Lcy12g001540 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATCTTTTACCCACTGTCAAGTCTGCTTCAGAATTTTCTTGCGTGCGCAGAGTTAATATAGACGTTTATGAATATGAATTCGAGAGAGGTTCGAATAACTCTCAAAATTCTATAGAAAATTTCTATGAGTTGCTTAAAGTGTTTCATAATGCAAGGTGTTTCACACTGCCTTTCAAAGCAATAAAGGTATCGAAAAGTTCTTTCCTCTCTTCCTTTTCATTCCCTTTCTTTTATTCTCAGCAACATTTTCGTAATTAA ATGAATCTTTTACCCACTGTCAAGTCTGCTTCAGAATTTTCTTGCGTGCGCAGAGTTAATATAGACGTTTATGAATATGAATTCGAGAGAGGTTCGAATAACTCTCAAAATTCTATAGAAAATTTCTATGAGTTGCTTAAAGTGTTTCATAATGCAAGGTGTTTCACACTGCCTTTCAAAGCAATAAAGCAACATTTTCGTAATTAA ATGAATCTTTTACCCACTGTCAAGTCTGCTTCAGAATTTTCTTGCGTGCGCAGAGTTAATATAGACGTTTATGAATATGAATTCGAGAGAGGTTCGAATAACTCTCAAAATTCTATAGAAAATTTCTATGAGTTGCTTAAAGTGTTTCATAATGCAAGGTGTTTCACACTGCCTTTCAAAGCAATAAAGCAACATTTTCGTAATTAA MNLLPTVKSASEFSCVRRVNIDVYEYEFERGSNNSQNSIENFYELLKVFHNARCFTLPFKAIKQHFRN Homology
BLAST of Lcy12g001540 vs. ExPASy TrEMBL
Match: A0A6J1CKA9 (LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein At5g18770-like OS=Momordica charantia OX=3673 GN=LOC111012077 PE=4 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 4.1e-09 Identity = 34/64 (53.12%), Postives = 44/64 (68.75%), Query Frame = 0
BLAST of Lcy12g001540 vs. ExPASy TrEMBL
Match: A0A5A7TCF1 (F-box/LRR-repeat protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00570 PE=4 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 4.7e-05 Identity = 26/64 (40.62%), Postives = 41/64 (64.06%), Query Frame = 0
BLAST of Lcy12g001540 vs. ExPASy TrEMBL
Match: A0A1S3CB41 (F-box/LRR-repeat protein At3g26922-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498689 PE=4 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 7.9e-05 Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 0
BLAST of Lcy12g001540 vs. ExPASy TrEMBL
Match: A0A0A0KSW6 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G650430 PE=4 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 1.0e-04 Identity = 33/64 (51.56%), Postives = 40/64 (62.50%), Query Frame = 0
BLAST of Lcy12g001540 vs. NCBI nr
Match: XP_022141791.1 (LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein At5g18770-like [Momordica charantia]) HSP 1 Score: 70.1 bits (170), Expect = 8.4e-09 Identity = 34/64 (53.12%), Postives = 44/64 (68.75%), Query Frame = 0
BLAST of Lcy12g001540 vs. NCBI nr
Match: XP_038890214.1 (F-box/LRR-repeat protein At3g26922-like [Benincasa hispida]) HSP 1 Score: 68.9 bits (167), Expect = 1.9e-08 Identity = 34/61 (55.74%), Postives = 43/61 (70.49%), Query Frame = 0
BLAST of Lcy12g001540 vs. NCBI nr
Match: XP_038890213.1 (uncharacterized protein LOC120079853 [Benincasa hispida]) HSP 1 Score: 65.1 bits (157), Expect = 2.7e-07 Identity = 34/63 (53.97%), Postives = 42/63 (66.67%), Query Frame = 0
BLAST of Lcy12g001540 vs. NCBI nr
Match: KAA0039267.1 (F-box/LRR-repeat protein [Cucumis melo var. makuwa] >TYK00453.1 F-box/LRR-repeat protein [Cucumis melo var. makuwa]) HSP 1 Score: 56.6 bits (135), Expect = 9.6e-05 Identity = 26/64 (40.62%), Postives = 41/64 (64.06%), Query Frame = 0
BLAST of Lcy12g001540 vs. NCBI nr
Match: XP_008459617.1 (PREDICTED: F-box/LRR-repeat protein At3g26922-like isoform X1 [Cucumis melo]) HSP 1 Score: 55.8 bits (133), Expect = 1.6e-04 Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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