Homology
BLAST of Lcy12g005780 vs. ExPASy Swiss-Prot
Match:
Q9LIL5 (Putative pentatricopeptide repeat-containing protein At3g15200 OS=Arabidopsis thaliana OX=3702 GN=At3g15200 PE=3 SV=1)
HSP 1 Score: 537.3 bits (1383), Expect = 1.9e-151
Identity = 251/438 (57.31%), Postives = 338/438 (77.17%), Query Frame = 0
Query: 86 NVHRDDQSAVYVQNVLKFRRDKPVEEIERALNRCGLVLTDDFVLNVLRRHQSDWKPAFIF 145
N +D QSA+ V N++K R E+I+R L++CG+ LT++ VL V+ R++SDWKPA+I
Sbjct: 70 NDDKDKQSALDVHNIIKHHRGSSPEKIKRILDKCGIDLTEELVLEVVNRNRSDWKPAYIL 129
Query: 146 FNWVLKRGGEEVLYSPGSVIYNEILNILGKSRRFAEVDQVLVEMSKRKELVNEETYLVLL 205
V+K+ ++ S++YNEIL++LGK RRF E QV EMSKR VNE+TY VLL
Sbjct: 130 SQLVVKQS----VHLSSSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLL 189
Query: 206 NRYAAAHKVEEAIDIFYRRQEFGLEMNLIAFQSLLMWLCRYKHVEVAETLFHSKKHEFSI 265
NRYAAAHKV+EA+ +F RR+EFG++ +L+AF LLMWLCRYKHVE AETLF S++ EF
Sbjct: 190 NRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGC 249
Query: 266 DIKTNNIILNGWCVLGNVHEAKRFWREIVESKCEPDIYTYGILINSLTKKGKLGTALKLF 325
DIK N+ILNGWCVLGNVHEAKRFW++I+ SKC PD+ +YG +IN+LTKKGKLG A++L+
Sbjct: 250 DIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELY 309
Query: 326 RAMWERGLKPDVVICNCIIDALCFKKRIPEALDVFKDMNKRGCASNIATYNTLIKHLCKI 385
RAMW+ PDV ICN +IDALCFKKRIPEAL+VF++++++G N+ TYN+L+KHLCKI
Sbjct: 310 RAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKI 369
Query: 386 RRMEKVNELLDEMEEGKGSCWPNSVTFSYLLGSVRKPEEVPVLLQRMERSGCKMTSDTYN 445
RR EKV EL++EME GSC PN VTFSYLL ++ ++V ++L+RM ++ C+MTSD YN
Sbjct: 370 RRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYN 429
Query: 446 LILRLYMDWDIQERVKSTWNEMEKMGLGPDRRSYTVMIHWLYEKGRIDDGLRYFREMTLK 505
L+ RLY+ WD +E+V+ W+EME+ GLGPD+R+YT+ IH L+ KG+I + L YF+EM K
Sbjct: 430 LMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSK 489
Query: 506 GMMLEPKTKKLVNAMNVK 524
GM+ EP+T+ L+N K
Sbjct: 490 GMVPEPRTEMLLNQNKTK 503
BLAST of Lcy12g005780 vs. ExPASy Swiss-Prot
Match:
Q9LFQ4 (Pentatricopeptide repeat-containing protein At5g15010, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g15010 PE=2 SV=2)
HSP 1 Score: 270.0 bits (689), Expect = 5.7e-71
Identity = 159/466 (34.12%), Postives = 255/466 (54.72%), Query Frame = 0
Query: 72 TLVSNSVVVSDESINVHRDDQSAV-------------YVQNVLKFRRD--KPVEEIERAL 131
T +++S V N+ +DD+S + V + K +D +E+ L
Sbjct: 59 TSIADSEQVGFTRSNIEKDDESDIDLGCSISDELVSEDVGKISKLVKDCGSDRKELRNKL 118
Query: 132 NRCGLVLTDDFVLNVLRRHQSDWKPAFIFFNWVLKRGGEEVLYSPGSVIYNEILNILGKS 191
C + +++ V+ +L R ++DW+ AF FF W K+ G Y Y+ +++ILGK
Sbjct: 119 EECDVKPSNELVVEILSRVRNDWETAFTFFVWAGKQQG----YVRSVREYHSMISILGKM 178
Query: 192 RRFAEVDQVLVEMSK-RKELVNEETYLVLLNRYAAAHKVEEAIDIFYRRQEFGLEMNLIA 251
R+F ++ EM K LVN +T L+++ +Y A H V +AI+ F+ + F LEM +
Sbjct: 179 RKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDD 238
Query: 252 FQSLLMWLCRYKHVEVAETLFHSKKHEFSIDIKTNNIILNGWC-VLGNVHEAKRFWREIV 311
FQSLL LCRYK+V A L K ++ D K+ NI+LNGWC V+G+ EA+R W E+
Sbjct: 239 FQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMG 298
Query: 312 ESKCEPDIYTYGILINSLTKKGKLGTALKLFRAMWERGLKPDVVICNCIIDALCFKKRIP 371
+ D+ +Y +I+ +K G L LKLF M + ++PD + N ++ AL +
Sbjct: 299 NVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVS 358
Query: 372 EALDVFKDM-NKRGCASNIATYNTLIKHLCKIRRMEKVNELLDEMEEGKGSCWPNSVTFS 431
EA ++ K M ++G N+ TYN+LIK LCK R+ E+ ++ DEM E KG +P T+
Sbjct: 359 EARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLE-KG-LFPTIRTYH 418
Query: 432 YLLGSVRKPEEVPVLLQRMERSGCKMTSDTYNLILRLYMDWDIQERVKSTWNEMEKMGLG 491
+ +R EEV LL +M + GC+ T +TY +++R W + V W+EM++ +G
Sbjct: 419 AFMRILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVG 478
Query: 492 PDRRSYTVMIHWLYEKGRIDDGLRYFREMTLKGMMLEPKTKKLVNA 520
PD SY VMIH L+ G+I++ Y++EM KGM + ++ +
Sbjct: 479 PDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMIQS 518
BLAST of Lcy12g005780 vs. ExPASy Swiss-Prot
Match:
Q9M8M3 (Pentatricopeptide repeat-containing protein At1g80550, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g80550 PE=1 SV=1)
HSP 1 Score: 229.2 bits (583), Expect = 1.1e-58
Identity = 130/386 (33.68%), Postives = 209/386 (54.15%), Query Frame = 0
Query: 128 VLNVLRRHQSDWKPAFIFFNWVLKRGGEEVLYSPGSVIYNEILNILGKSRRFAEVDQVLV 187
V L + +DW+ A FFNWV + G + + +N +++ILGK F E+ L+
Sbjct: 50 VCEALTCYSNDWQKALEFFNWVERESG----FRHTTETFNRVIDILGKYFEF-EISWALI 109
Query: 188 E--MSKRKELVNEETYLVLLNRYAAAHKVEEAIDIFYRRQEFGLEMNLIAFQSLLMWLCR 247
+ + + N T+ ++ RY AH V+EAID + + +F L + +F +L+ LC
Sbjct: 110 NRMIGNTESVPNHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLR-DETSFYNLVDALCE 169
Query: 248 YKHVEVAETLFHSKK---HEFSI-DIKTNNIILNGWCVLGNVHEAKRFWREIVESKCEPD 307
+KHV AE L K + FS+ + K +N+IL GW LG + K +W+++ D
Sbjct: 170 HKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKD 229
Query: 308 IYTYGILINSLTKKGKLGTALKLFRAMWERGLKPDVVICNCIIDALCFKKRIPEALDVFK 367
+++Y I ++ + K GK A+KL++ M R +K DVV N +I A+ + + + VF+
Sbjct: 230 LFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFR 289
Query: 368 DMNKRGCASNIATYNTLIKHLCKIRRMEKVNELLDEMEEGKGSCWPNSVTFSYLLGSVRK 427
+M +RGC N+AT+NT+IK LC+ RM +LDEM K C P+S+T+ L + K
Sbjct: 290 EMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMP--KRGCQPDSITYMCLFSRLEK 349
Query: 428 PEEVPVLLQRMERSGCKMTSDTYNLILRLYMDWDIQERVKSTWNEMEKMGLGPDRRSYTV 487
P E+ L RM RSG + DTY +++R + W + V W M++ G PD +Y
Sbjct: 350 PSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNA 409
Query: 488 MIHWLYEKGRIDDGLRYFREMTLKGM 508
