Lcy12g006340 (gene) Sponge gourd (P93075) v1

Overview
NameLcy12g006340
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase domain-containing protein
LocationChr12: 27574681 .. 27576039 (+)
RNA-Seq ExpressionLcy12g006340
SyntenyLcy12g006340
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTAACTTTTGGTGGGGGGGCTCAGAGGAGTCTAGACGAACTCATTGGATGAGTTGGGAGTCGATGTGTCTCCCTAAGTGTATGGGTGGTTTAGGCTTCCAGAATATGGAGTTTTTCAACCAAGCCCTCATGGCAAAACAATGTTGGCGTATCTTTAGTGAGCCCTCATCCCTGCTTGGCCTGGTTCTAAAAGGGAGATATTTTCCAAACTCTAGGTTTCTTGAGGCTGAGGTAGGATACCGGTCATCTTTCGTGTGGCGAAGTTTGATGTGGGATCGTCAGTTATTAGTGCGAGGATGTCGGTAGAGGATAGGGAATGGGCGCAGTGCCCCAATTTACTCCTCCAACTGGCTGCCGAACGAGTACTCCCTACAAGTACATTCTTTTCCTACTTTACCTTTGACTAGTCGAGTGAAGGATGAGGAGAAGCTCAGGAACCATTTCACTACTGCAGACTGTGAGGCGATTCAGAGGATACCGCTGTGTAATGGTTTATCCGAGGACCGATTAATCTGGCACTTTGAGAAAAACAGTTTGTTTACCGAGAAGAGTGGGTATAAATTGGCCCATAGGCTGCATATTCAAGATCGGCCTTCATCGTCTGATTCGGCTGTGTGGCAAAGTTGGTGGTCGAATGCTTGGAAGTTAAATATCCCGAGCAAAATCAGGTTCTTCCTATGGAGGCTAACGCACAATCGGCTGCCCACAAAGATTAATTGCCTTAAGCGAGGTATGGACATTTCCAATTTATGTGTTTTCTGTCAATCTTCCTTTGAGGACTGTTTACATATTTTTTGGGTTTGTCCTGCTATTGAACATATGTGGCGTGGGTCGAAATTTGGAGCTCTGTACCAATCTTTGGTAGCTTTAAATTTTGATGAAATATTGTGGGCTGTTAAAGATAGATTGGATCTGCAAGATTTTGAGCTCATGGTTGTTTTCTGGTGGGCTGTCTAGAACAGAAGGAATGCTTTGATTTGGGGCAAGCCATATATTGAAGATGACTTGATGCAATGGGCCTCAGATTATGTGCAGGTTTTCCAGACGGTTGTGAAGCCGAGTGGCGGTCAGACAAAGGGCCGATTGTCATTGGGTACAAGGGGAGGAAGACCCGTGTGGAATCCGCCGCTGGAAAATGAGTTGAAGCTGAATGTAGACGCCTCGGTGAAGCCAGATTCGAGCCTAGCAGGAGGCGGGTTGATTTTGCGGAATGGTAGGGGCGATGTGTTGATGGCAGCGTGTACCATTCCAAAGTGCTTTAGTGTTGATGTGGCAGAAGGCTGGGCTATGTTGAAAGGGGTCCAGTTGACTCGACAAATGGGTTTCTTTAAGTTCATCTGGAATCAGATTCGTTGA

mRNA sequence

ATGGCTAACTTTTGGTGGGGGGGCTCAGAGGAGTCTAGACGAACTCATTGGATGAGTTGGGAGTCGATGTGTCTCCCTAAGTGTATGGGTGGTTTAGGCTTCCAGAATATGGAGTTTTTCAACCAAGCCCTCATGGCAAAACAATGTTGGCGTATCTTTAGTGAGCCCTCATCCCTGCTTGGCCTGGTTCTAAAAGGGAGATATTTTCCAAACTCTAGGTTTCTTGAGGCTGAGAGGATAGGGAATGGGCGCAGTGCCCCAATTTACTCCTCCAACTGGCTGCCGAACGAGTACTCCCTACAAGTACATTCTTTTCCTACTTTACCTTTGACTAGTCGAGTGAAGGATGAGGAGAAGCTCAGGAACCATTTCACTACTGCAGACTGTGAGGCGATTCAGAGGATACCGCTGTGTAATGGTTTATCCGAGGACCGATTAATCTGGCACTTTGAGAAAAACAGTTTGTTTACCGAGAAGAGTGGGTATAAATTGGCCCATAGGCTGCATATTCAAGATCGGCCTTCATCGTCTGATTCGGCTGTGTGGCAAAGTTGGTGGTCGAATGCTTGGAAGTTAAATATCCCGAGCAAAATCAGGTTCTTCCTATGGAGGCTAACGCACAATCGGCTGCCCACAAAGATTAATTGCCTTAAGCGAGGTATGGACATTTCCAATTTATGTGTTTTCTGTCAATCTTCCTTTGAGGACTGTTTACATATTTTTTGGGTTTGTCCTGCTATTGAACATATGTGGCGTGGGTCGAAATTTGGAGCTCTGTACCAATCTTTGGTAGCTTTAAATTTTGATGAAATATTGTGGGCTGTTAAAGATAGATTGGATCTGCAAGATTTTGAGCTCATGAACAGAAGGAATGCTTTGATTTGGGGCAAGCCATATATTGAAGATGACTTGATGCAATGGGCCTCAGATTATGTGCAGGTTTTCCAGACGGTTGTGAAGCCGAGTGGCGGTCAGACAAAGGGCCGATTGTCATTGGGTACAAGGGGAGGAAGACCCGTGTGGAATCCGCCGCTGGAAAATGAGTTGAAGCTGAATGTAGACGCCTCGGTGAAGCCAGATTCGAGCCTAGCAGGAGGCGGGTTGATTTTGCGGAATGGTAGGGGCGATGTGTTGATGGCAGCGTGTACCATTCCAAAGTGCTTTAGTGTTGATGTGGCAGAAGGCTGGGCTATGTTGAAAGGGGTCCAGTTGACTCGACAAATGGGTTTCTTTAAGTTCATCTGGAATCAGATTCGTTGA

Coding sequence (CDS)

