Lcy12g005590 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy12g005590
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	O-fucosyltransferase family protein
Location	Chr12: 22145339 .. 22146768 (+)
RNA-Seq Expression	Lcy12g005590
Synteny	Lcy12g005590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGATAACAGATGTTGCACCATACATTTTGAATGTCACTCTAGTTGTTCCCAAGCTGGATCAAAATTCCTTTCGGAAGGATAGCAGGTTTGATATAAATATTTTTCAATCAAACCCTCTAAGAGGCTACTTTCCTAGTAGTCAATTATGTTGGTGAAAGTAAACTTGGTAGATCTACAATATTCTATAGGAGGCCCTGGCTTATTTGGTATTCTAGAAAGTTTCACGTTCGTGGAGTAAATTGTTTGCAAACTCCAATTTCAAGTGTTGTGTATATGTCATATATACATCTATTGTCCTTTCTAGTTTTGTGAAAGCATTTTGATAATTGAAAAATTGGGTCATGTTCTTAAGGTTTTCTTTTCTGCTCTGCAGGCTGTTCGGCTTGGAAAATTTGATTATAGGCTTTCAAATAGATTGACAACGGACTTACAAAAGTTAAGATGTAAAGTTAACTATCTTGCTTTAAAGTTTACTGATGAGATCAATGAAATGGGCCAAATGTTGGTTGAGAGGTTGAGGATGAAAAGCAAACATTTTATTGCCCTACATTTGGTGATGCAATCAAGTATTCTTTAACTGCCCTAATGTGCTAGCAGTAGCTTATCTAATTTATTGGCTTCTAAAGCTTGCATCCACATAATATTATAACAATATTATAGCTAAATCCATCTGAGTAACGTGATTAGATGAATTTCTGTTGCGACTAATGTTATTAGTTTACGTATTCAGTTTTTATTACTGTGATGGCATAACTTGATATAGCTGGACAAAAATTTAATCTATATTAACCAAAAAGATATTTGCATCCTGTAAAAGATGCCTGTTTAAACTTTTAGATTTAAATCTTTGTAGAATTTTTGTGAATGACAATTTGGATATCTGTTGATGTATGTTTGGTGTGTCATCATATAGGTTTGAGCCTGACATGCTTGCATTTTCTGGCTGTTATTATGGTGGGGGAGAAGCTGAAAAGGAAGAACTTGGAGAAATTCGAAAGAGATGGAAAAGTTTACATGTAAGGTTTCATTTTGTTCTTGAAAACATGTAAGCAATGTTTTTGTCACAAACAACAATGGAAACATGGCAAAGGTTTTAGCAGGACGAAGGTACGTTACATTCGCGTCCCTCGCTCCATTTTAGTAAAATCTTTAAGCAACCAATCCAATTTCAAGCTTTACCAACACCATTCTTGCTTTACACAGTCATACAGAAGATGTTAAGGAAACCAACAATGGCTGCAAAGAGACAAGCAATTTGACAGACGAACAAACAACAACAGAAGACGAACAAGGCTGGTCTGGCTTGGAATACTTAGAAATTGGAGGCGAGTTGGGAGAGAAAAGATTGCCCATAATCATTGACTCTGATCTTGGTGTTCAAGCCAAGCTTGAACGACCAAAATTAGAAGAGTTATTTTCAAACTAA

mRNA sequence

ATGCAGATAACAGATGTTGCACCATACATTTTGAATGTCACTCTAGTTGTTCCCAAGCTGGATCAAAATTCCTTTCGGAAGGATAGCAGGTTTGAGCCTGACATGCTTGCATTTTCTGGCTGTTATTATGGTGGGGGAGAAGCTGAAAAGGAAGAACTTGGAGAAATTCGAAAGAGATGGAAAAGTTTACATGTAAGGTTTCATTTTGTTCTTGAAAACATTCATACAGAAGATGTTAAGGAAACCAACAATGGCTGCAAAGAGACAAGCAATTTGACAGACGAACAAACAACAACAGAAGACGAACAAGGCTGGTCTGGCTTGGAATACTTAGAAATTGGAGGCGAGTTGGGAGAGAAAAGATTGCCCATAATCATTGACTCTGATCTTGGTGTTCAAGCCAAGCTTGAACGACCAAAATTAGAAGAGTTATTTTCAAACTAA

