNYCQRKFFSSQALGGHQNAHSQERKLAKRGFK----- 120
            C        KE A  KPRV SCNYCQRKFFSSQALGGHQNAHS++RKLAK G K     
Sbjct: 76  ICLPGTSSQGKEVA--KPRVLSCNYCQRKFFSSQALGGHQNAHSRQRKLAKIGRKLDHVS 135

Query: 121 --YPF--------HSFNRSCFGIQTHSMVLHKPSSLPHKFY------------RQHGKGG 180
             Y F        H FNRS  GIQ H+M+  KP +     +            RQH    
Sbjct: 136 SEYKFSSVSSISLHGFNRS-LGIQAHTMI-QKPCASHAPIFGSFHPSELDVWDRQHLYTK 195

Query: 181 LFRG-----SFRSRNGGQKASA-----------VAVTSWHDRFSKSKCNELLELECLDLS 188
           L  G     SF S +    +S+           ++ TS      K K +EL EL+CLDLS
Sbjct: 196 LAAGRPSPESFLSGDSSVPSSSRGAARFDGGWMLSPTSGSLFNPKHKHDELHELDCLDLS 244

[Close]

BLAST of Lcy12g008030 vs. ExPASy TrEMBL
Match: A0A7J0FZA7 (Zinc finger protein 3 OS=Actinidia rufa OX=165716 GN=Acr_16g0006530 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 2.0e-18
Identity = 59/110 (53.64%), Postives = 69/110 (62.73%), Query Frame = 0


Query: 46  ELNLIDTFDNACKEAADQKPRVFSCNYCQRKFFSSQALGGHQNAHSQERKLAKRGFK--- 105
           ELNLI+ F+     + + +PRVFSCNYCQRKF+SSQALGGHQNAH +ER LAKRG K   
Sbjct: 75  ELNLIECFNKGSSPSHEVEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGHKIDH 134

Query: 106 ------------YPFH-SFNRSCFGIQTHSMVLHKPSSLPHKFYRQHGKG 140
                        P H SFNRS  GIQ HSM+ HKP+ LP      H +G
Sbjct: 135 GAYPQRFASLASLPLHGSFNRS-LGIQVHSMI-HKPTYLPSSIGSSHMQG 182

[Close]

BLAST of Lcy12g008030 vs. ExPASy TrEMBL
Match: A0A2R6QFZ4 (Zinc finger protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc17905 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 2.0e-18
Identity = 59/110 (53.64%), Postives = 69/110 (62.73%), Query Frame = 0


Query: 46  ELNLIDTFDNACKEAADQKPRVFSCNYCQRKFFSSQALGGHQNAHSQERKLAKRGFK--- 105
           ELNLI+ F+     + + +PRVFSCNYCQRKF+SSQALGGHQNAH +ER LAKRG K   
Sbjct: 75  ELNLIECFNKGSSPSHEVEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGHKIDH 134

Query: 106 ------------YPFH-SFNRSCFGIQTHSMVLHKPSSLPHKFYRQHGKG 140
                        P H SFNRS  GIQ HSM+ HKP+ LP      H +G
Sbjct: 135 GAYPQRFASLASLPLHGSFNRS-LGIQVHSMI-HKPTYLPSSIGSSHMQG 182

[Close]

BLAST of Lcy12g008030 vs. ExPASy TrEMBL
Match: A0A6A4KYK1 (C2H2-type domain-containing protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_17746 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 3.8e-17
Identity = 67/158 (42.41%), Postives = 82/158 (51.90%), Query Frame = 0


Query: 13  QQDSQRETKPNPKDKPHHVFSFNLSLNKHKNLEELNLIDTFDNACKEA-------ADQKP 72
           +Q  + E +   +D+   +      LN      ELNL+D  D    +A       +D +P
Sbjct: 18  EQKEEEEEEEEGEDQDQEIGRIPEKLN-----PELNLLDCLDMGSTQASSEIPPGSDSEP 77

Query: 73  RVFSCNYCQRKFFSSQALGGHQNAHSQERKLAKRGFKY---PFHS--------------- 132
           RVFSCNYCQRKFFSSQALGGHQNAH +ER LAKRG K     FHS               
Sbjct: 78  RVFSCNYCQRKFFSSQALGGHQNAHKRERTLAKRGLKIGHSQFHSHSHYSSLASLPLHGA 137

Query: 133 FNRSCFGIQTHSMVLHKPSSLPHK--FYRQHGKGGLFR 144
           +N    GIQ HSM+ HKPS LP+   F   +G  G  R
Sbjct: 138 YNHMPLGIQVHSMI-HKPSYLPNSSGFRGIYGNSGGLR 169

[Close]

BLAST of Lcy12g008030 vs. ExPASy TrEMBL
Match: A0A6J1KC99 (zinc finger protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111492578 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 8.5e-17
Identity = 67/136 (49.26%), Postives = 80/136 (58.82%), Query Frame = 0


Query: 18  RETKPNPKDKPHHVFSFNLSL----NKHKNLEELNLIDTFD-NACKEAAD--QKPRVFSC 77
           +E +   +  P+    F+LSL    + H +  ELNLID FD N   E  D   +PRVFSC
Sbjct: 28  KEDQATDQINPNSQLGFDLSLCNNDSDHGSNPELNLIDCFDANLAAEPTDTETEPRVFSC 87

Query: 78  NYCQRKFFSSQALGGHQNAHSQERKLAKR----------GFKYPFH---------SFNRS 128
           NYCQRKF+SSQALGGHQNAH +ER LAKR          GF + +          SF+RS
Sbjct: 88  NYCQRKFYSSQALGGHQNAHKRERTLAKRTHRVGSGSNFGFAHRYSNLPSLHLHGSFSRS 147

[Close]

BLAST of Lcy12g008030 vs. NCBI nr
Match: KAG6607668.1 (Zinc finger protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 237.7 bits (605), Expect = 8.4e-59
Identity = 131/188 (69.68%), Postives = 145/188 (77.13%), Query Frame = 0


Query: 1   MSLFTNSSPWLLQQDSQRETKPNPKDKPHHVFSFNLSLNKHKNLEELNLIDTFDNACKEA 60
           MSLFTNS  WLLQQDSQ ETK +PKDK H  F+ NL  N   +LEELNLID F +ACKE 
Sbjct: 1   MSLFTNSQ-WLLQQDSQTETKQSPKDKSHQPFTLNLCPNNDNDLEELNLIDIFGHACKEE 60

Query: 61  ADQKPRVFSCNYCQRKFFSSQALGGHQNAHSQERKLAKRGFKYPFHSFNRSCFGIQTHSM 120
           A  +PRVFSCNYCQRKFFSSQALGGHQNAHS+ERKLAK GF+ PFH   RS FG+QT+SM
Sbjct: 61  A-AEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFEDPFHGSYRSSFGVQTNSM 120

Query: 121 VLHKPSSLPHKFYRQHGKGGLFRGSFRSRNGGQKASAVAVTSWHDRFSKS-KCNELLELE 180
           VL        KFYR+HG+G L RGSFRS  GG KASAV V  WH+++SKS K NE LELE
Sbjct: 121 VL-------RKFYRKHGRGELVRGSFRSWRGGWKASAVDVGLWHEQYSKSTKRNESLELE 179

Query: 181 CLDLSLKL 188
           CLDLSLKL
Sbjct: 181 CLDLSLKL 179

[Close]

BLAST of Lcy12g008030 vs. NCBI nr
Match: KAG7028483.1 (Zinc finger protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 237.7 bits (605), Expect = 8.4e-59
Identity = 132/188 (70.21%), Postives = 146/188 (77.66%), Query Frame = 0


Query: 1   MSLFTNSSPWLLQQDSQRETKPNPKDKPHHVFSFNLSLNKHKNLEELNLIDTFDNACKEA 60
           MSLFTNS  WLLQQDSQ ETK +PKDK H  F+ NLS N   +LEELNLID F +ACKE 
Sbjct: 1   MSLFTNSQ-WLLQQDSQTETKQSPKDKSHQPFTLNLSPNNDNDLEELNLIDIFGHACKEE 60

Query: 61  ADQKPRVFSCNYCQRKFFSSQALGGHQNAHSQERKLAKRGFKYPFHSFNRSCFGIQTHSM 120
           A  +PRVFSCNYCQRKFFSSQALGGHQNAHS+ERKLAK GF+ PF    RS FG+QT+SM
Sbjct: 61  A-AEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFEDPFIGCYRSSFGVQTNSM 120

Query: 121 VLHKPSSLPHKFYRQHGKGGLFRGSFRSRNGGQKASAVAVTSWHDRFSKS-KCNELLELE 180
           VL        KFYR+HG+G L RGSFRS  GG KASAV V SWH+++SKS K NE LELE
Sbjct: 121 VL-------RKFYRKHGRGELVRGSFRSWRGGWKASAVDVGSWHEQYSKSTKRNESLELE 179

Query: 181 CLDLSLKL 188
           CLDLSLKL
Sbjct: 181 CLDLSLKL 179

[Close]

BLAST of Lcy12g008030 vs. NCBI nr
Match: XP_022154830.1 (zinc finger protein 1-like [Momordica charantia])

HSP 1 Score: 102.8 bits (255), Expect = 3.2e-18
Identity = 96/243 (39.51%), Postives = 117/243 (48.15%), Query Frame = 0


Query: 1   MSLFTNSSPWLLQQDSQRETKPNPKDKPHHVFSFNLSLNKHKNL-----EELNLIDTFDN 60
           +SL T+  PWL Q      T+           S +L L+    +     EELNLID+FD 
Sbjct: 16  ISLSTDELPWLRQVSKDISTE----------VSLDLRLSNEDLVGSLMPEELNLIDSFDA 75

Query: 61  AC--------KEAADQKPRVFSCNYCQRKFFSSQALGGHQNAHSQERKLAKRGFK----- 120
            C        KE A  KPRV SCNYCQRKFFSSQALGGHQNAHS++RKLAK G K     
Sbjct: 76  ICLPGTSSQGKEVA--KPRVLSCNYCQRKFFSSQALGGHQNAHSRQRKLAKIGRKLDHVS 135

Query: 121 --YPF--------HSFNRSCFGIQTHSMVLHKPSSLPHKFY------------RQHGKGG 180
             Y F        H FNRS  GIQ H+M+  KP +     +            RQH    
Sbjct: 136 SEYKFSSVSSISLHGFNRS-LGIQAHTMI-QKPCASHAPIFGSFHPSELDVWDRQHLYTK 195

Query: 181 LFRG-----SFRSRNGGQKASA-----------VAVTSWHDRFSKSKCNELLELECLDLS 188
           L  G     SF S +    +S+           ++ TS      K K +EL EL+CLDLS
Sbjct: 196 LAAGRPSPESFLSGDSSVPSSSRGAARFDGGWMLSPTSGSLFNPKHKHDELHELDCLDLS 244

[Close]

BLAST of Lcy12g008030 vs. NCBI nr
Match: GFZ04029.1 (zinc finger protein 3 [Actinidia rufa])

HSP 1 Score: 102.4 bits (254), Expect = 4.2e-18
Identity = 59/110 (53.64%), Postives = 69/110 (62.73%), Query Frame = 0


Query: 46  ELNLIDTFDNACKEAADQKPRVFSCNYCQRKFFSSQALGGHQNAHSQERKLAKRGFK--- 105
           ELNLI+ F+     + + +PRVFSCNYCQRKF+SSQALGGHQNAH +ER LAKRG K   
Sbjct: 75  ELNLIECFNKGSSPSHEVEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGHKIDH 134

Query: 106 ------------YPFH-SFNRSCFGIQTHSMVLHKPSSLPHKFYRQHGKG 140
                        P H SFNRS  GIQ HSM+ HKP+ LP      H +G
Sbjct: 135 GAYPQRFASLASLPLHGSFNRS-LGIQVHSMI-HKPTYLPSSIGSSHMQG 182

[Close]

BLAST of Lcy12g008030 vs. NCBI nr
Match: PSS07557.1 (Zinc finger protein [Actinidia chinensis var. chinensis])

HSP 1 Score: 102.4 bits (254), Expect = 4.2e-18
Identity = 59/110 (53.64%), Postives = 69/110 (62.73%), Query Frame = 0


Query: 46  ELNLIDTFDNACKEAADQKPRVFSCNYCQRKFFSSQALGGHQNAHSQERKLAKRGFK--- 105
           ELNLI+ F+     + + +PRVFSCNYCQRKF+SSQALGGHQNAH +ER LAKRG K   
Sbjct: 75  ELNLIECFNKGSSPSHEVEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGHKIDH 134

Query: 106 ------------YPFH-SFNRSCFGIQTHSMVLHKPSSLPHKFYRQHGKG 140
                        P H SFNRS  GIQ HSM+ HKP+ LP      H +G
Sbjct: 135 GAYPQRFASLASLPLHGSFNRS-LGIQVHSMI-HKPTYLPSSIGSSHMQG 182

[Close]

BLAST of Lcy12g008030 vs. TAIR 10
Match: AT1G80730.1 (zinc-finger protein 1 )

HSP 1 Score: 84.7 bits (208), Expect = 8.4e-17
Identity = 72/192 (37.50%), Postives = 88/192 (45.83%), Query Frame = 0


Query: 46  ELNLIDTFDNACKEAADQK--------PRVFSCNYCQRKFFSSQALGGHQNAHSQERKLA 105
           ELNLID+F  +    +  +        PRVFSCNYCQRKF+SSQALGGHQNAH +ER LA
Sbjct: 38  ELNLIDSFKTSSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA 97

Query: 106 KRGFKY----------------------------PFHSF--NRSCFGIQTHSMVLHKPS- 165
           KRG  Y                            P H    NRS  GIQ HS  +HKPS 
Sbjct: 98  KRGQYYKMTLSSLPSSAFAFGHGSVSRFASMASLPLHGSVNNRSTLGIQAHS-TIHKPSF 157

Query: 166 ------SLPHKFYRQ-HGK---GGLFRGSFRSR-NGGQKASAVAVTSWHDRFSKSKCNEL 188
                 SL H F +  H K   G +    F     G   ++ VA         KS   + 
Sbjct: 158 LGRQTTSLSHVFKQSIHQKPTIGKMLPEKFHLEVAGNNNSNMVAAKLERIGHFKSNQEDH 217

[Close]

BLAST of Lcy12g008030 vs. TAIR 10
Match: AT1G24625.1 (zinc finger protein 7 )

HSP 1 Score: 83.2 bits (204), Expect = 2.5e-16
Identity = 57/151 (37.75%), Postives = 81/151 (53.64%), Query Frame = 0


Query: 15  DSQRETKPNPKDKPHHVFSFNLSLNKHKNLEELNLIDTFDNACKEA-ADQKPRVFSCNYC 74
           D+ RET  +   +       +   + H +L +L L DTF++  K    +  PRVFSCNYC
Sbjct: 6   DASRETPASRGGEASSNQDLSKPESNHVSL-DLKLNDTFNDDTKSTKCEANPRVFSCNYC 65

Query: 75  QRKFFSSQALGGHQNAHSQERKLAKR--------GFKYPFHSFNRSCFGIQTHSMVLH-- 134
           +RKF+SSQALGGHQNAH +ER +AKR        G  +  +++  S  G+Q HS +LH  
Sbjct: 66  RRKFYSSQALGGHQNAHKRERTMAKRAMHMGRMFGHHHRPYTYTSSSLGMQAHSGLLHHT 125

Query: 135 --KPSSLPHKFYRQHGKGGLFRGSFRSRNGG 153
             +P  L  +F+ Q   G      F   +GG
Sbjct: 126 LSQPQPLVSRFHHQGYFGNTVPLFFDYDDGG 155

[Close]

BLAST of Lcy12g008030 vs. TAIR 10
Match: AT5G10970.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 80.1 bits (196), Expect = 2.1e-15
Identity = 47/104 (45.19%), Postives = 60/104 (57.69%), Query Frame = 0


Query: 45  EELNLIDTFDN-----ACKEAADQKPRVFSCNYCQRKFFSSQALGGHQNAHSQERKLAKR 104
           +ELNL+D  +      +   +   + ++FSCNYCQR F+SSQALGGHQNAH +ER LAKR
Sbjct: 76  QELNLLDCLETGVVTPSFNGSTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKR 135

Query: 105 GFK---------------YPFH-SFNRSCFGIQTHSMVLHKPSS 128
           G +                PFH  ++    GIQ HSM  HKPSS
Sbjct: 136 GQRMASAAAFGHPYGFAPVPFHGQYSNRTLGIQAHSM-SHKPSS 178

[Close]

BLAST of Lcy12g008030 vs. TAIR 10
Match: AT5G25160.1 (zinc finger protein 3 )

HSP 1 Score: 79.7 bits (195), Expect = 2.7e-15
Identity = 49/109 (44.95%), Postives = 59/109 (54.13%), Query Frame = 0


Query: 41  HKNLEELNLIDTFDNAC----KEAADQKPRVFSCNYCQRKFFSSQALGGHQNAHSQERKL 100
           H +  ELNLID  D+      +     + ++FSCNYCQR F+SSQALGGHQNAH +ER L
Sbjct: 30  HNSSHELNLIDCIDDTTSIVNESTTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTL 89

Query: 101 AKRGFK----------------YPFHS--FNRSCFGIQTHSMVLHKPSS 128
           AKRG +                 PFH    N    GIQ HS + HK SS
Sbjct: 90  AKRGQRMAASASAFGHPYGFSPLPFHGQYNNHRSLGIQAHS-ISHKLSS 137

[Close]

BLAST of Lcy12g008030 vs. TAIR 10
Match: AT1G66140.1 (zinc finger protein 4 )

HSP 1 Score: 71.2 bits (173), Expect = 9.7e-13
Identity = 46/102 (45.10%), Postives = 59/102 (57.84%), Query Frame = 0


Query: 16  SQRETKPNPKDKPHHVFSFNLSL----NKHKNLE------ELNLIDTFDNACKEAADQK- 75
           SQ  +  +P  + +   S NLSL    N + NL+       L L  T +++  E   Q+ 
Sbjct: 18  SQVASNLSPVGEDYKPISLNLSLSFNNNNNNNLDLESSSLTLPLSSTSESSNPEQQQQQQ 77

Query: 76  ----PRVFSCNYCQRKFFSSQALGGHQNAHSQERKLAKRGFK 103
                RVFSCNYCQRKF+SSQALGGHQNAH +ER LAKR  +
Sbjct: 78  PSVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMR 119

The following BLAST results are available for this feature:

BLAST of Lcy12g008030 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q42485	1.2e-15	37.50	Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1	[more]
Q39266	3.5e-15	37.75	Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1	[more]
Q39262	3.8e-14	44.95	Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1	[more]
Q39263	1.4e-11	45.10	Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2	[more]
Q39261	4.0e-11	50.65	Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1	[more]

BLAST of Lcy12g008030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DKR7	1.6e-18	39.51	zinc finger protein 1-like OS=Momordica charantia OX=3673 GN=LOC111021988 PE=4 S...	[more]
A0A7J0FZA7	2.0e-18	53.64	Zinc finger protein 3 OS=Actinidia rufa OX=165716 GN=Acr_16g0006530 PE=4 SV=1	[more]
A0A2R6QFZ4	2.0e-18	53.64	Zinc finger protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Ac...	[more]
A0A6A4KYK1	3.8e-17	42.41	C2H2-type domain-containing protein (Fragment) OS=Rhododendron williamsianum OX=...	[more]
A0A6J1KC99	8.5e-17	49.26	zinc finger protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111492578 PE=4 SV=1	[more]

BLAST of Lcy12g008030 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6607668.1	8.4e-59	69.68	Zinc finger protein 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7028483.1	8.4e-59	70.21	Zinc finger protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022154830.1	3.2e-18	39.51	zinc finger protein 1-like [Momordica charantia]	[more]
GFZ04029.1	4.2e-18	53.64	zinc finger protein 3 [Actinidia rufa]	[more]
PSS07557.1	4.2e-18	53.64	Zinc finger protein [Actinidia chinensis var. chinensis]	[more]

BLAST of Lcy12g008030 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80730.1	8.4e-17	37.50	zinc-finger protein 1	[more]
AT1G24625.1	2.5e-16	37.75	zinc finger protein 7	[more]
AT5G10970.1	2.1e-15	45.19	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT5G25160.1	2.7e-15	44.95	zinc finger protein 3	[more]
AT1G66140.1	9.7e-13	45.10	zinc finger protein 4	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 50..106 e-value: 3.4E-6 score: 28.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	PANTHER	PTHR47287:SF1	ZINC FINGER PROTEIN 1-LIKE	coord: 15..102
IPR044246	Zinc finger protein 3-like	PANTHER	PTHR47287	C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN	coord: 15..102
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 70..90
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 68..95 score: 11.738611
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 65..95

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy12g008030.1	Lcy12g008030.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009788	negative regulation of abscisic acid-activated signaling pathway