ATGGCTAACTTTTGGTGGGGGGGCTCAGAGGAGTCTAGACGAACTCATTGGATGAGTTGGGAGTCGATGTGTCTCCCTAAGTGTATGGGTGGTTTAGGCTTCCAGAATATGGAGTTTTTCAACCAAGCCCTCATGGCAAAACAATGTTGGCGTATCTTTAGTGAGCCCTCATCCCTGCTTGGCCTGGTTCTAAAAGGGAGATATTTTCCAAACTCTAGGTTTCTTGAGGCTGAGAGGATAGGGAATGGGCGCAGTGCCCCAATTTACTCCTCCAACTGGCTGCCGAACGAGTACTCCCTACAAGTACATTCTTTTCCTACTTTACCTTTGACTAGTCGAGTGAAGGATGAGGAGAAGCTCAGGAACCATTTCACTACTGCAGACTGTGAGGCGATTCAGAGGATACCGCTGTGTAATGGTTTATCCGAGGACCGATTAATCTGGCACTTTGAGAAAAACAGTTTGTTTACCGAGAAGAGTGGGTATAAATTGGCCCATAGGCTGCATATTCAAGATCGGCCTTCATCGTCTGATTCGGCTGTGTGGCAAAGTTGGTGGTCGAATGCTTGGAAGTTAAATATCCCGAGCAAAATCAGGTTCTTCCTATGGAGGCTAACGCACAATCGGCTGCCCACAAAGATTAATTGCCTTAAGCGAGGTATGGACATTTCCAATTTATGTGTTTTCTGTCAATCTTCCTTTGAGGACTGTTTACATATTTTTTGGGTTTGTCCTGCTATTGAACATATGTGGCGTGGGTCGAAATTTGGAGCTCTGTACCAATCTTTGGTAGCTTTAAATTTTGATGAAATATTGTGGGCTGTTAAAGATAGATTGGATCTGCAAGATTTTGAGCTCATGAACAGAAGGAATGCTTTGATTTGGGGCAAGCCATATATTGAAGATGACTTGATGCAATGGGCCTCAGATTATGTGCAGGTTTTCCAGACGGTTGTGAAGCCGAGTGGCGGTCAGACAAAGGGCCGATTGTCATTGGGTACAAGGGGAGGAAGACCCGTGTGGAATCCGCCGCTGGAAAATGAGTTGAAGCTGAATGTAGACGCCTCGGTGAAGCCAGATTCGAGCCTAGCAGGAGGCGGGTTGATTTTGCGGAATGGTAGGGGCGATGTGTTGATGGCAGCGTGTACCATTCCAAAGTGCTTTAGTGTTGATGTGGCAGAAGGCTGGGCTATGTTGAAAGGGGTCCAGTTGACTCGACAAATGGGTTTCTTTAAGTTCATCTGGAATCAGATTCGTTGA

Protein sequence

MANFWWGGSEESRRTHWMSWESMCLPKCMGGLGFQNMEFFNQALMAKQCWRIFSEPSSLLGLVLKGRYFPNSRFLEAERIGNGRSAPIYSSNWLPNEYSLQVHSFPTLPLTSRVKDEEKLRNHFTTADCEAIQRIPLCNGLSEDRLIWHFEKNSLFTEKSGYKLAHRLHIQDRPSSSDSAVWQSWWSNAWKLNIPSKIRFFLWRLTHNRLPTKINCLKRGMDISNLCVFCQSSFEDCLHIFWVCPAIEHMWRGSKFGALYQSLVALNFDEILWAVKDRLDLQDFELMNRRNALIWGKPYIEDDLMQWASDYVQVFQTVVKPSGGQTKGRLSLGTRGGRPVWNPPLENELKLNVDASVKPDSSLAGGGLILRNGRGDVLMAACTIPKCFSVDVAEGWAMLKGVQLTRQMGFFKFIWNQIR
Homology
BLAST of Lcy12g006340 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 9.1e-24
Identity = 108/462 (23.38%), Postives = 194/462 (41.99%), Query Frame = 0

Query: 4   FWWGGSEESRRTHWMSWESMCLPKCMGGLGFQNMEFFNQALMAKQCWRIFSEPSSLLGLV 63
           F WG + E ++ H + W  +C PK  GGLG +  +  N+AL++K  WR+  E +SL  LV
Sbjct: 73  FLWGSTAEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISKVGWRLLQEKNSLWTLV 132

Query: 64  LKGRY----FPNSRFLEAERI------------------------GNGRSAPIYSSNWLP 123
           L+ +Y      +SR+L  +                          G+G+    ++  W+ 
Sbjct: 133 LQKKYHVGEIRDSRWLIPKGSWSSTWRSIAIGLRDVVSHGVGWIPGDGQQIRFWTDRWVS 192

Query: 124 NEYSLQVHS--FPT---------LPLTSRVKDEEKLRNHFTTADCEAIQR---IPLCNGL 183
            +  L++ +   PT         L +  R  D  K+ + +TT +     R   + L  G 
Sbjct: 193 GKPLLELDNGERPTDCDTVVAKDLWIPGRGWDFAKI-DPYTTNNTRLELRAVVLDLVTG- 252

Query: 184 SEDRLIWHFEKNSLFTEKSGYKLAHRLHIQDRPSSSDSAVWQSWWSNAWKLNIPSKIRFF 243
           + DRL W F ++  F+ +S Y++   L + + P  +      S+++  WK+ +P +++ F
Sbjct: 253 ARDRLSWKFSQDGQFSVRSAYEM---LTVDEVPRPN----MASFFNCLWKVRVPERVKTF 312

Query: 244 LWRLTHNRLPTKINCLKRGMDISNLCVFCQSSFEDCLHIFWVCPAIEHMW-----RGSKF 303
           LW + +  + T+    +R +  SN+C  C+   E  LH+   CPA   +W     +  + 
Sbjct: 313 LWLVGNQAVMTEEERHRRHLSASNVCQVCKGGVESMLHVLRDCPAQLGIWVRVVPQRRQQ 372

Query: 304 GALYQSLVALNFDEILWAVKDRLDLQDFELMNRRNALIW-------GKPYIEDD------ 363
           G   +SL    +D +     DR   +D         +IW       G  + E+       
Sbjct: 373 GFFSKSLFEWLYDNL----GDRSGCEDIPWSTIFAVIIWWGWKWRCGNIFGENTKCRDRV 432

Query: 364 --LMQWASDYVQVFQTVVKPSGGQTKGRLSLGTRGGRPVWNPPLENELKLNVDASVKPDS 403
             + +WA +  +     V     Q +    +G       W  P    +K+N D + + + 
Sbjct: 433 KFVKEWAVEVYRAHSGNVLVGITQPRVERMIG-------WVSPCVGWVKVNTDGASRGNP 492

BLAST of Lcy12g006340 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 1.0e-14
Identity = 35/77 (45.45%), Postives = 52/77 (67.53%), Query Frame = 0

Query: 1   MANFWWGGSEESRRTHWMSWESMCLPK-CMGGLGFQNMEFFNQALMAKQCWRIFSEPSSL 60
           M  FWW   E  R+  W++W+ +C  K   GGLGF+++ +FNQAL+AKQ +RI  +P +L
Sbjct: 25  MTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRDLGWFNQALLAKQSFRIIHQPHTL 84