Coding sequence (CDS)

ATGCAGATAACAGATGTTGCACCATACATTTTGAATGTCACTCTAGTTGTTCCCAAGCTGGATCAAAATTCCTTTCGGAAGGATAGCAGGTTTGAGCCTGACATGCTTGCATTTTCTGGCTGTTATTATGGTGGGGGAGAAGCTGAAAAGGAAGAACTTGGAGAAATTCGAAAGAGATGGAAAAGTTTACATGTAAGGTTTCATTTTGTTCTTGAAAACATTCATACAGAAGATGTTAAGGAAACCAACAATGGCTGCAAAGAGACAAGCAATTTGACAGACGAACAAACAACAACAGAAGACGAACAAGGCTGGTCTGGCTTGGAATACTTAGAAATTGGAGGCGAGTTGGGAGAGAAAAGATTGCCCATAATCATTGACTCTGATCTTGGTGTTCAAGCCAAGCTTGAACGACCAAAATTAGAAGAGTTATTTTCAAACTAA

Protein sequence

MQITDVAPYILNVTLVVPKLDQNSFRKDSRFEPDMLAFSGCYYGGGEAEKEELGEIRKRWKSLHVRFHFVLENIHTEDVKETNNGCKETSNLTDEQTTTEDEQGWSGLEYLEIGGELGEKRLPIIIDSDLGVQAKLERPKLEELFSN

Homology

[Close]

BLAST of Lcy12g005590 vs. ExPASy Swiss-Prot
Match: F4HSU3 (O-fucosyltransferase 6 OS=Arabidopsis thaliana OX=3702 GN=OFUT6 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.6e-12
Identity = 31/36 (86.11%), Postives = 34/36 (94.44%), Query Frame = 0


Query: 30  RFEPDMLAFSGCYYGGGEAEKEELGEIRKRWKSLHV 66
           RFEPDMLAFSGCYYGGGE EK+ELG IR+RWK+LHV
Sbjct: 279 RFEPDMLAFSGCYYGGGEKEKKELGTIRRRWKTLHV 314

[Close]

BLAST of Lcy12g005590 vs. ExPASy Swiss-Prot
Match: Q949U4 (O-fucosyltransferase 16 OS=Arabidopsis thaliana OX=3702 GN=OFUT16 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.5e-10
Identity = 26/36 (72.22%), Postives = 32/36 (88.89%), Query Frame = 0


Query: 30  RFEPDMLAFSGCYYGGGEAEKEELGEIRKRWKSLHV 66
           R+EPDMLAFSGCYYGGG+ E+ EL  IR+RWK+LH+
Sbjct: 276 RYEPDMLAFSGCYYGGGDKERRELAAIRRRWKTLHI 311

[Close]

BLAST of Lcy12g005590 vs. ExPASy Swiss-Prot
Match: Q9SVE6 (Protein ROOT HAIR SPECIFIC 17 OS=Arabidopsis thaliana OX=3702 GN=RHS17 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.0e-10
Identity = 27/35 (77.14%), Postives = 32/35 (91.43%), Query Frame = 0


Query: 30  RFEPDMLAFSGCYYGGGEAEKEELGEIRKRWKSLH 65
           RFEPDMLAFSGCYYGGG+ E+ ELG +R+RWK+LH
Sbjct: 295 RFEPDMLAFSGCYYGGGQKERLELGAMRRRWKTLH 329

[Close]

BLAST of Lcy12g005590 vs. ExPASy Swiss-Prot
Match: Q8LPF8 (O-fucosyltransferase 29 OS=Arabidopsis thaliana OX=3702 GN=OFUT29 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.4e-08
Identity = 26/34 (76.47%), Postives = 29/34 (85.29%), Query Frame = 0


Query: 30  RFEPDMLAFSGCYYGGGEAEKEELGEIRKRWKSL 64
           RFEPDMLAFSGC +GGGE E+ EL EIRKRW +L
Sbjct: 294 RFEPDMLAFSGCDFGGGEKERAELAEIRKRWDTL 327

[Close]

BLAST of Lcy12g005590 vs. ExPASy TrEMBL
Match: A0A6J1G7C7 (O-fucosyltransferase family protein OS=Cucurbita moschata OX=3662 GN=LOC111451493 PE=3 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 1.8e-17
Identity = 48/73 (65.75%), Postives = 60/73 (82.19%), Query Frame = 0


Query: 75  HTEDVKETNNGCKETSNLTDEQTTTEDEQGWSGLEYLEIGGELGEKRLPIIIDSDLGVQA 134
           HTEDV E N+G  ETSN T EQT TED+Q W+GLEYL+IG +LGE+RL  +I+SDLGV+ 
Sbjct: 537 HTEDVNENNHGYNETSNSTKEQTATEDDQEWTGLEYLDIGNDLGERRLHTLINSDLGVRP 596

Query: 135 KLERPKLEELFSN 148
           K E+P+LEELFS+
Sbjct: 597 KPEQPELEELFSD 609

[Close]

BLAST of Lcy12g005590 vs. ExPASy TrEMBL
Match: A0A6J1G7C7 (O-fucosyltransferase family protein OS=Cucurbita moschata OX=3662 GN=LOC111451493 PE=3 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 2.7e-10
Identity = 32/35 (91.43%), Postives = 34/35 (97.14%), Query Frame = 0


Query: 30  RFEPDMLAFSGCYYGGGEAEKEELGEIRKRWKSLH 65
           RFEPDMLAFSGCYYGGG+ EKEELG+IRKRWKSLH
Sbjct: 306 RFEPDMLAFSGCYYGGGQDEKEELGKIRKRWKSLH 340

HSP 2 Score: 97.8 bits (242), Expect = 3.9e-17
Identity = 48/73 (65.75%), Postives = 59/73 (80.82%), Query Frame = 0


Query: 75  HTEDVKETNNGCKETSNLTDEQTTTEDEQGWSGLEYLEIGGELGEKRLPIIIDSDLGVQA 134
           HTEDV E N+   ETSN T EQT TED+Q W+GLEYL+IG +LGE+RL  +I+SDLGVQ 
Sbjct: 537 HTEDVNENNHDYNETSNSTKEQTVTEDDQEWTGLEYLDIGNDLGERRLHTLINSDLGVQP 596

Query: 135 KLERPKLEELFSN 148
           K E+P+LEELFS+
Sbjct: 597 KPEQPELEELFSD 609

[Close]

BLAST of Lcy12g005590 vs. ExPASy TrEMBL
Match: A0A6J1I0N0 (O-fucosyltransferase family protein OS=Cucurbita maxima OX=3661 GN=LOC111469776 PE=3 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 3.6e-10
Identity = 32/35 (91.43%), Postives = 34/35 (97.14%), Query Frame = 0


Query: 30  RFEPDMLAFSGCYYGGGEAEKEELGEIRKRWKSLH 65
           RFEPDMLAFSGCYYGGG+ EKEELG+IRKRWKSLH
Sbjct: 306 RFEPDMLAFSGCYYGGGKDEKEELGKIRKRWKSLH 340

HSP 2 Score: 96.3 bits (238), Expect = 1.1e-16
Identity = 58/105 (55.24%), Postives = 69/105 (65.71%), Query Frame = 0


Query: 44  GGGEAEKEELGEIRKRWKSLHVRFHFVLENIHTEDVKETNNGCKETSNLTDEQT-TTEDE 103
           G GE  +     I +   S   R   +L N  T+DV   NNG KET  +T++QT  TED+
Sbjct: 501 GRGEFHENPSACICEESDSKAKRIPLLLPN-QTDDVMRNNNGYKETGKMTNDQTAATEDD 560

Query: 104 QGWSGLEYLEIGGELGEKRLPIIIDSDLGVQAKLERPKLEELFSN 148
           Q WSG+EYLEIG  LGEKRL  I DSDLGVQAK ERP+LEELFS+
Sbjct: 561 QDWSGMEYLEIGVGLGEKRLANISDSDLGVQAKPERPELEELFSD 604

[Close]

BLAST of Lcy12g005590 vs. ExPASy TrEMBL
Match: A0A0A0KAX8 (O-fucosyltransferase family protein OS=Cucumis sativus OX=3659 GN=Csa_6G120430 PE=3 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 1.7e-12
Identity = 44/73 (60.27%), Postives = 55/73 (75.34%), Query Frame = 0


Query: 75  HTEDVKETNNGCKETSNLTDEQTTTEDEQGWSGLEYLEIGGELGEKRLPIIIDSDLGVQA 134
           H E+VKE+NN      NL +EQ  TE+EQ W+GLE+LE+ G+LGEKRL  I DSD+GVQA
Sbjct: 538 HRENVKESNN------NLINEQAGTEEEQDWTGLEFLEVVGDLGEKRLGSITDSDVGVQA 597

Query: 135 KLERPKLEELFSN 148
           K E  +LEELFS+
Sbjct: 598 KTEGTELEELFSD 604

[Close]

BLAST of Lcy12g005590 vs. ExPASy TrEMBL
Match: A0A0A0KAX8 (O-fucosyltransferase family protein OS=Cucumis sativus OX=3659 GN=Csa_6G120430 PE=3 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 3.6e-10
Identity = 31/35 (88.57%), Postives = 34/35 (97.14%), Query Frame = 0


Query: 30  RFEPDMLAFSGCYYGGGEAEKEELGEIRKRWKSLH 65
           RFEPDMLAFSGCYYGGGE E++ELG+IRKRWKSLH
Sbjct: 307 RFEPDMLAFSGCYYGGGEIERQELGQIRKRWKSLH 341

HSP 2 Score: 82.0 bits (201), Expect = 2.2e-12
Identity = 44/73 (60.27%), Postives = 55/73 (75.34%), Query Frame = 0


Query: 75  HTEDVKETNNGCKETSNLTDEQTTTEDEQGWSGLEYLEIGGELGEKRLPIIIDSDLGVQA 134
           H ++VKE+NN      NL +EQ  TE+EQ W+GLE+LEI G+LGEKRL  I DSD+GVQA
Sbjct: 538 HRDNVKESNN------NLINEQARTEEEQDWTGLEFLEIVGDLGEKRLGSITDSDVGVQA 597

Query: 135 KLERPKLEELFSN 148
           K E  +LEELFS+
Sbjct: 598 KTEGTELEELFSD 604

[Close]

BLAST of Lcy12g005590 vs. NCBI nr
Match: XP_038901838.1 (protein ROOT HAIR SPECIFIC 17-like isoform X1 [Benincasa hispida])

HSP 1 Score: 103.2 bits (256), Expect = 1.9e-18
Identity = 53/73 (72.60%), Postives = 62/73 (84.93%), Query Frame = 0


Query: 75  HTEDVKETNNGCKETSNLTDEQTTTEDEQGWSGLEYLEIGGELGEKRLPIIIDSDLGVQA 134
           HT DVKE NNG KET+NL +EQT TED+Q WSGLE+LEIGG++GEKRL  + DSDLGVQA
Sbjct: 538 HT-DVKENNNGYKETNNLKNEQTATEDDQEWSGLEFLEIGGDVGEKRLGSLADSDLGVQA 597

Query: 135 KLERPKLEELFSN 148
           K E P+LEELFS+
Sbjct: 598 KPEGPELEELFSD 609

[Close]

BLAST of Lcy12g005590 vs. NCBI nr
Match: XP_038901838.1 (protein ROOT HAIR SPECIFIC 17-like isoform X1 [Benincasa hispida])

HSP 1 Score: 79.0 bits (193), Expect = 3.9e-11
Identity = 34/35 (97.14%), Postives = 35/35 (100.00%), Query Frame = 0


Query: 30  RFEPDMLAFSGCYYGGGEAEKEELGEIRKRWKSLH 65
           RFEPDMLAFSGCYYGGGEAE+EELGEIRKRWKSLH
Sbjct: 307 RFEPDMLAFSGCYYGGGEAEREELGEIRKRWKSLH 341

HSP 2 Score: 103.2 bits (256), Expect = 1.9e-18
Identity = 53/73 (72.60%), Postives = 62/73 (84.93%), Query Frame = 0


Query: 75  HTEDVKETNNGCKETSNLTDEQTTTEDEQGWSGLEYLEIGGELGEKRLPIIIDSDLGVQA 134
           HT DVKE NNG KET+NL +EQT TED+Q WSGLE+LEIGG++GEKRL  + DSDLGVQA
Sbjct: 516 HT-DVKENNNGYKETNNLKNEQTATEDDQEWSGLEFLEIGGDVGEKRLGSLADSDLGVQA 575

Query: 135 KLERPKLEELFSN 148
           K E P+LEELFS+
Sbjct: 576 KPEGPELEELFSD 587

[Close]

BLAST of Lcy12g005590 vs. NCBI nr
Match: XP_038901839.1 (protein ROOT HAIR SPECIFIC 17-like isoform X2 [Benincasa hispida])

HSP 1 Score: 79.0 bits (193), Expect = 3.9e-11
Identity = 34/35 (97.14%), Postives = 35/35 (100.00%), Query Frame = 0


Query: 30  RFEPDMLAFSGCYYGGGEAEKEELGEIRKRWKSLH 65
           RFEPDMLAFSGCYYGGGEAE+EELGEIRKRWKSLH
Sbjct: 285 RFEPDMLAFSGCYYGGGEAEREELGEIRKRWKSLH 319

HSP 2 Score: 100.9 bits (250), Expect = 9.6e-18
Identity = 49/73 (67.12%), Postives = 60/73 (82.19%), Query Frame = 0


Query: 75  HTEDVKETNNGCKETSNLTDEQTTTEDEQGWSGLEYLEIGGELGEKRLPIIIDSDLGVQA 134
           HTEDV E N+G  ETSN T EQT TED+Q W+GLEYL+IG +LGE+RL  +IDSDLGV+ 
Sbjct: 537 HTEDVNENNHGYNETSNSTKEQTATEDDQEWTGLEYLDIGNDLGERRLHTLIDSDLGVRP 596

Query: 135 KLERPKLEELFSN 148
           K E+P+LEELFS+
Sbjct: 597 KPEQPELEELFSD 609

[Close]

BLAST of Lcy12g005590 vs. NCBI nr
Match: XP_023532479.1 (protein ROOT HAIR SPECIFIC 17-like [Cucurbita pepo subsp. pepo] >XP_023532480.1 protein ROOT HAIR SPECIFIC 17-like [Cucurbita pepo subsp. pepo] >XP_023532481.1 protein ROOT HAIR SPECIFIC 17-like [Cucurbita pepo subsp. pepo] >XP_023532482.1 protein ROOT HAIR SPECIFIC 17-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 74.7 bits (182), Expect = 7.4e-10
Identity = 32/35 (91.43%), Postives = 34/35 (97.14%), Query Frame = 0


Query: 30  RFEPDMLAFSGCYYGGGEAEKEELGEIRKRWKSLH 65
           RFEPDMLAFSGCYYGGG+ EKEELG+IRKRWKSLH
Sbjct: 306 RFEPDMLAFSGCYYGGGKDEKEELGKIRKRWKSLH 340

HSP 2 Score: 99.0 bits (245), Expect = 3.7e-17
Identity = 48/73 (65.75%), Postives = 60/73 (82.19%), Query Frame = 0


Query: 75  HTEDVKETNNGCKETSNLTDEQTTTEDEQGWSGLEYLEIGGELGEKRLPIIIDSDLGVQA 134
           HTEDV E N+G  ETSN T EQT TED+Q W+GLEYL+IG +LGE+RL  +I+SDLGV+ 
Sbjct: 537 HTEDVNENNHGYNETSNSTKEQTATEDDQEWTGLEYLDIGNDLGERRLHTLINSDLGVRP 596

Query: 135 KLERPKLEELFSN 148
           K E+P+LEELFS+
Sbjct: 597 KPEQPELEELFSD 609

[Close]

BLAST of Lcy12g005590 vs. NCBI nr
Match: XP_022947707.1 (protein ROOT HAIR SPECIFIC 17-like [Cucurbita moschata] >XP_022947708.1 protein ROOT HAIR SPECIFIC 17-like [Cucurbita moschata] >XP_022947709.1 protein ROOT HAIR SPECIFIC 17-like [Cucurbita moschata] >XP_022947710.1 protein ROOT HAIR SPECIFIC 17-like [Cucurbita moschata])

HSP 1 Score: 75.1 bits (183), Expect = 5.6e-10
Identity = 32/35 (91.43%), Postives = 34/35 (97.14%), Query Frame = 0


Query: 30  RFEPDMLAFSGCYYGGGEAEKEELGEIRKRWKSLH 65
           RFEPDMLAFSGCYYGGG+ EKEELG+IRKRWKSLH
Sbjct: 306 RFEPDMLAFSGCYYGGGQDEKEELGKIRKRWKSLH 340

HSP 2 Score: 97.8 bits (242), Expect = 8.1e-17
Identity = 48/73 (65.75%), Postives = 59/73 (80.82%), Query Frame = 0


Query: 75  HTEDVKETNNGCKETSNLTDEQTTTEDEQGWSGLEYLEIGGELGEKRLPIIIDSDLGVQA 134
           HTEDV E N+   ETSN T EQT TED+Q W+GLEYL+IG +LGE+RL  +I+SDLGVQ 
Sbjct: 537 HTEDVNENNHDYNETSNSTKEQTVTEDDQEWTGLEYLDIGNDLGERRLHTLINSDLGVQP 596

Query: 135 KLERPKLEELFSN 148
           K E+P+LEELFS+
Sbjct: 597 KPEQPELEELFSD 609

[Close]

BLAST of Lcy12g005590 vs. TAIR 10
Match: AT1G20550.1 (O-fucosyltransferase family protein )

HSP 1 Score: 73.9 bits (180), Expect = 1.2e-13
Identity = 31/36 (86.11%), Postives = 34/36 (94.44%), Query Frame = 0


Query: 30  RFEPDMLAFSGCYYGGGEAEKEELGEIRKRWKSLHV 66
           RFEPDMLAFSGCYYGGGE EK+ELG IR+RWK+LHV
Sbjct: 279 RFEPDMLAFSGCYYGGGEKEKKELGTIRRRWKTLHV 314

[Close]

BLAST of Lcy12g005590 vs. TAIR 10
Match: AT1G76270.1 (O-fucosyltransferase family protein )

HSP 1 Score: 67.4 bits (163), Expect = 1.1e-11
Identity = 26/36 (72.22%), Postives = 32/36 (88.89%), Query Frame = 0


Query: 30  RFEPDMLAFSGCYYGGGEAEKEELGEIRKRWKSLHV 66
           R+EPDMLAFSGCYYGGG+ E+ EL  IR+RWK+LH+
Sbjct: 276 RYEPDMLAFSGCYYGGGDKERRELAAIRRRWKTLHI 311

[Close]

BLAST of Lcy12g005590 vs. TAIR 10
Match: AT4G38390.1 (root hair specific 17 )

HSP 1 Score: 67.0 bits (162), Expect = 1.4e-11
Identity = 27/35 (77.14%), Postives = 32/35 (91.43%), Query Frame = 0


Query: 30  RFEPDMLAFSGCYYGGGEAEKEELGEIRKRWKSLH 65
           RFEPDMLAFSGCYYGGG+ E+ ELG +R+RWK+LH
Sbjct: 295 RFEPDMLAFSGCYYGGGQKERLELGAMRRRWKTLH 329

HSP 2 Score: 39.7 bits (91), Expect = 2.4e-03
Identity = 21/28 (75.00%), Postives = 22/28 (78.57%), Query Frame = 0


Query: 6   VAPYILNVTLVVPKLDQNSFRKD-SRFE 33
           VA YILN TLVVPKLDQ S+ KD S FE
Sbjct: 147 VAAYILNATLVVPKLDQKSYWKDTSNFE 174

[Close]

BLAST of Lcy12g005590 vs. TAIR 10
Match: AT4G16650.1 (O-fucosyltransferase family protein )

HSP 1 Score: 60.8 bits (146), Expect = 1.0e-09
Identity = 26/34 (76.47%), Postives = 29/34 (85.29%), Query Frame = 0


Query: 30  RFEPDMLAFSGCYYGGGEAEKEELGEIRKRWKSL 64
           RFEPDMLAFSGC +GGGE E+ EL EIRKRW +L
Sbjct: 294 RFEPDMLAFSGCDFGGGEKERAELAEIRKRWDTL 327

The following BLAST results are available for this feature:

BLAST of Lcy12g005590 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4HSU3	1.6e-12	86.11	O-fucosyltransferase 6 OS=Arabidopsis thaliana OX=3702 GN=OFUT6 PE=2 SV=1	[more]
Q949U4	1.5e-10	72.22	O-fucosyltransferase 16 OS=Arabidopsis thaliana OX=3702 GN=OFUT16 PE=2 SV=1	[more]
Q9SVE6	2.0e-10	77.14	Protein ROOT HAIR SPECIFIC 17 OS=Arabidopsis thaliana OX=3702 GN=RHS17 PE=2 SV=1	[more]
Q8LPF8	1.4e-08	76.47	O-fucosyltransferase 29 OS=Arabidopsis thaliana OX=3702 GN=OFUT29 PE=2 SV=1	[more]

BLAST of Lcy12g005590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G7C7	1.8e-17	65.75	O-fucosyltransferase family protein OS=Cucurbita moschata OX=3662 GN=LOC11145149...	[more]
A0A6J1G7C7	2.7e-10	91.43	O-fucosyltransferase family protein OS=Cucurbita moschata OX=3662 GN=LOC11145149...	[more]
A0A6J1I0N0	3.6e-10	91.43	O-fucosyltransferase family protein OS=Cucurbita maxima OX=3661 GN=LOC111469776 ...	[more]
A0A0A0KAX8	1.7e-12	60.27	O-fucosyltransferase family protein OS=Cucumis sativus OX=3659 GN=Csa_6G120430 P...	[more]
A0A0A0KAX8	3.6e-10	88.57	O-fucosyltransferase family protein OS=Cucumis sativus OX=3659 GN=Csa_6G120430 P...	[more]

Pages

BLAST of Lcy12g005590 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038901838.1	1.9e-18	72.60	protein ROOT HAIR SPECIFIC 17-like isoform X1 [Benincasa hispida]	[more]
XP_038901838.1	3.9e-11	97.14	protein ROOT HAIR SPECIFIC 17-like isoform X1 [Benincasa hispida]	[more]
XP_038901839.1	3.9e-11	97.14	protein ROOT HAIR SPECIFIC 17-like isoform X2 [Benincasa hispida]	[more]
XP_023532479.1	7.4e-10	91.43	protein ROOT HAIR SPECIFIC 17-like [Cucurbita pepo subsp. pepo] >XP_023532480.1 ...	[more]
XP_022947707.1	5.6e-10	91.43	protein ROOT HAIR SPECIFIC 17-like [Cucurbita moschata] >XP_022947708.1 protein ...	[more]

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BLAST of Lcy12g005590 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G20550.1	1.2e-13	86.11	O-fucosyltransferase family protein	[more]
AT1G76270.1	1.1e-11	72.22	O-fucosyltransferase family protein	[more]
AT4G38390.1	1.4e-11	77.14	root hair specific 17	[more]
AT4G16650.1	1.0e-09	76.47	O-fucosyltransferase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..103
None	No IPR available	PANTHER	PTHR31818:SF16	PROTEIN ROOT HAIR SPECIFIC 17	coord: 6..29
None	No IPR available	PANTHER	PTHR31818	O-FUCOSYLTRANSFERASE 16	coord: 6..29
None	No IPR available	PANTHER	PTHR31818:SF16	PROTEIN ROOT HAIR SPECIFIC 17	coord: 30..65
None	No IPR available	PANTHER	PTHR31818	O-FUCOSYLTRANSFERASE 16	coord: 30..65

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy12g005590.1	Lcy12g005590.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006004	fucose metabolic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016757	glycosyltransferase activity