+I L +KG +D Y EM +G+
Sbjct: 410 VIDALIQKGMLDMAREYEEEMIERGL 427
BLAST of Lcy12g005780 vs. ExPASy Swiss-Prot
Match:
P0C8A0 (Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana OX=3702 GN=At3g49730 PE=2 SV=1)
HSP 1 Score: 211.1 bits (536), Expect = 3.1e-53
Identity = 138/467 (29.55%), Postives = 234/467 (50.11%), Query Frame = 0
Query: 69 HEITLVSNSVVVSDESIN-------VHRDDQSAVYVQNVLKFRRD--KPVEEIERALNRC 128
H +++N V S E N +D+ A V+ + + R+ V ++E ALN
Sbjct: 32 HISRVLNNDFVESTERKNGVGLVCPEKHEDEFAGEVEKIYRILRNHHSRVPKLELALNES 91
Query: 129 GLVLTDDFVLNVLRRHQSDWKPAFIFFNWVLKRGGEEVLYSPGSVIYNEILNILGKSRRF 188
G+ L ++ VL R + FF W K+ G Y + ++ IL K R+F
Sbjct: 92 GIDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQPG----YFHSYEVCKSMVMILSKMRQF 151
Query: 189 AEVDQVLVEMSK-RKELVNEETYLVLLNRYAAAHKVEEAIDIFYRRQEFGLEMNLIAFQS 248
V ++ EM K EL+ E ++VL+ R+A+A+ V++A+++ ++GLE + F
Sbjct: 152 GAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGC 211
Query: 249 LLMWLCRYKHVEVAETLFHSKKHEFSIDIKTNNIILNGWCVLGNVHEAKRFWREIVESKC 308
LL LC+ V+ A +F + +F +++ +L GWC G + EAK ++ E+
Sbjct: 212 LLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGL 271
Query: 309 EPDIYTYGILINSLTKKGKLGTALKLFRAMWERGLKPDVVICNCIIDALC-FKKRIPEAL 368
EPDI + L++ GK+ A L M +RG +P+V +I ALC +KR+ EA+
Sbjct: 272 EPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAM 331
Query: 369 DVFKDMNKRGCASNIATYNTLIKHLCKIRRMEKVNELLDEMEEGKGSCWPNSVTFSYLLG 428
VF +M + GC ++I TY LI CK ++K +LD+M K P+ VT+ ++
Sbjct: 332 RVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMR--KKGVMPSQVTYMQIMV 391
Query: 429 SVRKP---EEVPVLLQRMERSGCKMTSDTYNLILRLYMDWDIQERVKSTWNEMEKMGLGP 488
+ K EE L+++M+R GC YN+++RL + WNEME GL P
Sbjct: 392 AHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSP 451
Query: 489 DRRSYTVMIHWLYEKGRIDDGLRYFREMTLKGMMLEPKTKKLVNAMN 522
++ +MI+ +G + + +F+EM +G+ P+ L + +N
Sbjct: 452 GVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLN 492
BLAST of Lcy12g005780 vs. ExPASy Swiss-Prot
Match:
Q9LZP3 (Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g62470 PE=2 SV=1)
HSP 1 Score: 207.6 bits (527), Expect = 3.4e-52
Identity = 125/399 (31.33%), Postives = 211/399 (52.88%), Query Frame = 0
Query: 112 IERALNRCGLVLTDDFVLNVLRRHQSDWKPAFIFFNWVLKRGGEEVLYSPGSVIYNEILN 171
+E L+ L L+ D ++ VL R + KPAF FF W +R G ++ S YN +++
Sbjct: 148 MEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQG----FAHDSRTYNSMMS 207
Query: 172 ILGKSRRFAEVDQVLVEMSKRKELVNEETYLVLLNRYAAAHKVEEAIDIFYRRQEFGLEM 231
IL K+R+F + VL EM K L+ ET+ + + +AAA + ++A+ IF +++ ++
Sbjct: 208 ILAKTRQFETMVSVLEEMG-TKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKI 267
Query: 232 NLIAFQSLLMWLCRYKHVEVAETLFHSKKHEFSIDIKTNNIILNGWCVLGNVHEAKRFWR 291
+ LL L R K + A+ LF K F+ ++ T ++LNGWC + N+ EA R W
Sbjct: 268 GVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWN 327
Query: 292 EIVESKCEPDIYTYGILINSLTKKGKLGTALKLFRAMWERGLKPDVVICNCIIDALCFKK 351
++++ +PDI + +++ L + K A+KLF M +G P+V +I C +
Sbjct: 328 DMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQS 387
Query: 352 RIPEALDVFKDMNKRGCASNIATYNTLIKHLCKIRRMEKVNELLDEMEEGKGSCWPNSVT 411
+ A++ F DM G + A Y LI ++++ V ELL EM+E KG P+ T
Sbjct: 388 SMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQE-KGHP-PDGKT 447
Query: 412 FS---YLLGSVRKPEEVPVLLQRMERSGCKMTSDTYNLILRLYMDWDIQERVKSTWNEME 471
++ L+ + + PE + +M ++ + + T+N+I++ Y E ++ W EM
Sbjct: 448 YNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMI 507
Query: 472 KMGLGPDRRSYTVMIHWLYEKGRIDDGLRYFREMTLKGM 508
K G+ PD SYTV+I L +G+ + RY EM KGM
Sbjct: 508 KKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGM 539
BLAST of Lcy12g005780 vs. ExPASy TrEMBL
Match:
A0A1S3BIS0 (putative pentatricopeptide repeat-containing protein At3g15200 OS=Cucumis melo OX=3656 GN=LOC103490151 PE=4 SV=1)
HSP 1 Score: 896.3 bits (2315), Expect = 5.9e-257
Identity = 435/523 (83.17%), Postives = 467/523 (89.29%), Query Frame = 0
Query: 1 MRFKFLWLRNITTEDFHGKFKLGFQSYMIKGLLPCAPTTQRPIFAISDHIHHIKIYEDQN 60
M+FK WLRNIT EDFHGKFKLGFQS ++KG LP PT+ RP +SD IHHI E N
Sbjct: 1 MKFKVSWLRNITAEDFHGKFKLGFQSNLVKGFLPHTPTSHRPFSVVSDRIHHILSCE--N 60
Query: 61 LTSRSRNCHEITLVSNSVVVSDESINVHRDDQSAVYVQNVLKFRRDKPVEEIERALNRCG 120
LT R RNCHE TLVSNS+ SDE I VHRDD SAVYVQNVL FRR KPVEEI+RAL+ C
Sbjct: 61 LTPRPRNCHERTLVSNSIADSDEPITVHRDDPSAVYVQNVLYFRRHKPVEEIDRALSLCD 120
Query: 121 LVLTDDFVLNVLRRHQSDWKPAFIFFNWVLKRGGEEVLYSPGSVIYNEILNILGKSRRFA 180
LVLT+DFVL VLRRH+SDWKPAFIFFNWV K+G E ++PGSVIYNEIL+ILGKS RF
Sbjct: 121 LVLTEDFVLKVLRRHRSDWKPAFIFFNWVTKKGTNEDKFTPGSVIYNEILDILGKSHRFE 180
Query: 181 EVDQVLVEMSKRKELVNEETYLVLLNRYAAAHKVEEAIDIFYRRQEFGLEMNLIAFQSLL 240
EVD+V VEMSKRKELVNEETY VLLNRYAAAHKVEEAI IFYRRQEFGLEMNLIAFQSLL
Sbjct: 181 EVDKVFVEMSKRKELVNEETYSVLLNRYAAAHKVEEAISIFYRRQEFGLEMNLIAFQSLL 240
Query: 241 MWLCRYKHVEVAETLFHSKKHEFSIDIKTNNIILNGWCVLGNVHEAKRFWREIVESKCEP 300
MWLCRYKHVE AETLFHSKKHEF IDIKT+NIILNGWCVLGNVHEAKRFWREI+ESKCEP
Sbjct: 241 MWLCRYKHVEAAETLFHSKKHEFVIDIKTSNIILNGWCVLGNVHEAKRFWREIIESKCEP 300
Query: 301 DIYTYGILINSLTKKGKLGTALKLFRAMWERGLKPDVVICNCIIDALCFKKRIPEALDVF 360
DIYTYG LINSLTKKGKLGTALKLFRAMWERGLK DVVICNCIIDALCFKKRIPEAL++F
Sbjct: 301 DIYTYGTLINSLTKKGKLGTALKLFRAMWERGLKTDVVICNCIIDALCFKKRIPEALEIF 360
Query: 361 KDMNKRGCASNIATYNTLIKHLCKIRRMEKVNELLDEMEEGKGSCWPNSVTFSYLLGSVR 420
K+MN+RGCA+N+ATYNTLIKHLCKIRRMEKVNELL+EMEE KGSCWPNSVTFSYLL S+R
Sbjct: 361 KEMNERGCAANVATYNTLIKHLCKIRRMEKVNELLNEMEERKGSCWPNSVTFSYLLRSIR 420