Query: 61  LGLVLKGRYFPNSRFLE 77
           L  +L+ RYFP+S  +E
Sbjct: 85  LSRLLRSRYFPHSSMME 101

BLAST of Lcy12g006340 vs. ExPASy TrEMBL
Match: A0A6J1DAR4 (uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018954 PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 1.1e-85
Identity = 179/451 (39.69%), Postives = 256/451 (56.76%), Query Frame = 0

Query: 2    ANFWWGGSEESRRTHWMSWESMCLPKCMGGLGFQNMEFFNQALMAKQCWRIFSEPSSLLG 61
            A FWWG S+E ++ HW++W S+ LPKC GG+GF+++E FN+AL+AKQCWRI + P+S+L 
Sbjct: 616  ARFWWGSSKEDKKIHWVAWNSLYLPKCEGGMGFRDLELFNKALLAKQCWRILNHPNSMLS 675

Query: 62   LVLKGRYFPNSRFLEAE-------------------------RIGNGRSAPIYSSNWLPN 121
             VLKGRYF +  F+EA+                         RIGNG S  IY  NW+PN
Sbjct: 676  RVLKGRYFKDCSFMEAKISGNPSYIWRSILWGRDLLKKGLRWRIGNGDSVFIYGDNWVPN 735

Query: 122  EYSLQVHSFPTLPLTSRVK---DEEK-------LRNHFTTADCEAIQRIPLCNGLSEDRL 181
            + +L++ S P LPL SRV    D E+       +R+ FT  + + I  IP+  G  EDRL
Sbjct: 736  QPTLKILSSPRLPLVSRVSSLVDHEEGGWQGDVVRDEFTPDEAKGILSIPIGRGAEEDRL 795

Query: 182  IWHFEKNSLFTEKSGYKLAHRLH-IQDRPSSSDSAVWQSWWSNAWKLNIPSKIRFFLWRL 241
            IW++EK  +++ +SGYK+A   +     PSSS S   + WW+  WK++IP+KI+ FLWRL
Sbjct: 796  IWNYEKTGVYSVRSGYKVALLNNPCVQAPSSSSSEEVRCWWNGFWKMHIPNKIKVFLWRL 855

Query: 242  THNRLPTKINCLKRGMDISNLCVFCQSSFEDCLHIFWVCPAIEHMWRGSKFGALYQSLVA 301
              +RLPT  N  KRG++I+N C FC  + ED +H+FW+C   E +W  SKFG L   L+ 
Sbjct: 856  CLDRLPTGCNLSKRGVEITNCCYFCGRNGEDSIHLFWICKFAEALWINSKFGKLSPFLIL 915

Query: 302  LNFDEIL-WAVKDRLDLQDFELMNRRNALIWGKP-----YIEDDLMQWASDYVQVFQTVV 361
                E L  A  + L +  + L N+RNA  +         I  +L++WA+ Y   F+   
Sbjct: 916  RESHESLSKADFEELCVVIWGLWNQRNARAFNDSTKTVFKIGMELVEWANKYAMEFR--- 975

Query: 362  KPSGGQTKGRLSLGTRGGRPVWNPPLENELKLNVDASVKPDSSLAGGGLILRNGRGDVLM 410
            +       GR+   T     +W PP E   K+N DAS       AG G+I+ N RG V+ 
Sbjct: 976  EAKSNPITGRV---TNTAEILWQPPDEGIYKINTDASFLASDQHAGLGIIIHNDRGQVMA 1035

BLAST of Lcy12g006340 vs. ExPASy TrEMBL
Match: A0A5E4FZN9 (PREDICTED: retrotransposon OS=Prunus dulcis OX=3755 GN=ALMOND_2B007697 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 8.2e-60
Identity = 149/458 (32.53%), Postives = 221/458 (48.25%), Query Frame = 0

Query: 1    MANFWWGGSEESRRTHWMSWESMCLPKCMGGLGFQNMEFFNQALMAKQCWRIFSEPSSLL 60
            MA FWW  +++ R  HW+ WE +C  K  GGLGF+++E FNQAL+AKQCWRI   P SL+
Sbjct: 754  MARFWWAKAKDKRGIHWVKWELLCKSKFAGGLGFRDLEAFNQALLAKQCWRILRTPESLV 813

Query: 61   GLVLKGRYFPNSRFLEAE-------------------------RIGNGRSAPIYSSNWLP 120
              + + RY P+  FLEAE                         R+GNG S  +Y+  WLP
Sbjct: 814  ARIFRARYHPSVPFLEAEVGTNPSFIWRSLQWGKELLNKGLRWRVGNGVSIQVYTDKWLP 873

Query: 121  NEYSLQVHSFPTLPLTSRVKD---------EEKLRNHFTTADCEAIQRIPLCNGLSEDRL 180
                 ++ S P LPL++ V D            L++ F   + +A  +IPL +    D L
Sbjct: 874  APSFFKIMSPPQLPLSTLVCDLFTSSGQWNVPLLKDIFWDQEVDAKLQIPLASLAGHDCL 933

Query: 181  IWHFEKNSLFTEKSGYKLAHRLHIQDRPSSSDSA---VWQSWWSNAWKLNIPSKIRFFLW 240
            IWH+E+N +++ KSGY+LA     +D+ S   S    +   +W   W L IP+KI+FFLW
Sbjct: 934  IWHYERNGMYSVKSGYRLA--CLEKDKMSGEPSVRVDLNSKFWKKIWALKIPNKIKFFLW 993

Query: 241  RLTHNRLPTKINCLKRGMDISNLCVFCQSSFEDCLHIFWVCPAIEHMWRGSKFGALYQSL 300
            R   + LP       R +  + +C  C    E  LH  W+C   + +WR S +G + +  
Sbjct: 994  RCAWDFLPCGQILFNRKIAPTPICPNCHRKAESVLHAVWLCETAKEVWRNSAWGNVCEEW 1053

Query: 301  VALNFDEILWAVKDRLDLQD--------FELMNRRNALIW-GKPYIEDDLMQWASDYVQV 360
               +F E+  A++     ++        + L NRRN+ I+ GK      L+   +   Q 
Sbjct: 1054 RVNSFRELWHALQLSSSGEEQGLFAYLCWGLWNRRNSFIFEGKSETATQLLHRMTKLAQE 1113

Query: 361  FQTVVKPSGGQTKGRLSLGTRGGRPVWNPPLENELKLNVDASVKPDSSLAGGGLILRNGR 411
            F      S     GR S   +     W PP     K+NVD +VK   S+ G G+++RN  
Sbjct: 1114 FSNANNLS-HTIHGRQS-SPQAPLHGWRPPPAGIYKINVDGAVKSGDSVRGVGVVVRNAN 1173

