Lcy12g000970 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy12g000970
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	nitrate regulatory gene2 protein-like
Location	Chr12: 1343501 .. 1347719 (-)
RNA-Seq Expression	Lcy12g000970
Synteny	Lcy12g000970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCTAAAACTCGAGCTCAAGAATTGGAGATCAAATTTCATCAATTTAATCACGACCCAGAAGGGATTGTGTCAAAGCCCTCAACGGCTGGCTTCTCCGCTGCCTTCTCTACGAACCCGAGCCCGAAGAAACCCCCAACACCGCCTGTCCGCCGCCCTTCTCTCCGGCCAGAATCGGCGCCCCGCCTGTGTTCGTAATCGCCCACCTCTGGTTCGACACTGCCGAAAAATCCTCCAACAAGGACGTTTCTGAGGCCATACAGGAGCTCGTTTCGAATCTGGATTAGGCGTTGGAACAACAGAGTTCGGATTTGCAGAGATTGGCGTTTGTGAATAGAGATTTGGAGAAGAAGATTAAGATTAAGAAGACAAGTAACCAAGGTTTTGAGGAGAAGACGATGGCGGTGACAGCGGGGACTGTTCATAAAGTGGGTAAGTTTAGTGGTTGTGAGATTCAAATGGGGCTGAGGCAGATTCTTGTGGGGTTGACGAGGTTTTGTGGAGACTCCATTGCAGCTTACGAGGAGCTTTGTTCTTCAGCCATGGGAGAAAGTTCGGCGCCGGAATCGCCTCCCCGATTCTCCCTCTTTTCTTAAAAAAAAACAGAAAAGAAAATAAAATAAAGGAGAAGAAGGGAAAAAAAAAAAGAAATTCGTCGGCGGACAGGCGGCGGTGGTCGCCGGCCGCCGGCCGCCGGCGATTTGCTGAAGAAGAAAAGAGAAGAGGTTGAAGTTGAAGAAAAGATAAGAATAAGAAAGAGGGAGAAAGAATTAAAAAAATAATAAAATAATAATATTTTTATTTAGAAAAATTAAAAAATATTTTTTTATTAAAATAATAGTGCCACGTCAGCAAACTGTTAGGGTTTAACAGAAAATTTGACGGAGGGACCAAAAGTGTAACGAAATCCAAACCTCAGGGGTAAAATTGTTGAGTTTGAAAACTCAATGACCAAAGTGTAACTTAACCCAAACCTCAGGGACCAAAAGTGTATTTTTCCCTACAAATAATCAACTATATATATAAATATATATATAATCAATTATAATTAAAAATTATAATTATAATTTAATATTAAACAATTTTAATATTAAATCTTTGCACCAATCCCGAATCCTCTCTAAACCGACGAATATGAATCATTATTCGAATTCAAACCAAAAATATGTATGTTATACATATTTCCAATATTTAAATCATAATTAAATATGACCAACTCTCTCAATAATTATAGTTTAATTCATAATTAAACTTTTACACATTAAGTATATCGTATATGACCAACGTTAACTCCCTAATACGAATTTGAACGTTTCAAACTCTTTCATCATATTGTTCTAAGGTTTAGTCCGTATGAGCTAGCAGGGGAACCTGATGGACCTACAGATCATGGGCTTCAAGGATCCGAGATTAACCAGTTAAAATCATTAACCTAGCTAACCAACATTCGTTTAACTAACGGGACACTCCACTATAGCCCGTAGCTGCACTCCCTTCATTGTAGATATATTTATGTCCCCCCAATATAACCATAATTAGTTAGTCGACCCTTCACAGGTTGTTCGTAACTGCAGCAGGTCAAATGTTCGTTTTACCTCTGAAGTTACATCTTGTTCCTTAAGTTCCACTGATCCTCTAATGAATAATTTGTTTATGGTTCAACCATTAAACAAAAGTTCCTCTCGGGCCAGGAGAGGACAGCGCACCTTTGTTCAAGACCCGGAGTCAGCACTTAAGGGAACAACCTCTACTATCTCTACAGGCGGGTAGGATTGAATTCCATCTCGCAAGACTATGTCCCCAGCTATCTACCCGATCTTATACCCAAAATGATAGGCTTATTGAGTCGGCGATGATGAGCCACTCTCACCCATGCAAATCAAAGGATAATCCCAAATAAACAGGATTTCATAGTTAGCTCAGGATAAAGATCGAGTTACCCTAGGTCATCGCATGAAATAGTCAGTTTCACAGTAAACGACGTTATAAAGTGAAAGTGACTTGTTACGTGGTTTGGTCTTATGCAAACTCATTGCATAGGACGCCCCCAGTCGCATGTCTTCACATGAACGATTTAGGATCACATCGTTTGTACTAAGTACAAAGTGGGTCGCGTCTCATAGTGTCCCCAGGATAAGGTGCCCAACCTTAACCCTATACTATAGACAGTTTTGGCTATTACTCGAACTTGATCCGCTTTTATGTGTACACATAAAGTTCAAGTGTTCATTATATAGCCATGGGTTCTGGTTTATTGGATTTGGGTTAATTAATGCAGATTTAAACAATCATTCAATAATTACTTATTGAATAACCTCAATAATGCTTTATTGATCATAACTAACTTGTTACATTTACTATCCACAAATTTTAGGACATAAAACCCAACACATAATGCTCATTTATGTGCATTATTTAGCCTTAAATGTTTAGAAAGCAAAGGCTTTGTGTTTAAAATCTTATCTTTTTTAGTTAAAATAGAAAAAGTCTTAGAATCATGGTGAAAATCTTACAAGTATAGAATTTATGCTTAATATGTACAAAAAGAGATTACTTTTGCAAGAATTTATCCAAAGTTAATGTTTTTGTGCAGAGGACTTTGCAAGGGAAATGTGCCCGCAATTGGAGAGAAAGAATTAGCGGAGCAATGAAGGTGTTAATATCTAACATGCGGAAGCAATTTTGGATCTTAGGCACATAATAACATCAATTTGATCATACAAAGCATGTTGTCCAAACCTACTAAAACAGAGTTTTTGAGTACCAACCTCTTATAGCTCAAAATTGGACCTCTTGTTGTGTTGTTTTTCCTCACCAACTGATCACGAACCATCACAAGATCTTCCTTGCTATTCTCAGGCCTTTGGAACGGATTGTGGGATCCTCTAGTGATGGGAATTGGAAGGAAAAGTGTTTGAACTTCAAGCTTTATGGAGTTATGAACATATGGGTTTGAGAAGCAAAATTGGCAGCATAACATTACACCAATTTCATGTTTTTCTTCAACCATGCTTGCTCTATATATAGAGGAAATTATGCAACTCAAAACCCCCAAAAATGGACAGAAAATTGGACACCTAATTAGAGAAAGCTTAAGGTGTCTTATGTGGGTTAAGTGCATGGAGGTGGTGTAATCCACCACCTCCTAAAATTCATTTTAATTTTGAATTTATTAATTCAAAATTAATCTTAATTTTAATTCTTAAATATAATTCATAATTATATTTTTATTTCCTTTTTAAATATAATTCGTAATTATATTTAATTCAAATTTTAATTAATTAAATATATTAATTTAATATCAAATATTAAATTAATATTTTTCCACTATTCCCGACCATCCTCGAAATTAATTTTCTCGAACATTATTTCCTATGTACGAGCTCAATATTTAAATCATATTTAAATAAGTCCAACTTTCAAGTTTTGGTTTAATTCGAAATTAAACCAATGTGTTCATAACTTAACCGACATTTGTTCCCTCTTCCATGTTTGAACATTTCTAATACATCTCATCATATTGTTCCAAAGTTTATTTCTTAAGCTAGCAAGGGGACCTAATGGACCTACAGATCATGGGCTCCAACGATTCGAGGTTTAACCGGTCAAACTCTTTTAACCTAGTTAACCAACATTCGTTAACTACCGGGTCATTCCACTATAGCCTAGTAGTTGCACTCCCCTCACTGTAGATATATTTTTTTCTACTCGATATAACCATGATTAGTAAGTCAACCATTCACAGGTCGTTCGTAACTATAGCTAGGTCAAAAGTTCGTTTTACCCCTATAGCACTTCTTGATTTCTTAAGTCCACTTATCCTCTAATGAACAATTTGTTTATGGTCCAACCACTAAACAGAGTCCCTCTCGGACCAATGAGAGGGTGGGGCCCCTTGTTCAAGCCTCGGAGTCCCTCTCGGGAACAACCTTTCTACTATCCCTAATACGGGTAGGAGTAAATTCCATCTTGCAATACTATGTCCCCAGCTATCTATCCAGTCTTATCCCCAAAGTGGTAAGGGTGTTAGGAAAGGTATATACATTGATAATCTTTTAAGGAATATTAAAGAAAACCACAAGGAAAAGTCCATTGATGATCTTTTTTATAAGTGCACCAAATCGTATACTGTTGGTGATTTTGAATATTACATGAGGCGGATGGAACAAATGATCCCTTCTATTAGAAGTGAGCTAGAAGAGTTAGGGTTTGCGTGA

mRNA sequence

ATGGATCTAAAACTCGAGCTCAAGAATTGGAGATCAAATTTCATCAATTTAATCACGACCCAGAAGGGATTGTGTCAAAGCCCTCAACGGCTGGCTTCTCCGCTGCCTTCTCTACGAACCCGAGCCCGAAGAAACCCCCAACACCGCCTGTCCGCCGCCCTTCTCTCCGGCCAGAATCGGCGCCCCGCCTGTGTTCGTAATCGCCCACCTCTGGCGTTGGAACAACAGAGTTCGGATTTGCAGAGATTGGCGTTTGTGAATAGAGATTTGGAGAAGAAGATTAAGATTAAGAAGACAAGTAACCAAGGTTTTGAGGAGAAGACGATGGCGGTGACAGCGGGGACTGTTCATAAAGTGGGTAAGTTTAGTGGTTGTGAGATTCAAATGGGGCTGAGGCAGATTCTTGTGGGGTTGACGAGGTTTTGTGGAGACTCCATTGCAGCTTACGAGGAGCTTTGTTCTTCAGCCATGGGAGAAAAAAACCACAAGGAAAAGTCCATTGATGATCTTTTTTATAAGTGCACCAAATCGTATACTGTTGGTGATTTTGAATATTACATGAGGCGGATGGAACAAATGATCCCTTCTATTAGAAGTGAGCTAGAAGAGTTAGGGTTTGCGTGA

Coding sequence (CDS)

ATGGATCTAAAACTCGAGCTCAAGAATTGGAGATCAAATTTCATCAATTTAATCACGACCCAGAAGGGATTGTGTCAAAGCCCTCAACGGCTGGCTTCTCCGCTGCCTTCTCTACGAACCCGAGCCCGAAGAAACCCCCAACACCGCCTGTCCGCCGCCCTTCTCTCCGGCCAGAATCGGCGCCCCGCCTGTGTTCGTAATCGCCCACCTCTGGCGTTGGAACAACAGAGTTCGGATTTGCAGAGATTGGCGTTTGTGAATAGAGATTTGGAGAAGAAGATTAAGATTAAGAAGACAAGTAACCAAGGTTTTGAGGAGAAGACGATGGCGGTGACAGCGGGGACTGTTCATAAAGTGGGTAAGTTTAGTGGTTGTGAGATTCAAATGGGGCTGAGGCAGATTCTTGTGGGGTTGACGAGGTTTTGTGGAGACTCCATTGCAGCTTACGAGGAGCTTTGTTCTTCAGCCATGGGAGAAAAAAACCACAAGGAAAAGTCCATTGATGATCTTTTTTATAAGTGCACCAAATCGTATACTGTTGGTGATTTTGAATATTACATGAGGCGGATGGAACAAATGATCCCTTCTATTAGAAGTGAGCTAGAAGAGTTAGGGTTTGCGTGA

Protein sequence

MDLKLELKNWRSNFINLITTQKGLCQSPQRLASPLPSLRTRARRNPQHRLSAALLSGQNRRPACVRNRPPLALEQQSSDLQRLAFVNRDLEKKIKIKKTSNQGFEEKTMAVTAGTVHKVGKFSGCEIQMGLRQILVGLTRFCGDSIAAYEELCSSAMGEKNHKEKSIDDLFYKCTKSYTVGDFEYYMRRMEQMIPSIRSELEELGFA

Homology

[Close]

BLAST of Lcy12g000970 vs. ExPASy TrEMBL
Match: A0A0A0KGR7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G358160 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 1.8e-36
Identity = 101/197 (51.27%), Postives = 121/197 (61.42%), Query Frame = 0


Query: 1   MDLKLELKNWRSNFINLITTQK-------------------------GLCQ---SPQRLA 60
           MDLKLEL+NWR+NFI LI TQK                         G C    SP+R+ 
Sbjct: 387 MDLKLELENWRTNFIELIATQKDCIKALNGWLLRCLLYEPDPEETPNGGCPPPFSPERIG 446

Query: 61  SPLPSLRTRARRNPQHRLSAALLSGQNRRPACVRNRPPLALEQQSSDLQRLAFVNRDLEK 120
           +P   +      +   + S   +S   +      ++   ALEQQS DLQRLA  N+DLEK
Sbjct: 447 APPVFVIGHLWSDTADKFSEKDVSEAMQGLVLKLDQ---ALEQQSLDLQRLALTNKDLEK 506

Query: 121 KIKIKK--TSNQGFEEKTMAVTAGTVHKVGKFSGCEIQMGLRQILVGLTRFCGDSIAAYE 168
           KIK+KK  T NQGFEEKTMAV AGTVHKVGKFSGCEIQ+G+RQI VGLTRFCGDSI AYE
Sbjct: 507 KIKVKKKTTMNQGFEEKTMAVAAGTVHKVGKFSGCEIQLGMRQIFVGLTRFCGDSIKAYE 566

[Close]

BLAST of Lcy12g000970 vs. ExPASy TrEMBL
Match: A0A5A7T6A4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold119G00300 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 2.2e-34
Identity = 96/192 (50.00%), Postives = 117/192 (60.94%), Query Frame = 0


Query: 1   MDLKLELKNWRSNFINLITTQK-------------------------GLCQ---SPQRLA 60
           MDLKLEL+NWR+NFI LI TQK                         G C    SP+R+ 
Sbjct: 390 MDLKLELENWRTNFIELIATQKDCIKALNGWLLRCLLYEPDPEETPNGGCPPPFSPERIG 449

Query: 61  SPLPSLRTRARRNPQHRLSAALLSGQNRRPACVRNRPPLALEQQSSDLQRLAFVNRDLEK 120
           +P   +      +   + S   +S   +      ++   ALEQQS DLQRLA  N+DLEK
Sbjct: 450 APPVFVIGHLWSDTADKFSDKDVSEAIQGLVLKLDQ---ALEQQSLDLQRLALANKDLEK 509

Query: 121 KIKIKKTSNQGFEEKTMAVTAGTVHKVGKFSGCEIQMGLRQILVGLTRFCGDSIAAYEEL 165
           KIK+KKT+    EEKT+AV AGTVHKVGKFSGCEIQ+GLRQI VGLTRFCGDSI AYEEL
Sbjct: 510 KIKVKKTTTMNHEEKTVAVAAGTVHKVGKFSGCEIQLGLRQIFVGLTRFCGDSIKAYEEL 569

[Close]

BLAST of Lcy12g000970 vs. ExPASy TrEMBL
Match: A0A1S3CP29 (uncharacterized protein LOC103502634 OS=Cucumis melo OX=3656 GN=LOC103502634 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 5.0e-34
Identity = 96/192 (50.00%), Postives = 116/192 (60.42%), Query Frame = 0


Query: 1   MDLKLELKNWRSNFINLITTQK-------------------------GLCQ---SPQRLA 60
           MDLKLEL+NWR+NFI LI TQK                         G C    SP+R+ 
Sbjct: 382 MDLKLELENWRTNFIELIATQKDCIKALNGWLLRCLLYEPDPEETPNGGCPPPFSPERIG 441

Query: 61  SPLPSLRTRARRNPQHRLSAALLSGQNRRPACVRNRPPLALEQQSSDLQRLAFVNRDLEK 120
           +P   +      +     S   +S   +      ++   ALEQQS DLQRLA  N+DLEK
Sbjct: 442 APPVFVIGHLWSDTADTFSDKDVSEAIQGLVLKLDQ---ALEQQSLDLQRLALANKDLEK 501

Query: 121 KIKIKKTSNQGFEEKTMAVTAGTVHKVGKFSGCEIQMGLRQILVGLTRFCGDSIAAYEEL 165
           KIK+KKT+    EEKT+AV AGTVHKVGKFSGCEIQ+GLRQI VGLTRFCGDSI AYEEL
Sbjct: 502 KIKVKKTTTMNHEEKTVAVAAGTVHKVGKFSGCEIQLGLRQIFVGLTRFCGDSIKAYEEL 561

[Close]

BLAST of Lcy12g000970 vs. ExPASy TrEMBL
Match: A0A6J1G2P6 (nitrate regulatory gene2 protein-like OS=Cucurbita moschata OX=3662 GN=LOC111450252 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 6.1e-32
Identity = 94/187 (50.27%), Postives = 113/187 (60.43%), Query Frame = 0


Query: 1   MDLKLELKNWRSNFINLITTQK-------------------------GLCQ---SPQRLA 60
           MDLKLEL+NWRSNF+NLI TQK                         G C    SP R+ 
Sbjct: 384 MDLKLELENWRSNFVNLIATQKDCIKALNGWLLRCLLHEPEPEETPNGGCPPPFSPARIG 443

Query: 61  SPLPSLRTRARRNPQHRLSAALLSGQNRRPACVRNRPPLALEQQSSDLQRLAFVNRDLEK 120
           +P   +      +   + S   +S   +    V ++   ALEQQS DLQRLA  NRDLEK
Sbjct: 444 APPVFVIAYLWSDTAEKFSDKDVSEAIQG---VVSKLDEALEQQSWDLQRLALGNRDLEK 503

Query: 121 KIKIKKTSNQGFEEKTMAVTAGTVHKVGKFSGCEIQMGLRQILVGLTRFCGDSIAAYEEL 160
           KIK KK + +  E+ T AV AGTVHKVGKF+GCEIQ G+RQ+LVGLTRFCGDSI AYEEL
Sbjct: 504 KIKAKKMNQEIEEKTTAAVAAGTVHKVGKFNGCEIQQGVRQVLVGLTRFCGDSITAYEEL 563

[Close]

BLAST of Lcy12g000970 vs. ExPASy TrEMBL
Match: A0A6J1KG49 (nitrate regulatory gene2 protein-like OS=Cucurbita maxima OX=3661 GN=LOC111493949 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 1.4e-31
Identity = 93/187 (49.73%), Postives = 113/187 (60.43%), Query Frame = 0


Query: 1   MDLKLELKNWRSNFINLITTQK-------------------------GLCQ---SPQRLA 60
           MDLKLEL+NWRSNF+NLI TQK                         G C    SP R+ 
Sbjct: 386 MDLKLELENWRSNFVNLIATQKDCIKALNGWLLRCLLHEPEPEETPNGGCPPPFSPARIG 445

Query: 61  SPLPSLRTRARRNPQHRLSAALLSGQNRRPACVRNRPPLALEQQSSDLQRLAFVNRDLEK 120
           +P   +      +   + S   +S   +    V ++   ALEQQS DLQRL+  NRDLEK
Sbjct: 446 APPVFVIAYLWSDTAEKFSDKDVSEAIQG---VVSKLDEALEQQSWDLQRLSLGNRDLEK 505

Query: 121 KIKIKKTSNQGFEEKTMAVTAGTVHKVGKFSGCEIQMGLRQILVGLTRFCGDSIAAYEEL 160
           KIK KK + +  E+ T AV AGTVHKVGKF+GCEIQ G+RQ+ VGLTRFCGDSIAAYEEL
Sbjct: 506 KIKAKKMNQEIEEKTTAAVAAGTVHKVGKFNGCEIQQGVRQVFVGLTRFCGDSIAAYEEL 565

[Close]

BLAST of Lcy12g000970 vs. NCBI nr
Match: XP_004144227.2 (nitrate regulatory gene2 protein isoform X1 [Cucumis sativus])

HSP 1 Score: 162.5 bits (410), Expect = 3.8e-36
Identity = 101/197 (51.27%), Postives = 121/197 (61.42%), Query Frame = 0


Query: 1   MDLKLELKNWRSNFINLITTQK-------------------------GLCQ---SPQRLA 60
           MDLKLEL+NWR+NFI LI TQK                         G C    SP+R+ 
Sbjct: 391 MDLKLELENWRTNFIELIATQKDCIKALNGWLLRCLLYEPDPEETPNGGCPPPFSPERIG 450

Query: 61  SPLPSLRTRARRNPQHRLSAALLSGQNRRPACVRNRPPLALEQQSSDLQRLAFVNRDLEK 120
           +P   +      +   + S   +S   +      ++   ALEQQS DLQRLA  N+DLEK
Sbjct: 451 APPVFVIGHLWSDTADKFSEKDVSEAMQGLVLKLDQ---ALEQQSLDLQRLALTNKDLEK 510

Query: 121 KIKIKK--TSNQGFEEKTMAVTAGTVHKVGKFSGCEIQMGLRQILVGLTRFCGDSIAAYE 168
           KIK+KK  T NQGFEEKTMAV AGTVHKVGKFSGCEIQ+G+RQI VGLTRFCGDSI AYE
Sbjct: 511 KIKVKKKTTMNQGFEEKTMAVAAGTVHKVGKFSGCEIQLGMRQIFVGLTRFCGDSIKAYE 570

[Close]

BLAST of Lcy12g000970 vs. NCBI nr
Match: XP_011657352.1 (nitrate regulatory gene2 protein isoform X2 [Cucumis sativus] >KGN47552.1 hypothetical protein Csa_018979 [Cucumis sativus])

HSP 1 Score: 162.5 bits (410), Expect = 3.8e-36
Identity = 101/197 (51.27%), Postives = 121/197 (61.42%), Query Frame = 0


Query: 1   MDLKLELKNWRSNFINLITTQK-------------------------GLCQ---SPQRLA 60
           MDLKLEL+NWR+NFI LI TQK                         G C    SP+R+ 
Sbjct: 387 MDLKLELENWRTNFIELIATQKDCIKALNGWLLRCLLYEPDPEETPNGGCPPPFSPERIG 446

Query: 61  SPLPSLRTRARRNPQHRLSAALLSGQNRRPACVRNRPPLALEQQSSDLQRLAFVNRDLEK 120
           +P   +      +   + S   +S   +      ++   ALEQQS DLQRLA  N+DLEK
Sbjct: 447 APPVFVIGHLWSDTADKFSEKDVSEAMQGLVLKLDQ---ALEQQSLDLQRLALTNKDLEK 506

Query: 121 KIKIKK--TSNQGFEEKTMAVTAGTVHKVGKFSGCEIQMGLRQILVGLTRFCGDSIAAYE 168
           KIK+KK  T NQGFEEKTMAV AGTVHKVGKFSGCEIQ+G+RQI VGLTRFCGDSI AYE
Sbjct: 507 KIKVKKKTTMNQGFEEKTMAVAAGTVHKVGKFSGCEIQLGMRQIFVGLTRFCGDSIKAYE 566

[Close]

BLAST of Lcy12g000970 vs. NCBI nr
Match: KAA0038463.1 (uncharacterized protein E6C27_scaffold119G00300 [Cucumis melo var. makuwa])

HSP 1 Score: 155.6 bits (392), Expect = 4.6e-34
Identity = 96/192 (50.00%), Postives = 117/192 (60.94%), Query Frame = 0


Query: 1   MDLKLELKNWRSNFINLITTQK-------------------------GLCQ---SPQRLA 60
           MDLKLEL+NWR+NFI LI TQK                         G C    SP+R+ 
Sbjct: 390 MDLKLELENWRTNFIELIATQKDCIKALNGWLLRCLLYEPDPEETPNGGCPPPFSPERIG 449

Query: 61  SPLPSLRTRARRNPQHRLSAALLSGQNRRPACVRNRPPLALEQQSSDLQRLAFVNRDLEK 120
           +P   +      +   + S   +S   +      ++   ALEQQS DLQRLA  N+DLEK
Sbjct: 450 APPVFVIGHLWSDTADKFSDKDVSEAIQGLVLKLDQ---ALEQQSLDLQRLALANKDLEK 509

Query: 121 KIKIKKTSNQGFEEKTMAVTAGTVHKVGKFSGCEIQMGLRQILVGLTRFCGDSIAAYEEL 165
           KIK+KKT+    EEKT+AV AGTVHKVGKFSGCEIQ+GLRQI VGLTRFCGDSI AYEEL
Sbjct: 510 KIKVKKTTTMNHEEKTVAVAAGTVHKVGKFSGCEIQLGLRQIFVGLTRFCGDSIKAYEEL 569

[Close]

BLAST of Lcy12g000970 vs. NCBI nr
Match: XP_008464870.1 (PREDICTED: uncharacterized protein LOC103502634 [Cucumis melo])

HSP 1 Score: 154.5 bits (389), Expect = 1.0e-33
Identity = 96/192 (50.00%), Postives = 116/192 (60.42%), Query Frame = 0


Query: 1   MDLKLELKNWRSNFINLITTQK-------------------------GLCQ---SPQRLA 60
           MDLKLEL+NWR+NFI LI TQK                         G C    SP+R+ 
Sbjct: 382 MDLKLELENWRTNFIELIATQKDCIKALNGWLLRCLLYEPDPEETPNGGCPPPFSPERIG 441

Query: 61  SPLPSLRTRARRNPQHRLSAALLSGQNRRPACVRNRPPLALEQQSSDLQRLAFVNRDLEK 120
           +P   +      +     S   +S   +      ++   ALEQQS DLQRLA  N+DLEK
Sbjct: 442 APPVFVIGHLWSDTADTFSDKDVSEAIQGLVLKLDQ---ALEQQSLDLQRLALANKDLEK 501

Query: 121 KIKIKKTSNQGFEEKTMAVTAGTVHKVGKFSGCEIQMGLRQILVGLTRFCGDSIAAYEEL 165
           KIK+KKT+    EEKT+AV AGTVHKVGKFSGCEIQ+GLRQI VGLTRFCGDSI AYEEL
Sbjct: 502 KIKVKKTTTMNHEEKTVAVAAGTVHKVGKFSGCEIQLGLRQIFVGLTRFCGDSIKAYEEL 561

[Close]

BLAST of Lcy12g000970 vs. NCBI nr
Match: XP_038884529.1 (nitrate regulatory gene2 protein-like [Benincasa hispida])

HSP 1 Score: 154.5 bits (389), Expect = 1.0e-33
Identity = 99/193 (51.30%), Postives = 118/193 (61.14%), Query Frame = 0


Query: 1   MDLKLELKNWRSNFINLITTQK-------------------------GLCQ---SPQRLA 60
           MDLKLEL+NWRSNFI+LI TQK                         G C    SP R+ 
Sbjct: 390 MDLKLELENWRSNFIDLIATQKDCIKALNGWLLRCLLYEPEPEETPNGGCPPPFSPARIG 449

Query: 61  SPLPSLRTRARRNPQHRLSAALLSGQNRRPACVRNRPPLALEQQSSDLQRLAFVNRDLEK 120
           +P   +      +   R S   +S   +    + ++   ALEQQS DLQRLA  N+DLEK
Sbjct: 450 APPVFVIGHLWSDTTERFSDKDVSEAIQG---LVSKLDQALEQQSWDLQRLALANKDLEK 509

Query: 121 KIKIKKT--SNQGFEEKTMAVTAGTVHKVGKFSGCEIQMGLRQILVGLTRFCGDSIAAYE 164
           KIK+KKT  +NQGFEEKTMAV AGTVHKVGKFSG EIQ+GLRQI VGLT FCGD+I  YE
Sbjct: 510 KIKVKKTTATNQGFEEKTMAVAAGTVHKVGKFSGSEIQLGLRQIFVGLTGFCGDAITVYE 569

The following BLAST results are available for this feature:

BLAST of Lcy12g000970 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy12g000970 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGR7	1.8e-36	51.27	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G358160 PE=4 SV=1	[more]
A0A5A7T6A4	2.2e-34	50.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3CP29	5.0e-34	50.00	uncharacterized protein LOC103502634 OS=Cucumis melo OX=3656 GN=LOC103502634 PE=...	[more]
A0A6J1G2P6	6.1e-32	50.27	nitrate regulatory gene2 protein-like OS=Cucurbita moschata OX=3662 GN=LOC111450...	[more]
A0A6J1KG49	1.4e-31	49.73	nitrate regulatory gene2 protein-like OS=Cucurbita maxima OX=3661 GN=LOC11149394...	[more]

BLAST of Lcy12g000970 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144227.2	3.8e-36	51.27	nitrate regulatory gene2 protein isoform X1 [Cucumis sativus]	[more]
XP_011657352.1	3.8e-36	51.27	nitrate regulatory gene2 protein isoform X2 [Cucumis sativus] >KGN47552.1 hypoth...	[more]
KAA0038463.1	4.6e-34	50.00	uncharacterized protein E6C27_scaffold119G00300 [Cucumis melo var. makuwa]	[more]
XP_008464870.1	1.0e-33	50.00	PREDICTED: uncharacterized protein LOC103502634 [Cucumis melo]	[more]
XP_038884529.1	1.0e-33	51.30	nitrate regulatory gene2 protein-like [Benincasa hispida]	[more]

BLAST of Lcy12g000970 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 87..107
None	No IPR available	PANTHER	PTHR21450	UNCHARACTERIZED	coord: 72..165
None	No IPR available	PANTHER	PTHR21450:SF19	F5M15.15	coord: 72..165

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy12g000970.1	Lcy12g000970.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006310	DNA recombination
biological_process	GO:0032196	transposition
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding