Lcy12g006700 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy12g006700
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Electron transfer flavoprotein subunit beta
Location	Chr12: 28895117 .. 28895633 (-)
RNA-Seq Expression	Lcy12g006700
Synteny	Lcy12g006700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGATCATGGTTGCCATTAAGCGAGTCGTCGATTACGCCGTCAAGATCCGAGTTAAACCGGACAGAGTATGAATCCAACTCATAAACTCTCCAATTCTTTTGCAATTTTATGTATTCTTCGATTCATTTTGTCAGAAGGCGACTAACCCTTTTGAAACTGCAAAATTAGACGGGTGTTGAGACCCAGAACGTGAAAATTTCGATGAACTCCTTTTGCGAGATTGCGATCGAGGAAGCCATGTGTATCAAGGAGGCTGGCTTGGCCTCTGAGGTTGTGGCGGTCAGCATGGGTCCGGCTCAGTGCATCGACACTCTCAGGACGGGTCTTGCGATGGGTGCTGACAGGGGCATTCATGTCGAAGCCACTGGACCTCTCTACCCTCTCTCTGTTGCTAAGCTTTTGAAGGCCCTCGTCGAGGTTGAGAAGTCTGGGCTTCTCTTTCTAGGCAAACAGGTTTGCTTTTATACCGATTGTCTTTCAATTTGTGACTGGGCGTTAGTGATGACAGATTGA

mRNA sequence

ATGAAGATCATGGTTGCCATTAAGCGAGTCGTCGATTACGCCGTCAAGATCCGAGTTAAACCGGACAGAACGGGTGTTGAGACCCAGAACGTGAAAATTTCGATGAACTCCTTTTGCGAGATTGCGATCGAGGAAGCCATGTGTATCAAGGAGGCTGGCTTGGCCTCTGAGGTTGTGGCGGTCAGCATGGGTCCGGCTCAGTGCATCGACACTCTCAGGACGGGTCTTGCGATGGGTGCTGACAGGGGCATTCATGTCGAAGCCACTGGACCTCTCTACCCTCTCTCTGTTGCTAAGCTTTTGAAGGCCCTCGTCGAGGTTGAGAAGTCTGGGCTTCTCTTTCTAGGCAAACAGGTTTGCTTTTATACCGATTGTCTTTCAATTTGTGACTGGGCGTTAGTGATGACAGATTGA

Coding sequence (CDS)

ATGAAGATCATGGTTGCCATTAAGCGAGTCGTCGATTACGCCGTCAAGATCCGAGTTAAACCGGACAGAACGGGTGTTGAGACCCAGAACGTGAAAATTTCGATGAACTCCTTTTGCGAGATTGCGATCGAGGAAGCCATGTGTATCAAGGAGGCTGGCTTGGCCTCTGAGGTTGTGGCGGTCAGCATGGGTCCGGCTCAGTGCATCGACACTCTCAGGACGGGTCTTGCGATGGGTGCTGACAGGGGCATTCATGTCGAAGCCACTGGACCTCTCTACCCTCTCTCTGTTGCTAAGCTTTTGAAGGCCCTCGTCGAGGTTGAGAAGTCTGGGCTTCTCTTTCTAGGCAAACAGGTTTGCTTTTATACCGATTGTCTTTCAATTTGTGACTGGGCGTTAGTGATGACAGATTGA

Protein sequence

MKIMVAIKRVVDYAVKIRVKPDRTGVETQNVKISMNSFCEIAIEEAMCIKEAGLASEVVAVSMGPAQCIDTLRTGLAMGADRGIHVEATGPLYPLSVAKLLKALVEVEKSGLLFLGKQVCFYTDCLSICDWALVMTD

Homology

[Close]

BLAST of Lcy12g006700 vs. ExPASy Swiss-Prot
Match: Q9LSW8 (Electron transfer flavoprotein subunit beta, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=ETFB PE=1 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 8.9e-45
Identity = 89/118 (75.42%), Postives = 105/118 (88.98%), Query Frame = 0


Query: 1   MKIMVAIKRVVDYAVKIRVKPDRTGVETQNVKISMNSFCEIAIEEAMCIKEAGLASEVVA 60
           MKI+VA+KRVVDYAVKIRVKPD+TGVETQNVK+SMN FCEIA+EEA+ IKEAG A EV+A
Sbjct: 1   MKILVAVKRVVDYAVKIRVKPDKTGVETQNVKMSMNPFCEIALEEALRIKEAGFAKEVIA 60

