
Lcy12g002720 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCTTAGTTCATGCAGGCGGTTGGAGGTCCGATAATGGGACATTCAAAGTTGGGTATCTGGGGCAATTGGAGAATTTGATGAGGGAGAAACTGCCTGGACAGGACGTTCCAGCACAGAGCAGCATCGACTCTACGGTTCACACCTTAAAGAAACAATACCAAGCAATTGCAGAGATTTTGGGTCCTGGATGTAGCAACTTTGGGTGGAACGATGAATTTTAA ATGTCCTTAGTTCATGCAGGCGGTTGGAGGTCCGATAATGGGACATTCAAAGTTGGGTATCTGGGGCAATTGGAGAATTTGATGAGGGAGAAACTGCCTGGACAGGACGTTCCAGCACAGAGCAGCATCGACTCTACGGTTCACACCTTAAAGAAACAATACCAAGCAATTGCAGAGATTTTGGGTCCTGGATGTAGCAACTTTGGGTGGAACGATGAATTTTAA ATGTCCTTAGTTCATGCAGGCGGTTGGAGGTCCGATAATGGGACATTCAAAGTTGGGTATCTGGGGCAATTGGAGAATTTGATGAGGGAGAAACTGCCTGGACAGGACGTTCCAGCACAGAGCAGCATCGACTCTACGGTTCACACCTTAAAGAAACAATACCAAGCAATTGCAGAGATTTTGGGTCCTGGATGTAGCAACTTTGGGTGGAACGATGAATTTTAA MSLVHAGGWRSDNGTFKVGYLGQLENLMREKLPGQDVPAQSSIDSTVHTLKKQYQAIAEILGPGCSNFGWNDEF Homology
BLAST of Lcy12g002720 vs. ExPASy TrEMBL
Match: A0A5A7U0H7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G002060 PE=4 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 1.6e-19 Identity = 45/74 (60.81%), Postives = 56/74 (75.68%), Query Frame = 0
BLAST of Lcy12g002720 vs. ExPASy TrEMBL
Match: A0A1S3B4L3 (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 1.6e-19 Identity = 45/74 (60.81%), Postives = 56/74 (75.68%), Query Frame = 0
BLAST of Lcy12g002720 vs. ExPASy TrEMBL
Match: A0A5A7UFK7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold207G00820 PE=4 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 8.0e-19 Identity = 46/73 (63.01%), Postives = 53/73 (72.60%), Query Frame = 0
BLAST of Lcy12g002720 vs. ExPASy TrEMBL
Match: A0A5D3CQS4 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold5G00390 PE=4 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 1.1e-18 Identity = 44/74 (59.46%), Postives = 55/74 (74.32%), Query Frame = 0
BLAST of Lcy12g002720 vs. ExPASy TrEMBL
Match: A0A5A7SWU2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1369G00190 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 1.8e-18 Identity = 45/73 (61.64%), Postives = 53/73 (72.60%), Query Frame = 0
BLAST of Lcy12g002720 vs. NCBI nr
Match: XP_008441954.1 (PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo] >KAA0047736.1 retrotransposon protein [Cucumis melo var. makuwa] >TYK08388.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 104.8 bits (260), Expect = 3.3e-19 Identity = 45/74 (60.81%), Postives = 56/74 (75.68%), Query Frame = 0
BLAST of Lcy12g002720 vs. NCBI nr
Match: KAA0052259.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 102.4 bits (254), Expect = 1.7e-18 Identity = 46/73 (63.01%), Postives = 53/73 (72.60%), Query Frame = 0
BLAST of Lcy12g002720 vs. NCBI nr
Match: KAA0066605.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK14213.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 102.1 bits (253), Expect = 2.2e-18 Identity = 44/74 (59.46%), Postives = 55/74 (74.32%), Query Frame = 0
BLAST of Lcy12g002720 vs. NCBI nr
Match: KAA0038975.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 101.3 bits (251), Expect = 3.7e-18 Identity = 45/73 (61.64%), Postives = 53/73 (72.60%), Query Frame = 0
BLAST of Lcy12g002720 vs. NCBI nr
Match: KAA0046637.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 101.3 bits (251), Expect = 3.7e-18 Identity = 45/73 (61.64%), Postives = 53/73 (72.60%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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