BLAST of Lcy12g006340 vs. ExPASy TrEMBL
Match: A0A803QQT2 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 1.2e-58
Identity = 140/460 (30.43%), Postives = 224/460 (48.70%), Query Frame = 0

Query: 2   ANFWWGGSEESRRTHWMSWESMCLPKCMGGLGFQNMEFFNQALMAKQCWRIFSEPSSLLG 61
           + FWWG  ++ ++ HW  W  +C PK  GGLGF+++  FNQAL+AKQ WR    P  L  
Sbjct: 170 SRFWWGSLDKEKKIHWCKWRYLCRPKDKGGLGFRDLGMFNQALLAKQIWRCLRHPQLLCS 229

Query: 62  LVLKGRYFPNSRFLEAE-------------------------RIGNGRSAPIYSSNWLPN 121
            VLK  YFP    LEA                          R+GNG S  +    WLP 
Sbjct: 230 RVLKASYFPRKGVLEAGCGANASFVWRSLVWGKKLILKGYRWRVGNGESVRVLEDPWLPR 289

Query: 122 EYSLQVHSFPTLPLTSRVK---------DEEKLRNHFTTADCEAIQRIPLCNGLSEDRLI 181
             + +V+  P+LP    V          DE  +R+ F   D + I  IP  +   ED+++
Sbjct: 290 PVTFKVYDQPSLPANLYVTDLKLADGQWDEGFIRSIFNPTDVDLILGIPCSDWDFEDKIL 349

Query: 182 WHFEKNSLFTEKSGYKLAHRLHIQDRPSSSDSAVWQSWWSNAWKLNIPSKIRFFLWRLTH 241
           WH+ K   ++ KSGY++A     +   S+  S V   WW   W+L IP K++ F+W++ H
Sbjct: 350 WHYSKYGEYSVKSGYRMAASFTTEQHQSNEHSIV--QWWKKLWRLKIPPKVKHFVWKVAH 409

Query: 242 NRLPTKINCLKRGMDISNLCVFCQSSFEDCL-HIFWVCPAIEHMWRGSKFGALYQSLVAL 301
           N LP  +N  KRG+  S +C  C S  ++ + H  W C A +  WR S    LY  L  +
Sbjct: 410 NWLPANVNLAKRGIASSVVCSRCSSHVDESVAHALWECKASKGYWRVS---GLYDDLKQM 469

Query: 302 NFDEILWAV--------KDRLD---LQDFELMNRRNALIWGKPYIE-DDLMQWASDYVQV 361
             ++ L  +        K++L+   L  + + N RN ++ G  + + +++++W  +++  
Sbjct: 470 LGEDNLTMLMRIAAEWDKEKLEFFLLVSWNIWNVRNTVVHGGYHPKPEEMIEWCGNFLAD 529

Query: 362 FQTVVKPSGGQTKGRLSLGTRGGRPVWNPPLENELKLNVDASVKPDSSLAGGGLILRNGR 414
           F+     +G +   R S  +R     W PP  +++ +NVDA VK    ++G G ++R+  
Sbjct: 530 FR---GDTGRERSQRSSEDSR-----WVPPARDQVTINVDAGVKQGGLISGLGYVVRDAA 589

BLAST of Lcy12g006340 vs. ExPASy TrEMBL
Match: A0A1S8ACU2 (Ribonuclease H-like superfamily protein OS=Citrus limon OX=2708 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 6.5e-57
Identity = 135/439 (30.75%), Postives = 214/439 (48.75%), Query Frame = 0

Query: 1   MANFWWGGSEESRRTHWMSWESMCLPKCMGGLGFQNMEFFNQALMAKQCWRIFSEPSSLL 60
           +A FWWG  ++ + THW SWE +C  K  GGLGF+++  FNQAL+AKQ WRI   P SL+
Sbjct: 67  IAGFWWGAKKDRKSTHWASWEKLCQAKGRGGLGFRDITSFNQALVAKQSWRIIKYPESLM 126

Query: 61  GLVLKGRYFPNSRFLEAE-------------------------RIGNGRSAPIYSSNWLP 120
             +L+ +YF  + FL+A+                         RIG G    IY S+W+P
Sbjct: 127 AKILQAKYFKGADFLQAKLGSKPSFVWRSIIWGRQVIVNGMRWRIGTGDRVKIYKSHWIP 186

Query: 121 NEYSLQVHSFPTLPLTSRVKD---------EEKLRNHFTTADCEAIQRIPLCNGLSEDRL 180
              + +  S PTL +   V +         E  ++ HF   D E I RI L      D++
Sbjct: 187 RPQAFKPISAPTLGMDCTVAELIDENQKWKESLIQQHFNFEDAELISRIQLPISPKPDQI 246

Query: 181 IWHFEKNSLFTEKSGYKLAHRLHIQDRPSSSDSAVWQSWWSNAWKLNIPSKIRFFLWRLT 240
           +WH++K   ++ KSGY++A R+    RPSSS S + Q  W+  W L +P KI+ F+W+  
Sbjct: 247 LWHYDKKGNYSVKSGYQIAMRIKHPARPSSSSSNLGQ--WNVIWSLELPEKIKIFMWKAA 306

Query: 241 HNRLPTKINCLKRGMDISNLCVFCQSSFEDCLHIFWVCPAIEHMWRGSKFGALYQSLVAL 300
            N LPT  N  +R M    +C  C+   ED  H   VC A + MW+ + F    Q L   
Sbjct: 307 RNFLPTSENLWRRKMVQEPICPRCKMKKEDINHAIMVCKAAKKMWKLTPFVEEMQLLDNQ 366

Query: 301 NFDEILWAVKDRLDLQDFELM--------NRRNALIWGKPYIEDDLMQWASDYVQVFQTV 360
           +   +L  + +R    +  L+        + RN  ++     +  +    ++ V      
Sbjct: 367 DLLSMLQELVNRRSKDELRLIIALCWTAWHTRNIFVFENKRQDPQISVAKAEAVVESYAR 426

Query: 361 VKPSGGQTKGRLSLGTRGGRPVWNPPLENELKLNVDASVKPDSSLAGGGLILRNGRGDVL 398
           V+ +  Q   + ++  +G +  W PP +   K NVDA+V  + +  G G+++R+  G ++
Sbjct: 427 VRMTKVQAAAK-AIPAKGAK--WIPPPQGHFKANVDAAVNKEKNQVGLGVVIRDDSGAII 486

BLAST of Lcy12g006340 vs. ExPASy TrEMBL
Match: A0A803P4T9 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 8.5e-57
Identity = 145/431 (33.64%), Postives = 196/431 (45.48%), Query Frame = 0