Query: 61  VSMGPAQCIDTLRTGLAMGADRGIHVEATGPLYPLSVAKLLKALVEVEKSGLLFLGKQ 119
           VS+GP+QC+DTLRTGLAMGADRGIHVE      PL++AK+LK+L +VE  GL+FLGKQ
Sbjct: 61  VSIGPSQCVDTLRTGLAMGADRGIHVETNSIFLPLTIAKILKSLADVENPGLIFLGKQ 118

[Close]

BLAST of Lcy12g006700 vs. ExPASy Swiss-Prot
Match: A2XQV4 (Electron transfer flavoprotein subunit beta, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=ETFB PE=3 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 2.0e-36
Identity = 79/122 (64.75%), Postives = 100/122 (81.97%), Query Frame = 0


Query: 1   MKIMVAIKRVVDYAVKIRVKPDRTGVETQNVKISMNSFCEIAIEEAMCIKEAGLASEVVA 60
           MKI+VA+KRVVDYAVK+RV+PDRTGVET +VK+SMN FCEIA+EEA+ ++EAG A+EVVA
Sbjct: 1   MKILVAVKRVVDYAVKVRVRPDRTGVETASVKMSMNPFCEIAVEEALRLREAGAATEVVA 60

Query: 61  VSMGPAQCIDTLRTGLAMGADRGIHV----EATGPLYPLSVAKLLKALVEVEKSGLLFLG 119
            ++GP+Q  DTLRT LAMGADR +HV    + + PL PL+VAK+L+AL   E  GL+ LG
Sbjct: 61  ATVGPSQSADTLRTALAMGADRAVHVLHDPDPSRPLLPLAVAKILRALALQENPGLVILG 120

[Close]

BLAST of Lcy12g006700 vs. ExPASy Swiss-Prot
Match: Q7F9U3 (Electron transfer flavoprotein subunit beta, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=ETFB PE=2 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 4.4e-36
Identity = 78/122 (63.93%), Postives = 100/122 (81.97%), Query Frame = 0


Query: 1   MKIMVAIKRVVDYAVKIRVKPDRTGVETQNVKISMNSFCEIAIEEAMCIKEAGLASEVVA 60
           MKI+VA+KRVVDYAVK+RV+PDRTGVET +VK+SMN FCEIA+EEA+ ++E+G A+EVVA
Sbjct: 1   MKILVAVKRVVDYAVKVRVRPDRTGVETASVKMSMNPFCEIAVEEALRLRESGAATEVVA 60

Query: 61  VSMGPAQCIDTLRTGLAMGADRGIHV----EATGPLYPLSVAKLLKALVEVEKSGLLFLG 119
            ++GP+Q  DTLRT LAMGADR +HV    + + PL PL+VAK+L+AL   E  GL+ LG
Sbjct: 61  ATVGPSQSADTLRTALAMGADRAVHVLHDPDPSRPLLPLAVAKILRALALQENPGLVILG 120

[Close]

BLAST of Lcy12g006700 vs. ExPASy Swiss-Prot
Match: Q54YZ4 (Electron transfer flavoprotein subunit beta OS=Dictyostelium discoideum OX=44689 GN=etfb PE=3 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 7.6e-36
Identity = 80/118 (67.80%), Postives = 95/118 (80.51%), Query Frame = 0


Query: 1   MKIMVAIKRVVDYAVKIRVKPDRTGVETQNVKISMNSFCEIAIEEAMCIKEAGLASEVVA 60
           +KI+V IKRVVDYAVKIRVK D++GVET NVK+SMN F EIA+EEA+ IKE  LA E++A
Sbjct: 3   LKILVPIKRVVDYAVKIRVKGDKSGVETANVKMSMNPFDEIAVEEAIRIKEKNLAKEIIA 62

Query: 61  VSMGPAQCIDTLRTGLAMGADRGIHVEATGPLYPLSVAKLLKALVEVEKSGLLFLGKQ 119
           VSMGP    +T+RT +AMGAD+GIHVE T  L PLSVAKLLK LV+ EK  L+ LGKQ
Sbjct: 63  VSMGPKTSQETIRTAIAMGADKGIHVETTAELQPLSVAKLLKELVDKEKPNLIILGKQ 120