Query: 421 KPEEVPVLLQRMERSGCKMTSDTYNLILRLYMDWDIQERVKSTWNEMEKMGLGPDRRSYT 480
PEEVPVLLQRME SGCKMTSD YNLILRLYMDW+IQERVKSTWNEM++MGLGPDRRSYT
Sbjct: 421 GPEEVPVLLQRMETSGCKMTSDIYNLILRLYMDWNIQERVKSTWNEMKEMGLGPDRRSYT 480
Query: 481 VMIHWLYEKGRIDDGLRYFREMTLKGMMLEPKTKKLVNAMNVK 524
+MIH LYEKGR DGLRYF EMTL+G+M E KT+KLVNA NVK
Sbjct: 481 IMIHGLYEKGRTKDGLRYFNEMTLRGIMPESKTEKLVNATNVK 521
BLAST of Lcy12g005780 vs. ExPASy TrEMBL
Match:
A0A5D3DHN3 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G001340 PE=4 SV=1)
HSP 1 Score: 894.0 bits (2309), Expect = 3.0e-256
Identity = 434/523 (82.98%), Postives = 466/523 (89.10%), Query Frame = 0
Query: 1 MRFKFLWLRNITTEDFHGKFKLGFQSYMIKGLLPCAPTTQRPIFAISDHIHHIKIYEDQN 60
M+FK WLRNIT EDFHGKFKLGFQS ++KG LP PT+ RP +SD IHHI E N
Sbjct: 1 MKFKVPWLRNITAEDFHGKFKLGFQSNLVKGFLPHTPTSHRPFSVVSDRIHHILSCE--N 60
Query: 61 LTSRSRNCHEITLVSNSVVVSDESINVHRDDQSAVYVQNVLKFRRDKPVEEIERALNRCG 120
LT R RNCHE TL SNS+ SDE I VHRDD SAVYVQNVL FRR KPVEEI+RAL+ C
Sbjct: 61 LTPRPRNCHERTLFSNSIADSDEPITVHRDDPSAVYVQNVLYFRRHKPVEEIDRALSLCD 120
Query: 121 LVLTDDFVLNVLRRHQSDWKPAFIFFNWVLKRGGEEVLYSPGSVIYNEILNILGKSRRFA 180
LVLT+DFVL VLRRH+SDWKPAFIFFNWV K+G E ++PGSVIYNEIL+ILGKS RF
Sbjct: 121 LVLTEDFVLKVLRRHRSDWKPAFIFFNWVTKKGTNEDKFTPGSVIYNEILDILGKSHRFE 180
Query: 181 EVDQVLVEMSKRKELVNEETYLVLLNRYAAAHKVEEAIDIFYRRQEFGLEMNLIAFQSLL 240
EVD+V VEMSKRKELVNEETY VLLNRYAAAHKVEEAI IFYRRQEFGLEMNLIAFQSLL
Sbjct: 181 EVDKVFVEMSKRKELVNEETYSVLLNRYAAAHKVEEAISIFYRRQEFGLEMNLIAFQSLL 240
Query: 241 MWLCRYKHVEVAETLFHSKKHEFSIDIKTNNIILNGWCVLGNVHEAKRFWREIVESKCEP 300
MWLCRYKHVE AETLFHSKKHEF IDIKT+NIILNGWCVLGNVHEAKRFWREI+ESKCEP
Sbjct: 241 MWLCRYKHVEAAETLFHSKKHEFVIDIKTSNIILNGWCVLGNVHEAKRFWREIIESKCEP 300
Query: 301 DIYTYGILINSLTKKGKLGTALKLFRAMWERGLKPDVVICNCIIDALCFKKRIPEALDVF 360
DIYTYG LINSLTKKGKLGTALKLFRAMWERGLK DVVICNCIIDALCFKKRIPEAL++F
Sbjct: 301 DIYTYGTLINSLTKKGKLGTALKLFRAMWERGLKTDVVICNCIIDALCFKKRIPEALEIF 360
Query: 361 KDMNKRGCASNIATYNTLIKHLCKIRRMEKVNELLDEMEEGKGSCWPNSVTFSYLLGSVR 420
K+MN+RGCA+N+ATYNTLIKHLCKIRRMEKVNELL+EMEE KGSCWPNSVTFSYLL S+R
Sbjct: 361 KEMNERGCAANVATYNTLIKHLCKIRRMEKVNELLNEMEERKGSCWPNSVTFSYLLRSIR 420
Query: 421 KPEEVPVLLQRMERSGCKMTSDTYNLILRLYMDWDIQERVKSTWNEMEKMGLGPDRRSYT 480
PEEVPVLLQRME SGCKMTSD YNLILRLYMDW+IQERVKSTWNEM++MGLGPDRRSYT
Sbjct: 421 GPEEVPVLLQRMETSGCKMTSDIYNLILRLYMDWNIQERVKSTWNEMKEMGLGPDRRSYT 480
Query: 481 VMIHWLYEKGRIDDGLRYFREMTLKGMMLEPKTKKLVNAMNVK 524
+MIH LYEKGR DGLRYF EMTL+G+M E KT+KLVNA NVK
Sbjct: 481 IMIHGLYEKGRTKDGLRYFNEMTLRGIMPESKTEKLVNATNVK 521
BLAST of Lcy12g005780 vs. ExPASy TrEMBL
Match:
A0A6J1ICV5 (putative pentatricopeptide repeat-containing protein At3g15200 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111471390 PE=4 SV=1)
HSP 1 Score: 893.3 bits (2307), Expect = 5.0e-256
Identity = 430/528 (81.44%), Postives = 475/528 (89.96%), Query Frame = 0
Query: 1 MRFKFLWLRNITTEDFHGKFKLGFQSYMIKGLLPCAPTTQRPIFAISDHIHHIKIYEDQN 60
MRFKFLWLRN E+FHGKF+LGFQ+Y+IKG+LP P + RP F ISDHIHH + YE
Sbjct: 1 MRFKFLWLRNNAAENFHGKFRLGFQAYLIKGVLPHTPISYRPFFGISDHIHHTQTYE--- 60
Query: 61 LTSRSRNCHEITLVSNSVVVSDESINVHRDDQSAVYVQNVLKFRRDKPVEEIERALNRCG 120
+RNCHE T +SN V VSD+S NV+ DQSAVYVQNVLKFRR KPVEEIE ALNRC
Sbjct: 61 ---TTRNCHETTKLSNPVAVSDDSFNVY--DQSAVYVQNVLKFRRHKPVEEIETALNRCS 120
Query: 121 LVLTDDFVLNVLRRHQSDWKPAFIFFNWVLKRGGEEVLYSPGSVIYNEILNILGKSRRFA 180
LVLTDDFVL VLRRH+SDWKPAF FFNWV KRG E YSPGSVIYNEIL+ILGKSRRF
Sbjct: 121 LVLTDDFVLQVLRRHRSDWKPAFDFFNWVTKRGNGEGEYSPGSVIYNEILDILGKSRRFE 180
Query: 181 EVDQVLVEMSKRKELVNEETYLVLLNRYAAAHKVEEAIDIFYRRQEFGLEMNLIAFQSLL 240
EVD+V VEMSKRK+LVNEETYLVLLNRYAAAHKVEEAIDIF+RRQ+ GLEMNLIAFQSLL
Sbjct: 181 EVDKVFVEMSKRKKLVNEETYLVLLNRYAAAHKVEEAIDIFHRRQQLGLEMNLIAFQSLL 240
Query: 241 MWLCRYKHVEVAETLFHSKKHEFSIDIKTNNIILNGWCVLGNVHEAKRFWREIVESKCEP 300
MWLCRYKHVE+AETLFHSKKHEF DIKT+NI+LNGWCVLGNVHEAKRFWREI+ESK EP
Sbjct: 241 MWLCRYKHVEIAETLFHSKKHEFFPDIKTSNIVLNGWCVLGNVHEAKRFWREIIESKWEP 300
Query: 301 DIYTYGILINSLTKKGKLGTALKLFRAMWERGLKPDVVICNCIIDALCFKKRIPEALDVF 360
DIYTYG LINSLTKKGKLGTAL L+RAMWE+GLKPDVVICNCIIDALCFKKRIPEAL++F
Sbjct: 301 DIYTYGTLINSLTKKGKLGTALNLYRAMWEKGLKPDVVICNCIIDALCFKKRIPEALEIF 360
Query: 361 KDMNKRGCASNIATYNTLIKHLCKIRRMEKVNELLDEMEEGKGSCWPNSVTFSYLLGSVR 420
K+MN+RGCASN+ATYNTLIKHLCKIRRMEKVNELLDEM E SCWPNSVTFSYLL SVR
Sbjct: 361 KEMNERGCASNVATYNTLIKHLCKIRRMEKVNELLDEMVERNRSCWPNSVTFSYLLASVR 420
Query: 421 KPEEVPVLLQRMERSGCKMTSDTYNLILRLYMDWDIQERVKSTWNEMEKMGLGPDRRSYT 480
+PEE+P L++RMERSGCKM+SDTYNLILRLYM+WDI+ERVK TWNEME++GLGPDRRSYT
Sbjct: 421 EPEEIPKLVERMERSGCKMSSDTYNLILRLYMEWDIEERVKCTWNEMEEIGLGPDRRSYT 480
Query: 481 VMIHWLYEKGRIDDGLRYFREMTLKGMMLEPKTKKLVNAMNVKLQERR 529
+MIH LYEKGR ++GLRY+REMTLKGMM+E KT++LVNAMNVKLQ+RR
Sbjct: 481 IMIHGLYEKGRKEEGLRYYREMTLKGMMVEAKTERLVNAMNVKLQKRR 520
BLAST of Lcy12g005780 vs. ExPASy TrEMBL
Match:
A0A6J1I9V6 (putative pentatricopeptide repeat-containing protein At3g15200 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471390 PE=4 SV=1)
HSP 1 Score: 893.3 bits (2307), Expect = 5.0e-256
Identity = 430/528 (81.44%), Postives = 475/528 (89.96%), Query Frame = 0
Query: 1 MRFKFLWLRNITTEDFHGKFKLGFQSYMIKGLLPCAPTTQRPIFAISDHIHHIKIYEDQN 60
MRFKFLWLRN E+FHGKF+LGFQ+Y+IKG+LP P + RP F ISDHIHH + YE
Sbjct: 1 MRFKFLWLRNNAAENFHGKFRLGFQAYLIKGVLPHTPISYRPFFGISDHIHHTQTYE--- 60
Query: 61 LTSRSRNCHEITLVSNSVVVSDESINVHRDDQSAVYVQNVLKFRRDKPVEEIERALNRCG 120
+RNCHE T +SN V VSD+S NV+ DQSAVYVQNVLKFRR KPVEEIE ALNRC
Sbjct: 61 ---TTRNCHETTKLSNPVAVSDDSFNVY--DQSAVYVQNVLKFRRHKPVEEIETALNRCS 120
Query: 121 LVLTDDFVLNVLRRHQSDWKPAFIFFNWVLKRGGEEVLYSPGSVIYNEILNILGKSRRFA 180
LVLTDDFVL VLRRH+SDWKPAF FFNWV KRG E YSPGSVIYNEIL+ILGKSRRF
Sbjct: 121 LVLTDDFVLQVLRRHRSDWKPAFDFFNWVTKRGNGEGEYSPGSVIYNEILDILGKSRRFE 180
Query: 181 EVDQVLVEMSKRKELVNEETYLVLLNRYAAAHKVEEAIDIFYRRQEFGLEMNLIAFQSLL 240
EVD+V VEMSKRK+LVNEETYLVLLNRYAAAHKVEEAIDIF+RRQ+ GLEMNLIAFQSLL
Sbjct: 181 EVDKVFVEMSKRKKLVNEETYLVLLNRYAAAHKVEEAIDIFHRRQQLGLEMNLIAFQSLL 240
Query: 241 MWLCRYKHVEVAETLFHSKKHEFSIDIKTNNIILNGWCVLGNVHEAKRFWREIVESKCEP 300
MWLCRYKHVE+AETLFHSKKHEF DIKT+NI+LNGWCVLGNVHEAKRFWREI+ESK EP
Sbjct: 241 MWLCRYKHVEIAETLFHSKKHEFFPDIKTSNIVLNGWCVLGNVHEAKRFWREIIESKWEP 300
Query: 301 DIYTYGILINSLTKKGKLGTALKLFRAMWERGLKPDVVICNCIIDALCFKKRIPEALDVF 360
DIYTYG LINSLTKKGKLGTAL L+RAMWE+GLKPDVVICNCIIDALCFKKRIPEAL++F
Sbjct: 301 DIYTYGTLINSLTKKGKLGTALNLYRAMWEKGLKPDVVICNCIIDALCFKKRIPEALEIF 360
Query: 361 KDMNKRGCASNIATYNTLIKHLCKIRRMEKVNELLDEMEEGKGSCWPNSVTFSYLLGSVR 420
K+MN+RGCASN+ATYNTLIKHLCKIRRMEKVNELLDEM E SCWPNSVTFSYLL SVR
Sbjct: 361 KEMNERGCASNVATYNTLIKHLCKIRRMEKVNELLDEMVERNRSCWPNSVTFSYLLASVR 420
Query: 421 KPEEVPVLLQRMERSGCKMTSDTYNLILRLYMDWDIQERVKSTWNEMEKMGLGPDRRSYT 480
+PEE+P L++RMERSGCKM+SDTYNLILRLYM+WDI+ERVK TWNEME++GLGPDRRSYT
Sbjct: 421 EPEEIPKLVERMERSGCKMSSDTYNLILRLYMEWDIEERVKCTWNEMEEIGLGPDRRSYT 480
Query: 481 VMIHWLYEKGRIDDGLRYFREMTLKGMMLEPKTKKLVNAMNVKLQERR 529
+MIH LYEKGR ++GLRY+REMTLKGMM+E KT++LVNAMNVKLQ+RR
Sbjct: 481 IMIHGLYEKGRKEEGLRYYREMTLKGMMVEAKTERLVNAMNVKLQKRR 520
BLAST of Lcy12g005780 vs. ExPASy TrEMBL
Match:
A0A6J1EW48 (putative pentatricopeptide repeat-containing protein At3g15200 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111438430 PE=4 SV=1)
HSP 1 Score: 889.8 bits (2298), Expect = 5.6e-255
Identity = 433/528 (82.01%), Postives = 471/528 (89.20%), Query Frame = 0
Query: 1 MRFKFLWLRNITTEDFHGKFKLGFQSYMIKGLLPCAPTTQRPIFAISDHIHHIKIYEDQN 60
MRFKFLWLRN ED H KFKLGFQ+Y+IKG+LP P + RP F SDHIH + Y
Sbjct: 15 MRFKFLWLRNNAAEDIHAKFKLGFQAYLIKGVLPHTPISYRPFFGFSDHIHPTQTY---- 74
Query: 61 LTSRSRNCHEITLVSNSVVVSDESINVHRDDQSAVYVQNVLKFRRDKPVEEIERALNRCG 120
+ NCHE T VSN V VSD+SINV+ QSAVYVQNVLKFRR KPVEEIE ALNRC
Sbjct: 75 --GTTTNCHETTKVSNPVAVSDDSINVY--GQSAVYVQNVLKFRRHKPVEEIETALNRCS 134
Query: 121 LVLTDDFVLNVLRRHQSDWKPAFIFFNWVLKRGGEEVLYSPGSVIYNEILNILGKSRRFA 180
LVLTDDFVL VLRRH+SDWKPAF FFNWV KRG E YSPGSVIYNEIL+ILGKSRRF
Sbjct: 135 LVLTDDFVLQVLRRHRSDWKPAFDFFNWVTKRGNGEGEYSPGSVIYNEILDILGKSRRFD 194
Query: 181 EVDQVLVEMSKRKELVNEETYLVLLNRYAAAHKVEEAIDIFYRRQEFGLEMNLIAFQSLL 240
EVD+V VEMSKRK+LVNEETYLVLLNRYAAAHKVEEAIDIF+RRQE GLEMNLIAFQSLL
Sbjct: 195 EVDKVFVEMSKRKKLVNEETYLVLLNRYAAAHKVEEAIDIFHRRQELGLEMNLIAFQSLL 254
Query: 241 MWLCRYKHVEVAETLFHSKKHEFSIDIKTNNIILNGWCVLGNVHEAKRFWREIVESKCEP 300
MWLCRYKHVEVAETLFHSKKHEF DIKT+NI+LNGWCVLGNVHEAKRFWREI+ESK EP
Sbjct: 255 MWLCRYKHVEVAETLFHSKKHEFFPDIKTSNIVLNGWCVLGNVHEAKRFWREIIESKWEP 314
Query: 301 DIYTYGILINSLTKKGKLGTALKLFRAMWERGLKPDVVICNCIIDALCFKKRIPEALDVF 360
DIYTYG LINSLTKKGKLGTALKL+RAMWE+GLKPDVVICNCIIDALCFKKRI EAL++F
Sbjct: 315 DIYTYGTLINSLTKKGKLGTALKLYRAMWEKGLKPDVVICNCIIDALCFKKRIAEALEIF 374
Query: 361 KDMNKRGCASNIATYNTLIKHLCKIRRMEKVNELLDEMEEGKGSCWPNSVTFSYLLGSVR 420
K+MN+RGCASN+ATYNTLIKHLCKIRRMEKVNELLDEMEE SCWPNSVTFSYLL SVR
Sbjct: 375 KEMNERGCASNVATYNTLIKHLCKIRRMEKVNELLDEMEERNRSCWPNSVTFSYLLASVR 434
Query: 421 KPEEVPVLLQRMERSGCKMTSDTYNLILRLYMDWDIQERVKSTWNEMEKMGLGPDRRSYT 480
+PEEVP+L++RMERSGCKM+SDTYNLILRLYM+WDI+ERVK TWNEME+MGLGPDRRSYT
Sbjct: 435 EPEEVPILVERMERSGCKMSSDTYNLILRLYMEWDIEERVKCTWNEMEEMGLGPDRRSYT 494
Query: 481 VMIHWLYEKGRIDDGLRYFREMTLKGMMLEPKTKKLVNAMNVKLQERR 529
+MIH LYEKGR ++GLRY+REMTLKGMM+E KT+KLVNAMNVKLQ+RR
Sbjct: 495 IMIHGLYEKGRKEEGLRYYREMTLKGMMVEAKTEKLVNAMNVKLQKRR 534
BLAST of Lcy12g005780 vs. NCBI nr
Match:
XP_038899171.1 (putative pentatricopeptide repeat-containing protein At3g15200 [Benincasa hispida] >XP_038899172.1 putative pentatricopeptide repeat-containing protein At3g15200 [Benincasa hispida] >XP_038899173.1 putative pentatricopeptide repeat-containing protein At3g15200 [Benincasa hispida] >XP_038899174.1 putative pentatricopeptide repeat-containing protein At3g15200 [Benincasa hispida] >XP_038899176.1 putative pentatricopeptide repeat-containing protein At3g15200 [Benincasa hispida] >XP_038899177.1 putative pentatricopeptide repeat-containing protein At3g15200 [Benincasa hispida] >XP_038899178.1 putative pentatricopeptide repeat-containing protein At3g15200 [Benincasa hispida] >XP_038899179.1 putative pentatricopeptide repeat-containing protein At3g15200 [Benincasa hispida] >XP_038899180.1 putative pentatricopeptide repeat-containing protein At3g15200 [Benincasa hispida] >XP_038899181.1 putative pentatricopeptide repeat-containing protein At3g15200 [Benincasa hispida])
HSP 1 Score: 935.6 bits (2417), Expect = 1.8e-268
Identity = 454/530 (85.66%), Postives = 485/530 (91.51%), Query Frame = 0
Query: 1 MRFKFLWLRNITTEDFHGKFKLGFQSYMIKGLLPCAPTTQRPIFAISDHIHHIKIYEDQN 60
MRF+ WLRNIT EDFHGKFKLGFQS ++KG LP PT+ RP F + D IHHI + Q+
Sbjct: 1 MRFESPWLRNITAEDFHGKFKLGFQSNLLKGFLPHIPTSHRPFFVVYDRIHHILSCKHQS 60
Query: 61 LTSRSRNCHEITLVSNSVVVSDESINVHRDDQSAVYVQNVLKFRRDKPVEEIERALNRCG 120
LT R RNCHE TLVSNSV VSDESI VHRDDQSAV+V+NV+KFRRDKPVEEIE ALNRC
Sbjct: 61 LTPRPRNCHERTLVSNSVAVSDESITVHRDDQSAVFVRNVIKFRRDKPVEEIESALNRCD 120
Query: 121 LVLTDDFVLNVLRRHQSDWKPAFIFFNWVLKRGGEEVLYSPGSVIYNEILNILGKSRRFA 180
LVLTDDFVLNVLRRH+ DWKPAFIFFNWV KR +E +SPGSVIYNEIL+ILGKSRRF
Sbjct: 121 LVLTDDFVLNVLRRHRLDWKPAFIFFNWVTKRDTKEGQFSPGSVIYNEILDILGKSRRFE 180
Query: 181 EVDQVLVEMSKRKELVNEETYLVLLNRYAAAHKVEEAIDIFYRRQEFGLEMNLIAFQSLL 240
EVD+V VEMSKR+ELVNEETY VLLNRYAAAHKVEEAI IFYRRQEFGLEMNL+AFQSLL
Sbjct: 181 EVDKVFVEMSKREELVNEETYSVLLNRYAAAHKVEEAIGIFYRRQEFGLEMNLVAFQSLL 240
Query: 241 MWLCRYKHVEVAETLFHSKKHEFSIDIKTNNIILNGWCVLGNVHEAKRFWREIVESKCEP 300
MWLCRYKHVE AETLFHSKKHEF DIKT+NIILNGWCVLGNVHEAKRFWREI+ESKCEP
Sbjct: 241 MWLCRYKHVEAAETLFHSKKHEFVTDIKTSNIILNGWCVLGNVHEAKRFWREIIESKCEP 300
Query: 301 DIYTYGILINSLTKKGKLGTALKLFRAMWERGLKPDVVICNCIIDALCFKKRIPEALDVF 360
D+YTYGILINSLTKKGKLGTALKLFRAMWERGLK DVVICNCIIDALCFKKRIPEAL++F
Sbjct: 301 DMYTYGILINSLTKKGKLGTALKLFRAMWERGLKTDVVICNCIIDALCFKKRIPEALEIF 360
Query: 361 KDMNKRGCASNIATYNTLIKHLCKIRRMEKVNELLDEMEEGKGSCWPNSVTFSYLLGSVR 420
K+MN+RGCASN+ATYNTLIKHLCKIRRMEKVNELLDEMEE KGS WPNSVTFSYLL SVR
Sbjct: 361 KEMNERGCASNVATYNTLIKHLCKIRRMEKVNELLDEMEERKGSYWPNSVTFSYLLRSVR 420
Query: 421 KPEEVPVLLQRMERSGCKMTSDTYNLILRLYMDWDIQERVKSTWNEMEKMGLGPDRRSYT 480
+PEEVPVLLQRMERSGCKMTSD YNLILRLYMDWDIQERVKSTWNEME+MGLGPDR SYT
Sbjct: 421 EPEEVPVLLQRMERSGCKMTSDLYNLILRLYMDWDIQERVKSTWNEMEEMGLGPDRCSYT 480
Query: 481 VMIHWLYEKGRIDDGLRYFREMTLKGMMLEPKTKKLVNAMNVKLQERRAK 531
+MIH L+EKGR DDGLRYFREMTLKGMM+EPKT+KLVNAMNVKLQERR K
Sbjct: 481 IMIHGLFEKGRKDDGLRYFREMTLKGMMVEPKTEKLVNAMNVKLQERRGK 530
BLAST of Lcy12g005780 vs. NCBI nr
Match:
XP_008447751.1 (PREDICTED: putative pentatricopeptide repeat-containing protein At3g15200 [Cucumis melo] >XP_008447752.1 PREDICTED: putative pentatricopeptide repeat-containing protein At3g15200 [Cucumis melo] >XP_016900496.1 PREDICTED: putative pentatricopeptide repeat-containing protein At3g15200 [Cucumis melo])
HSP 1 Score: 896.3 bits (2315), Expect = 1.2e-256
Identity = 435/523 (83.17%), Postives = 467/523 (89.29%), Query Frame = 0
Query: 1 MRFKFLWLRNITTEDFHGKFKLGFQSYMIKGLLPCAPTTQRPIFAISDHIHHIKIYEDQN 60
M+FK WLRNIT EDFHGKFKLGFQS ++KG LP PT+ RP +SD IHHI E N
Sbjct: 1 MKFKVSWLRNITAEDFHGKFKLGFQSNLVKGFLPHTPTSHRPFSVVSDRIHHILSCE--N 60
Query: 61 LTSRSRNCHEITLVSNSVVVSDESINVHRDDQSAVYVQNVLKFRRDKPVEEIERALNRCG 120
LT R RNCHE TLVSNS+ SDE I VHRDD SAVYVQNVL FRR KPVEEI+RAL+ C
Sbjct: 61 LTPRPRNCHERTLVSNSIADSDEPITVHRDDPSAVYVQNVLYFRRHKPVEEIDRALSLCD 120
Query: 121 LVLTDDFVLNVLRRHQSDWKPAFIFFNWVLKRGGEEVLYSPGSVIYNEILNILGKSRRFA 180
LVLT+DFVL VLRRH+SDWKPAFIFFNWV K+G E ++PGSVIYNEIL+ILGKS RF
Sbjct: 121 LVLTEDFVLKVLRRHRSDWKPAFIFFNWVTKKGTNEDKFTPGSVIYNEILDILGKSHRFE 180
Query: 181 EVDQVLVEMSKRKELVNEETYLVLLNRYAAAHKVEEAIDIFYRRQEFGLEMNLIAFQSLL 240
EVD+V VEMSKRKELVNEETY VLLNRYAAAHKVEEAI IFYRRQEFGLEMNLIAFQSLL
Sbjct: 181 EVDKVFVEMSKRKELVNEETYSVLLNRYAAAHKVEEAISIFYRRQEFGLEMNLIAFQSLL 240
Query: 241 MWLCRYKHVEVAETLFHSKKHEFSIDIKTNNIILNGWCVLGNVHEAKRFWREIVESKCEP 300
MWLCRYKHVE AETLFHSKKHEF IDIKT+NIILNGWCVLGNVHEAKRFWREI+ESKCEP
Sbjct: 241 MWLCRYKHVEAAETLFHSKKHEFVIDIKTSNIILNGWCVLGNVHEAKRFWREIIESKCEP 300
Query: 301 DIYTYGILINSLTKKGKLGTALKLFRAMWERGLKPDVVICNCIIDALCFKKRIPEALDVF 360
DIYTYG LINSLTKKGKLGTALKLFRAMWERGLK DVVICNCIIDALCFKKRIPEAL++F
Sbjct: 301 DIYTYGTLINSLTKKGKLGTALKLFRAMWERGLKTDVVICNCIIDALCFKKRIPEALEIF 360
Query: 361 KDMNKRGCASNIATYNTLIKHLCKIRRMEKVNELLDEMEEGKGSCWPNSVTFSYLLGSVR 420
K+MN+RGCA+N+ATYNTLIKHLCKIRRMEKVNELL+EMEE KGSCWPNSVTFSYLL S+R
Sbjct: 361 KEMNERGCAANVATYNTLIKHLCKIRRMEKVNELLNEMEERKGSCWPNSVTFSYLLRSIR 420
Query: 421 KPEEVPVLLQRMERSGCKMTSDTYNLILRLYMDWDIQERVKSTWNEMEKMGLGPDRRSYT 480
PEEVPVLLQRME SGCKMTSD YNLILRLYMDW+IQERVKSTWNEM++MGLGPDRRSYT
Sbjct: 421 GPEEVPVLLQRMETSGCKMTSDIYNLILRLYMDWNIQERVKSTWNEMKEMGLGPDRRSYT 480
Query: 481 VMIHWLYEKGRIDDGLRYFREMTLKGMMLEPKTKKLVNAMNVK 524
+MIH LYEKGR DGLRYF EMTL+G+M E KT+KLVNA NVK
Sbjct: 481 IMIHGLYEKGRTKDGLRYFNEMTLRGIMPESKTEKLVNATNVK 521
BLAST of Lcy12g005780 vs. NCBI nr
Match:
TYK23134.1 (putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 894.0 bits (2309), Expect = 6.1e-256
Identity = 434/523 (82.98%), Postives = 466/523 (89.10%), Query Frame = 0
Query: 1 MRFKFLWLRNITTEDFHGKFKLGFQSYMIKGLLPCAPTTQRPIFAISDHIHHIKIYEDQN 60
M+FK WLRNIT EDFHGKFKLGFQS ++KG LP PT+ RP +SD IHHI E N
Sbjct: 1 MKFKVPWLRNITAEDFHGKFKLGFQSNLVKGFLPHTPTSHRPFSVVSDRIHHILSCE--N 60
Query: 61 LTSRSRNCHEITLVSNSVVVSDESINVHRDDQSAVYVQNVLKFRRDKPVEEIERALNRCG 120
LT R RNCHE TL SNS+ SDE I VHRDD SAVYVQNVL FRR KPVEEI+RAL+ C
Sbjct: 61 LTPRPRNCHERTLFSNSIADSDEPITVHRDDPSAVYVQNVLYFRRHKPVEEIDRALSLCD 120
Query: 121 LVLTDDFVLNVLRRHQSDWKPAFIFFNWVLKRGGEEVLYSPGSVIYNEILNILGKSRRFA 180
LVLT+DFVL VLRRH+SDWKPAFIFFNWV K+G E ++PGSVIYNEIL+ILGKS RF
Sbjct: 121 LVLTEDFVLKVLRRHRSDWKPAFIFFNWVTKKGTNEDKFTPGSVIYNEILDILGKSHRFE 180
Query: 181 EVDQVLVEMSKRKELVNEETYLVLLNRYAAAHKVEEAIDIFYRRQEFGLEMNLIAFQSLL 240
EVD+V VEMSKRKELVNEETY VLLNRYAAAHKVEEAI IFYRRQEFGLEMNLIAFQSLL
Sbjct: 181 EVDKVFVEMSKRKELVNEETYSVLLNRYAAAHKVEEAISIFYRRQEFGLEMNLIAFQSLL 240
Query: 241 MWLCRYKHVEVAETLFHSKKHEFSIDIKTNNIILNGWCVLGNVHEAKRFWREIVESKCEP 300
MWLCRYKHVE AETLFHSKKHEF IDIKT+NIILNGWCVLGNVHEAKRFWREI+ESKCEP
Sbjct: 241 MWLCRYKHVEAAETLFHSKKHEFVIDIKTSNIILNGWCVLGNVHEAKRFWREIIESKCEP 300
Query: 301 DIYTYGILINSLTKKGKLGTALKLFRAMWERGLKPDVVICNCIIDALCFKKRIPEALDVF 360
DIYTYG LINSLTKKGKLGTALKLFRAMWERGLK DVVICNCIIDALCFKKRIPEAL++F
Sbjct: 301 DIYTYGTLINSLTKKGKLGTALKLFRAMWERGLKTDVVICNCIIDALCFKKRIPEALEIF 360
