Homology
BLAST of Lcy12g004580 vs. ExPASy Swiss-Prot
Match:
P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)
HSP 1 Score: 124.0 bits (310), Expect = 2.9e-27
Identity = 73/274 (26.64%), Postives = 130/274 (47.45%), Query Frame = 0
Query: 21 RNRKEDFKGVKQRVWQTLQGWKGKFFSMGGKEVLIKSVAQAIPTYIMSCFRLPSTLCDDL 80
R K+ F + +RV + GW+ K S G+ L K+V ++P + MS LP ++ + L
Sbjct: 7 RINKDTFGEILERVSSRMSGWREKTLSFAGRLTLTKAVLSSMPVHSMSTILLPQSILNRL 66
Query: 81 HKMMARFWWGTTEMKKKIHWKRWDLMCTPKEVGGLNSGDLKGFNRALLAKQVWRIFTSPS 140
++ F WG+T KKK H +W +C+PK+ GGL K NRAL++K WR+ +
Sbjct: 67 DQLSRTFLWGSTAEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISKVGWRLLQEKN 126
Query: 141 ILVSKVIKGPYAYNMSVLDAP---VKSNCSVFWRGF-VWAHGLFFNGMRKQVGNGTSIKF 200
L + V++ Y + D+ K + S WR + + +G+ G+G I+F
Sbjct: 127 SLWTLVLQKKYHVG-EIRDSRWLIPKGSWSSTWRSIAIGLRDVVSHGVGWIPGDGQQIRF 186
Query: 201 FHDPWIPKDNTFKPLRIDHSITNDNLLVADLITPSKEWNVQKLKELVSEVDANIISAIPI 260
+ D W+ + + D ++ DL P + W+ K+ + + A+ +
Sbjct: 187 WTDRWVSGKPLLELDNGERPTDCDTVVAKDLWIPGRGWDFAKIDPYTTNNTRLELRAVVL 246
Query: 261 SL-GNDEDRWIWHYSKNGKYPVKIGYTVAIMSNV 290
L DR W +S++G++ V+ Y + + V
Sbjct: 247 DLVTGARDRLSWKFSQDGQFSVRSAYEMLTVDEV 279
BLAST of Lcy12g004580 vs. ExPASy Swiss-Prot
Match:
P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1)
HSP 1 Score: 121.7 bits (304), Expect = 1.4e-26
Identity = 59/152 (38.82%), Postives = 82/152 (53.95%), Query Frame = 0
Query: 61 AIPTYIMSCFRLPSTLCDDLHKMMARFWWGTTEMKKKIHWKRWDLMCTPKE-VGGLNSGD 120
A+P Y MSCFRL LC L M FWW + E K+KI W W +C KE GGL D
Sbjct: 2 ALPVYAMSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRD 61
Query: 121 LKGFNRALLAKQVWRIFTSPSILVSKVIKGPYAYNMSVLDAPVKSNCSVFWRGFVWAHGL 180
L FN+ALLAKQ +RI P L+S++++ Y + S+++ V + S WR + L
Sbjct: 62 LGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGREL 121
Query: 181 FFNGMRKQVGNGTSIKFFHDPWIPKDNTFKPL 212
G+ + +G+G K + D WI + PL
Sbjct: 122 LSRGLLRTIGDGIHTKVWLDRWIMDETPLPPL 153
BLAST of Lcy12g004580 vs. ExPASy TrEMBL
Match:
A0A803PM68 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 299.3 bits (765), Expect = 1.9e-77
Identity = 136/307 (44.30%), Postives = 188/307 (61.24%), Query Frame = 0
Query: 1 MGMQVVDNLGRYLGVSSSFSRNRKEDFKGVKQRVWQTLQGWKGKFFSMGGKEVLIKSVAQ 60
MG++VVDN G+YLG+ S R +K+ F+ +K +VW L+GWKG FFS GKE+LIK++ Q
Sbjct: 79 MGVKVVDNYGKYLGLPSFVGRTKKQHFEFIKTKVWNKLKGWKGSFFSAAGKEILIKAIVQ 138
Query: 61 AIPTYIMSCFRLPSTLCDDLHKMMARFWWGTTEMKKKIHWKRWDLMCTPKEVGGLNSGDL 120
AIPTY MSCFRLP + +H M ARFWWG++E KIHW +W +C KE GGL DL
Sbjct: 139 AIPTYTMSCFRLPKKTINSIHSMAARFWWGSSEKDAKIHWCKWSTLCKHKEQGGLGFRDL 198
Query: 121 KGFNRALLAKQVWRIFTSPSILVSKVIKGPYAYNMSVLDAPVKSNCSVFWRGFVWAHGLF 180
FN+ALLAKQ+WR P+ L SKV+K Y N+ VL+A ++ S WR VW +
Sbjct: 199 GLFNQALLAKQIWRCIRYPNSLCSKVLKASYFPNVGVLEAKSGNHASFVWRSLVWGKKII 258
Query: 181 FNGMRKQVGNGTSIKFFHDPWIPKDNTFKPLRIDHSITNDNLLVADLITPSKEWNVQKLK 240
G R ++GNG S++ DPW+P+ TFK D + + V DL+ + EW+ + ++
Sbjct: 259 QKGYRWRIGNGNSVRVLEDPWLPRPVTFKV--YDKPSLPEGMYVVDLMKGNGEWDEEFIR 318
Query: 241 ELVSEVDANIISAIPISLGNDEDRWIWHYSKNGKYPVKIGYTVAIMSNVDIASSSVNILK 300
+ DA +I +P S ED+ +WHYSKNG+Y V+ GY +A V S+ +
Sbjct: 319 AFFNPTDAELILGMPTSEWEIEDKILWHYSKNGEYSVRSGYRMAAALQVHDIQSNTEATE 378
Query: 301 NWWGTLW 308
WW LW
Sbjct: 379 RWWRLLW 383
BLAST of Lcy12g004580 vs. ExPASy TrEMBL
Match:
A0A803QJV0 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 293.1 bits (749), Expect = 1.3e-75
Identity = 137/307 (44.63%), Postives = 186/307 (60.59%), Query Frame = 0
Query: 1 MGMQVVDNLGRYLGVSSSFSRNRKEDFKGVKQRVWQTLQGWKGKFFSMGGKEVLIKSVAQ 60
+G++VVDN G+YLG+ S RN+K+ F +K RVW +L+GWKG FSMGG EVLIK++ Q
Sbjct: 1177 LGVKVVDNHGKYLGLLSLVGRNKKQVFDVIKNRVWNSLRGWKGHMFSMGGNEVLIKAIVQ 1236
Query: 61 AIPTYIMSCFRLPSTLCDDLHKMMARFWWGTTEMKKKIHWKRWDLMCTPKEVGGLNSGDL 120
AIP Y MS +RL + +H+M ARFWWG+T KKKIHW +W +C PKE GGL DL
Sbjct: 1237 AIPAYTMSFYRLTKSTITSIHRMAARFWWGSTAKKKKIHWCKWKYLCRPKEEGGLGFRDL 1296
Query: 121 KGFNRALLAKQVWRIFTSPSILVSKVIKGPYAYNMSVLDAPVKSNCSVFWRGFVWAHGLF 180
+ FN+ALLAKQ+WR P L +KV+K Y N SVL A ++ S WR VW +
Sbjct: 1297 ELFNQALLAKQIWRCLRQPGSLCTKVLKASYFPNKSVLAAKCGAHASFVWRSLVWGKEII 1356
Query: 181 FNGMRKQVGNGTSIKFFHDPWIPKDNTFKPLRIDHSITNDNLLVADLITPSKEWNVQKLK 240
G R +VGNG ++ DPW+P+ +FK D L V DL PS W+ ++
Sbjct: 1357 LKGYRWRVGNGQQVRVLEDPWLPRPTSFKV--YDKPPFPQQLCVVDLTHPSGVWDESFIR 1416
Query: 241 ELVSEVDANIISAIPISLGNDEDRWIWHYSKNGKYPVKIGYTVAIMSNVDIASSSVNILK 300
+ DA +I +P ED+ +WHYS+NG+Y V+ GY +A A+S ++K
Sbjct: 1417 ANFNHEDAEMILRLPPLHEGLEDKVMWHYSRNGEYTVRSGYRMAAEMRKSEATSEGQLMK 1476
Query: 301 NWWGTLW 308
+WW LW
Sbjct: 1477 DWWSKLW 1481
BLAST of Lcy12g004580 vs. ExPASy TrEMBL
Match:
A0A803NHG3 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 292.4 bits (747), Expect = 2.3e-75
Identity = 137/307 (44.63%), Postives = 187/307 (60.91%), Query Frame = 0
Query: 1 MGMQVVDNLGRYLGVSSSFSRNRKEDFKGVKQRVWQTLQGWKGKFFSMGGKEVLIKSVAQ 60
+G++VVDN G+YLG+ S RN+K+ F +K RVW L+GWKG FSMG KEVLIK++ Q
Sbjct: 1177 LGVKVVDNHGKYLGLLSLVGRNKKQVFDVIKNRVWNRLRGWKGHMFSMGVKEVLIKAIVQ 1236
Query: 61 AIPTYIMSCFRLPSTLCDDLHKMMARFWWGTTEMKKKIHWKRWDLMCTPKEVGGLNSGDL 120
AIP Y MSC+RL + +H+M ARFWWG+T KKKIHW +W+ +C PKE GGL DL
Sbjct: 1237 AIPAYTMSCYRLTKSTITSIHRMAARFWWGSTAKKKKIHWCKWEYLCRPKEEGGLGFRDL 1296
Query: 121 KGFNRALLAKQVWRIFTSPSILVSKVIKGPYAYNMSVLDAPVKSNCSVFWRGFVWAHGLF 180
+ FN+ALLAKQ+WR P L SKV+K Y + SVL A ++ S WR VW +
Sbjct: 1297 ELFNQALLAKQIWRCLRQPGSLCSKVLKASYFPHKSVLAAKCGAHASFVWRSLVWGKEII 1356
Query: 181 FNGMRKQVGNGTSIKFFHDPWIPKDNTFKPLRIDHSITNDNLLVADLITPSKEWNVQKLK 240
G R +VGNG ++ DPW+P+ +FK D L V DL PS W+ ++
Sbjct: 1357 LKGYRWRVGNGQQVRVLEDPWLPRPTSFKV--YDKPPFPQQLCVVDLTHPSGVWDESFIR 1416
Query: 241 ELVSEVDANIISAIPISLGNDEDRWIWHYSKNGKYPVKIGYTVAIMSNVDIASSSVNILK 300
+ DA +I +P + ED+ +WHYS+NG+Y V+ GY +A A+ ++K
Sbjct: 1417 ANFNREDAEMILRLPPLHEDLEDKVMWHYSRNGEYTVRSGYRMAAEIRKSEATLEGQLMK 1476
Query: 301 NWWGTLW 308
+WW LW
Sbjct: 1477 DWWRKLW 1481
BLAST of Lcy12g004580 vs. ExPASy TrEMBL
Match:
A0A803PV25 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 288.9 bits (738), Expect = 2.5e-74
Identity = 137/307 (44.63%), Postives = 188/307 (61.24%), Query Frame = 0
Query: 1 MGMQVVDNLGRYLGVSSSFSRNRKEDFKGVKQRVWQTLQGWKGKFFSMGGKEVLIKSVAQ 60
MG++VVDN G+YLG+ S R +K+ F+ + +VW L+GWKG FFS GKEVLIK++ Q
Sbjct: 1294 MGVKVVDNYGKYLGLPSFVGRTKKQHFEFI-NKVWNKLKGWKGSFFSAAGKEVLIKAIVQ 1353
Query: 61 AIPTYIMSCFRLPSTLCDDLHKMMARFWWGTTEMKKKIHWKRWDLMCTPKEVGGLNSGDL 120
AIPTY MSCFRLP + +H M ARFWWG++E KIHW +W ++C KE GGL DL
Sbjct: 1354 AIPTYTMSCFRLPKKTINSIHSMAARFWWGSSEKDAKIHWCKWSVLCKHKEQGGLGFRDL 1413
Query: 121 KGFNRALLAKQVWRIFTSPSILVSKVIKGPYAYNMSVLDAPVKSNCSVFWRGFVWAHGLF 180
FN+ALLAKQ+WR P+ L SKV+K Y N+ VL+A ++ S WR VW +
Sbjct: 1414 GLFNQALLAKQIWRCIRYPNSLCSKVLKASYYPNVGVLEAKCGNHASFVWRSLVWGKKII 1473
Query: 181 FNGMRKQVGNGTSIKFFHDPWIPKDNTFKPLRIDHSITNDNLLVADLITPSKEWNVQKLK 240
G R ++GNG S++ DPW+P+ TFK D DNL V DL + EW+ + ++
Sbjct: 1474 QAGYRWRIGNGNSVRVLDDPWLPRPVTFK--IYDKPPLPDNLHVIDLKKGNGEWDEEFVR 1533
Query: 241 ELVSEVDANIISAIPISLGNDEDRWIWHYSKNGKYPVKIGYTVAIMSNVDIASSSVNILK 300
+ + DA +I + S + ED+ +WHYSK+G+Y V+ GY +A V S+
Sbjct: 1534 AVFNPTDAELILQMATSECDIEDKILWHYSKDGEYSVRSGYRMAAALEVRDIQSNTEATN 1593
Query: 301 NWWGTLW 308
WW LW
Sbjct: 1594 RWWRQLW 1597
BLAST of Lcy12g004580 vs. ExPASy TrEMBL
Match:
A0A803PIB6 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 287.7 bits (735), Expect = 5.6e-74
Identity = 135/309 (43.69%), Postives = 186/309 (60.19%), Query Frame = 0
Query: 1 MGMQVVDNLGRYLGVSSSFSRNRKEDFKGVKQRVWQTLQGWKGKFFSMGGKEVLIKSVAQ 60
+GM + YLG+ + R++ + F +K+R+W+ + W K FS+GGKEVL+K+V Q
Sbjct: 1213 LGMPICACHESYLGLPAYSERDKSQLFNNIKERIWKLMHAWSDKIFSIGGKEVLLKAVVQ 1272
Query: 61 AIPTYIMSCFRLPSTLCDDLHKMMARFWWGTTEMKKKIHWKRWDLMCTPKEVGGLNSGDL 120
AIPTY MSCFRL + C + MMARFWWG++ KKIHWK W +CT K GGL
Sbjct: 1273 AIPTYAMSCFRLSAKFCKQIETMMARFWWGSSTDNKKIHWKNWKSLCTSKRDGGLGFRSF 1332
Query: 121 KGFNRALLAKQVWRIFTSPSILVSKVIKGPYAYNMSVLDAPVKSNCSVFWRGFVWAHGLF 180
FN+A LAKQ WRIF +P+ L+S+V+KG Y + + A V S+ W+G VW L
Sbjct: 1333 VHFNQAFLAKQAWRIFQTPNSLLSRVLKGRYYHQNDFMTAKVSGLSSLTWQGIVWGRELL 1392
Query: 181 FNGMRKQVGNGTSIKFFHDPWIPKDNTFKPLRIDHSITNDNLLVADLITPSKEWNVQKLK 240
G+ ++G+GT + HD WIP + FKPLR S +N LVAD IT ++EW+++ L
Sbjct: 1393 SKGLIIKIGDGTGVNCAHDSWIPGNEYFKPLRFTGSCSN---LVADYITDTREWDLELLH 1452
Query: 241 ELVSEVDANIISAIPISLGNDEDRWIWHYSKNGKYPVKIGYTVAI-MSNVDIASSSVNIL 300
S D + I IP+S + DRW WHY +G Y VK GY +A + N D +SSS +
Sbjct: 1453 NDFSPADIDRILTIPLSYNSTRDRWRWHYDSSGDYTVKSGYNLACSLENKDHSSSSTS-Q 1512
Query: 301 KNWWGTLWG 309
+ WW WG
Sbjct: 1513 EAWWQLFWG 1517
BLAST of Lcy12g004580 vs. NCBI nr
Match:
XP_030497600.1 (uncharacterized protein LOC115713257 [Cannabis sativa])
HSP 1 Score: 287.7 bits (735), Expect = 1.2e-73
Identity = 135/309 (43.69%), Postives = 186/309 (60.19%), Query Frame = 0
Query: 1 MGMQVVDNLGRYLGVSSSFSRNRKEDFKGVKQRVWQTLQGWKGKFFSMGGKEVLIKSVAQ 60
+GM + YLG+ + R++ + F +K+R+W+ + W K FS+GGKEVL+K+V Q
Sbjct: 753 LGMPICACHESYLGLPAYSERDKSQLFNNIKERIWKLMHAWSDKIFSIGGKEVLLKAVVQ 812
Query: 61 AIPTYIMSCFRLPSTLCDDLHKMMARFWWGTTEMKKKIHWKRWDLMCTPKEVGGLNSGDL 120
AIPTY MSCFRL + C + MMARFWWG++ KKIHWK W +CT K GGL
Sbjct: 813 AIPTYAMSCFRLSAKFCKQIETMMARFWWGSSTDNKKIHWKNWKSLCTSKRDGGLGFRSF 872
Query: 121 KGFNRALLAKQVWRIFTSPSILVSKVIKGPYAYNMSVLDAPVKSNCSVFWRGFVWAHGLF 180
FN+A LAKQ WRIF +P+ L+S+V+KG Y + + A V S+ W+G VW L
Sbjct: 873 VHFNQAFLAKQAWRIFQTPNSLLSRVLKGRYYHQNDFMTAKVSGLSSLTWQGIVWGRELL 932
Query: 181 FNGMRKQVGNGTSIKFFHDPWIPKDNTFKPLRIDHSITNDNLLVADLITPSKEWNVQKLK 240
G+ ++G+GT + HD WIP + FKPLR S +N LVAD IT ++EW+++ L
Sbjct: 933 SKGLIIKIGDGTGVNCAHDSWIPGNEYFKPLRFTGSCSN---LVADYITDTREWDLELLH 992
Query: 241 ELVSEVDANIISAIPISLGNDEDRWIWHYSKNGKYPVKIGYTVAI-MSNVDIASSSVNIL 300
S D + I IP+S + DRW WHY +G Y VK GY +A + N D +SSS +
Sbjct: 993 NDFSPADIDRILTIPLSYNSTRDRWRWHYDSSGDYTVKSGYNLACSLENKDHSSSSTS-Q 1052
Query: 301 KNWWGTLWG 309
+ WW WG
Sbjct: 1053 EAWWQLFWG 1057
BLAST of Lcy12g004580 vs. NCBI nr
Match:
XP_030505522.1 (uncharacterized protein LOC115720515 [Cannabis sativa])
HSP 1 Score: 276.6 bits (706), Expect = 2.7e-70
Identity = 116/307 (37.79%), Postives = 187/307 (60.91%), Query Frame = 0
Query: 1 MGMQVVDNLGRYLGVSSSFSRNRKEDFKGVKQRVWQTLQGWKGKFFSMGGKEVLIKSVAQ 60
+ M + + + YLG+ RN+K F+ +K ++W L W K FS GKE+L+K+V Q
Sbjct: 445 LAMTMTEEIETYLGLPMVVGRNKKAIFRPIKDKIWSKLNSWHTKLFSQAGKEILLKAVVQ 504
Query: 61 AIPTYIMSCFRLPSTLCDDLHKMMARFWWGTTEMKKKIHWKRWDLMCTPKEVGGLNSGDL 120
++P Y MSCF +P C+++ K+MAR+WWG+ + K+KIHW+ W +C K GGL
Sbjct: 505 SMPMYYMSCFIIPEGTCEEIEKLMARYWWGSFQSKRKIHWRAWQKLCFSKRKGGLGFRRF 564
Query: 121 KGFNRALLAKQVWRIFTSPSILVSKVIKGPYAYNMSVLDAPVKSNCSVFWRGFVWAHGLF 180
+N+ALLAKQ WR+ +P+ ++++V+K Y S L+A S+ S WRG VW L
Sbjct: 565 VQYNQALLAKQAWRVLINPTSILAQVLKARYFPQQSFLEATESSHPSQIWRGIVWGKELL 624
Query: 181 FNGMRKQVGNGTSIKFFHDPWIPKDNTFKPLRIDHSITNDNLLVADLITPSKEWNVQKLK 240
G+R+++GNG + + F DPWIP+ +F P+ + + ++V++LI S +WN+ +
Sbjct: 625 IKGLRRRIGNGANTRVFKDPWIPRPPSFLPITKE---VGNLMMVSELIEQSGQWNIDLIH 684
Query: 241 ELVSEVDANIISAIPISLGNDEDRWIWHYSKNGKYPVKIGYTVAIMSNVDIASSSVNILK 300
++ S D+ +I +IPI+L +D W+WH++ +G Y VK GY +AI SSS ++
Sbjct: 685 QVFSTPDSQLILSIPITLYEHDDDWLWHFTSHGHYSVKSGYNLAIGGENLQPSSSNEVMA 744
Query: 301 NWWGTLW 308
WW + W
Sbjct: 745 AWWSSYW 748
BLAST of Lcy12g004580 vs. NCBI nr
Match:
XP_022131662.1 (uncharacterized protein LOC111004787 [Momordica charantia])
HSP 1 Score: 276.2 bits (705), Expect = 3.5e-70
Identity = 127/271 (46.86%), Postives = 179/271 (66.05%), Query Frame = 0
Query: 38 LQGWKGKFFSMGGKEVLIKSVAQAIPTYIMSCFRLPSTLCDDLHKMMARFWWGTTEMKKK 97
+QGWK FFS+GGKEVLIKSV QAIP Y MS FRLP C+++ +M ARFWWG++ KK
Sbjct: 1 MQGWKRSFFSVGGKEVLIKSVGQAIPAYAMSVFRLPKGFCEEVSQMFARFWWGSSNDTKK 60
Query: 98 IHWKRWDLMCTPKEVGGLNSGDLKGFNRALLAKQVWRIFTSPSILVSKVIKGPYAYNMSV 157
+HW W+ MC PKE+GGLN DL+GFN+AL+AKQVWR+ +P+ILVS+V+K Y ++ V
Sbjct: 61 LHWMSWERMCLPKELGGLNFRDLEGFNQALVAKQVWRVLQNPNILVSRVLKAKYFHDSLV 120
Query: 158 LDAPVKSNCSVFWRGFVWAHGLFFNGMRKQVGNGTSIKFFHDPWIPKDNTFKPLRIDHSI 217
L A N S FW+GF+W L G+R +VGNG++I F DPWIP+ +F+P I
Sbjct: 121 LQATHLRNQSYFWKGFIWGRDLLIKGLRSRVGNGSTINIFSDPWIPRPYSFRP--ITAPF 180
Query: 218 TNDNLLVADLITPSKEWNVQKLKELVSEVDANIISAIPISLGNDEDRWIWHYSKNGKYPV 277
++ VADLI P+ +W+V + + E D ++I ++P+S N D WIWH+ K G Y V
Sbjct: 181 GPYDVKVADLINPNGQWDVHLISYIFCEEDRDLILSMPVSPYNSVDSWIWHFDKRGHYNV 240
Query: 278 KIGYTVAIMSNVDIASSSVNILKNWWGTLWG 309
K ++++++ I S+ V + G + G
Sbjct: 241 K-----SVINSIYIRSAMVYLQVQALGDIIG 264
BLAST of Lcy12g004580 vs. NCBI nr
Match:
XP_030509336.1 (uncharacterized protein LOC115724021 [Cannabis sativa])
HSP 1 Score: 275.8 bits (704), Expect = 4.6e-70
Identity = 127/307 (41.37%), Postives = 184/307 (59.93%), Query Frame = 0
Query: 1 MGMQVVDNLGRYLGVSSSFSRNRKEDFKGVKQRVWQTLQGWKGKFFSMGGKEVLIKSVAQ 60
+GM + D +YLG+ + R++K+ F +K+R+W+ + W K FS+GGKEVL+K+V Q
Sbjct: 484 LGMPISDCHEKYLGLPAYSERDKKQLFADIKERIWKLMNSWNDKLFSIGGKEVLLKAVVQ 543
Query: 61 AIPTYIMSCFRLPSTLCDDLHKMMARFWWGTTEMKKKIHWKRWDLMCTPKEVGGLNSGDL 120
+IPTY+MSCF+LPST L +MMA FWWG+ + KKK HW++W L+C K GG+
Sbjct: 544 SIPTYVMSCFKLPSTFSHQLEQMMANFWWGSDKDKKKTHWRKWKLLCKTKMDGGMGFRSF 603
Query: 121 KGFNRALLAKQVWRIFTSPSILVSKVIKGPYAYNMSVLDAPVKSNCSVFWRGFVWAHGLF 180
FN+ALLAKQ WRI P L+S+V+KG Y + L AP S+ W+G W L
Sbjct: 604 IHFNQALLAKQAWRIIQFPHSLLSRVLKGRYFSHNDFLQAPKTGCSSLTWQGICWGRDLL 663
Query: 181 FNGMRKQVGNGTSIKFFHDPWIPKDNTFKPLRIDHSITNDNLLVADLITPSKEWNVQKLK 240
G+R ++G+G+S++ DPWIP+ + F P+ N LV+ IT KEWN+ L
Sbjct: 664 VKGLRLKIGDGSSVQCISDPWIPRHSEFTPICFLGDTQN---LVSYYITDDKEWNLPLLA 723
Query: 241 ELVSEVDANIISAIPISLGNDEDRWIWHYSKNGKYPVKIGYTVAIMSNVDIASSSVNILK 300
S VD + I +IP+S + D+WIWH++ + +Y V+ GY +A S+S N
Sbjct: 724 RDFSAVDVDYILSIPLSSSSVSDQWIWHFTNSNEYTVQSGYHLANDLEDSDLSNSSNNQH 783
Query: 301 NWWGTLW 308
WW W
Sbjct: 784 TWWKYFW 787
BLAST of Lcy12g004580 vs. NCBI nr
Match:
XP_030479133.1 (uncharacterized protein LOC115696372 [Cannabis sativa])
HSP 1 Score: 275.0 bits (702), Expect = 7.8e-70
Identity = 128/307 (41.69%), Postives = 181/307 (58.96%), Query Frame = 0
Query: 1 MGMQVVDNLGRYLGVSSSFSRNRKEDFKGVKQRVWQTLQGWKGKFFSMGGKEVLIKSVAQ 60
+GM + + YLG+ + R++ + F +K+++W+ + W K FS+GGKEVL+K+V Q
Sbjct: 703 LGMPICECHEAYLGLPAYSERDKSQLFSNIKEKIWKLMHAWNDKIFSIGGKEVLLKAVVQ 762
Query: 61 AIPTYIMSCFRLPSTLCDDLHKMMARFWWGTTEMKKKIHWKRWDLMCTPKEVGGLNSGDL 120
+IPTY MSCFRLP LC+++ MMA+FWWG++ KKIHWK+W +C K GG+
Sbjct: 763 SIPTYAMSCFRLPVKLCNEIEAMMAKFWWGSSSDNKKIHWKKWRFLCKSKGDGGMGFRSF 822
Query: 121 KGFNRALLAKQVWRIFTSPSILVSKVIKGPYAYNMSVLDAPVKSNCSVFWRGFVWAHGLF 180
FN+ALLAKQ WRIF P+ L+S+V+KG Y + A S+ W+G VW L
Sbjct: 823 VHFNQALLAKQAWRIFQDPTSLLSRVLKGHYFSQNDFMTARGGGLSSLTWQGIVWGRELL 882
Query: 181 FNGMRKQVGNGTSIKFFHDPWIPKDNTFKPLRIDHSITNDNLLVADLITPSKEWNVQKLK 240
G+R +VG G +I+ D WIP FKP + TN VAD IT ++EWN++ L+
Sbjct: 883 VKGLRLKVGTGNNIRCAVDSWIPGHKGFKPYCYTGAHTNH---VADYITATREWNIECLQ 942
Query: 241 ELVSEVDANIISAIPISLGNDEDRWIWHYSKNGKYPVKIGYTVAIMSNVDIASSSVNILK 300
S D + I IP+S DRWIWHY +G Y V GYT+A + SS + +
Sbjct: 943 SDFSTPDVDNILKIPLSFLPVNDRWIWHYEDSGDYSVSSGYTLASSLGEEDLSSCSHTQE 1002
Query: 301 NWWGTLW 308
WW + W
Sbjct: 1003 TWWKSFW 1006
BLAST of Lcy12g004580 vs. TAIR 10
Match:
AT4G29090.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 152.9 bits (385), Expect = 4.2e-37
Identity = 78/230 (33.91%), Postives = 118/230 (51.30%), Query Frame = 0
Query: 61 AIPTYIMSCFRLPSTLCDDLHKMMARFWWGTTEMKKKIHWKRWDLMCTPKEVGGLNSGDL 120
A+PTY M+CF LP T+C + ++A FWW + K +HWK WD + K GG+ D+
Sbjct: 2 ALPTYTMACFLLPKTVCKQIISVLADFWWRNKQEAKGMHWKAWDHLSCYKAEGGIGFKDI 61
Query: 121 KGFNRALLAKQVWRIFTSPSILVSKVIKGPYAYNMSVLDAPVKSNCSVFWRGFVWAHGLF 180
+ FN ALL KQ+WR+ + P L++KV K Y + L+AP+ S S W+ + +
Sbjct: 62 EAFNLALLGKQMWRMLSRPESLMAKVFKSRYFHKSDPLNAPLGSRPSFVWKSIHASQEIL 121
Query: 181 FNGMRKQVGNGTSIKFFHDPWIPKDNTFKPLRI------DHSITNDNLLVADLITPS-KE 240
G R VGNG I + W+ LR+ +++ + L V+DLI S +E
Sbjct: 122 RQGARAVVGNGEDIIIWRHKWLDSKPASAALRMQRVPPQEYASVSSILKVSDLIDESGRE 181
Query: 241 WNVQKLKELVSEVDANIISAIPISLGNDEDRWIWHYSKNGKYPVKIGYTV 284
W ++ L EV+ +I + D + W Y+ +G Y VK GY V
Sbjct: 182 WRKDVIEMLFPEVERKLIGELRPGGRRILDSYTWDYTSSGDYTVKSGYWV 231
BLAST of Lcy12g004580 vs. TAIR 10
Match:
ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )
HSP 1 Score: 121.7 bits (304), Expect = 1.0e-27
Identity = 59/152 (38.82%), Postives = 82/152 (53.95%), Query Frame = 0
Query: 61 AIPTYIMSCFRLPSTLCDDLHKMMARFWWGTTEMKKKIHWKRWDLMCTPKE-VGGLNSGD 120
A+P Y MSCFRL LC L M FWW + E K+KI W W +C KE GGL D
Sbjct: 2 ALPVYAMSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRD 61
Query: 121 LKGFNRALLAKQVWRIFTSPSILVSKVIKGPYAYNMSVLDAPVKSNCSVFWRGFVWAHGL 180
L FN+ALLAKQ +RI P L+S++++ Y + S+++ V + S WR + L
Sbjct: 62 LGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGREL 121
Query: 181 FFNGMRKQVGNGTSIKFFHDPWIPKDNTFKPL 212
G+ + +G+G K + D WI + PL
Sbjct: 122 LSRGLLRTIGDGIHTKVWLDRWIMDETPLPPL 153
BLAST of Lcy12g004580 vs. TAIR 10
Match:
AT3G24255.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )
HSP 1 Score: 67.4 bits (163), Expect = 2.3e-11
Identity = 34/115 (29.57%), Postives = 55/115 (47.83%), Query Frame = 0
Query: 11 RYLGVSSSFSRNRKEDFKGVKQRVWQTLQGWKGKFFSMGGKEVLIKSVAQAIPTYIMSCF 70
RYLG+ + D+ + +++ + W + S G+ LI SV ++ + MS F
Sbjct: 26 RYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHLSFAGRLQLISSVIHSLTNFWMSAF 85
Query: 71 RLPSTLCDDLHKMMARFWWGTTEMKKKIHWKRWDLMCTPKEVGGLNSGDLKGFNR 126
RLPS ++ + + F W E+ K W +CTPK+ GGL LK N+
Sbjct: 86 RLPSACIKEIDSICSSFLWSGPELNTKKAKVAWSDVCTPKDEGGLGIRSLKEANK 140
BLAST of Lcy12g004580 vs. TAIR 10
Match:
AT3G09510.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 58.2 bits (139), Expect = 1.4e-08
Identity = 34/138 (24.64%), Postives = 63/138 (45.65%), Query Frame = 0
Query: 147 IKGPYAYNMSVLDAPVKSNCSVFWRGFVWAHGLFFNGMRKQVGNGTSIKFFHDPWIPKDN 206
+K Y ++S+LDA V+ S W + L G R +G+G +I+ D + +
Sbjct: 1 MKARYFKDVSILDAKVRKQQSYGWASLLDGIALLKKGTRHLIGDGQNIRIGLDNIV---D 60
Query: 207 TFKPLRIDHSITNDNLLVADLITPSKE---WNVQKLKELVSEVDANIISAIPISLGNDED 266
+ P ++ T + + +L W+ K+ + V + D I I ++ D
Sbjct: 61 SHPPRPLNTEETYKEMTINNLFERKGSYYFWDDSKISQFVDQSDHGFIHRIYLAKSKKPD 120
Query: 267 RWIWHYSKNGKYPVKIGY 282
+ IW+Y+ G+Y V+ GY
Sbjct: 121 KIIWNYNTTGEYTVRSGY 135
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P0C2F6 | 2.9e-27 | 26.64 | Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1... | [more] |
P93295 | 1.4e-26 | 38.82 | Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 ... | [more] |
Match Name | E-value | Identity | Description | |
A0A803PM68 | 1.9e-77 | 44.30 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803QJV0 | 1.3e-75 | 44.63 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803NHG3 | 2.3e-75 | 44.63 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803PV25 | 2.5e-74 | 44.63 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803PIB6 | 5.6e-74 | 43.69 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT4G29090.1 | 4.2e-37 | 33.91 | Ribonuclease H-like superfamily protein | [more] |
ATMG00310.1 | 1.0e-27 | 38.82 | RNA-directed DNA polymerase (reverse transcriptase)-related family protein | [more] |
AT3G24255.1 | 2.3e-11 | 29.57 | RNA-directed DNA polymerase (reverse transcriptase)-related family protein | [more] |
AT3G09510.1 | 1.4e-08 | 24.64 | Ribonuclease H-like superfamily protein | [more] |