[Close]

BLAST of Lcy12g006700 vs. ExPASy Swiss-Prot
Match: P53575 (Electron transfer flavoprotein subunit beta OS=Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110) OX=224911 GN=etfB PE=3 SV=2)

HSP 1 Score: 144.1 bits (362), Expect = 1.2e-33
Identity = 75/118 (63.56%), Postives = 95/118 (80.51%), Query Frame = 0


Query: 1   MKIMVAIKRVVDYAVKIRVKPDRTGVETQNVKISMNSFCEIAIEEAMCIKEAGLASEVVA 60
           MK++V +KRVVDY VK+RVK D +GVE  NVK+SMN F EIA+EEA+ +KE G A+EVV 
Sbjct: 1   MKVLVPVKRVVDYNVKVRVKGDGSGVELANVKMSMNPFDEIAVEEALRLKEGGKATEVVV 60

Query: 61  VSMGPAQCIDTLRTGLAMGADRGIHVEATGPLYPLSVAKLLKALVEVEKSGLLFLGKQ 119
           VS+GPAQ  +T+RTGLAMGADRGI V+A G + PL+VAK+LK + E E+ GL+ LGKQ
Sbjct: 61  VSIGPAQASETIRTGLAMGADRGILVKAEGTVEPLAVAKILKKVAEEEQPGLIILGKQ 118

[Close]

BLAST of Lcy12g006700 vs. ExPASy TrEMBL
Match: A0A5A7U6K7 (Electron transfer flavoprotein subunit beta OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G005010 PE=3 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 5.6e-50
Identity = 108/118 (91.53%), Postives = 112/118 (94.92%), Query Frame = 0


Query: 1   MKIMVAIKRVVDYAVKIRVKPDRTGVETQNVKISMNSFCEIAIEEAMCIKEAGLASEVVA 60
           MKIMVAIKRVVDYAVKIRVKPDRTGVETQNVK+SMN FCEIAIEEA+ IKEAGLASEVVA
Sbjct: 1   MKIMVAIKRVVDYAVKIRVKPDRTGVETQNVKMSMNPFCEIAIEEALRIKEAGLASEVVA 60

Query: 61  VSMGPAQCIDTLRTGLAMGADRGIHVEATGPLYPLSVAKLLKALVEVEKSGLLFLGKQ 119
           VSMGP QC+DTLRTGLAMGADRGIHVEAT PLYPLSVAK+LKALVEVEK GLL LGKQ
Sbjct: 61  VSMGPVQCVDTLRTGLAMGADRGIHVEATAPLYPLSVAKILKALVEVEKPGLLLLGKQ 118

[Close]

BLAST of Lcy12g006700 vs. ExPASy TrEMBL
Match: A0A5D3D346 (Electron transfer flavoprotein subunit beta OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G001500 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 5.6e-50
Identity = 108/118 (91.53%), Postives = 112/118 (94.92%), Query Frame = 0


Query: 1   MKIMVAIKRVVDYAVKIRVKPDRTGVETQNVKISMNSFCEIAIEEAMCIKEAGLASEVVA 60
           MKIMVAIKRVVDYAVKIRVKPDRTGVETQNVK+SMN FCEIAIEEA+ IKEAGLASEVVA
Sbjct: 1   MKIMVAIKRVVDYAVKIRVKPDRTGVETQNVKMSMNPFCEIAIEEALRIKEAGLASEVVA 60

Query: 61  VSMGPAQCIDTLRTGLAMGADRGIHVEATGPLYPLSVAKLLKALVEVEKSGLLFLGKQ 119
           VSMGP QC+DTLRTGLAMGADRGIHVEAT PLYPLSVAK+LKALVEVEK GLL LGKQ
Sbjct: 61  VSMGPVQCVDTLRTGLAMGADRGIHVEATAPLYPLSVAKILKALVEVEKPGLLLLGKQ 118

[Close]

BLAST of Lcy12g006700 vs. ExPASy TrEMBL
Match: A0A0A0L547 (Electron transfer flavoprotein subunit beta OS=Cucumis sativus OX=3659 GN=Csa_3G135650 PE=3 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 5.6e-50
Identity = 108/118 (91.53%), Postives = 112/118 (94.92%), Query Frame = 0


Query: 1   MKIMVAIKRVVDYAVKIRVKPDRTGVETQNVKISMNSFCEIAIEEAMCIKEAGLASEVVA 60
           MKIMVAIKRVVDYAVKIRVKPDRTGVETQNVK+SMN FCEIAIEEA+ IKEAGLASEVVA
Sbjct: 1   MKIMVAIKRVVDYAVKIRVKPDRTGVETQNVKMSMNPFCEIAIEEALRIKEAGLASEVVA 60

Query: 61  VSMGPAQCIDTLRTGLAMGADRGIHVEATGPLYPLSVAKLLKALVEVEKSGLLFLGKQ 119
           VSMGP QC+DTLRTGLAMGADRGIHVEAT PLYPLSVAK+LKALVEVEK GLL LGKQ
Sbjct: 61  VSMGPVQCVDTLRTGLAMGADRGIHVEATAPLYPLSVAKILKALVEVEKPGLLLLGKQ 118

[Close]

BLAST of Lcy12g006700 vs. ExPASy TrEMBL
Match: A0A1S3AWL9 (Electron transfer flavoprotein subunit beta OS=Cucumis melo OX=3656 GN=LOC103483604 PE=3 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 5.6e-50
Identity = 108/118 (91.53%), Postives = 112/118 (94.92%), Query Frame = 0


Query: 1   MKIMVAIKRVVDYAVKIRVKPDRTGVETQNVKISMNSFCEIAIEEAMCIKEAGLASEVVA 60
           MKIMVAIKRVVDYAVKIRVKPDRTGVETQNVK+SMN FCEIAIEEA+ IKEAGLASEVVA
Sbjct: 1   MKIMVAIKRVVDYAVKIRVKPDRTGVETQNVKMSMNPFCEIAIEEALRIKEAGLASEVVA 60

Query: 61  VSMGPAQCIDTLRTGLAMGADRGIHVEATGPLYPLSVAKLLKALVEVEKSGLLFLGKQ 119
           VSMGP QC+DTLRTGLAMGADRGIHVEAT PLYPLSVAK+LKALVEVEK GLL LGKQ
Sbjct: 61  VSMGPVQCVDTLRTGLAMGADRGIHVEATAPLYPLSVAKILKALVEVEKPGLLLLGKQ 118

[Close]

BLAST of Lcy12g006700 vs. ExPASy TrEMBL
Match: A0A6J1J064 (Electron transfer flavoprotein subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111480060 PE=3 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 1.2e-49
Identity = 108/118 (91.53%), Postives = 112/118 (94.92%), Query Frame = 0


Query: 1   MKIMVAIKRVVDYAVKIRVKPDRTGVETQNVKISMNSFCEIAIEEAMCIKEAGLASEVVA 60
           MKIMVAIKRVVDYAVKIRVK DRTGVETQNVK+SMN FCEIAIEEA+ IKEAGLASEVVA
Sbjct: 1   MKIMVAIKRVVDYAVKIRVKADRTGVETQNVKMSMNPFCEIAIEEALRIKEAGLASEVVA 60

Query: 61  VSMGPAQCIDTLRTGLAMGADRGIHVEATGPLYPLSVAKLLKALVEVEKSGLLFLGKQ 119
           VSMGPAQC+DTLRTGLAMGADRGIHVEAT PLYPLSVAKLLKAL+EVEK GLL LGKQ
Sbjct: 61  VSMGPAQCVDTLRTGLAMGADRGIHVEATAPLYPLSVAKLLKALIEVEKPGLLLLGKQ 118

[Close]

BLAST of Lcy12g006700 vs. NCBI nr
Match: XP_038877349.1 (electron transfer flavoprotein subunit beta, mitochondrial [Benincasa hispida])

HSP 1 Score: 208.0 bits (528), Expect = 5.2e-50
Identity = 109/118 (92.37%), Postives = 113/118 (95.76%), Query Frame = 0


Query: 1   MKIMVAIKRVVDYAVKIRVKPDRTGVETQNVKISMNSFCEIAIEEAMCIKEAGLASEVVA 60
           MKIMVAIKRVVDYAVKIRVKPDRTGVETQNVK+SMN FCEIAIEEA+ IKEAGLASEVVA
Sbjct: 1   MKIMVAIKRVVDYAVKIRVKPDRTGVETQNVKMSMNPFCEIAIEEALRIKEAGLASEVVA 60

Query: 61  VSMGPAQCIDTLRTGLAMGADRGIHVEATGPLYPLSVAKLLKALVEVEKSGLLFLGKQ 119
           V+MGPAQC+DTLRTGLAMGADRGIHVEAT PLYPLSVAKLLKALVEVEK GLL LGKQ
Sbjct: 61  VTMGPAQCVDTLRTGLAMGADRGIHVEATAPLYPLSVAKLLKALVEVEKPGLLLLGKQ 118

[Close]

BLAST of Lcy12g006700 vs. NCBI nr
Match: XP_008438539.1 (PREDICTED: electron transfer flavoprotein subunit beta, mitochondrial [Cucumis melo])

HSP 1 Score: 206.8 bits (525), Expect = 1.2e-49
Identity = 108/118 (91.53%), Postives = 112/118 (94.92%), Query Frame = 0


Query: 1   MKIMVAIKRVVDYAVKIRVKPDRTGVETQNVKISMNSFCEIAIEEAMCIKEAGLASEVVA 60
           MKIMVAIKRVVDYAVKIRVKPDRTGVETQNVK+SMN FCEIAIEEA+ IKEAGLASEVVA
Sbjct: 1   MKIMVAIKRVVDYAVKIRVKPDRTGVETQNVKMSMNPFCEIAIEEALRIKEAGLASEVVA 60

Query: 61  VSMGPAQCIDTLRTGLAMGADRGIHVEATGPLYPLSVAKLLKALVEVEKSGLLFLGKQ 119
           VSMGP QC+DTLRTGLAMGADRGIHVEAT PLYPLSVAK+LKALVEVEK GLL LGKQ
Sbjct: 61  VSMGPVQCVDTLRTGLAMGADRGIHVEATAPLYPLSVAKILKALVEVEKPGLLLLGKQ 118

[Close]

BLAST of Lcy12g006700 vs. NCBI nr
Match: KAA0049261.1 (electron transfer flavoprotein subunit beta [Cucumis melo var. makuwa])

HSP 1 Score: 206.8 bits (525), Expect = 1.2e-49
Identity = 108/118 (91.53%), Postives = 112/118 (94.92%), Query Frame = 0


Query: 1   MKIMVAIKRVVDYAVKIRVKPDRTGVETQNVKISMNSFCEIAIEEAMCIKEAGLASEVVA 60
           MKIMVAIKRVVDYAVKIRVKPDRTGVETQNVK+SMN FCEIAIEEA+ IKEAGLASEVVA
Sbjct: 1   MKIMVAIKRVVDYAVKIRVKPDRTGVETQNVKMSMNPFCEIAIEEALRIKEAGLASEVVA 60

Query: 61  VSMGPAQCIDTLRTGLAMGADRGIHVEATGPLYPLSVAKLLKALVEVEKSGLLFLGKQ 119
           VSMGP QC+DTLRTGLAMGADRGIHVEAT PLYPLSVAK+LKALVEVEK GLL LGKQ
Sbjct: 61  VSMGPVQCVDTLRTGLAMGADRGIHVEATAPLYPLSVAKILKALVEVEKPGLLLLGKQ 118

[Close]

BLAST of Lcy12g006700 vs. NCBI nr
Match: TYK17296.1 (electron transfer flavoprotein subunit beta [Cucumis melo var. makuwa])

HSP 1 Score: 206.8 bits (525), Expect = 1.2e-49
Identity = 108/118 (91.53%), Postives = 112/118 (94.92%), Query Frame = 0


Query: 1   MKIMVAIKRVVDYAVKIRVKPDRTGVETQNVKISMNSFCEIAIEEAMCIKEAGLASEVVA 60
           MKIMVAIKRVVDYAVKIRVKPDRTGVETQNVK+SMN FCEIAIEEA+ IKEAGLASEVVA
Sbjct: 1   MKIMVAIKRVVDYAVKIRVKPDRTGVETQNVKMSMNPFCEIAIEEALRIKEAGLASEVVA 60

Query: 61  VSMGPAQCIDTLRTGLAMGADRGIHVEATGPLYPLSVAKLLKALVEVEKSGLLFLGKQ 119
           VSMGP QC+DTLRTGLAMGADRGIHVEAT PLYPLSVAK+LKALVEVEK GLL LGKQ
Sbjct: 61  VSMGPVQCVDTLRTGLAMGADRGIHVEATAPLYPLSVAKILKALVEVEKPGLLLLGKQ 118

[Close]

BLAST of Lcy12g006700 vs. NCBI nr
Match: KAE8650331.1 (hypothetical protein Csa_009549 [Cucumis sativus])

HSP 1 Score: 206.8 bits (525), Expect = 1.2e-49
Identity = 108/118 (91.53%), Postives = 112/118 (94.92%), Query Frame = 0


Query: 1   MKIMVAIKRVVDYAVKIRVKPDRTGVETQNVKISMNSFCEIAIEEAMCIKEAGLASEVVA 60
           MKIMVAIKRVVDYAVKIRVKPDRTGVETQNVK+SMN FCEIAIEEA+ IKEAGLASEVVA
Sbjct: 274 MKIMVAIKRVVDYAVKIRVKPDRTGVETQNVKMSMNPFCEIAIEEALRIKEAGLASEVVA 333

Query: 61  VSMGPAQCIDTLRTGLAMGADRGIHVEATGPLYPLSVAKLLKALVEVEKSGLLFLGKQ 119
           VSMGP QC+DTLRTGLAMGADRGIHVEAT PLYPLSVAK+LKALVEVEK GLL LGKQ
Sbjct: 334 VSMGPVQCVDTLRTGLAMGADRGIHVEATAPLYPLSVAKILKALVEVEKPGLLLLGKQ 391

[Close]

BLAST of Lcy12g006700 vs. TAIR 10
Match: AT5G43430.1 (electron transfer flavoprotein beta )

HSP 1 Score: 181.0 bits (458), Expect = 6.3e-46
Identity = 89/118 (75.42%), Postives = 105/118 (88.98%), Query Frame = 0


Query: 1   MKIMVAIKRVVDYAVKIRVKPDRTGVETQNVKISMNSFCEIAIEEAMCIKEAGLASEVVA 60
           MKI+VA+KRVVDYAVKIRVKPD+TGVETQNVK+SMN FCEIA+EEA+ IKEAG A EV+A
Sbjct: 1   MKILVAVKRVVDYAVKIRVKPDKTGVETQNVKMSMNPFCEIALEEALRIKEAGFAKEVIA 60

Query: 61  VSMGPAQCIDTLRTGLAMGADRGIHVEATGPLYPLSVAKLLKALVEVEKSGLLFLGKQ 119
           VS+GP+QC+DTLRTGLAMGADRGIHVE      PL++AK+LK+L +VE  GL+FLGKQ
Sbjct: 61  VSIGPSQCVDTLRTGLAMGADRGIHVETNSIFLPLTIAKILKSLADVENPGLIFLGKQ 118

[Close]

BLAST of Lcy12g006700 vs. TAIR 10
Match: AT5G43430.2 (electron transfer flavoprotein beta )

HSP 1 Score: 181.0 bits (458), Expect = 6.3e-46
Identity = 89/118 (75.42%), Postives = 105/118 (88.98%), Query Frame = 0


Query: 1   MKIMVAIKRVVDYAVKIRVKPDRTGVETQNVKISMNSFCEIAIEEAMCIKEAGLASEVVA 60
           MKI+VA+KRVVDYAVKIRVKPD+TGVETQNVK+SMN FCEIA+EEA+ IKEAG A EV+A
Sbjct: 1   MKILVAVKRVVDYAVKIRVKPDKTGVETQNVKMSMNPFCEIALEEALRIKEAGFAKEVIA 60

Query: 61  VSMGPAQCIDTLRTGLAMGADRGIHVEATGPLYPLSVAKLLKALVEVEKSGLLFLGKQ 119
           VS+GP+QC+DTLRTGLAMGADRGIHVE      PL++AK+LK+L +VE  GL+FLGKQ
Sbjct: 61  VSIGPSQCVDTLRTGLAMGADRGIHVETNSIFLPLTIAKILKSLADVENPGLIFLGKQ 118

[Close]

BLAST of Lcy12g006700 vs. TAIR 10
Match: AT5G43430.3 (electron transfer flavoprotein beta )

HSP 1 Score: 125.9 bits (315), Expect = 2.4e-29
Identity = 60/86 (69.77%), Postives = 73/86 (84.88%), Query Frame = 0


Query: 33  ISMNSFCEIAIEEAMCIKEAGLASEVVAVSMGPAQCIDTLRTGLAMGADRGIHVEATGPL 92
           +SMN FCEIA+EEA+ IKEAG A EV+AVS+GP+QC+DTLRTGLAMGADRGIHVE     
Sbjct: 1   MSMNPFCEIALEEALRIKEAGFAKEVIAVSIGPSQCVDTLRTGLAMGADRGIHVETNSIF 60

Query: 93  YPLSVAKLLKALVEVEKSGLLFLGKQ 119
            PL++AK+LK+L +VE  GL+FLGKQ
Sbjct: 61  LPLTIAKILKSLADVENPGLIFLGKQ 86

The following BLAST results are available for this feature:

BLAST of Lcy12g006700 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LSW8	8.9e-45	75.42	Electron transfer flavoprotein subunit beta, mitochondrial OS=Arabidopsis thalia...	[more]
A2XQV4	2.0e-36	64.75	Electron transfer flavoprotein subunit beta, mitochondrial OS=Oryza sativa subsp...	[more]
Q7F9U3	4.4e-36	63.93	Electron transfer flavoprotein subunit beta, mitochondrial OS=Oryza sativa subsp...	[more]
Q54YZ4	7.6e-36	67.80	Electron transfer flavoprotein subunit beta OS=Dictyostelium discoideum OX=44689...	[more]
P53575	1.2e-33	63.56	Electron transfer flavoprotein subunit beta OS=Bradyrhizobium diazoefficiens (st...	[more]

BLAST of Lcy12g006700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U6K7	5.6e-50	91.53	Electron transfer flavoprotein subunit beta OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A5D3D346	5.6e-50	91.53	Electron transfer flavoprotein subunit beta OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A0A0L547	5.6e-50	91.53	Electron transfer flavoprotein subunit beta OS=Cucumis sativus OX=3659 GN=Csa_3G...	[more]
A0A1S3AWL9	5.6e-50	91.53	Electron transfer flavoprotein subunit beta OS=Cucumis melo OX=3656 GN=LOC103483...	[more]
A0A6J1J064	1.2e-49	91.53	Electron transfer flavoprotein subunit beta OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]

BLAST of Lcy12g006700 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877349.1	5.2e-50	92.37	electron transfer flavoprotein subunit beta, mitochondrial [Benincasa hispida]	[more]
XP_008438539.1	1.2e-49	91.53	PREDICTED: electron transfer flavoprotein subunit beta, mitochondrial [Cucumis m...	[more]
KAA0049261.1	1.2e-49	91.53	electron transfer flavoprotein subunit beta [Cucumis melo var. makuwa]	[more]
TYK17296.1	1.2e-49	91.53	electron transfer flavoprotein subunit beta [Cucumis melo var. makuwa]	[more]
KAE8650331.1	1.2e-49	91.53	hypothetical protein Csa_009549 [Cucumis sativus]	[more]

BLAST of Lcy12g006700 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43430.1	6.3e-46	75.42	electron transfer flavoprotein beta	[more]
AT5G43430.2	6.3e-46	75.42	electron transfer flavoprotein beta	[more]
AT5G43430.3	2.4e-29	69.77	electron transfer flavoprotein beta	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	3.40.50.620	HUPs	coord: 1..120 e-value: 3.9E-37 score: 130.0
IPR014730	Electron transfer flavoprotein, alpha/beta-subunit, N-terminal	PFAM	PF01012	ETF	coord: 26..118 e-value: 1.1E-15 score: 58.0
IPR012255	Electron transfer flavoprotein, beta subunit	PANTHER	PTHR21294	ELECTRON TRANSFER FLAVOPROTEIN BETA-SUBUNIT	coord: 1..119
None	No IPR available	PANTHER	PTHR21294:SF8	ELECTRON TRANSFER FLAVOPROTEIN SUBUNIT BETA	coord: 1..119
None	No IPR available	SUPERFAMILY	52402	Adenine nucleotide alpha hydrolases-like	coord: 1..119

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy12g006700.1	Lcy12g006700.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0005759	mitochondrial matrix
molecular_function	GO:0009055	electron transfer activity