Query: 361 KDMNKRGCASNIATYNTLIKHLCKIRRMEKVNELLDEMEEGKGSCWPNSVTFSYLLGSVR 420
K+MN+RGCA+N+ATYNTLIKHLCKIRRMEKVNELL+EMEE KGSCWPNSVTFSYLL S+R
Sbjct: 361 KEMNERGCAANVATYNTLIKHLCKIRRMEKVNELLNEMEERKGSCWPNSVTFSYLLRSIR 420
Query: 421 KPEEVPVLLQRMERSGCKMTSDTYNLILRLYMDWDIQERVKSTWNEMEKMGLGPDRRSYT 480
PEEVPVLLQRME SGCKMTSD YNLILRLYMDW+IQERVKSTWNEM++MGLGPDRRSYT
Sbjct: 421 GPEEVPVLLQRMETSGCKMTSDIYNLILRLYMDWNIQERVKSTWNEMKEMGLGPDRRSYT 480
Query: 481 VMIHWLYEKGRIDDGLRYFREMTLKGMMLEPKTKKLVNAMNVK 524
+MIH LYEKGR DGLRYF EMTL+G+M E KT+KLVNA NVK
Sbjct: 481 IMIHGLYEKGRTKDGLRYFNEMTLRGIMPESKTEKLVNATNVK 521
BLAST of Lcy12g005780 vs. NCBI nr
Match:
XP_022972875.1 (putative pentatricopeptide repeat-containing protein At3g15200 isoform X1 [Cucurbita maxima])
HSP 1 Score: 893.3 bits (2307), Expect = 1.0e-255
Identity = 430/528 (81.44%), Postives = 475/528 (89.96%), Query Frame = 0
Query: 1 MRFKFLWLRNITTEDFHGKFKLGFQSYMIKGLLPCAPTTQRPIFAISDHIHHIKIYEDQN 60
MRFKFLWLRN E+FHGKF+LGFQ+Y+IKG+LP P + RP F ISDHIHH + YE
Sbjct: 1 MRFKFLWLRNNAAENFHGKFRLGFQAYLIKGVLPHTPISYRPFFGISDHIHHTQTYE--- 60
Query: 61 LTSRSRNCHEITLVSNSVVVSDESINVHRDDQSAVYVQNVLKFRRDKPVEEIERALNRCG 120
+RNCHE T +SN V VSD+S NV+ DQSAVYVQNVLKFRR KPVEEIE ALNRC
Sbjct: 61 ---TTRNCHETTKLSNPVAVSDDSFNVY--DQSAVYVQNVLKFRRHKPVEEIETALNRCS 120
Query: 121 LVLTDDFVLNVLRRHQSDWKPAFIFFNWVLKRGGEEVLYSPGSVIYNEILNILGKSRRFA 180
LVLTDDFVL VLRRH+SDWKPAF FFNWV KRG E YSPGSVIYNEIL+ILGKSRRF
Sbjct: 121 LVLTDDFVLQVLRRHRSDWKPAFDFFNWVTKRGNGEGEYSPGSVIYNEILDILGKSRRFE 180
Query: 181 EVDQVLVEMSKRKELVNEETYLVLLNRYAAAHKVEEAIDIFYRRQEFGLEMNLIAFQSLL 240
EVD+V VEMSKRK+LVNEETYLVLLNRYAAAHKVEEAIDIF+RRQ+ GLEMNLIAFQSLL
Sbjct: 181 EVDKVFVEMSKRKKLVNEETYLVLLNRYAAAHKVEEAIDIFHRRQQLGLEMNLIAFQSLL 240
Query: 241 MWLCRYKHVEVAETLFHSKKHEFSIDIKTNNIILNGWCVLGNVHEAKRFWREIVESKCEP 300
MWLCRYKHVE+AETLFHSKKHEF DIKT+NI+LNGWCVLGNVHEAKRFWREI+ESK EP
Sbjct: 241 MWLCRYKHVEIAETLFHSKKHEFFPDIKTSNIVLNGWCVLGNVHEAKRFWREIIESKWEP 300
Query: 301 DIYTYGILINSLTKKGKLGTALKLFRAMWERGLKPDVVICNCIIDALCFKKRIPEALDVF 360
DIYTYG LINSLTKKGKLGTAL L+RAMWE+GLKPDVVICNCIIDALCFKKRIPEAL++F
Sbjct: 301 DIYTYGTLINSLTKKGKLGTALNLYRAMWEKGLKPDVVICNCIIDALCFKKRIPEALEIF 360
Query: 361 KDMNKRGCASNIATYNTLIKHLCKIRRMEKVNELLDEMEEGKGSCWPNSVTFSYLLGSVR 420
K+MN+RGCASN+ATYNTLIKHLCKIRRMEKVNELLDEM E SCWPNSVTFSYLL SVR
Sbjct: 361 KEMNERGCASNVATYNTLIKHLCKIRRMEKVNELLDEMVERNRSCWPNSVTFSYLLASVR 420
Query: 421 KPEEVPVLLQRMERSGCKMTSDTYNLILRLYMDWDIQERVKSTWNEMEKMGLGPDRRSYT 480
+PEE+P L++RMERSGCKM+SDTYNLILRLYM+WDI+ERVK TWNEME++GLGPDRRSYT
Sbjct: 421 EPEEIPKLVERMERSGCKMSSDTYNLILRLYMEWDIEERVKCTWNEMEEIGLGPDRRSYT 480
Query: 481 VMIHWLYEKGRIDDGLRYFREMTLKGMMLEPKTKKLVNAMNVKLQERR 529
+MIH LYEKGR ++GLRY+REMTLKGMM+E KT++LVNAMNVKLQ+RR
Sbjct: 481 IMIHGLYEKGRKEEGLRYYREMTLKGMMVEAKTERLVNAMNVKLQKRR 520
BLAST of Lcy12g005780 vs. NCBI nr
Match:
XP_022972877.1 (putative pentatricopeptide repeat-containing protein At3g15200 isoform X2 [Cucurbita maxima] >XP_022972878.1 putative pentatricopeptide repeat-containing protein At3g15200 isoform X2 [Cucurbita maxima] >XP_022972879.1 putative pentatricopeptide repeat-containing protein At3g15200 isoform X2 [Cucurbita maxima])
HSP 1 Score: 893.3 bits (2307), Expect = 1.0e-255
Identity = 430/528 (81.44%), Postives = 475/528 (89.96%), Query Frame = 0
Query: 1 MRFKFLWLRNITTEDFHGKFKLGFQSYMIKGLLPCAPTTQRPIFAISDHIHHIKIYEDQN 60
MRFKFLWLRN E+FHGKF+LGFQ+Y+IKG+LP P + RP F ISDHIHH + YE
Sbjct: 1 MRFKFLWLRNNAAENFHGKFRLGFQAYLIKGVLPHTPISYRPFFGISDHIHHTQTYE--- 60
Query: 61 LTSRSRNCHEITLVSNSVVVSDESINVHRDDQSAVYVQNVLKFRRDKPVEEIERALNRCG 120
+RNCHE T +SN V VSD+S NV+ DQSAVYVQNVLKFRR KPVEEIE ALNRC
Sbjct: 61 ---TTRNCHETTKLSNPVAVSDDSFNVY--DQSAVYVQNVLKFRRHKPVEEIETALNRCS 120
Query: 121 LVLTDDFVLNVLRRHQSDWKPAFIFFNWVLKRGGEEVLYSPGSVIYNEILNILGKSRRFA 180
LVLTDDFVL VLRRH+SDWKPAF FFNWV KRG E YSPGSVIYNEIL+ILGKSRRF
Sbjct: 121 LVLTDDFVLQVLRRHRSDWKPAFDFFNWVTKRGNGEGEYSPGSVIYNEILDILGKSRRFE 180
Query: 181 EVDQVLVEMSKRKELVNEETYLVLLNRYAAAHKVEEAIDIFYRRQEFGLEMNLIAFQSLL 240
EVD+V VEMSKRK+LVNEETYLVLLNRYAAAHKVEEAIDIF+RRQ+ GLEMNLIAFQSLL
Sbjct: 181 EVDKVFVEMSKRKKLVNEETYLVLLNRYAAAHKVEEAIDIFHRRQQLGLEMNLIAFQSLL 240
Query: 241 MWLCRYKHVEVAETLFHSKKHEFSIDIKTNNIILNGWCVLGNVHEAKRFWREIVESKCEP 300
MWLCRYKHVE+AETLFHSKKHEF DIKT+NI+LNGWCVLGNVHEAKRFWREI+ESK EP
Sbjct: 241 MWLCRYKHVEIAETLFHSKKHEFFPDIKTSNIVLNGWCVLGNVHEAKRFWREIIESKWEP 300
Query: 301 DIYTYGILINSLTKKGKLGTALKLFRAMWERGLKPDVVICNCIIDALCFKKRIPEALDVF 360
DIYTYG LINSLTKKGKLGTAL L+RAMWE+GLKPDVVICNCIIDALCFKKRIPEAL++F
Sbjct: 301 DIYTYGTLINSLTKKGKLGTALNLYRAMWEKGLKPDVVICNCIIDALCFKKRIPEALEIF 360
Query: 361 KDMNKRGCASNIATYNTLIKHLCKIRRMEKVNELLDEMEEGKGSCWPNSVTFSYLLGSVR 420
K+MN+RGCASN+ATYNTLIKHLCKIRRMEKVNELLDEM E SCWPNSVTFSYLL SVR
Sbjct: 361 KEMNERGCASNVATYNTLIKHLCKIRRMEKVNELLDEMVERNRSCWPNSVTFSYLLASVR 420
Query: 421 KPEEVPVLLQRMERSGCKMTSDTYNLILRLYMDWDIQERVKSTWNEMEKMGLGPDRRSYT 480
+PEE+P L++RMERSGCKM+SDTYNLILRLYM+WDI+ERVK TWNEME++GLGPDRRSYT
Sbjct: 421 EPEEIPKLVERMERSGCKMSSDTYNLILRLYMEWDIEERVKCTWNEMEEIGLGPDRRSYT 480
Query: 481 VMIHWLYEKGRIDDGLRYFREMTLKGMMLEPKTKKLVNAMNVKLQERR 529
+MIH LYEKGR ++GLRY+REMTLKGMM+E KT++LVNAMNVKLQ+RR
Sbjct: 481 IMIHGLYEKGRKEEGLRYYREMTLKGMMVEAKTERLVNAMNVKLQKRR 520
BLAST of Lcy12g005780 vs. TAIR 10
Match:
AT3G15200.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 537.3 bits (1383), Expect = 1.3e-152
Identity = 251/438 (57.31%), Postives = 338/438 (77.17%), Query Frame = 0
Query: 86 NVHRDDQSAVYVQNVLKFRRDKPVEEIERALNRCGLVLTDDFVLNVLRRHQSDWKPAFIF 145
N +D QSA+ V N++K R E+I+R L++CG+ LT++ VL V+ R++SDWKPA+I
Sbjct: 70 NDDKDKQSALDVHNIIKHHRGSSPEKIKRILDKCGIDLTEELVLEVVNRNRSDWKPAYIL 129
Query: 146 FNWVLKRGGEEVLYSPGSVIYNEILNILGKSRRFAEVDQVLVEMSKRKELVNEETYLVLL 205
V+K+ ++ S++YNEIL++LGK RRF E QV EMSKR VNE+TY VLL
Sbjct: 130 SQLVVKQS----VHLSSSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLL 189
Query: 206 NRYAAAHKVEEAIDIFYRRQEFGLEMNLIAFQSLLMWLCRYKHVEVAETLFHSKKHEFSI 265
NRYAAAHKV+EA+ +F RR+EFG++ +L+AF LLMWLCRYKHVE AETLF S++ EF
Sbjct: 190 NRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGC 249
Query: 266 DIKTNNIILNGWCVLGNVHEAKRFWREIVESKCEPDIYTYGILINSLTKKGKLGTALKLF 325
DIK N+ILNGWCVLGNVHEAKRFW++I+ SKC PD+ +YG +IN+LTKKGKLG A++L+
Sbjct: 250 DIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELY 309
Query: 326 RAMWERGLKPDVVICNCIIDALCFKKRIPEALDVFKDMNKRGCASNIATYNTLIKHLCKI 385
RAMW+ PDV ICN +IDALCFKKRIPEAL+VF++++++G N+ TYN+L+KHLCKI
Sbjct: 310 RAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKI 369
Query: 386 RRMEKVNELLDEMEEGKGSCWPNSVTFSYLLGSVRKPEEVPVLLQRMERSGCKMTSDTYN 445
RR EKV EL++EME GSC PN VTFSYLL ++ ++V ++L+RM ++ C+MTSD YN
Sbjct: 370 RRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYN 429
Query: 446 LILRLYMDWDIQERVKSTWNEMEKMGLGPDRRSYTVMIHWLYEKGRIDDGLRYFREMTLK 505
L+ RLY+ WD +E+V+ W+EME+ GLGPD+R+YT+ IH L+ KG+I + L YF+EM K
Sbjct: 430 LMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSK 489
Query: 506 GMMLEPKTKKLVNAMNVK 524
GM+ EP+T+ L+N K
Sbjct: 490 GMVPEPRTEMLLNQNKTK 503
BLAST of Lcy12g005780 vs. TAIR 10
Match:
AT5G15010.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 270.0 bits (689), Expect = 4.0e-72
Identity = 159/466 (34.12%), Postives = 255/466 (54.72%), Query Frame = 0
Query: 72 TLVSNSVVVSDESINVHRDDQSAV-------------YVQNVLKFRRD--KPVEEIERAL 131
T +++S V N+ +DD+S + V + K +D +E+ L
Sbjct: 59 TSIADSEQVGFTRSNIEKDDESDIDLGCSISDELVSEDVGKISKLVKDCGSDRKELRNKL 118
Query: 132 NRCGLVLTDDFVLNVLRRHQSDWKPAFIFFNWVLKRGGEEVLYSPGSVIYNEILNILGKS 191
C + +++ V+ +L R ++DW+ AF FF W K+ G Y Y+ +++ILGK
Sbjct: 119 EECDVKPSNELVVEILSRVRNDWETAFTFFVWAGKQQG----YVRSVREYHSMISILGKM 178
Query: 192 RRFAEVDQVLVEMSK-RKELVNEETYLVLLNRYAAAHKVEEAIDIFYRRQEFGLEMNLIA 251
R+F ++ EM K LVN +T L+++ +Y A H V +AI+ F+ + F LEM +
Sbjct: 179 RKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDD 238
Query: 252 FQSLLMWLCRYKHVEVAETLFHSKKHEFSIDIKTNNIILNGWC-VLGNVHEAKRFWREIV 311
FQSLL LCRYK+V A L K ++ D K+ NI+LNGWC V+G+ EA+R W E+
Sbjct: 239 FQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMG 298
Query: 312 ESKCEPDIYTYGILINSLTKKGKLGTALKLFRAMWERGLKPDVVICNCIIDALCFKKRIP 371
+ D+ +Y +I+ +K G L LKLF M + ++PD + N ++ AL +
Sbjct: 299 NVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVS 358
Query: 372 EALDVFKDM-NKRGCASNIATYNTLIKHLCKIRRMEKVNELLDEMEEGKGSCWPNSVTFS 431
EA ++ K M ++G N+ TYN+LIK LCK R+ E+ ++ DEM E KG +P T+
Sbjct: 359 EARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLE-KG-LFPTIRTYH 418
Query: 432 YLLGSVRKPEEVPVLLQRMERSGCKMTSDTYNLILRLYMDWDIQERVKSTWNEMEKMGLG 491
+ +R EEV LL +M + GC+ T +TY +++R W + V W+EM++ +G
Sbjct: 419 AFMRILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVG 478
Query: 492 PDRRSYTVMIHWLYEKGRIDDGLRYFREMTLKGMMLEPKTKKLVNA 520
PD SY VMIH L+ G+I++ Y++EM KGM + ++ +
Sbjct: 479 PDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMIQS 518
BLAST of Lcy12g005780 vs. TAIR 10
Match:
AT1G80550.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 229.2 bits (583), Expect = 7.9e-60
Identity = 130/386 (33.68%), Postives = 209/386 (54.15%), Query Frame = 0
Query: 128 VLNVLRRHQSDWKPAFIFFNWVLKRGGEEVLYSPGSVIYNEILNILGKSRRFAEVDQVLV 187
V L + +DW+ A FFNWV + G + + +N +++ILGK F E+ L+
Sbjct: 50 VCEALTCYSNDWQKALEFFNWVERESG----FRHTTETFNRVIDILGKYFEF-EISWALI 109
Query: 188 E--MSKRKELVNEETYLVLLNRYAAAHKVEEAIDIFYRRQEFGLEMNLIAFQSLLMWLCR 247
+ + + N T+ ++ RY AH V+EAID + + +F L + +F +L+ LC
Sbjct: 110 NRMIGNTESVPNHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLR-DETSFYNLVDALCE 169
Query: 248 YKHVEVAETLFHSKK---HEFSI-DIKTNNIILNGWCVLGNVHEAKRFWREIVESKCEPD 307
+KHV AE L K + FS+ + K +N+IL GW LG + K +W+++ D
Sbjct: 170 HKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKD 229
Query: 308 IYTYGILINSLTKKGKLGTALKLFRAMWERGLKPDVVICNCIIDALCFKKRIPEALDVFK 367
+++Y I ++ + K GK A+KL++ M R +K DVV N +I A+ + + + VF+
Sbjct: 230 LFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFR 289
Query: 368 DMNKRGCASNIATYNTLIKHLCKIRRMEKVNELLDEMEEGKGSCWPNSVTFSYLLGSVRK 427
+M +RGC N+AT+NT+IK LC+ RM +LDEM K C P+S+T+ L + K
Sbjct: 290 EMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMP--KRGCQPDSITYMCLFSRLEK 349
Query: 428 PEEVPVLLQRMERSGCKMTSDTYNLILRLYMDWDIQERVKSTWNEMEKMGLGPDRRSYTV 487
P E+ L RM RSG + DTY +++R + W + V W M++ G PD +Y
Sbjct: 350 PSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNA 409
Query: 488 MIHWLYEKGRIDDGLRYFREMTLKGM 508
+I L +KG +D Y EM +G+
Sbjct: 410 VIDALIQKGMLDMAREYEEEMIERGL 427
BLAST of Lcy12g005780 vs. TAIR 10
Match:
AT3G49730.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 211.1 bits (536), Expect = 2.2e-54
Identity = 138/467 (29.55%), Postives = 234/467 (50.11%), Query Frame = 0
Query: 69 HEITLVSNSVVVSDESIN-------VHRDDQSAVYVQNVLKFRRD--KPVEEIERALNRC 128
H +++N V S E N +D+ A V+ + + R+ V ++E ALN
Sbjct: 32 HISRVLNNDFVESTERKNGVGLVCPEKHEDEFAGEVEKIYRILRNHHSRVPKLELALNES 91
Query: 129 GLVLTDDFVLNVLRRHQSDWKPAFIFFNWVLKRGGEEVLYSPGSVIYNEILNILGKSRRF 188
G+ L ++ VL R + FF W K+ G Y + ++ IL K R+F
Sbjct: 92 GIDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQPG----YFHSYEVCKSMVMILSKMRQF 151
Query: 189 AEVDQVLVEMSK-RKELVNEETYLVLLNRYAAAHKVEEAIDIFYRRQEFGLEMNLIAFQS 248
V ++ EM K EL+ E ++VL+ R+A+A+ V++A+++ ++GLE + F
Sbjct: 152 GAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGC 211
Query: 249 LLMWLCRYKHVEVAETLFHSKKHEFSIDIKTNNIILNGWCVLGNVHEAKRFWREIVESKC 308
LL LC+ V+ A +F + +F +++ +L GWC G + EAK ++ E+
Sbjct: 212 LLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGL 271
Query: 309 EPDIYTYGILINSLTKKGKLGTALKLFRAMWERGLKPDVVICNCIIDALC-FKKRIPEAL 368
EPDI + L++ GK+ A L M +RG +P+V +I ALC +KR+ EA+
Sbjct: 272 EPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAM 331
Query: 369 DVFKDMNKRGCASNIATYNTLIKHLCKIRRMEKVNELLDEMEEGKGSCWPNSVTFSYLLG 428
VF +M + GC ++I TY LI CK ++K +LD+M K P+ VT+ ++
Sbjct: 332 RVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMR--KKGVMPSQVTYMQIMV 391
Query: 429 SVRKP---EEVPVLLQRMERSGCKMTSDTYNLILRLYMDWDIQERVKSTWNEMEKMGLGP 488
+ K EE L+++M+R GC YN+++RL + WNEME GL P
Sbjct: 392 AHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSP 451
Query: 489 DRRSYTVMIHWLYEKGRIDDGLRYFREMTLKGMMLEPKTKKLVNAMN 522
++ +MI+ +G + + +F+EM +G+ P+ L + +N
Sbjct: 452 GVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLN 492
BLAST of Lcy12g005780 vs. TAIR 10
Match:
AT3G62470.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 207.6 bits (527), Expect = 2.4e-53
Identity = 125/399 (31.33%), Postives = 211/399 (52.88%), Query Frame = 0
Query: 112 IERALNRCGLVLTDDFVLNVLRRHQSDWKPAFIFFNWVLKRGGEEVLYSPGSVIYNEILN 171
+E L+ L L+ D ++ VL R + KPAF FF W +R G ++ S YN +++
Sbjct: 148 MEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQG----FAHDSRTYNSMMS 207
Query: 172 ILGKSRRFAEVDQVLVEMSKRKELVNEETYLVLLNRYAAAHKVEEAIDIFYRRQEFGLEM 231
IL K+R+F + VL EM K L+ ET+ + + +AAA + ++A+ IF +++ ++
Sbjct: 208 ILAKTRQFETMVSVLEEMG-TKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKI 267
Query: 232 NLIAFQSLLMWLCRYKHVEVAETLFHSKKHEFSIDIKTNNIILNGWCVLGNVHEAKRFWR 291
+ LL L R K + A+ LF K F+ ++ T ++LNGWC + N+ EA R W
Sbjct: 268 GVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWN 327
Query: 292 EIVESKCEPDIYTYGILINSLTKKGKLGTALKLFRAMWERGLKPDVVICNCIIDALCFKK 351
++++ +PDI + +++ L + K A+KLF M +G P+V +I C +
Sbjct: 328 DMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQS 387
Query: 352 RIPEALDVFKDMNKRGCASNIATYNTLIKHLCKIRRMEKVNELLDEMEEGKGSCWPNSVT 411
+ A++ F DM G + A Y LI ++++ V ELL EM+E KG P+ T
Sbjct: 388 SMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQE-KGHP-PDGKT 447
Query: 412 FS---YLLGSVRKPEEVPVLLQRMERSGCKMTSDTYNLILRLYMDWDIQERVKSTWNEME 471
++ L+ + + PE + +M ++ + + T+N+I++ Y E ++ W EM
Sbjct: 448 YNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMI 507
Query: 472 KMGLGPDRRSYTVMIHWLYEKGRIDDGLRYFREMTLKGM 508
K G+ PD SYTV+I L +G+ + RY EM KGM
Sbjct: 508 KKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGM 539
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9LIL5 | 1.9e-151 | 57.31 | Putative pentatricopeptide repeat-containing protein At3g15200 OS=Arabidopsis th... | [more] |
Q9LFQ4 | 5.7e-71 | 34.12 | Pentatricopeptide repeat-containing protein At5g15010, mitochondrial OS=Arabidop... | [more] |
Q9M8M3 | 1.1e-58 | 33.68 | Pentatricopeptide repeat-containing protein At1g80550, mitochondrial OS=Arabidop... | [more] |
P0C8A0 | 3.1e-53 | 29.55 | Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana OX... | [more] |
Q9LZP3 | 3.4e-52 | 31.33 | Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A1S3BIS0 | 5.9e-257 | 83.17 | putative pentatricopeptide repeat-containing protein At3g15200 OS=Cucumis melo O... | [more] |
A0A5D3DHN3 | 3.0e-256 | 82.98 | Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa... | [more] |
A0A6J1ICV5 | 5.0e-256 | 81.44 | putative pentatricopeptide repeat-containing protein At3g15200 isoform X2 OS=Cuc... | [more] |
A0A6J1I9V6 | 5.0e-256 | 81.44 | putative pentatricopeptide repeat-containing protein At3g15200 isoform X1 OS=Cuc... | [more] |
A0A6J1EW48 | 5.6e-255 | 82.01 | putative pentatricopeptide repeat-containing protein At3g15200 isoform X1 OS=Cuc... | [more] |
Match Name | E-value | Identity | Description | |
XP_038899171.1 | 1.8e-268 | 85.66 | putative pentatricopeptide repeat-containing protein At3g15200 [Benincasa hispid... | [more] |
XP_008447751.1 | 1.2e-256 | 83.17 | PREDICTED: putative pentatricopeptide repeat-containing protein At3g15200 [Cucum... | [more] |
TYK23134.1 | 6.1e-256 | 82.98 | putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] | [more] |
XP_022972875.1 | 1.0e-255 | 81.44 | putative pentatricopeptide repeat-containing protein At3g15200 isoform X1 [Cucur... | [more] |
XP_022972877.1 | 1.0e-255 | 81.44 | putative pentatricopeptide repeat-containing protein At3g15200 isoform X2 [Cucur... | [more] |
Match Name | E-value | Identity | Description | |
AT3G15200.1 | 1.3e-152 | 57.31 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G15010.1 | 4.0e-72 | 34.12 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G80550.1 | 7.9e-60 | 33.68 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G49730.1 | 2.2e-54 | 29.55 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G62470.1 | 2.4e-53 | 31.33 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |