Lcy12g006270 (gene) Sponge gourd (P93075) v1

Overview
NameLcy12g006270
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionCCHC-type domain-containing protein
LocationChr12: 27401875 .. 27402540 (+)
RNA-Seq ExpressionLcy12g006270
SyntenyLcy12g006270
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTAAGAATAACAGCTAACGAAAGAAAGAACATCTTGGCTATTGAGGATGATGAGCTGGAGGAAGCAGCGGATGACCTCCAAGGAGCAATTCTCTGCAAAATCCACACACCAAAAATGATCAGTCCGGAAATCTTTAAGACATTTATGCCTAAAATATGGAATAAGGAAGGGAAAGTCAGAATAAAGACAGTAGGAAGAAATATCTTCAAGTGCATATTCAACAACAACCAAGAAAAGGAAAGAATTGTTAAAGGAGGACCATGGAGCTTTGATAAAGCCATTGTTCTTACCGAGGAGCCAACAGGGGACTGCAGAATCTCTAATACTCAATTCAAATATGCAATATTCTGGATCATATTTCATGACTTACTTATGGTTTGTATGTGCAGGAAATGGGCGATCGTGCTGGGCAACCTGCTAGGAAAATTCGAAGAAGTGGACTGGGATATAGAAGATAAAAGATGGGAAAATTCCTTGAGAATCAGAGTTGAGGTCGATATATCAAAACCTTTGAAAAGAGGGGTGGTTGCTAAGATAGGATCAAAAGCCGAAGATTCCTGGATCAAGGTTACATACGAAAGACTCCCCGACTACTGTTATGGATGTGGAAGAGTAGGTCATGTCCAGAACGAATGTGAAGAACCAAATCAAACAAATGAATAG

mRNA sequence

ATGCTAAGAATAACAGCTAACGAAAGAAAGAACATCTTGGCTATTGAGGATGATGAGCTGGAGGAAGCAGCGGATGACCTCCAAGGAGCAATTCTCTGCAAAATCCACACACCAAAAATGATCAGTCCGGAAATCTTTAAGACATTTATGCCTAAAATATGGAATAAGGAAGGGAAAGTCAGAATAAAGACAGTAGGAAGAAATATCTTCAAGTGCATATTCAACAACAACCAAGAAAAGGAAAGAATTGTTAAAGGAGGACCATGGAGCTTTGATAAAGCCATTGTTCTTACCGAGGAGCCAACAGGGGACTGCAGAATCTCTAATACTCAATTCAAATATGCAATATTCTGGATCATATTTCATGACTTACTTATGGTTTGTATGTGCAGGAAATGGGCGATCGTGCTGGGCAACCTGCTAGGAAAATTCGAAGAAGTGGACTGGGATATAGAAGATAAAAGATGGGAAAATTCCTTGAGAATCAGAGTTGAGGTCGATATATCAAAACCTTTGAAAAGAGGGGTGGTTGCTAAGATAGGATCAAAAGCCGAAGATTCCTGGATCAAGGTTACATACGAAAGACTCCCCGACTACTGTTATGGATGTGGAAGAGTAGGTCATGTCCAGAACGAATGTGAAGAACCAAATCAAACAAATGAATAG

Coding sequence (CDS)

ATGCTAAGAATAACAGCTAACGAAAGAAAGAACATCTTGGCTATTGAGGATGATGAGCTGGAGGAAGCAGCGGATGACCTCCAAGGAGCAATTCTCTGCAAAATCCACACACCAAAAATGATCAGTCCGGAAATCTTTAAGACATTTATGCCTAAAATATGGAATAAGGAAGGGAAAGTCAGAATAAAGACAGTAGGAAGAAATATCTTCAAGTGCATATTCAACAACAACCAAGAAAAGGAAAGAATTGTTAAAGGAGGACCATGGAGCTTTGATAAAGCCATTGTTCTTACCGAGGAGCCAACAGGGGACTGCAGAATCTCTAATACTCAATTCAAATATGCAATATTCTGGATCATATTTCATGACTTACTTATGGTTTGTATGTGCAGGAAATGGGCGATCGTGCTGGGCAACCTGCTAGGAAAATTCGAAGAAGTGGACTGGGATATAGAAGATAAAAGATGGGAAAATTCCTTGAGAATCAGAGTTGAGGTCGATATATCAAAACCTTTGAAAAGAGGGGTGGTTGCTAAGATAGGATCAAAAGCCGAAGATTCCTGGATCAAGGTTACATACGAAAGACTCCCCGACTACTGTTATGGATGTGGAAGAGTAGGTCATGTCCAGAACGAATGTGAAGAACCAAATCAAACAAATGAATAG

Protein sequence

MLRITANERKNILAIEDDELEEAADDLQGAILCKIHTPKMISPEIFKTFMPKIWNKEGKVRIKTVGRNIFKCIFNNNQEKERIVKGGPWSFDKAIVLTEEPTGDCRISNTQFKYAIFWIIFHDLLMVCMCRKWAIVLGNLLGKFEEVDWDIEDKRWENSLRIRVEVDISKPLKRGVVAKIGSKAEDSWIKVTYERLPDYCYGCGRVGHVQNECEEPNQTNE
Homology
BLAST of Lcy12g006270 vs. ExPASy TrEMBL
Match: A0A6J1D765 (uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017902 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 3.3e-36
Identity = 71/211 (33.65%), Postives = 122/211 (57.82%), Query Frame = 0

Query: 5   TANERKNILAIEDDELEEAADDLQGAILCKIHTPKMISPEIFKTFMPKIWNKEGKVRIKT 64
           + N+    + I+  +    AD+++  ++ K+HT K IS E  ++ M  +W      R + 
Sbjct: 13  STNDENETVTIDRGKPILTADNVKLCVVAKLHTSKRISAEAIRSVMKSVWRVHNSTRFEP 72

Query: 65  VGRNIFKCIFNNNQEKERIVKGGPWSFDKAIVLTEEPTGDCRISNTQFKYAIFWIIFHDL 124
           +G NI+  +F +  EK R++  GPW+F+K++++   PT   +  +  F +  FWI  H++
Sbjct: 73  LGMNIYVILFKSLSEKSRVLSSGPWTFNKSLLVLTSPTATNQPLDMNFNFCAFWIQIHNI 132

Query: 125 LMVCMCRKWAIVLGNLLGKFEEVDWDIEDKRWENSLRIRVEVDISKPLKRGVVAKIGSKA 184
              C+  + A +LG  LG  EE++ D  D      +R+RV++D+SKPL+RG+  K  S  
Sbjct: 133 PFECISTEMANILGAKLGDVEEIEGDGADGWAGPFIRVRVKIDVSKPLRRGIKLK-NSDG 192

Query: 185 EDSWIKVTYERLPDYCYGCGRVGHVQNECEE 216
           +D W  + YE+LPD+CY CG++GH   ECE+
Sbjct: 193 KDIWCPLRYEKLPDFCYECGKIGHSGRECEQ 222

BLAST of Lcy12g006270 vs. ExPASy TrEMBL
Match: A0A5C7I6E5 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_011844 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 7.4e-36
Identity = 72/185 (38.92%), Postives = 115/185 (62.16%), Query Frame = 0

Query: 31  ILCKIHTPKMISPEIFKTFMPKIWNKEGKVRIKTVGRNIFKCIFNNNQEKERIVKGGPWS 90
           I+ K+ T +++  E+F   M KIW   G V I+ +  NIF   F N++++ R+++GGPWS
Sbjct: 41  IVGKVLTSRLVKKEVFIDVMSKIWRVSGGVDIEPIKGNIFAFYFTNDEDRMRVLRGGPWS 100

Query: 91  FDKAIVLTEEPTGDCRISNTQFKYAIFWIIFHDLLMVCMCRKWAIVLGNLLGKFEEVDWD 150
           FD+AI++ +EPTG   ISN +F Y  FW+  H+L ++CM  +  I LG+L+G+  + D  
Sbjct: 101 FDRAIIIFDEPTGTRDISNLRFNYVDFWVQIHNLPLLCMNEEIGITLGSLIGEVRDYDSG 160

Query: 151 IEDKRWENSLRIRVEVDISKPLKRGVVAKIGSKAEDSWIKVTYERLPDYCYGCGRVGHVQ 210
           I        +R+RV + + KPL+R +   +    + S + + YERL DYC+ CGR+GH+ 
Sbjct: 161 ITSDASGRYIRVRVTIPVDKPLQRSLRVDLLGDEKISTMLLRYERLLDYCFKCGRLGHLL 220

Query: 211 NECEE 216
           +EC E
Sbjct: 221 DECVE 225

BLAST of Lcy12g006270 vs. ExPASy TrEMBL
Match: A0A5C7IU01 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_001178 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 6.3e-35
Identity = 74/210 (35.24%), Postives = 127/210 (60.48%), Query Frame = 0

Query: 6   ANERKNILAIEDDELEEAADDLQGAILCKIHTPKMISPEIFKTFMPKIWNKEGKVRIKTV 65
           A+E   +L + ++ + +  +D+   ++ K+ T K I+ E FK  + +IW+  G+V ++ V
Sbjct: 16  ADEDGAVLEMTEEVVVDGKEDIDQCLVGKVLTGKKINREAFKGLIEQIWSPYGQVEVELV 75

Query: 66  GRNIFKCIFNNNQEKERIVKGGPWSFDKAIVLTEEPTGDCRISNTQFKYAIFWIIFHDLL 125
           G N+F   F N  +++R+ + GPW F  +++  E+ +G   ++N +F  A FWI  HD+ 
Sbjct: 76  GDNVFMFYFINRADRDRVWRRGPWHFGNSLISLEKTSGLGNVANIEFNRADFWIQIHDIP 135

Query: 126 MVCMCRKWAIVLGNLLGKFEEVDWDIEDKR--WENSLRIRVEVDISKPLKRGVVAKIGSK 185
           ++CM R+ A  L   +G+  E+   + + R  W N LR++V +DISKPLKR +  K+G+ 
Sbjct: 136 ILCMNRRTARWLAEQIGEVVEI---LSESRECWGNFLRVKVRIDISKPLKRWLRLKLGAS 195

Query: 186 AEDSWIKVTYERLPDYCYGCGRVGHVQNEC 214
            E   + + YERLP++CY CGR+GH   EC
Sbjct: 196 KEIIVVGLKYERLPEFCYACGRIGHGIKEC 222

BLAST of Lcy12g006270 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 1.1e-34
Identity = 72/212 (33.96%), Postives = 123/212 (58.02%), Query Frame = 0

Query: 3   RITANERKNILAIEDDELEEAADDLQGAILCKIHTPKMISPEIFKTFMPKIWNKEGKVRI 62
           ++T+ E +  + ++ D ++ A   L  +++ K+   ++IS ++    +   W  E ++ +
Sbjct: 14  KLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRVLLLAWKVEHQLTV 73

Query: 63  KTVGRNIFKCIFNNNQEKERIVKGGPWSFDKAIVLTEEPTGDCRISNTQFKYAIFWIIFH 122
           +++G+N+F   F    +  R++K GPW FDKA+++ ++P     IS  +F    FWI   
Sbjct: 74  ESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISELEFNRVAFWIHLF 133

Query: 123 DLLMVCMCRKWAIVLGNLLGKFEEVDWDIEDKRWENSLRIRVEVDISKPLKRGVVAKIGS 182
           DL M  + +  AI LGN +G F +VD + +   W  SLRIRV +DI+KPL+RG+   I  
Sbjct: 134 DLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDITKPLRRGIKINIDG 193

Query: 183 KAEDSWIKVTYERLPDYCYGCGRVGHVQNECE 215
                WI + YERLPD+CY CG +GH  ++C+
Sbjct: 194 PMGGCWIPIQYERLPDFCYFCGVIGHSSHDCD 225

BLAST of Lcy12g006270 vs. ExPASy TrEMBL
Match: A0A5C7IJL3 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_004194 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 1.4e-34
Identity = 73/209 (34.93%), Postives = 122/209 (58.37%), Query Frame = 0

Query: 7   NERKNILAIEDDELEEAADDLQGAILCKIHTPKMISPEIFKTFMPKIWNKEGKVRIKTVG 66
           +E + I  I +D  EE   D+   ++ K+ + K ++ E F + +  +WN  GKV I++VG
Sbjct: 95  DEDREIHQISEDVGEEGVQDVDHCLVGKVLSGKRVNREAFISVIEHLWNPFGKVEIESVG 154

Query: 67  RNIFKCIFNNNQEKERIVKGGPWSFDKAIVLTEEPTGDCRISNTQFKYAIFWIIFHDLLM 126
            N+F   F N +++ R+ + GPW FDK++++ E P G   I+  +F  A FW+  HD+ +
Sbjct: 155 ENVFMFHFQNPEDRSRVWQRGPWHFDKSLIVLEMPEGTGEIAKLRFNKADFWVQIHDIPI 214

Query: 127 VCMCRKWAIVLGNLLGKFEEVDWDIEDKRWENSLRIRVEVDISKPLKRGVVAKIGSKAED 186
           +CM R+ A  L   +G+  E+  +  D  W   LR++V +DIS+PLKR +   +      
Sbjct: 215 MCMNRRSAKWLAEQIGEVIEIPSESRD-CWGKFLRVKVRIDISRPLKRWLRLSLDKSGNV 274

Query: 187 SWIKVTYERLPDYCYGCGRVGHVQNECEE 216
             + + YER+P++C+ CGRVGH  NEC +
Sbjct: 275 VVVGLKYERMPEFCFACGRVGHGINECSD 302

BLAST of Lcy12g006270 vs. NCBI nr
Match: XP_022149484.1 (uncharacterized protein LOC111017902 [Momordica charantia])

HSP 1 Score: 161.8 bits (408), Expect = 6.9e-36
Identity = 71/211 (33.65%), Postives = 122/211 (57.82%), Query Frame = 0

Query: 5   TANERKNILAIEDDELEEAADDLQGAILCKIHTPKMISPEIFKTFMPKIWNKEGKVRIKT 64
           + N+    + I+  +    AD+++  ++ K+HT K IS E  ++ M  +W      R + 
Sbjct: 13  STNDENETVTIDRGKPILTADNVKLCVVAKLHTSKRISAEAIRSVMKSVWRVHNSTRFEP 72

Query: 65  VGRNIFKCIFNNNQEKERIVKGGPWSFDKAIVLTEEPTGDCRISNTQFKYAIFWIIFHDL 124
           +G NI+  +F +  EK R++  GPW+F+K++++   PT   +  +  F +  FWI  H++
Sbjct: 73  LGMNIYVILFKSLSEKSRVLSSGPWTFNKSLLVLTSPTATNQPLDMNFNFCAFWIQIHNI 132

Query: 125 LMVCMCRKWAIVLGNLLGKFEEVDWDIEDKRWENSLRIRVEVDISKPLKRGVVAKIGSKA 184
              C+  + A +LG  LG  EE++ D  D      +R+RV++D+SKPL+RG+  K  S  
Sbjct: 133 PFECISTEMANILGAKLGDVEEIEGDGADGWAGPFIRVRVKIDVSKPLRRGIKLK-NSDG 192

Query: 185 EDSWIKVTYERLPDYCYGCGRVGHVQNECEE 216
           +D W  + YE+LPD+CY CG++GH   ECE+
Sbjct: 193 KDIWCPLRYEKLPDFCYECGKIGHSGRECEQ 222

BLAST of Lcy12g006270 vs. NCBI nr
Match: TXG64850.1 (hypothetical protein EZV62_011844 [Acer yangbiense])

HSP 1 Score: 160.6 bits (405), Expect = 1.5e-35
Identity = 72/185 (38.92%), Postives = 115/185 (62.16%), Query Frame = 0

Query: 31  ILCKIHTPKMISPEIFKTFMPKIWNKEGKVRIKTVGRNIFKCIFNNNQEKERIVKGGPWS 90
           I+ K+ T +++  E+F   M KIW   G V I+ +  NIF   F N++++ R+++GGPWS
Sbjct: 41  IVGKVLTSRLVKKEVFIDVMSKIWRVSGGVDIEPIKGNIFAFYFTNDEDRMRVLRGGPWS 100

Query: 91  FDKAIVLTEEPTGDCRISNTQFKYAIFWIIFHDLLMVCMCRKWAIVLGNLLGKFEEVDWD 150
           FD+AI++ +EPTG   ISN +F Y  FW+  H+L ++CM  +  I LG+L+G+  + D  
Sbjct: 101 FDRAIIIFDEPTGTRDISNLRFNYVDFWVQIHNLPLLCMNEEIGITLGSLIGEVRDYDSG 160

Query: 151 IEDKRWENSLRIRVEVDISKPLKRGVVAKIGSKAEDSWIKVTYERLPDYCYGCGRVGHVQ 210
           I        +R+RV + + KPL+R +   +    + S + + YERL DYC+ CGR+GH+ 
Sbjct: 161 ITSDASGRYIRVRVTIPVDKPLQRSLRVDLLGDEKISTMLLRYERLLDYCFKCGRLGHLL 220

Query: 211 NECEE 216
           +EC E
Sbjct: 221 DECVE 225

BLAST of Lcy12g006270 vs. NCBI nr
Match: TXG72599.1 (hypothetical protein EZV62_001178 [Acer yangbiense])

HSP 1 Score: 157.5 bits (397), Expect = 1.3e-34
Identity = 74/210 (35.24%), Postives = 127/210 (60.48%), Query Frame = 0

Query: 6   ANERKNILAIEDDELEEAADDLQGAILCKIHTPKMISPEIFKTFMPKIWNKEGKVRIKTV 65
           A+E   +L + ++ + +  +D+   ++ K+ T K I+ E FK  + +IW+  G+V ++ V
Sbjct: 16  ADEDGAVLEMTEEVVVDGKEDIDQCLVGKVLTGKKINREAFKGLIEQIWSPYGQVEVELV 75

Query: 66  GRNIFKCIFNNNQEKERIVKGGPWSFDKAIVLTEEPTGDCRISNTQFKYAIFWIIFHDLL 125
           G N+F   F N  +++R+ + GPW F  +++  E+ +G   ++N +F  A FWI  HD+ 
Sbjct: 76  GDNVFMFYFINRADRDRVWRRGPWHFGNSLISLEKTSGLGNVANIEFNRADFWIQIHDIP 135

Query: 126 MVCMCRKWAIVLGNLLGKFEEVDWDIEDKR--WENSLRIRVEVDISKPLKRGVVAKIGSK 185
           ++CM R+ A  L   +G+  E+   + + R  W N LR++V +DISKPLKR +  K+G+ 
Sbjct: 136 ILCMNRRTARWLAEQIGEVVEI---LSESRECWGNFLRVKVRIDISKPLKRWLRLKLGAS 195

Query: 186 AEDSWIKVTYERLPDYCYGCGRVGHVQNEC 214
            E   + + YERLP++CY CGR+GH   EC
Sbjct: 196 KEIIVVGLKYERLPEFCYACGRIGHGIKEC 222

BLAST of Lcy12g006270 vs. NCBI nr
Match: XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia])

HSP 1 Score: 156.8 bits (395), Expect = 2.2e-34
Identity = 72/212 (33.96%), Postives = 123/212 (58.02%), Query Frame = 0

Query: 3   RITANERKNILAIEDDELEEAADDLQGAILCKIHTPKMISPEIFKTFMPKIWNKEGKVRI 62
           ++T+ E +  + ++ D ++ A   L  +++ K+   ++IS ++    +   W  E ++ +
Sbjct: 14  KLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRVLLLAWKVEHQLTV 73

Query: 63  KTVGRNIFKCIFNNNQEKERIVKGGPWSFDKAIVLTEEPTGDCRISNTQFKYAIFWIIFH 122
           +++G+N+F   F    +  R++K GPW FDKA+++ ++P     IS  +F    FWI   
Sbjct: 74  ESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISELEFNRVAFWIHLF 133

Query: 123 DLLMVCMCRKWAIVLGNLLGKFEEVDWDIEDKRWENSLRIRVEVDISKPLKRGVVAKIGS 182
           DL M  + +  AI LGN +G F +VD + +   W  SLRIRV +DI+KPL+RG+   I  
Sbjct: 134 DLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDITKPLRRGIKINIDG 193

Query: 183 KAEDSWIKVTYERLPDYCYGCGRVGHVQNECE 215
                WI + YERLPD+CY CG +GH  ++C+
Sbjct: 194 PMGGCWIPIQYERLPDFCYFCGVIGHSSHDCD 225

BLAST of Lcy12g006270 vs. NCBI nr
Match: TXG69259.1 (hypothetical protein EZV62_004194 [Acer yangbiense])

HSP 1 Score: 156.4 bits (394), Expect = 2.9e-34
Identity = 73/209 (34.93%), Postives = 122/209 (58.37%), Query Frame = 0

Query: 7   NERKNILAIEDDELEEAADDLQGAILCKIHTPKMISPEIFKTFMPKIWNKEGKVRIKTVG 66
           +E + I  I +D  EE   D+   ++ K+ + K ++ E F + +  +WN  GKV I++VG
Sbjct: 95  DEDREIHQISEDVGEEGVQDVDHCLVGKVLSGKRVNREAFISVIEHLWNPFGKVEIESVG 154

Query: 67  RNIFKCIFNNNQEKERIVKGGPWSFDKAIVLTEEPTGDCRISNTQFKYAIFWIIFHDLLM 126
            N+F   F N +++ R+ + GPW FDK++++ E P G   I+  +F  A FW+  HD+ +
Sbjct: 155 ENVFMFHFQNPEDRSRVWQRGPWHFDKSLIVLEMPEGTGEIAKLRFNKADFWVQIHDIPI 214

Query: 127 VCMCRKWAIVLGNLLGKFEEVDWDIEDKRWENSLRIRVEVDISKPLKRGVVAKIGSKAED 186
           +CM R+ A  L   +G+  E+  +  D  W   LR++V +DIS+PLKR +   +      
Sbjct: 215 MCMNRRSAKWLAEQIGEVIEIPSESRD-CWGKFLRVKVRIDISRPLKRWLRLSLDKSGNV 274

Query: 187 SWIKVTYERLPDYCYGCGRVGHVQNECEE 216
             + + YER+P++C+ CGRVGH  NEC +
Sbjct: 275 VVVGLKYERMPEFCFACGRVGHGINECSD 302

BLAST of Lcy12g006270 vs. TAIR 10
Match: AT3G42140.1 (zinc ion binding;nucleic acid binding )

HSP 1 Score: 42.7 bits (99), Expect = 4.3e-04
Identity = 38/163 (23.31%), Postives = 66/163 (40.49%), Query Frame = 0

Query: 51  PKIWNKEGKVRIKTVGRNIFKCIFNNNQEKERIVKGGPWSFDKAIVLTEEPTGDCRISNT 110
           PK  ++E   RI  + +  F  +F + +    I++ GPWSF+  + + +  T     S+ 
Sbjct: 45  PKNVDEEVVGRILEIHKIEF--LFQSEESMFSILRRGPWSFNDWMCVIQRWTK--LHSDA 104

Query: 111 QFKYAIFWIIFHDLLMVCMCRKWAIVLGNLLGKFEEVDWDIEDKRWENSLRIRVEVDISK 170
           +FK   FWI    + +  +  +    +G  +G F E +                      
Sbjct: 105 EFKRIPFWIQIRGIPLRFLTARIITSIGERMGLFLETN---------------------- 164

Query: 171 PLKRGVVAKIGSKAEDSWIKVTYERLPDYCYGCGRVGHVQNEC 214
            L R V          S +K  YE+L ++C  CG + H  +EC
Sbjct: 165 -LGRDV----------SVLKFQYEKLKNFCTTCGMLSHDASEC 170

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1D7653.3e-3633.65uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017... [more]
A0A5C7I6E57.4e-3638.92CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_01184... [more]
A0A5C7IU016.3e-3535.24CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_00117... [more]
A0A6J1DU551.1e-3433.96uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A5C7IJL31.4e-3434.93CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_00419... [more]
Match NameE-valueIdentityDescription
XP_022149484.16.9e-3633.65uncharacterized protein LOC111017902 [Momordica charantia][more]
TXG64850.11.5e-3538.92hypothetical protein EZV62_011844 [Acer yangbiense][more]
TXG72599.11.3e-3435.24hypothetical protein EZV62_001178 [Acer yangbiense][more]
XP_022156185.12.2e-3433.96uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncha... [more]
TXG69259.12.9e-3434.93hypothetical protein EZV62_004194 [Acer yangbiense][more]
Match NameE-valueIdentityDescription
AT3G42140.14.3e-0423.31zinc ion binding;nucleic acid binding [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025836Zinc knuckle CX2CX4HX4CPFAMPF14392zf-CCHC_4coord: 166..214
e-value: 6.0E-14
score: 51.5
IPR025558Domain of unknown function DUF4283PFAMPF14111DUF4283coord: 20..164
e-value: 8.8E-22
score: 77.2
IPR040256Uncharacterized protein At4g02000-likePANTHERPTHR31286GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKEcoord: 62..219
NoneNo IPR availablePANTHERPTHR31286:SF37SUBFAMILY NOT NAMEDcoord: 62..219
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 200..215
score: 9.850513
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 197..217

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy12g006270.1Lcy12g006270.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding