Lcy12g005010 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy12g005010
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Unknown protein
Location	Chr12: 19036497 .. 19038686 (-)
RNA-Seq Expression	Lcy12g005010
Synteny	Lcy12g005010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTGCAATTTTTATGGCTGAAATTTTCTCTCAAGTATATTTTTTCATCTCCCTGTTTAAGCTTGAACCTTACAAGCTTTATCTCTCAAATTCCATCACGATAGGCTCCCACAAGTCATTCTAAGACCGGAGGATAGCGGGGAAGACTCTCGTGATCGTCTACAAACGGTTCGTGATCCATAAACACTAATGGTGCAGCTCAATTTCATGTTTAAAGGTTGGTAATAAATAGACTCTGTTTTTCGATTAGTTTGATACATGCTTTTAATTCTAAAATGAATTAAGATTGAGAGGTTTTCGATCCAAATCGCTTCTGCTCGGGTGTTGAACACTCCTTCACTCACGGTGGGCTTCAAGCAGAAACCATGGCCGCCGAAAATGGGTCTCAAACCAACGATTTCGATAGTCGACCGATGGAGATCTCGCTGGCGATGATGGAGGACGTTGCAATCTCATTAATGGAGAGTATTCCGAACGTAAATGTTGATAAATTCAGTCTTAATGGTCCGAAATCATCAAAGGCGAAAAAGAAACTTGATTATGGCGACCTTAAAATCGGGGATTACCAGGTGCAATCGAGCGGCGGAATTCACGGGACTGGAGAAACGGAAGGGATGCGGTCGGTTATGGATGAAAATTTAATGTTTCAGAGTCATCAAACAGCCTCTTTGTCCAATGGGCCTGCAACTTATCCAGCCCACTACTTTGGGTTTGCTGAAGGATCTATTTCCTTGGGCCAAGAAATACCGGTGGACTCTACGGCTCAGCAAAGAGACTTCAAACTTAGTCCGACTGGCGTCCTAATCAGTGGAGATGGATCTGACCCACATTCGCAAGAAACTCAGGCCCAACATACTGAACAAGGTCCAAAGATTAAAGGCTGGAAACAACATGCTAGGAAGATGGTTTTGGGCCCAATGATTCCGGAAACGAAATGGACTGCTTCAGCGTGCAATATTAATAAATAAAGTTGTCTTTGAATTACAAAGGTTGCTTTGTAGTGGATTGTAATAGCAGAAGTGGTGGTTTATGCTTACTATGGAATGAAGAAGTGGATGTTACCGTCAGATCTTTTACGAATTTTCACATTGATGCGGCAGTTAAATGGCAATCCAAAATGTGGAGATTCTCTAGCGTGTATGGCAATCCTAATGCAAGTCAACGAAAATACACTTGGGATTTAATTAGGTGTCTACATAATCAAGATGAATCGGCTTAGCTAATTGGTGGTGATCTCAATGCTACTTTTTTAATTGAGGAAAAGGAGGGAGGTGCTCCTACTAGAGAATCCATATTAGCAAGTTTTAGAAGTGTATTGGATGAATGTAATCTGAGGGACTTTGAGTACAGAGGAGATATTTTCACGTGGTCCAACAGGCAAAAAGACTTAGGACCAAATAAATGAATGGTTAGACCGTTTCATTGCCAATGAAGCTTTTTGGAGCTCATTTCCTAATATGTCTGTTACACACCTGGATTGGGCAAGATCTAACCATCGCCCAATTTTACTTGATGTGATTCCTTCAATGGGGTCGGAATGAAAGTGCCACAAGCGTCAAAAGGTTTTTCGATTTGAAGAAATCTGGGCTCAACAACCAGAATGTCAAAACATTATTGATGGTGAAGGGTGTTGGAAGGTTCGATCATCGGGGGATCCACGTCTGGAAGCTTGTCTCACAAAATGCAGATTGTGGTTGCAAAAATGGGGCAAAGGTACGATTTCTAACATTCAAAGAGATATCTCTAGCTTACAGGCAAAATTACAAGACCTGTACAGAAGGCCATTGCCTTGGGACTTTGATACGATTAAAACGGTCGAAAATCAATTAGACAAAGTATTAGAGGAGGAGGAAAAATACTGGAAACAGAGATCCAGGGAAAATTGGCTACAATGGGGTGATCAGAACACGAGATGGTTTCACTCTCGTGCTACATTCAGAAGACGACAAAATGAAATTAGTGGTATTGAAAATGAGGATGGTGTTTGGATATCTGAACGACAACAGTTGGAGCGGGCTTTTCATTCATATTTTGAAAAAAAATTCTCCTCTGCTAACTGTTGGGTTTCCAGAGTGGGTAAAAATAAGATATAAAAAGACTCTAGAACTCTGTGCAAGTATACACAATCCGCAGCAAGTAATAAGTATTTATCGAATCCAGGGTCTGAATTAGTTTTCACTTTATCTATTTT

mRNA sequence

CGTGCAATTTTTATGGCTGAAATTTTCTCTCAAGTATATTTTTTCATCTCCCTGTTTAAGCTTGAACCTTACAAGCTTTATCTCTCAAATTCCATCACGATAGGCTCCCACAAGTCATTCTAAGACCGGAGGATAGCGGGGAAGACTCTCGTGATCGTCTACAAACGGTTCGTGATCCATAAACACTAATGGTGCAGCTCAATTTCATGTTTAAAGATTGAGAGGTTTTCGATCCAAATCGCTTCTGCTCGGGTGTTGAACACTCCTTCACTCACGGTGGGCTTCAAGCAGAAACCATGGCCGCCGAAAATGGGTCTCAAACCAACGATTTCGATAGTCGACCGATGGAGATCTCGCTGGCGATGATGGAGGACGTTGCAATCTCATTAATGGAGAGTATTCCGAACGTAAATGTTGATAAATTCAGTCTTAATGGTCCGAAATCATCAAAGGCGAAAAAGAAACTTGATTATGGCGACCTTAAAATCGGGGATTACCAGGTGCAATCGAGCGGCGGAATTCACGGGACTGGAGAAACGGAAGGGATGCGGTCGGTTATGGATGAAAATTTAATGTTTCAGAGTCATCAAACAGCCTCTTTGTCCAATGGGCCTGCAACTTATCCAGCCCACTACTTTGGGTTTGCTGAAGGATCTATTTCCTTGGGCCAAGAAATACCGGTGGACTCTACGGCTCAGCAAAGAGACTTCAAACTTAGTCCGACTGGCGTCCTAATCAGTGGAGATGGATCTGACCCACATTCGCAAGAAACTCAGGCCCAACATACTGAACAAGGTCCAAAGATTAAAGGCTGGAAACAACATGCTAGGAAGATGGTTTTGGGCCCAATGATTCCGGAAACGAAATGGACTGCTTCAGCGTGCAATATTAATAAATAAAGTTGTCTTTGAATTACAAAGGTTGCTTTGTAGTGGATTGTAATAGCAGAAGTGGTGGTTTATGCTTACTATGGAATGAAGAAGTGGATGTTACCGTCAGATCTTTTACGAATTTTCACATTGATGCGGCAGTTAAATGGCAATCCAAAATGTGGAGATTCTCTAGCGTGTATGGCAATCCTAATGCAAGTCAACGAAAATACACTTGGGATTTAATTAGGTGTCTACATAATCAAGATGAATCGGCTTAGCTAATTGGTGGTGATCTCAATGCTACTTTTTTAATTGAGGAAAAGGAGGGAGGTGCTCCTACTAGAGAATCCATATTAGCAAGTTTTAGAAGTGTATTGGATGAATGTAATCTGAGGGACTTTGAGTACAGAGGAGATATTTTCACGTGGTCCAACAGGCAAAAAGACTTAGGACCAAATAAATGAATGGTTAGACCGTTTCATTGCCAATGAAGCTTTTTGGAGCTCATTTCCTAATATGTCTGTTACACACCTGGATTGGGCAAGATCTAACCATCGCCCAATTTTACTTGATGTGATTCCTTCAATGGGGTCGGAATGAAAGTGCCACAAGCGTCAAAAGGTTTTTCGATTTGAAGAAATCTGGGCTCAACAACCAGAATGTCAAAACATTATTGATGGTGAAGGGTGTTGGAAGGTTCGATCATCGGGGGATCCACGTCTGGAAGCTTGTCTCACAAAATGCAGATTGTGGTTGCAAAAATGGGGCAAAGGTACGATTTCTAACATTCAAAGAGATATCTCTAGCTTACAGGCAAAATTACAAGACCTGTACAGAAGGCCATTGCCTTGGGACTTTGATACGATTAAAACGGTCGAAAATCAATTAGACAAAGTATTAGAGGAGGAGGAAAAATACTGGAAACAGAGATCCAGGGAAAATTGGCTACAATGGGGTGATCAGAACACGAGATGGTTTCACTCTCGTGCTACATTCAGAAGACGACAAAATGAAATTAGTGGTATTGAAAATGAGGATGGTGTTTGGATATCTGAACGACAACAGTTGGAGCGGGCTTTTCATTCATATTTTGAAAAAAAATTCTCCTCTGCTAACTGTTGGGTTTCCAGAGTGGGTAAAAATAAGATATAAAAAGACTCTAGAACTCTGTGCAAGTATACACAATCCGCAGCAAGTAATAAGTATTTATCGAATCCAGGGTCTGAATTAGTTTTCACTTTATCTATTTT

Coding sequence (CDS)

ATGGCCGCCGAAAATGGGTCTCAAACCAACGATTTCGATAGTCGACCGATGGAGATCTCGCTGGCGATGATGGAGGACGTTGCAATCTCATTAATGGAGAGTATTCCGAACGTAAATGTTGATAAATTCAGTCTTAATGGTCCGAAATCATCAAAGGCGAAAAAGAAACTTGATTATGGCGACCTTAAAATCGGGGATTACCAGGTGCAATCGAGCGGCGGAATTCACGGGACTGGAGAAACGGAAGGGATGCGGTCGGTTATGGATGAAAATTTAATGTTTCAGAGTCATCAAACAGCCTCTTTGTCCAATGGGCCTGCAACTTATCCAGCCCACTACTTTGGGTTTGCTGAAGGATCTATTTCCTTGGGCCAAGAAATACCGGTGGACTCTACGGCTCAGCAAAGAGACTTCAAACTTAGTCCGACTGGCGTCCTAATCAGTGGAGATGGATCTGACCCACATTCGCAAGAAACTCAGGCCCAACATACTGAACAAGGTCCAAAGATTAAAGGCTGGAAACAACATGCTAGGAAGATGGTTTTGGGCCCAATGATTCCGGAAACGAAATGGACTGCTTCAGCGTGCAATATTAATAAATAA

Protein sequence

MAAENGSQTNDFDSRPMEISLAMMEDVAISLMESIPNVNVDKFSLNGPKSSKAKKKLDYGDLKIGDYQVQSSGGIHGTGETEGMRSVMDENLMFQSHQTASLSNGPATYPAHYFGFAEGSISLGQEIPVDSTAQQRDFKLSPTGVLISGDGSDPHSQETQAQHTEQGPKIKGWKQHARKMVLGPMIPETKWTASACNINK

Homology

The following BLAST results are available for this feature:

BLAST of Lcy12g005010 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy12g005010 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy12g005010 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy12g005010 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 150..166
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 145..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy12g005010.1	Lcy12g005010.1	mRNA