Query: 1   MANFWWGGSEESRRTHWMSWESMCLPKCMGGLGFQNMEFFNQALMAKQCWRIFSEPSSLL 60
           MANFWWG ++   R HW  W+S+C  K  GG+GF++   FNQAL+AKQ WRIF  P SLL
Sbjct: 82  MANFWWGSNQNGTRIHWKRWKSLCKSKYEGGMGFRSFVHFNQALLAKQAWRIFDMPDSLL 141

Query: 61  GLVLKGRYFPNSRFLEAE-------------------------RIGNGRSAPIYSSNWLP 120
             +LK RYF N  FLEA                          ++GNG         W+P
Sbjct: 142 SRLLKYRYFSNCSFLEANIGHSPSLTWQSICWGKELLVKGLRYKVGNGTHIDCKHDPWIP 201

Query: 121 --NEY---------SLQVHSFPTLPLTSRVKDEEKLRNHFTTADCEAIQRIPLCNGLSED 180
             NE+         SL V SF T     RV D   L  +F   D + I  IPL      D
Sbjct: 202 GFNEFKPVSFIGSHSLPVSSFIT---EDRVWDLPMLNRYFQPIDSDRILSIPLSFFADRD 261

Query: 181 RLIWHFEKNSLFTEKSGYKLAHRLHIQDRPSSSDSAVWQSWWSNAWKLNIPSKIRFFLWR 240
           RLIWH+  N  +T +SG+ LA+ L  Q   S+SD+     WW   W L +P KIR F+W+
Sbjct: 262 RLIWHYTSNGSYTVQSGFHLANSLEEQLNSSTSDNQ--SIWWKFFWNLTLPPKIRIFVWK 321

Query: 241 LTHNRLPTKINCLKRGMDISNLCVFCQSSFEDCLHIFWVCPAIEHMWRGSKFGALYQSLV 300
           + HN LPT     K+ +  S  C  C SS+E   H  + C   + +WR SKF   +    
Sbjct: 322 VLHNILPTAAALFKKKVLTSAECSLCASSWESIGHALFGCKHAKAIWRSSKFQLDFSRAQ 381

Query: 301 ALNFDEILWAVKDRLDLQDFELM---------NRRNALIWGKPYIEDDLMQWASDYVQVF 360
            +   + L  +   L   DFELM         +R   +  G P     ++ +A  +++ F
Sbjct: 382 NMFNGDYLLNLSTVLSQPDFELMLCILWGIWTDRNKVVHGGTPRQPTAIVNYAVRFLEDF 441

Query: 361 QTVVKPS------GGQTKGRLSLGTRGGRPVWNPPLENELKLNVDASVKPDSSLAGGGLI 381
               K S        +     S  T      W PP  N  K+NVDA+   +    G G +
Sbjct: 442 TRARKCSPPAAAISSEFPATSSTATVQQAAKWQPPQLNGFKMNVDAATNEEHKKLGIGAL 501

BLAST of Lcy12g006340 vs. NCBI nr
Match: XP_022150918.1 (uncharacterized protein LOC111018954 [Momordica charantia])

HSP 1 Score: 327.0 bits (837), Expect = 2.3e-85
Identity = 179/451 (39.69%), Postives = 256/451 (56.76%), Query Frame = 0

Query: 2    ANFWWGGSEESRRTHWMSWESMCLPKCMGGLGFQNMEFFNQALMAKQCWRIFSEPSSLLG 61
            A FWWG S+E ++ HW++W S+ LPKC GG+GF+++E FN+AL+AKQCWRI + P+S+L 
Sbjct: 616  ARFWWGSSKEDKKIHWVAWNSLYLPKCEGGMGFRDLELFNKALLAKQCWRILNHPNSMLS 675

Query: 62   LVLKGRYFPNSRFLEAE-------------------------RIGNGRSAPIYSSNWLPN 121
             VLKGRYF +  F+EA+                         RIGNG S  IY  NW+PN
Sbjct: 676  RVLKGRYFKDCSFMEAKISGNPSYIWRSILWGRDLLKKGLRWRIGNGDSVFIYGDNWVPN 735

Query: 122  EYSLQVHSFPTLPLTSRVK---DEEK-------LRNHFTTADCEAIQRIPLCNGLSEDRL 181
            + +L++ S P LPL SRV    D E+       +R+ FT  + + I  IP+  G  EDRL
Sbjct: 736  QPTLKILSSPRLPLVSRVSSLVDHEEGGWQGDVVRDEFTPDEAKGILSIPIGRGAEEDRL 795

Query: 182  IWHFEKNSLFTEKSGYKLAHRLH-IQDRPSSSDSAVWQSWWSNAWKLNIPSKIRFFLWRL 241
            IW++EK  +++ +SGYK+A   +     PSSS S   + WW+  WK++IP+KI+ FLWRL
Sbjct: 796  IWNYEKTGVYSVRSGYKVALLNNPCVQAPSSSSSEEVRCWWNGFWKMHIPNKIKVFLWRL 855

Query: 242  THNRLPTKINCLKRGMDISNLCVFCQSSFEDCLHIFWVCPAIEHMWRGSKFGALYQSLVA 301
              +RLPT  N  KRG++I+N C FC  + ED +H+FW+C   E +W  SKFG L   L+ 
Sbjct: 856  CLDRLPTGCNLSKRGVEITNCCYFCGRNGEDSIHLFWICKFAEALWINSKFGKLSPFLIL 915

Query: 302  LNFDEIL-WAVKDRLDLQDFELMNRRNALIWGKP-----YIEDDLMQWASDYVQVFQTVV 361
                E L  A  + L +  + L N+RNA  +         I  +L++WA+ Y   F+   
Sbjct: 916  RESHESLSKADFEELCVVIWGLWNQRNARAFNDSTKTVFKIGMELVEWANKYAMEFR--- 975

Query: 362  KPSGGQTKGRLSLGTRGGRPVWNPPLENELKLNVDASVKPDSSLAGGGLILRNGRGDVLM 410
            +       GR+   T     +W PP E   K+N DAS       AG G+I+ N RG V+ 
Sbjct: 976  EAKSNPITGRV---TNTAEILWQPPDEGIYKINTDASFLASDQHAGLGIIIHNDRGQVMA 1035

BLAST of Lcy12g006340 vs. NCBI nr
Match: XP_024956542.1 (uncharacterized protein LOC112498908 [Citrus sinensis])

HSP 1 Score: 255.4 bits (651), Expect = 8.7e-64
Identity = 156/450 (34.67%), Postives = 222/450 (49.33%), Query Frame = 0

Query: 1    MANFWWGGSEESRRTHWMSWESMCLPKCMGGLGFQNMEFFNQALMAKQCWRIFSEPSSLL 60
            + NFWWG S E R  HW  WE M   KC GG+GF++   FNQAL+AKQ WRI   P SL+
Sbjct: 592  VGNFWWGSSRERRSIHWSKWEKMSQAKCKGGMGFRDFASFNQALLAKQGWRIQQCPDSLV 651

Query: 61   GLVLKGRYFPNSRFLEAE-------------------------RIGNGRSAPIYSSNWLP 120
              VL+ RYF +S FL A+                         RIGNG+   I+ +NW+P
Sbjct: 652  ARVLQARYFHSSNFLNAKIGSNPSYIWRSILWGRQIICGGSRWRIGNGQDVHIHKANWIP 711

Query: 121  NEYSLQVHSFPTLPLTSRVK---------DEEKLRNHFTTADCEAIQRIPLCNGLSEDRL 180
              ++ +    PT+P  + V          DEE +  HF   D + I +IPL   L ED L
Sbjct: 712  KPFTFKPVIKPTMPSEALVSELINGENCWDEELIYKHFDKMDADVITQIPLPRRLREDEL 771

Query: 181  IWHFEKNSLFTEKSGYKLAHRLHIQDRPSSSDSAVWQSWWSNAWKLNIPSKIRFFLWRLT 240
            IWHF K+  +T KSGY+ A ++     PSSS+S+  ++ W+  W L +P KIR F+WR  
Sbjct: 772  IWHFGKSGQYTVKSGYQRALKIRFPAMPSSSESS--KNEWNIIWSLALPKKIRIFVWRAA 831

Query: 241  HNRLPTKINCLKRGMDISNLCVFCQSSFEDCLHIFWVCPAIEHMWRGSKFGALYQSLVAL 300
             N LP+  N  KR +     C  C+   E+  H    C A + +WR S F    Q+    
Sbjct: 832  KNLLPSAENLWKRKIVQEPTCQLCKMGIENVFHALVDCKAAKKVWRLSLFYIDIQAAPGQ 891

Query: 301  NFDEILWAVK---DRLDLQDFELM-----NRRNA-LIWGKPYIEDDLMQWASDYVQVFQT 360
            +   +L  VK      D+  F +M     N RN  L  GK      ++  A   ++ ++ 
Sbjct: 892  DILSLLHGVKRMRSNADVDLFAVMLWAKWNARNQWLFKGKRENPQSVVAKAEAVMEAYKR 951

Query: 361  VVKPSGGQTKGRLSLGTRGGRPVWNPPLENELKLNVDASVKPDSSLAGGGLILRNGRGDV 407
             V+PS   + G+     + G   WNPP E  +K+N DA+   + +LAG G ++R+  G V
Sbjct: 952  -VQPSADVSHGKQQKVAQLG---WNPPQEGFVKINTDAATNSEKNLAGLGAVIRDENGQV 1011

BLAST of Lcy12g006340 vs. NCBI nr
Match: VVA32947.1 (PREDICTED: retrotransposon [Prunus dulcis])

HSP 1 Score: 241.1 bits (614), Expect = 1.7e-59
Identity = 149/458 (32.53%), Postives = 221/458 (48.25%), Query Frame = 0

Query: 1    MANFWWGGSEESRRTHWMSWESMCLPKCMGGLGFQNMEFFNQALMAKQCWRIFSEPSSLL 60
            MA FWW  +++ R  HW+ WE +C  K  GGLGF+++E FNQAL+AKQCWRI   P SL+
Sbjct: 754  MARFWWAKAKDKRGIHWVKWELLCKSKFAGGLGFRDLEAFNQALLAKQCWRILRTPESLV 813

Query: 61   GLVLKGRYFPNSRFLEAE-------------------------RIGNGRSAPIYSSNWLP 120
              + + RY P+  FLEAE                         R+GNG S  +Y+  WLP
Sbjct: 814  ARIFRARYHPSVPFLEAEVGTNPSFIWRSLQWGKELLNKGLRWRVGNGVSIQVYTDKWLP 873

Query: 121  NEYSLQVHSFPTLPLTSRVKD---------EEKLRNHFTTADCEAIQRIPLCNGLSEDRL 180
                 ++ S P LPL++ V D            L++ F   + +A  +IPL +    D L
Sbjct: 874  APSFFKIMSPPQLPLSTLVCDLFTSSGQWNVPLLKDIFWDQEVDAKLQIPLASLAGHDCL 933

Query: 181  IWHFEKNSLFTEKSGYKLAHRLHIQDRPSSSDSA---VWQSWWSNAWKLNIPSKIRFFLW 240
            IWH+E+N +++ KSGY+LA     +D+ S   S    +   +W   W L IP+KI+FFLW
Sbjct: 934  IWHYERNGMYSVKSGYRLA--CLEKDKMSGEPSVRVDLNSKFWKKIWALKIPNKIKFFLW 993

Query: 241  RLTHNRLPTKINCLKRGMDISNLCVFCQSSFEDCLHIFWVCPAIEHMWRGSKFGALYQSL 300
            R   + LP       R +  + +C  C    E  LH  W+C   + +WR S +G + +  
Sbjct: 994  RCAWDFLPCGQILFNRKIAPTPICPNCHRKAESVLHAVWLCETAKEVWRNSAWGNVCEEW 1053

Query: 301  VALNFDEILWAVKDRLDLQD--------FELMNRRNALIW-GKPYIEDDLMQWASDYVQV 360
               +F E+  A++     ++        + L NRRN+ I+ GK      L+   +   Q 
Sbjct: 1054 RVNSFRELWHALQLSSSGEEQGLFAYLCWGLWNRRNSFIFEGKSETATQLLHRMTKLAQE 1113

Query: 361  FQTVVKPSGGQTKGRLSLGTRGGRPVWNPPLENELKLNVDASVKPDSSLAGGGLILRNGR 411
            F      S     GR S   +     W PP     K+NVD +VK   S+ G G+++RN  
Sbjct: 1114 FSNANNLS-HTIHGRQS-SPQAPLHGWRPPPAGIYKINVDGAVKSGDSVRGVGVVVRNAN 1173

BLAST of Lcy12g006340 vs. NCBI nr
Match: XP_024950112.1 (uncharacterized protein LOC112496847 [Citrus sinensis])

HSP 1 Score: 236.5 bits (602), Expect = 4.2e-58
Identity = 147/453 (32.45%), Postives = 211/453 (46.58%), Query Frame = 0

Query: 1    MANFWWGGSEESRRTHWMSWESMCLPKCMGGLGFQNMEFFNQALMAKQCWRIFSEPSSLL 60
            +A FWWG   + R  HW  WE +   K  GGLGF+    FNQAL+AKQ WR+   P+SL+
Sbjct: 857  IAKFWWGSKGDKRGIHWRKWEKLSQAKIRGGLGFREFSCFNQALVAKQAWRLLQYPNSLV 916

Query: 61   GLVLKGRYFPNSRFLEAE-------------------------RIGNGRSAPIYSSNWLP 120
              VL+ RYF NS FL A+                         RIGNG+   I+S NWLP
Sbjct: 917  SRVLQARYFRNSSFLCAKAGANASYIWRSIMWGRQVIKKGMRWRIGNGKKIAIFSDNWLP 976

Query: 121  NEYSLQVHSFPTLPLTSRVK---------DEEKLRNHFTTADCEAIQRIPLCNGLSEDRL 180
               + +     +LP++S V          DE KLR HF   D   I +IPL    +ED +
Sbjct: 977  RPETFRPIFPLSLPVSSVVADLIKADNQWDEIKLRQHFLDVDTAEILKIPLPAEKAEDEV 1036

Query: 181  IWHFEKNSLFTEKSGYKLAHRLHIQDRPSSSDSAVWQSWWSNAWKLNIPSKIRFFLWRLT 240
            +WH++K   ++ KSGY+LA R    D  S ++++    +WS  W L +P K++ F+WR +
Sbjct: 1037 LWHYDKRGNYSVKSGYQLALRSKFPDSTSCTEAS--HKYWSALWTLELPEKLKIFMWRAS 1096

Query: 241  HNRLPTKINCLKRGMDISNLCVFCQSSFEDCLHIFWVCPAIEHMWRGSKFGALYQSLVAL 300
            +N LP+  N  KR +     C  C+ S E   H    C A   +W  S F A      + 
Sbjct: 1097 NNLLPSAENLWKRKVVEEPTCKRCKLSVETISHALLECKAARKIWLQSPFSAPRLEANSQ 1156

Query: 301  NFDEILWAVKDRLDLQDFELMNRRNALIWGKPYIEDDLM------------QWASDYVQV 360
            +    L  +   L   D ELM    AL W   Y  +  +              A   +  
Sbjct: 1157 DIFSTLQNMAKELRKSDLELM---VALCWSAWYARNKCIFDGRELNPIISAAKAESVLTA 1216

Query: 361  FQTVVKPSGGQTKGRLSLGTRGGRPVWNPPLENELKLNVDASVKPDSSLAGGGLILRNGR 407
            FQ V KP     +  +S+  +  +  W PP +N  K+NVDA+    +  AG G ++R+  
Sbjct: 1217 FQRVRKPQ----QSHISISIKEKQQEWLPPPQNVFKVNVDAAFNSKNLSAGVGAVIRDSN 1276

BLAST of Lcy12g006340 vs. NCBI nr
Match: XP_023889222.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC112001275 [Quercus suber])

HSP 1 Score: 234.2 bits (596), Expect = 2.1e-57
Identity = 142/457 (31.07%), Postives = 224/457 (49.02%), Query Frame = 0

Query: 4    FWWGGSEESRRTHWMSWESMCLPKCMGGLGFQNMEFFNQALMAKQCWRIFSEPSSLLGLV 63
            FWWG   E R+ HW  W S+C PK +GG+GF++++ FN+A++AKQ WR+ +   SL    
Sbjct: 1096 FWWGQRGEQRKIHWSKWSSLCKPKTLGGMGFRDLQKFNEAMLAKQVWRLLTNEDSLFYRF 1155

Query: 64   LKGRYFPNSRFLEAE------------------------RIGNGRSAPIYSSNWLPNEYS 123
             K ++FPN   LEAE                        R+GNG S  IY  NWLP+   
Sbjct: 1156 FKAKFFPNGSILEAEEGNGSFAWKSILKGRVIIQKGMLWRVGNGSSIQIYHDNWLPDPSL 1215

Query: 124  LQVHSFP-----------TLPLTSRVKDEEKLRNHFTTADCEAIQRIPLCNGLSEDRLIW 183
             ++ S P            + +  +   +E +  +F  ++   I+ IPLC G   D   W
Sbjct: 1216 KKIISKPFHFDNHEKVSSLMAIGGQCWSQEVIDPNFLPSEAAIIKAIPLCFGECIDVRTW 1275

Query: 184  HFEKNSLFTEKSGYKLAHRLHIQDRPSSSDSAVWQSWWSNAWKLNIPSKIRFFLWRLTHN 243
                + +++ KSGY+L     I ++P SSD +  +  W   W L +P++++  LWR   +
Sbjct: 1276 PLNTDGIYSVKSGYQLLVEQEINEQPRSSDLSKTKRLWKGIWSLKVPNRVKSLLWRAGSD 1335

Query: 244  RLPTKINCLKRGMDISNLCVFCQSSFEDCLHIFWVCPAIEHMWRGSKFGALYQSL-VALN 303
             LP+K N  KR + I   C  C    E  LH  W CP++E +W+   FG L  +  +  +
Sbjct: 1336 SLPSKSNLKKRKIPIDATCSSCGMDPETSLHAIWSCPSLEQIWK-VHFGWLVNAASMTAS 1395

Query: 304  FDEILWAVKDRLDLQDF------ELMNRRNALIWGKPYIEDDLM-QWASDYVQVF-QTVV 363
            F ++L    ++ +L D       ++  RRN L  G+     D++ Q AS  +QVF Q+ +
Sbjct: 1396 FLDVLQLCSEKSNLVDLFVMTVSQIWTRRNKLRVGEDAAPLDMINQLASASLQVFIQSSL 1455

Query: 364  KPSGGQTKGRLSLGTRGGRPVWNPPLENELKLNVDASVKPDSSLAGGGLILRNGRGDVLM 415
             P+   +  +++         W PP  N +K+N D +   D S AG G I+RN  G ++M
Sbjct: 1456 NPTKVPSPPKVT--------KWLPPPSNWVKINFDGATFSDLSSAGLGAIIRNDLG-LVM 1515

BLAST of Lcy12g006340 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 145.6 bits (366), Expect = 9.0e-35
Identity = 116/462 (25.11%), Postives = 188/462 (40.69%), Query Frame = 0

Query: 1   MANFWWGGSEESRRTHWMSWESMCLPKCMGGLGFQNMEFFNQALMAKQCWRIFSEPSSLL 60
           +A+FWW   +E++  HW +W+ +   K  GG+GF+++E FN AL+ KQ WR+ S P SL+
Sbjct: 25  LADFWWRNKQEAKGMHWKAWDHLSCYKAEGGIGFKDIEAFNLALLGKQMWRMLSRPESLM 84

Query: 61  GLVLKGRYFPNSRFLEAER-------------------------IGNGRSAPIYSSNWL- 120
             V K RYF  S  L A                           +GNG    I+   WL 
Sbjct: 85  AKVFKSRYFHKSDPLNAPLGSRPSFVWKSIHASQEILRQGARAVVGNGEDIIIWRHKWLD 144

Query: 121 --PNEYSLQVHSFPTLPLTS-----RVKD----------EEKLRNHFTTADCEAIQRIPL 180
             P   +L++   P     S     +V D          ++ +   F   + + I  +  
Sbjct: 145 SKPASAALRMQRVPPQEYASVSSILKVSDLIDESGREWRKDVIEMLFPEVERKLIGELRP 204

Query: 181 CNGLSEDRLIWHFEKNSLFTEKSGY-KLAHRLHIQDRPSSSDSAVWQSWWSNAWKLNIPS 240
                 D   W +  +  +T KSGY  L   ++ +  P           +   WK     
Sbjct: 205 GGRRILDSYTWDYTSSGDYTVKSGYWVLTQIINKRSSPQEVSEPSLNPIYQKIWKSQTSP 264

Query: 241 KIRFFLWRLTHNRLPTKINCLKRGMDISNLCVFCQSSFEDCLHIFWVCPAIEHMWRGSK- 300
           KI+ FLW+   N LP       R +   + C+ C S  E   H+ + C      W  S  
Sbjct: 265 KIQHFLWKCLSNSLPVAGALAYRHLSKESACIRCPSCKETVNHLLFKCTFARLTWAISSI 324

Query: 301 ---FGALYQSLVALNFDEIL--------WAVKDRL-DLQDFELMNRRNALIW-GKPYIED 360
               G  +   + +N   +         W    +L     + L   RN L++ G+ +   
Sbjct: 325 PIPLGGEWADSIYVNLYWVFNLGNGNPQWEKASQLVPWLLWRLWKNRNELVFRGREFNAQ 384

Query: 361 DLMQWASDYVQVFQTVVKPSGGQTKGRLSLGTRGGRPVWNPPLENELKLNVDASVKPDSS 400
           ++++ A D ++ ++   +     TK +++  + G    W PP    +K N DA+   D+ 
Sbjct: 385 EVLRRAEDDLEEWRIRTEAESCGTKPQVNRSSCGR---WRPPPHQWVKCNTDATWNRDNE 444

BLAST of Lcy12g006340 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 82.8 bits (203), Expect = 7.2e-16
Identity = 35/77 (45.45%), Postives = 52/77 (67.53%), Query Frame = 0

Query: 1   MANFWWGGSEESRRTHWMSWESMCLPK-CMGGLGFQNMEFFNQALMAKQCWRIFSEPSSL 60
           M  FWW   E  R+  W++W+ +C  K   GGLGF+++ +FNQAL+AKQ +RI  +P +L
Sbjct: 25  MTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRDLGWFNQALLAKQSFRIIHQPHTL 84

Query: 61  LGLVLKGRYFPNSRFLE 77
           L  +L+ RYFP+S  +E
Sbjct: 85  LSRLLRSRYFPHSSMME 101

BLAST of Lcy12g006340 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 77.0 bits (188), Expect = 3.9e-14
Identity = 66/274 (24.09%), Postives = 101/274 (36.86%), Query Frame = 0

Query: 116 DEEKLRNHFTTADCEAIQRIPLCNGLSEDRLIWHFEKNSLFTEKSGYKLAHRLHIQDRPS 175
           D+ K+      +D   I RI L      D++IW++     +T +SGY L       + P+
Sbjct: 89  DDSKISQFVDQSDHGFIHRIYLAKSKKPDKIIWNYNTTGEYTVRSGYWLLTHDPSTNIPA 148

Query: 176 SSDSAVWQSWWSNAWKLNIPSKIRFFLWRLTHNRLPTKINCLKRGMDISNLCVFCQSSFE 235
            +         +  W L I  K++ FLWR     L T      RGM I   C  C    E
Sbjct: 149 INPPHGSIDLKTRIWNLPIMPKLKHFLWRALSQALATTERLTTRGMRIDPSCPRCHRENE 208

Query: 236 DCLHIFWVCPAIEHMWRGSKFGALYQSLVALNFDE----ILWAVKDRLDLQDF------- 295
              H  + CP     WR S    +   L++ +F+E    IL  V+D   + DF       
Sbjct: 209 SINHALFTCPFATMAWRLSDSSLIRNQLMSNDFEENISNILNFVQD-TTMSDFHKLLPVW 268

Query: 296 ---ELMNRRNALIWGKPYIEDDLMQWASDYVQVFQTVVKPSGGQTKGRLSLGTRGGRPVW 355
               +   RN +++ K + E       S   +    +      +     +      +  W
Sbjct: 269 LIWRIWKARNNVVFNK-FRESPSKTVLSAKAETHDWLNATQSHKKTPSPTRQIAENKIEW 328

Query: 356 NPPLENELKLNVDASVKPDSSLAGGGLILRNGRG 376
             P    +K N DA        A GG I+RN  G
Sbjct: 329 RNPPATYVKCNFDAGFDVQKLEATGGWIIRNHYG 360

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P0C2F69.1e-2423.38Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1... [more]
P932951.0e-1445.45Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 ... [more]
Match NameE-valueIdentityDescription
A0A6J1DAR41.1e-8539.69uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
A0A5E4FZN98.2e-6032.53PREDICTED: retrotransposon OS=Prunus dulcis OX=3755 GN=ALMOND_2B007697 PE=4 SV=1[more]
A0A803QQT21.2e-5830.43Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A1S8ACU26.5e-5730.75Ribonuclease H-like superfamily protein OS=Citrus limon OX=2708 PE=4 SV=1[more]
A0A803P4T98.5e-5733.64Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_022150918.12.3e-8539.69uncharacterized protein LOC111018954 [Momordica charantia][more]
XP_024956542.18.7e-6434.67uncharacterized protein LOC112498908 [Citrus sinensis][more]
VVA32947.11.7e-5932.53PREDICTED: retrotransposon [Prunus dulcis][more]
XP_024950112.14.2e-5832.45uncharacterized protein LOC112496847 [Citrus sinensis][more]
XP_023889222.12.1e-5731.07LOW QUALITY PROTEIN: uncharacterized protein LOC112001275 [Quercus suber][more]
Match NameE-valueIdentityDescription
AT4G29090.19.0e-3525.11Ribonuclease H-like superfamily protein [more]
ATMG00310.17.2e-1645.45RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
AT3G09510.13.9e-1424.09Ribonuclease H-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 352..411
e-value: 1.3E-8
score: 34.6
IPR026960Reverse transcriptase zinc-binding domainPFAMPF13966zf-RVTcoord: 159..251
e-value: 3.7E-17
score: 62.8
NoneNo IPR availablePANTHERPTHR46736:SF6SUBFAMILY NOT NAMEDcoord: 75..410
NoneNo IPR availablePANTHERPTHR46736FAMILY NOT NAMEDcoord: 75..410

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy12g006340.1Lcy12g006340.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity