Lcy12g007960 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy12g007960
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	PsbP domain-containing protein
Location	Chr12: 33388630 .. 33391109 (-)
RNA-Seq Expression	Lcy12g007960
Synteny	Lcy12g007960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAAGCTATGGTCCACTCAACAATTCCGCACCACATCCACACAAAATTAAAGAACCAAATCCCTCTCTCGATCTCCCAATTTCTAAACTCTTCCATTCCCACTTCTCAGTTCGATCCGCTGAACTTCTCCATTTCTCGATTCTCCAATTCGTCTCCAGAAATCATCGTTTCTGGTTTCGAATGGGAACCACATTGTTCACGAGTTGCAGATTCTCCTGCAACTTTCACCAGCCAAAGCTTCCTTCTCACATTCTCCATCCTCAATCTTTGCTCGAAAGGGGGGTTTCGGTCGTCGATGGGGAAAAGGAGAAGCTATCTGCGATTTTGAATCGGAGATCGGTTTTGGTATCGGGGGTTTCCTTGGTTTCATCTGCGGCTTTGGGGCTGCAGAAGGAGTGTTCGGCTGCGGTCAAGCAAGGTCTTCTAGCGGGGAGGATTCCTGGGTTGTCTGAACCAGATGAACAGGGTTGGTTTTTCTTAACTCTCAACTCCGGAAAGTTATATCCAAGTATCCATACTGTGGTTGCCATTTCTAGTTGAGATGTGTGATTTCTGGTTGCCATTTCATTTTGACCATTGAATGCTTTGAAACTGCTTTCCCTTTTCATCTCAAGCTTAGCATATCTGGTTTCTTGTTTGTTGCCTGCTCAGACAGGTTGGAGGACATATCGTAGACCCGACGAGAAGTCCGGTGGGCATGGGGTTGGATGGAGTCCTATTATTCCTTATGCCTTTTCAGTTCCACAAGATTGGGAAGAGGTACATGCTGTTTGACATTCCCCTATTGACCTGATGCTGATGCAAAACTACAAAAGAAATAACTGGTTTCTACTTCAATCAGCTTCTTCATTAGATGAAAAACTACTCAAATTAGATCAACCTTTAAACTTATAAGATATTAGCATGGCTTGTTAGGCTGGTCCTTTGGGTGGGTTTGTAGCCTAGTTCGTGGAATAAAGCCTCCAAGTCGAAAGATGAATATATAAAAAGAAAATTGAAGATGGCCATCTAACTAGGATTTTTTGAAATCCTATGGTTTCTTGATATCTTTTGGAATTTGCATTTGGGGCACATAACGATGCTAGTTGATTAGTGGGGTGTGGTCGTGATATGAACCGGAATAGAACCACAATGTATTACGATATAAAAGGAAAGTACTACACGATAAGCCCAAGTATTCGAGGTACTTGGCCCTCCTTTTCTTGAGATCACTCAAGATCTAACTCACTGACTTAATTCCCTCCCTCCCTTCCCCTTTCCCGTTCCCTCTACTTATAACTCCATACTCTAACCAACTCCCTAACTAACTGCTAATATACCCTTACCAATATTCCTAATTACACCTTAGGTACATTCCTATCAGGTCGGTATATATAAACATGGTAAGATCCATGGATATCTATTCCCAATTTATTTATCTGCTTGGAATATAAAATTTTCATGCTAGTTGGATACCTCTATCTATGATAGTTAGTTTCGTTTTCATCTTGATTAAAGCATACTTGATACAATGTGCATTTTTGTTACAGGTTCCTGTATCAATTGCTGATCTTGGTGGGACTGAGATTGATCTCAGATTTGGAAGCTCAAAGGAAGGTCGACTGTTTGTTATCGTTGCGCCTGTTCGTCGATTCTCCGATGGTGCATTTCCCCGAAATTTTATGCTTCTTGTTCAGTTTTCCATTTCAAAGGAACTATATTGTACTCACTCTTCTGTGACTAACTGATGTTCTTATTGTCACTGTCCTGTGAAGTAATCGGCGAAGATGCAACCATTGAAATGGTTGGGCCTCCAGAGAAAGTAATCAGCGCATTCGGACCGGAAGTGATCGGTGAAAATGTAGAAGGAAAGGTGATCGACATGAGCGTGGCAGAGCATTCTGGAAGAACATATTATCAGTTTGAATTGGAGCCTCCTCATGTTTTAATCACGGCGACAGCGGCGGGAAATCGTCTCTATCTATTCAATGTAACAGCAAATGGTAAGCTGATATGATTTGGTTTACATTACAAAAGAAACCAATTGTTTTCCATTAAAACTGAAAGAAGCATTTGTTTTCTCTTGGGTTCTTACAGGTCTACAATGGAAGAGACATTACAGCGACTTGAAAAGGATAGCAAATTCTTTTCGCGTCGTATGATGAAGTCGTTTCGGAGCTGAAGGTGAACTATACATATACAGTGTGATTTACAGAGCAACAGTTGCTTAAGCCTTGTGATGGTTCCTCTGTAGTGTTAAAGCCTTAAGGTTTTTGCTTGATTTATTGCCTCTGTGTAATCATATGTTCATGCTTCTTACTTGGTGGCAAAGACATGGCTGTGATATACACAGTTGTAGTTGTATGTATTAACAAGAGAGAATTAGAGTTATGATGTGAAATAATTGCAGTTGAAGGGTTGATGAAAAATTTTAATGTTCAACCAGACCAAATTGTAAGATCAATAATAAAAACAATGTTAAAAAAGGAGCTGCAACA

mRNA sequence

ATGCAAAGCTATGGTCCACTCAACAATTCCGCACCACATCCACACAAAATTAAAGAACCAAATCCCTCTCTCGATCTCCCAATTTCTAAACTCTTCCATTCCCACTTCTCAGTTCGATCCGCTGAACTTCTCCATTTCTCGATTCTCCAATTCGTCTCCAGAAATCATCGTTTCTGGTTTCGAATGGGAACCACATTGTTCACGAGTTGCAGATTCTCCTGCAACTTTCACCAGCCAAAGCTTCCTTCTCACATTCTCCATCCTCAATCTTTGCTCGAAAGGGGGGTTTCGGTCGTCGATGGGGAAAAGGAGAAGCTATCTGCGATTTTGAATCGGAGATCGGTTTTGGTATCGGGGGTTTCCTTGGTTTCATCTGCGGCTTTGGGGCTGCAGAAGGAGTGTTCGGCTGCGGTCAAGCAAGGTCTTCTAGCGGGGAGGATTCCTGGGTTGTCTGAACCAGATGAACAGGGTTGGAGGACATATCGTAGACCCGACGAGAAGTCCGGTGGGCATGGGGTTGGATGGAGTCCTATTATTCCTTATGCCTTTTCAGTTCCACAAGATTGGGAAGAGGTTCCTGTATCAATTGCTGATCTTGGTGGGACTGAGATTGATCTCAGATTTGGAAGCTCAAAGGAAGGTCGACTGTTTGTTATCGTTGCGCCTGTTCGTCGATTCTCCGATGTAATCGGCGAAGATGCAACCATTGAAATGGTTGGGCCTCCAGAGAAAGTAATCAGCGCATTCGGACCGGAAGTGATCGGTGAAAATGTAGAAGGAAAGGTGATCGACATGAGCGTGGCAGAGCATTCTGGAAGAACATATTATCAGTTTGAATTGGAGCCTCCTCATGTTTTAATCACGGCGACAGCGGCGGGAAATCGTCTCTATCTATTCAATGTAACAGCAAATGGTCTACAATGGAAGAGACATTACAGCGACTTGAAAAGGATAGCAAATTCTTTTCGCGTCGTATGATGAAGTCGTTTCGGAGCTGAAGGTGAACTATACATATACAGTGTGATTTACAGAGCAACAGTTGCTTAAGCCTTGTGATGGTTCCTCTGTAGTGTTAAAGCCTTAAGGTTTTTGCTTGATTTATTGCCTCTGTGTAATCATATGTTCATGCTTCTTACTTGGTGGCAAAGACATGGCTGTGATATACACAGTTGTAGTTGTATGTATTAACAAGAGAGAATTAGAGTTATGATGTGAAATAATTGCAGTTGAAGGGTTGATGAAAAATTTTAATGTTCAACCAGACCAAATTGTAAGATCAATAATAAAAACAATGTTAAAAAAGGAGCTGCAACA

Coding sequence (CDS)

ATGCAAAGCTATGGTCCACTCAACAATTCCGCACCACATCCACACAAAATTAAAGAACCAAATCCCTCTCTCGATCTCCCAATTTCTAAACTCTTCCATTCCCACTTCTCAGTTCGATCCGCTGAACTTCTCCATTTCTCGATTCTCCAATTCGTCTCCAGAAATCATCGTTTCTGGTTTCGAATGGGAACCACATTGTTCACGAGTTGCAGATTCTCCTGCAACTTTCACCAGCCAAAGCTTCCTTCTCACATTCTCCATCCTCAATCTTTGCTCGAAAGGGGGGTTTCGGTCGTCGATGGGGAAAAGGAGAAGCTATCTGCGATTTTGAATCGGAGATCGGTTTTGGTATCGGGGGTTTCCTTGGTTTCATCTGCGGCTTTGGGGCTGCAGAAGGAGTGTTCGGCTGCGGTCAAGCAAGGTCTTCTAGCGGGGAGGATTCCTGGGTTGTCTGAACCAGATGAACAGGGTTGGAGGACATATCGTAGACCCGACGAGAAGTCCGGTGGGCATGGGGTTGGATGGAGTCCTATTATTCCTTATGCCTTTTCAGTTCCACAAGATTGGGAAGAGGTTCCTGTATCAATTGCTGATCTTGGTGGGACTGAGATTGATCTCAGATTTGGAAGCTCAAAGGAAGGTCGACTGTTTGTTATCGTTGCGCCTGTTCGTCGATTCTCCGATGTAATCGGCGAAGATGCAACCATTGAAATGGTTGGGCCTCCAGAGAAAGTAATCAGCGCATTCGGACCGGAAGTGATCGGTGAAAATGTAGAAGGAAAGGTGATCGACATGAGCGTGGCAGAGCATTCTGGAAGAACATATTATCAGTTTGAATTGGAGCCTCCTCATGTTTTAATCACGGCGACAGCGGCGGGAAATCGTCTCTATCTATTCAATGTAACAGCAAATGGTCTACAATGGAAGAGACATTACAGCGACTTGAAAAGGATAGCAAATTCTTTTCGCGTCGTATGA

Protein sequence

MQSYGPLNNSAPHPHKIKEPNPSLDLPISKLFHSHFSVRSAELLHFSILQFVSRNHRFWFRMGTTLFTSCRFSCNFHQPKLPSHILHPQSLLERGVSVVDGEKEKLSAILNRRSVLVSGVSLVSSAALGLQKECSAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQDWEEVPVSIADLGGTEIDLRFGSSKEGRLFVIVAPVRRFSDVIGEDATIEMVGPPEKVISAFGPEVIGENVEGKVIDMSVAEHSGRTYYQFELEPPHVLITATAAGNRLYLFNVTANGLQWKRHYSDLKRIANSFRVV

Homology

[Close]

BLAST of Lcy12g007960 vs. ExPASy Swiss-Prot
Match: O49292 (PsbP domain-containing protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPD4 PE=1 SV=2)

HSP 1 Score: 354.8 bits (909), Expect = 1.1e-96
Identity = 173/224 (77.23%), Postives = 193/224 (86.16%), Query Frame = 0


Query: 102 EKEKLSAILNRRSVLVSGVSLVSSAALGLQKECSAAVKQGLLAGRIPGLSEPDEQGWRTY 161
           E E  + +L+RRSV+ SG+ + S+ AL   +E  A VKQGLLAGR+PGLSEPDE+GWRTY
Sbjct: 38  EDEWCARVLSRRSVMASGL-VSSTTALAFPREGLAVVKQGLLAGRVPGLSEPDEEGWRTY 97

Query: 162 RRPDEKSGGHGVGWSPIIPYAFSVPQDWEEVPVSIADLGGTEIDLRFGSSKEGRLFVIVA 221
           RRPDEKSGGHGVGWSPIIPYAFSVPQDW EVPVSIADLGGTEIDLRF S KEGRL VIVA
Sbjct: 98  RRPDEKSGGHGVGWSPIIPYAFSVPQDWNEVPVSIADLGGTEIDLRFASPKEGRLSVIVA 157

Query: 222 PVRRFSDVIGEDATIEMVGPPEKVISAFGPEVIGENVEGKVIDMSVAEHSGRTYYQFELE 281
           PV RF+D +G+D  IE +G P KVI+AFGPEVIGENVEGKV+  +VAEH GR YYQFELE
Sbjct: 158 PVLRFADNLGDDVKIENIGQPAKVINAFGPEVIGENVEGKVLSSNVAEHDGRLYYQFELE 217

Query: 282 PPHVLITATAAGNRLYLFNVTANGLQWKRHYSDLKRIANSFRVV 326
           PPHVLITATAAGNRLYLF+VT NGLQWKRHY DLKRIA+SFR+V
Sbjct: 218 PPHVLITATAAGNRLYLFSVTGNGLQWKRHYKDLKRIASSFRIV 260

[Close]

BLAST of Lcy12g007960 vs. ExPASy Swiss-Prot
Match: Q9LXX5 (PsbP domain-containing protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPD6 PE=1 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.6e-15
Identity = 50/160 (31.25%), Postives = 91/160 (56.88%), Query Frame = 0


Query: 180 PYAFSVPQDWEEVPVSIADLGG--------TEIDLRFGSSKEGRLFVIVAPVRRFSDVIG 239
           PY F +P +W+++ ++    G           I+++F + K+G++ V+ +P+ R ++   
Sbjct: 105 PYQFVLPPNWKQLRIANILSGNYCQPKCAEPWIEVKFENEKQGKVQVVASPLIRLTN--K 164

Query: 240 EDATIEMVGPPEKVISAFGPEVIGENVEG-KVIDMSVAEHSGRTYYQFELEPP------H 299
            +ATIE +G PEKVI++ GP V G + +  +++  S+ +   +TYY++ LE P      H
Sbjct: 165 PNATIEDLGEPEKVIASLGPFVTGNSYDSDELLKTSIEKIGDQTYYKYVLETPFALTGSH 224

Query: 300 VLITATAAGNRLYLFNVTANGLQWKRHYSDLKRIANSFRV 325
            L  ATA G+ + LF V+A   QW+     L+ I +SF++
Sbjct: 225 NLAKATAKGSTVVLFVVSATEKQWQSSQKTLEAILDSFQL 262

[Close]

BLAST of Lcy12g007960 vs. ExPASy Swiss-Prot
Match: P82538 (PsbP-like protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPL1 PE=1 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 3.3e-05
Identity = 40/153 (26.14%), Postives = 63/153 (41.18%), Query Frame = 0


Query: 181 YAFSVPQDWEEVPVSIADLGGTEIDLRFGSSKEGRLFVIVAPVRRFSD--VIGEDATIEM 240
           YAF  P  W+EV +              G  K  +   ++ P+   S   V     TI+ 
Sbjct: 91  YAFLYPFGWQEVVIE-------------GQDKVYK--DVIEPLESVSVNLVPTSKQTIKE 150

Query: 241 VGPPEKVISAFGPEVIG-ENVEGKVIDMSVAEHSGRTYYQFELE------PPHVLITATA 300
            GPP+++      +V+   N +  +ID S  +  G+TYYQFE          H L T T 
Sbjct: 151 FGPPKQIAETLIKKVLAPPNQKTTLIDASEHDVDGKTYYQFEFTVQARNYTRHALGTITV 210

Query: 301 AGNRLYLFNVTANGLQWKRHYSDLKRIANSFRV 325
                Y     AN  +W++    L  + +SF++
Sbjct: 211 FNGNFYTLTTGANERRWEKMKDRLHTVVDSFKI 228

[Close]

BLAST of Lcy12g007960 vs. ExPASy TrEMBL
Match: A0A6J1DKA3 (psbP domain-containing protein 4, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111021699 PE=4 SV=1)

HSP 1 Score: 467.2 bits (1201), Expect = 5.5e-128
Identity = 230/264 (87.12%), Postives = 242/264 (91.67%), Query Frame = 0


Query: 62  MGTTLFTSCRFSCNFHQPKLPSHILHPQSLLERGVSVVDGEKEKLSAILNRRSVLVSGVS 121
           MGT+LFTS RFSCNFH PKLPS ILHPQS     +SV DGE ++    LNRRS+L SG+S
Sbjct: 1   MGTSLFTSYRFSCNFHHPKLPSPILHPQS-----ISVADGENQRPLGDLNRRSILASGIS 60

Query: 122 LVSSAALGLQKECSAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPY 181
           L+S+A LGL   C AAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPY
Sbjct: 61  LLSTAPLGLHDHCLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPY 120

Query: 182 AFSVPQDWEEVPVSIADLGGTEIDLRFGSSKEGRLFVIVAPVRRFSDVIGEDATIEMVGP 241
            FSVPQDWEEVPVSIADLGGTEIDLRFGSSKEGRLFVIVAPVRRFSDVIGEDATIEMVGP
Sbjct: 121 VFSVPQDWEEVPVSIADLGGTEIDLRFGSSKEGRLFVIVAPVRRFSDVIGEDATIEMVGP 180

Query: 242 PEKVISAFGPEVIGENVEGKVIDMSVAEHSGRTYYQFELEPPHVLITATAAGNRLYLFNV 301
           PEKVI+AFGPEVIGENVEGKVI+M+VAEHSGRTYYQFELEPPHVLITATAAGNRLYLFNV
Sbjct: 181 PEKVINAFGPEVIGENVEGKVINMNVAEHSGRTYYQFELEPPHVLITATAAGNRLYLFNV 240

Query: 302 TANGLQWKRHYSDLKRIANSFRVV 326
           TANGLQWKRHY DLKRIA+SFRVV
Sbjct: 241 TANGLQWKRHYGDLKRIADSFRVV 259

[Close]

BLAST of Lcy12g007960 vs. ExPASy TrEMBL
Match: A0A6J1FDH1 (psbP domain-containing protein 4, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111443110 PE=4 SV=1)

HSP 1 Score: 458.8 bits (1179), Expect = 1.9e-125
Identity = 228/264 (86.36%), Postives = 242/264 (91.67%), Query Frame = 0


Query: 62  MGTTLFTSCRFSCNFHQPKLPSHILHPQSLLERGVSVVDGEKEKLSAILNRRSVLVSGVS 121
           MG+T+F S  FSCNFHQ K PSHI      L++GV  V GEK+  S ILNRRSVL+SGVS
Sbjct: 1   MGSTMFASVPFSCNFHQSKPPSHI------LQKGVPAVGGEKDNRSPILNRRSVLLSGVS 60

Query: 122 LVSSAALGLQKECSAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPY 181
           LVSSA LGLQ EC AAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPY
Sbjct: 61  LVSSAGLGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPY 120

Query: 182 AFSVPQDWEEVPVSIADLGGTEIDLRFGSSKEGRLFVIVAPVRRFSDVIGEDATIEMVGP 241
           AFSVPQDWEEVPVSIADLGGTEIDLRF SSKEGRLFVIVAPV+RFSDVIG+DATIEMVGP
Sbjct: 121 AFSVPQDWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIEMVGP 180

Query: 242 PEKVISAFGPEVIGENVEGKVIDMSVAEHSGRTYYQFELEPPHVLITATAAGNRLYLFNV 301
           PEKVISAFGPEVIGENVEGKV++MSVAEH+GRTYYQFELEPPHVLITATAAGNRLYLF+V
Sbjct: 181 PEKVISAFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLYLFSV 240

Query: 302 TANGLQWKRHYSDLKRIANSFRVV 326
           T NGLQWKRH+SDLKRIA+SFRVV
Sbjct: 241 TGNGLQWKRHFSDLKRIADSFRVV 258

[Close]

BLAST of Lcy12g007960 vs. ExPASy TrEMBL
Match: A0A6J1IFH3 (psbP domain-containing protein 4, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111473925 PE=4 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 5.7e-125
Identity = 228/264 (86.36%), Postives = 241/264 (91.29%), Query Frame = 0


Query: 62  MGTTLFTSCRFSCNFHQPKLPSHILHPQSLLERGVSVVDGEKEKLSAILNRRSVLVSGVS 121
           MG+T+F +  FSCNFHQ K PS I      L++GV  V GEKE  S ILNRRSVL+SGVS
Sbjct: 1   MGSTMFATVPFSCNFHQSKPPSQI------LQKGVPAVGGEKENRSPILNRRSVLLSGVS 60

Query: 122 LVSSAALGLQKECSAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPY 181
           LVSSA LGLQ EC AAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPY
Sbjct: 61  LVSSAGLGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPY 120

Query: 182 AFSVPQDWEEVPVSIADLGGTEIDLRFGSSKEGRLFVIVAPVRRFSDVIGEDATIEMVGP 241
           AFSVPQDWEEVPVSIADLGGTEIDLRF SSKEGRLFVIVAPV+RFSDVIG+DATIEMVGP
Sbjct: 121 AFSVPQDWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIEMVGP 180

Query: 242 PEKVISAFGPEVIGENVEGKVIDMSVAEHSGRTYYQFELEPPHVLITATAAGNRLYLFNV 301
           PEKVISAFGPEVIGENVEGKV++MSVAEH+GRTYYQFELEPPHVLITATAAGNRLYLF+V
Sbjct: 181 PEKVISAFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLYLFSV 240

Query: 302 TANGLQWKRHYSDLKRIANSFRVV 326
           T NGLQWKRHYSDLKRIA+SFRVV
Sbjct: 241 TGNGLQWKRHYSDLKRIADSFRVV 258

[Close]

BLAST of Lcy12g007960 vs. ExPASy TrEMBL
Match: A0A0A0K501 (PsbP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G322590 PE=4 SV=1)

HSP 1 Score: 440.3 bits (1131), Expect = 7.2e-120
Identity = 222/267 (83.15%), Postives = 234/267 (87.64%), Query Frame = 0


Query: 62  MGTTLFTSCRFSCNFHQPKLPSHILHPQSLLERGVSVVDGEKEK---LSAILNRRSVLVS 121
           MGTTLF +  FS  FH   LPS  L P   L + VS V G   +    S  LNRR  LVS
Sbjct: 1   MGTTLFITNPFSSIFHHQYLPSPHLPPHHFLPKRVSAVHGAHNQNPISSTALNRRWALVS 60

Query: 122 GVSLVSSAALGLQKECSAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPI 181
           GVSL+SSAALGLQ +C AAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPI
Sbjct: 61  GVSLLSSAALGLQNDCLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPI 120

Query: 182 IPYAFSVPQDWEEVPVSIADLGGTEIDLRFGSSKEGRLFVIVAPVRRFSDVIGEDATIEM 241
           IPYAFSVPQDWEEVPVSIADLGGTEIDLRFGS KEGR+FV+VAPVRRFSDVIGEDATIEM
Sbjct: 121 IPYAFSVPQDWEEVPVSIADLGGTEIDLRFGSLKEGRVFVVVAPVRRFSDVIGEDATIEM 180

Query: 242 VGPPEKVISAFGPEVIGENVEGKVIDMSVAEHSGRTYYQFELEPPHVLITATAAGNRLYL 301
           VGPPEKVI+AFGPEVIGENVEGKVI MSVAEHSGRTYYQFELEPPHV+ITATAAGNRLYL
Sbjct: 181 VGPPEKVINAFGPEVIGENVEGKVISMSVAEHSGRTYYQFELEPPHVIITATAAGNRLYL 240

Query: 302 FNVTANGLQWKRHYSDLKRIANSFRVV 326
           FNVTANGLQWKRHY+DLKRIA+SFR+V
Sbjct: 241 FNVTANGLQWKRHYNDLKRIADSFRIV 267

[Close]

BLAST of Lcy12g007960 vs. ExPASy TrEMBL
Match: A0A5A7T2U1 (PsbP domain-containing protein 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1784G00200 PE=4 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 2.7e-119
Identity = 225/268 (83.96%), Postives = 235/268 (87.69%), Query Frame = 0


Query: 62  MGTT-LFTSCRFSCNFHQPKLPSHILHPQSLLERGVSVV---DGEKEKLSAILNRRSVLV 121
           MGTT LF +  FS  FHQ  LPS +LHP   L + VS +     +    S  L RR VLV
Sbjct: 1   MGTTALFITNPFSSIFHQQNLPSPLLHPHRFLPKRVSALHRAHNQNPISSPALIRRWVLV 60

Query: 122 SGVSLVSSAALGLQKECSAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSP 181
           SGVSL+SSAALGLQ EC AAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSP
Sbjct: 61  SGVSLLSSAALGLQNECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSP 120

Query: 182 IIPYAFSVPQDWEEVPVSIADLGGTEIDLRFGSSKEGRLFVIVAPVRRFSDVIGEDATIE 241
           IIPYAFSVPQDWEEVPVSIADLGGTEIDLRFGS KEGRLFVIVAPVRRFSDVIGEDATIE
Sbjct: 121 IIPYAFSVPQDWEEVPVSIADLGGTEIDLRFGSLKEGRLFVIVAPVRRFSDVIGEDATIE 180

Query: 242 MVGPPEKVISAFGPEVIGENVEGKVIDMSVAEHSGRTYYQFELEPPHVLITATAAGNRLY 301
           MVGPPEKVI+AFGPEVIGENVEGKVI MSVAE+SGRTYYQFELEPPHV+ITATAAGNRLY
Sbjct: 181 MVGPPEKVINAFGPEVIGENVEGKVISMSVAEYSGRTYYQFELEPPHVIITATAAGNRLY 240

Query: 302 LFNVTANGLQWKRHYSDLKRIANSFRVV 326
           LFNVTANGLQWKRHY DLKRIA+SFRVV
Sbjct: 241 LFNVTANGLQWKRHYKDLKRIADSFRVV 268

[Close]

BLAST of Lcy12g007960 vs. NCBI nr
Match: XP_022154428.1 (psbP domain-containing protein 4, chloroplastic [Momordica charantia])

HSP 1 Score: 467.2 bits (1201), Expect = 1.1e-127
Identity = 230/264 (87.12%), Postives = 242/264 (91.67%), Query Frame = 0


Query: 62  MGTTLFTSCRFSCNFHQPKLPSHILHPQSLLERGVSVVDGEKEKLSAILNRRSVLVSGVS 121
           MGT+LFTS RFSCNFH PKLPS ILHPQS     +SV DGE ++    LNRRS+L SG+S
Sbjct: 1   MGTSLFTSYRFSCNFHHPKLPSPILHPQS-----ISVADGENQRPLGDLNRRSILASGIS 60

Query: 122 LVSSAALGLQKECSAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPY 181
           L+S+A LGL   C AAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPY
Sbjct: 61  LLSTAPLGLHDHCLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPY 120

Query: 182 AFSVPQDWEEVPVSIADLGGTEIDLRFGSSKEGRLFVIVAPVRRFSDVIGEDATIEMVGP 241
            FSVPQDWEEVPVSIADLGGTEIDLRFGSSKEGRLFVIVAPVRRFSDVIGEDATIEMVGP
Sbjct: 121 VFSVPQDWEEVPVSIADLGGTEIDLRFGSSKEGRLFVIVAPVRRFSDVIGEDATIEMVGP 180

Query: 242 PEKVISAFGPEVIGENVEGKVIDMSVAEHSGRTYYQFELEPPHVLITATAAGNRLYLFNV 301
           PEKVI+AFGPEVIGENVEGKVI+M+VAEHSGRTYYQFELEPPHVLITATAAGNRLYLFNV
Sbjct: 181 PEKVINAFGPEVIGENVEGKVINMNVAEHSGRTYYQFELEPPHVLITATAAGNRLYLFNV 240

Query: 302 TANGLQWKRHYSDLKRIANSFRVV 326
           TANGLQWKRHY DLKRIA+SFRVV
Sbjct: 241 TANGLQWKRHYGDLKRIADSFRVV 259

[Close]

BLAST of Lcy12g007960 vs. NCBI nr
Match: XP_023534875.1 (psbP domain-containing protein 4, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 459.1 bits (1180), Expect = 3.1e-125
Identity = 229/264 (86.74%), Postives = 242/264 (91.67%), Query Frame = 0


Query: 62  MGTTLFTSCRFSCNFHQPKLPSHILHPQSLLERGVSVVDGEKEKLSAILNRRSVLVSGVS 121
           MG+T+F S  FSCNFHQ K PSHI      L++GV  V GEKE  S I+NRRSVL+SGVS
Sbjct: 1   MGSTMFASVPFSCNFHQSKPPSHI------LQKGVPGVGGEKENRSPIVNRRSVLLSGVS 60

Query: 122 LVSSAALGLQKECSAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPY 181
           LVSSA LGLQ EC AAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPY
Sbjct: 61  LVSSAGLGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPY 120

Query: 182 AFSVPQDWEEVPVSIADLGGTEIDLRFGSSKEGRLFVIVAPVRRFSDVIGEDATIEMVGP 241
           AFSVPQDWEEVPVSIADLGGTEIDLRF SSKEGRLFVIVAPV+RFSDVIG+DATIEMVGP
Sbjct: 121 AFSVPQDWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIEMVGP 180

Query: 242 PEKVISAFGPEVIGENVEGKVIDMSVAEHSGRTYYQFELEPPHVLITATAAGNRLYLFNV 301
           PEKVISAFGPEVIGENVEGKV++MSVAEH+GRTYYQFELEPPHVLITATAAGNRLYLF+V
Sbjct: 181 PEKVISAFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLYLFSV 240

Query: 302 TANGLQWKRHYSDLKRIANSFRVV 326
           T NGLQWKRHYSDLKRIA+SFRVV
Sbjct: 241 TGNGLQWKRHYSDLKRIADSFRVV 258

[Close]

BLAST of Lcy12g007960 vs. NCBI nr
Match: XP_022936523.1 (psbP domain-containing protein 4, chloroplastic [Cucurbita moschata] >KAG7025035.1 PsbP domain-containing protein 4, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 458.8 bits (1179), Expect = 4.0e-125
Identity = 228/264 (86.36%), Postives = 242/264 (91.67%), Query Frame = 0


Query: 62  MGTTLFTSCRFSCNFHQPKLPSHILHPQSLLERGVSVVDGEKEKLSAILNRRSVLVSGVS 121
           MG+T+F S  FSCNFHQ K PSHI      L++GV  V GEK+  S ILNRRSVL+SGVS
Sbjct: 1   MGSTMFASVPFSCNFHQSKPPSHI------LQKGVPAVGGEKDNRSPILNRRSVLLSGVS 60

Query: 122 LVSSAALGLQKECSAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPY 181
           LVSSA LGLQ EC AAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPY
Sbjct: 61  LVSSAGLGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPY 120

Query: 182 AFSVPQDWEEVPVSIADLGGTEIDLRFGSSKEGRLFVIVAPVRRFSDVIGEDATIEMVGP 241
           AFSVPQDWEEVPVSIADLGGTEIDLRF SSKEGRLFVIVAPV+RFSDVIG+DATIEMVGP
Sbjct: 121 AFSVPQDWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIEMVGP 180

Query: 242 PEKVISAFGPEVIGENVEGKVIDMSVAEHSGRTYYQFELEPPHVLITATAAGNRLYLFNV 301
           PEKVISAFGPEVIGENVEGKV++MSVAEH+GRTYYQFELEPPHVLITATAAGNRLYLF+V
Sbjct: 181 PEKVISAFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLYLFSV 240

Query: 302 TANGLQWKRHYSDLKRIANSFRVV 326
           T NGLQWKRH+SDLKRIA+SFRVV
Sbjct: 241 TGNGLQWKRHFSDLKRIADSFRVV 258

[Close]

BLAST of Lcy12g007960 vs. NCBI nr
Match: KAG6592174.1 (PsbP domain-containing protein 4, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 458.8 bits (1179), Expect = 4.0e-125
Identity = 228/264 (86.36%), Postives = 242/264 (91.67%), Query Frame = 0


Query: 62  MGTTLFTSCRFSCNFHQPKLPSHILHPQSLLERGVSVVDGEKEKLSAILNRRSVLVSGVS 121
           MG+T+F +  FSCNFHQ K PSHI      L++GV  V GEKE  S ILNRRSVL+SGVS
Sbjct: 1   MGSTMFATVPFSCNFHQSKPPSHI------LQKGVPAVGGEKENRSPILNRRSVLLSGVS 60

Query: 122 LVSSAALGLQKECSAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPY 181
           LVSSA LGLQ EC AAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPY
Sbjct: 61  LVSSAGLGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPY 120

Query: 182 AFSVPQDWEEVPVSIADLGGTEIDLRFGSSKEGRLFVIVAPVRRFSDVIGEDATIEMVGP 241
           AFSVPQDWEEVPVSIADLGGTEIDLRF SSKEGRLFVIVAPV+RFSDVIG+DATIEMVGP
Sbjct: 121 AFSVPQDWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIEMVGP 180

Query: 242 PEKVISAFGPEVIGENVEGKVIDMSVAEHSGRTYYQFELEPPHVLITATAAGNRLYLFNV 301
           PEKVISAFGPEVIGENVEGKV++MSVAEH+GRTYYQFELEPPHVLITATAAGNRLYLF+V
Sbjct: 181 PEKVISAFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLYLFSV 240

Query: 302 TANGLQWKRHYSDLKRIANSFRVV 326
           T NGLQWKRH+SDLKRIA+SFRVV
Sbjct: 241 TGNGLQWKRHFSDLKRIADSFRVV 258

[Close]

BLAST of Lcy12g007960 vs. NCBI nr
Match: XP_038896887.1 (psbP domain-containing protein 4, chloroplastic [Benincasa hispida])

HSP 1 Score: 458.0 bits (1177), Expect = 6.8e-125
Identity = 232/267 (86.89%), Postives = 240/267 (89.89%), Query Frame = 0


Query: 62  MGTTLFTSCRFSCNFHQPKLPSHILHPQSLLERGVSVVDG---EKEKLSAILNRRSVLVS 121
           MGTTLFT   F    HQP LPS +LHP S L + VS V G   E   LS  LNRR VLVS
Sbjct: 1   MGTTLFTINPFFSFCHQPNLPSPLLHPNSFLPKPVSAVHGGQQENPNLSPTLNRRWVLVS 60

Query: 122 GVSLVSSAALGLQKECSAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPI 181
           GVSL+SSAALGL K+C AAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPI
Sbjct: 61  GVSLLSSAALGLPKDCLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPI 120

Query: 182 IPYAFSVPQDWEEVPVSIADLGGTEIDLRFGSSKEGRLFVIVAPVRRFSDVIGEDATIEM 241
           IPYAFSVPQDWEEVPVSIADLGGTEIDLRFGSSKEGRLFVIVAPVRRFSDVIGEDATIEM
Sbjct: 121 IPYAFSVPQDWEEVPVSIADLGGTEIDLRFGSSKEGRLFVIVAPVRRFSDVIGEDATIEM 180

Query: 242 VGPPEKVISAFGPEVIGENVEGKVIDMSVAEHSGRTYYQFELEPPHVLITATAAGNRLYL 301
           VGPPEKVI+AFGPEVIGENVEGKVI MSVAEHSGRTYYQFELEPPHV+ITATAAGNRLYL
Sbjct: 181 VGPPEKVINAFGPEVIGENVEGKVISMSVAEHSGRTYYQFELEPPHVIITATAAGNRLYL 240

Query: 302 FNVTANGLQWKRHYSDLKRIANSFRVV 326
           F+VTANGLQWKRHYSDLKRIA+SFRVV
Sbjct: 241 FSVTANGLQWKRHYSDLKRIADSFRVV 267

[Close]

BLAST of Lcy12g007960 vs. TAIR 10
Match: AT1G77090.1 (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein )

HSP 1 Score: 354.8 bits (909), Expect = 7.6e-98
Identity = 173/224 (77.23%), Postives = 193/224 (86.16%), Query Frame = 0


Query: 102 EKEKLSAILNRRSVLVSGVSLVSSAALGLQKECSAAVKQGLLAGRIPGLSEPDEQGWRTY 161
           E E  + +L+RRSV+ SG+ + S+ AL   +E  A VKQGLLAGR+PGLSEPDE+GWRTY
Sbjct: 38  EDEWCARVLSRRSVMASGL-VSSTTALAFPREGLAVVKQGLLAGRVPGLSEPDEEGWRTY 97

Query: 162 RRPDEKSGGHGVGWSPIIPYAFSVPQDWEEVPVSIADLGGTEIDLRFGSSKEGRLFVIVA 221
           RRPDEKSGGHGVGWSPIIPYAFSVPQDW EVPVSIADLGGTEIDLRF S KEGRL VIVA
Sbjct: 98  RRPDEKSGGHGVGWSPIIPYAFSVPQDWNEVPVSIADLGGTEIDLRFASPKEGRLSVIVA 157

Query: 222 PVRRFSDVIGEDATIEMVGPPEKVISAFGPEVIGENVEGKVIDMSVAEHSGRTYYQFELE 281
           PV RF+D +G+D  IE +G P KVI+AFGPEVIGENVEGKV+  +VAEH GR YYQFELE
Sbjct: 158 PVLRFADNLGDDVKIENIGQPAKVINAFGPEVIGENVEGKVLSSNVAEHDGRLYYQFELE 217

Query: 282 PPHVLITATAAGNRLYLFNVTANGLQWKRHYSDLKRIANSFRVV 326
           PPHVLITATAAGNRLYLF+VT NGLQWKRHY DLKRIA+SFR+V
Sbjct: 218 PPHVLITATAAGNRLYLFSVTGNGLQWKRHYKDLKRIASSFRIV 260

[Close]

BLAST of Lcy12g007960 vs. TAIR 10
Match: AT3G56650.1 (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein )

HSP 1 Score: 85.1 bits (209), Expect = 1.1e-16
Identity = 50/160 (31.25%), Postives = 91/160 (56.88%), Query Frame = 0


Query: 180 PYAFSVPQDWEEVPVSIADLGG--------TEIDLRFGSSKEGRLFVIVAPVRRFSDVIG 239
           PY F +P +W+++ ++    G           I+++F + K+G++ V+ +P+ R ++   
Sbjct: 105 PYQFVLPPNWKQLRIANILSGNYCQPKCAEPWIEVKFENEKQGKVQVVASPLIRLTN--K 164

Query: 240 EDATIEMVGPPEKVISAFGPEVIGENVEG-KVIDMSVAEHSGRTYYQFELEPP------H 299
            +ATIE +G PEKVI++ GP V G + +  +++  S+ +   +TYY++ LE P      H
Sbjct: 165 PNATIEDLGEPEKVIASLGPFVTGNSYDSDELLKTSIEKIGDQTYYKYVLETPFALTGSH 224

Query: 300 VLITATAAGNRLYLFNVTANGLQWKRHYSDLKRIANSFRV 325
            L  ATA G+ + LF V+A   QW+     L+ I +SF++
Sbjct: 225 NLAKATAKGSTVVLFVVSATEKQWQSSQKTLEAILDSFQL 262

[Close]

BLAST of Lcy12g007960 vs. TAIR 10
Match: AT3G55330.1 (PsbP-like protein 1 )

HSP 1 Score: 50.8 bits (120), Expect = 2.3e-06
Identity = 40/153 (26.14%), Postives = 63/153 (41.18%), Query Frame = 0


Query: 181 YAFSVPQDWEEVPVSIADLGGTEIDLRFGSSKEGRLFVIVAPVRRFSD--VIGEDATIEM 240
           YAF  P  W+EV +              G  K  +   ++ P+   S   V     TI+ 
Sbjct: 91  YAFLYPFGWQEVVIE-------------GQDKVYK--DVIEPLESVSVNLVPTSKQTIKE 150

Query: 241 VGPPEKVISAFGPEVIG-ENVEGKVIDMSVAEHSGRTYYQFELE------PPHVLITATA 300
            GPP+++      +V+   N +  +ID S  +  G+TYYQFE          H L T T 
Sbjct: 151 FGPPKQIAETLIKKVLAPPNQKTTLIDASEHDVDGKTYYQFEFTVQARNYTRHALGTITV 210

Query: 301 AGNRLYLFNVTANGLQWKRHYSDLKRIANSFRV 325
                Y     AN  +W++    L  + +SF++
Sbjct: 211 FNGNFYTLTTGANERRWEKMKDRLHTVVDSFKI 228

The following BLAST results are available for this feature:

BLAST of Lcy12g007960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O49292	1.1e-96	77.23	PsbP domain-containing protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LXX5	1.6e-15	31.25	PsbP domain-containing protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
P82538	3.3e-05	26.14	PsbP-like protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPL1 PE=1 ...	[more]

BLAST of Lcy12g007960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DKA3	5.5e-128	87.12	psbP domain-containing protein 4, chloroplastic OS=Momordica charantia OX=3673 G...	[more]
A0A6J1FDH1	1.9e-125	86.36	psbP domain-containing protein 4, chloroplastic OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1IFH3	5.7e-125	86.36	psbP domain-containing protein 4, chloroplastic OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A0A0K501	7.2e-120	83.15	PsbP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G322590 PE=4 S...	[more]
A0A5A7T2U1	2.7e-119	83.96	PsbP domain-containing protein 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]

BLAST of Lcy12g007960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154428.1	1.1e-127	87.12	psbP domain-containing protein 4, chloroplastic [Momordica charantia]	[more]
XP_023534875.1	3.1e-125	86.74	psbP domain-containing protein 4, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_022936523.1	4.0e-125	86.36	psbP domain-containing protein 4, chloroplastic [Cucurbita moschata] >KAG7025035...	[more]
KAG6592174.1	4.0e-125	86.36	PsbP domain-containing protein 4, chloroplastic, partial [Cucurbita argyrosperma...	[more]
XP_038896887.1	6.8e-125	86.89	psbP domain-containing protein 4, chloroplastic [Benincasa hispida]	[more]

BLAST of Lcy12g007960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G77090.1	7.6e-98	77.23	Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein	[more]
AT3G56650.1	1.1e-16	31.25	Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein	[more]
AT3G55330.1	2.3e-06	26.14	PsbP-like protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.1000.10	Mog1/PsbP, alpha/beta/alpha sandwich	coord: 177..325 e-value: 4.3E-26 score: 93.8
None	No IPR available	PANTHER	PTHR31407:SF38	PSBP DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC	coord: 79..325
None	No IPR available	PANTHER	PTHR31407	FAMILY NOT NAMED	coord: 79..325
IPR002683	PsbP, C-terminal	PFAM	PF01789	PsbP	coord: 181..324 e-value: 2.0E-12 score: 47.5
IPR016123	Mog1/PsbP, alpha/beta/alpha sandwich	SUPERFAMILY	55724	Mog1p/PsbP-like	coord: 173..324

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy12g007960.1	Lcy12g007960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0019898	extrinsic component of membrane
cellular_component	GO:0009654	photosystem II oxygen evolving complex
cellular_component	GO:0009523	photosystem II
molecular_function	GO:0005509	calcium ion binding