Lcy12g003300 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTGAAACTACATCAAAGGGTTACGATGCACATTGGAGGGGGATTTGGCATCAACTTGGGTGGTTGGGTTGATCCCTTCCATGGTCATGGCCATGGTCATGGTCGTGGTCATGGGCATGGGCATGGTCATGGTCATGGGCATGATCGACCTCCGAGTCCCGAACCTTATGGCAAATGGATAGAAATCTCTGTCCACGAACAAGAGGTGCAAGAAGTTGCAAAGTTTGCGGTGGCAGAGTACAATCGCATACACGATGACTGTTTGAAATACAAGTCGACATCTGCAGCTTGGTATATGGCTTTGGATGAGAAGAGCAAACAGTTCCGCCTCAATCTTCAAGGGGAAGACTGTTTGGGACGTAGCCTCAACTATGAGGCTATGGTTCATGAAAACAGAGTTCATCATGAAAAAGTCTGGACGCTTGAATCATTCAAGCGTGCATAAACAAGTGATGGAACTTCGTTTTAAGTTTCTCCTAACTACTAGGTCGCTTATGTTGTAATGGGTTTGACTAGATCCATGAATAATATATATACGACCAAATCGTAATAAAATAAAGCTTTATAAATAATCGCTTCTCTATGTTTAAACTATGTATCGTCGTAAATCAACTTCTTAGATTCCTACGAATATATCTTTGAAATAGTCAAAATTAGTTTAATAGAAAATTAGAAATCACTTAGGACCCGTTGGATAACGTTCCCGTTTCCTGTTTTCCATTTCTGGTTTCTTGCGTTTCTTGTTTTTCTTT TTTGAAACTACATCAAAGGGTTACGATGCACATTGGAGGGGGATTTGGCATCAACTTGGGTGGTTGGGTTGATCCCTTCCATGGTCATGGCCATGGTCATGGTCGTGGTCATGGGCATGGGCATGGTCATGGTCATGGGCATGATCGACCTCCGAGTCCCGAACCTTATGGCAAATGGATAGAAATCTCTGTCCACGAACAAGAGGTGCAAGAAGTTGCAAAGTTTGCGGTGGCAGAGTACAATCGCATACACGATGACTGTTTGAAATACAAGTCGACATCTGCAGCTTGGTATATGGCTTTGGATGAGAAGAGCAAACAGTTCCGCCTCAATCTTCAAGGGGAAGACTGTTTGGGACGTAGCCTCAACTATGAGGCTATGGTTCATGAAAACAGAGTTCATCATGAAAAAGTCTGGACGCTTGAATCATTCAAGCGTGCATAAACAAGTGATGGAACTTCGTTTTAAGTTTCTCCTAACTACTAGGTCGCTTATGTTGTAATGGGTTTGACTAGATCCATGAATAATATATATACGACCAAATCGTAATAAAATAAAGCTTTATAAATAATCGCTTCTCTATGTTTAAACTATGTATCGTCGTAAATCAACTTCTTAGATTCCTACGAATATATCTTTGAAATAGTCAAAATTAGTTTAATAGAAAATTAGAAATCACTTAGGACCCGTTGGATAACGTTCCCGTTTCCTGTTTTCCATTTCTGGTTTCTTGCGTTTCTTGTTTTTCTTT ATGCACATTGGAGGGGGATTTGGCATCAACTTGGGTGGTTGGGTTGATCCCTTCCATGGTCATGGCCATGGTCATGGTCGTGGTCATGGGCATGGGCATGGTCATGGTCATGGGCATGATCGACCTCCGAGTCCCGAACCTTATGGCAAATGGATAGAAATCTCTGTCCACGAACAAGAGGTGCAAGAAGTTGCAAAGTTTGCGGTGGCAGAGTACAATCGCATACACGATGACTGTTTGAAATACAAGTCGACATCTGCAGCTTGGTATATGGCTTTGGATGAGAAGAGCAAACAGTTCCGCCTCAATCTTCAAGGGGAAGACTGTTTGGGACGTAGCCTCAACTATGAGGCTATGGTTCATGAAAACAGAGTTCATCATGAAAAAGTCTGGACGCTTGAATCATTCAAGCGTGCATAA MHIGGGFGINLGGWVDPFHGHGHGHGRGHGHGHGHGHGHDRPPSPEPYGKWIEISVHEQEVQEVAKFAVAEYNRIHDDCLKYKSTSAAWYMALDEKSKQFRLNLQGEDCLGRSLNYEAMVHENRVHHEKVWTLESFKRA Homology
BLAST of Lcy12g003300 vs. ExPASy TrEMBL
Match: A0A6J1EIQ8 (uncharacterized protein LOC111434517 OS=Cucurbita moschata OX=3662 GN=LOC111434517 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 4.9e-09 Identity = 37/88 (42.05%), Postives = 54/88 (61.36%), Query Frame = 0
BLAST of Lcy12g003300 vs. ExPASy TrEMBL
Match: A0A6J1JKF7 (uncharacterized protein LOC111486626 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111486626 PE=4 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 6.4e-09 Identity = 44/96 (45.83%), Postives = 60/96 (62.50%), Query Frame = 0
BLAST of Lcy12g003300 vs. ExPASy TrEMBL
Match: A0A6J1JG70 (uncharacterized protein LOC111486626 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111486626 PE=4 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 6.4e-09 Identity = 44/96 (45.83%), Postives = 60/96 (62.50%), Query Frame = 0
BLAST of Lcy12g003300 vs. ExPASy TrEMBL
Match: P94012 (Phloem filament protein OS=Cucurbita maxima OX=3661 GN=PP1 PE=4 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 6.4e-09 Identity = 44/96 (45.83%), Postives = 60/96 (62.50%), Query Frame = 0
BLAST of Lcy12g003300 vs. ExPASy TrEMBL
Match: Q7DMD5 (Phloem filament protein (Fragment) OS=Cucurbita maxima OX=3661 GN=cPC7 PE=2 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 6.4e-09 Identity = 44/96 (45.83%), Postives = 60/96 (62.50%), Query Frame = 0
BLAST of Lcy12g003300 vs. NCBI nr
Match: XP_023522970.1 (uncharacterized protein LOC111787034 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 76.3 bits (186), Expect = 2.4e-10 Identity = 40/89 (44.94%), Postives = 53/89 (59.55%), Query Frame = 0
BLAST of Lcy12g003300 vs. NCBI nr
Match: XP_038887075.1 (uncharacterized protein LOC120077251 [Benincasa hispida] >XP_038887076.1 uncharacterized protein LOC120077253 [Benincasa hispida]) HSP 1 Score: 75.9 bits (185), Expect = 3.1e-10 Identity = 44/89 (49.44%), Postives = 57/89 (64.04%), Query Frame = 0
BLAST of Lcy12g003300 vs. NCBI nr
Match: KAG6588758.1 (hypothetical protein SDJN03_17323, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 75.5 bits (184), Expect = 4.1e-10 Identity = 38/89 (42.70%), Postives = 53/89 (59.55%), Query Frame = 0
BLAST of Lcy12g003300 vs. NCBI nr
Match: KAG6588755.1 (hypothetical protein SDJN03_17320, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 75.1 bits (183), Expect = 5.3e-10 Identity = 40/89 (44.94%), Postives = 53/89 (59.55%), Query Frame = 0
BLAST of Lcy12g003300 vs. NCBI nr
Match: KAG6588757.1 (hypothetical protein SDJN03_17322, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 75.1 bits (183), Expect = 5.3e-10 Identity = 39/89 (43.82%), Postives = 54/89 (60.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
|