Lcy11g020070 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g020070
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	ATP-dependent Clp protease proteolytic subunit
Location	Chr11: 47729701 .. 47734708 (-)
RNA-Seq Expression	Lcy11g020070
Synteny	Lcy11g020070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTTTTGTATTTCTCACCCAACCAAATCCCCAAAGCCATCGTCTCTCCGCTTCTTCCTGGTTTCAGAGCTGAAGCAGAGCAGTGCTGTAAATCCATGGAGCTTCTTTCACGCTGTTCTACTCTCATTCCTCACGCCTCCTCTCTTGGCCTTCCGAATTCTCATGGAAAACCATCAAATTTCTATCCCAAACTCAAATCCAGTCTCTCCTTTCCTTCGTCTTCGTCAGTCCTCAAAGCAACCGCTCTTAAACCCTCGAGAACCCTAGCTCCGCCGTTCTCCGTCCTCATGACGTCTCCACAGACGCCGGATGCCGCCCGGAGAGGCGCCGAGTCTGACGCCATGGGACTGCTTCTCAGGGAGAGGATCGTCTTCTTGGGGAACAGCGTCGATGACTTTGTGGCTGATGCCATTATCAGCCAGCTCTTGCTCTTGGATGCTCAGGATTCTACTAAGGATATCAGACTCTTCATTAATTCCCCCGGTGGCTCTCTCAGGTATGCACGGGCTGATTTTTTTTGTGCATAATACAGTTAGTGAAGATATGGAATATGAGATTTAGGCTCATTTTGATTCTTTCTAACCGAATTAGGTCATTGAATTTCTAGTAATATGCGTTTACGGCTAATTTTAATGTGGAATGAACGCATATGTTTTCCTCCGTGCGCTGAATGCAAGAGTTAGCCTACGTTACTTGAACTCTGCTTAGCACAATTCTCTGTAAAGATCTAGAATTCTTCACCTGCACCATGAACAGATAGCCTACCATTGGGTGTACCTATCCGGGATAAGTCGGGTCACTGTAAATTTAGGATTTGTTACAGTTCACTGAAAATCGAATTGAAAATAATTTATATTATCTAGCAATACTCATGTAATGTACAGTGCGCTATCAATGGAAATGCTTCTGAATGATAAAAGTTATATAAACATCCAACATTGAAATTATTTAAAATTAGAAAGAACCGATTGTTTGAGAGTTAGTCTTCCTTGTTACTTGGAACTGGGCTGGTCCTCTTATTTCCTTGGGTGGTTTGGGAGTTGGTAATGTGAGGACTAGAAACACCGCCCTTCTCTCAAAGTGGATGTGTTGTGTTCGTATTCTTGTGTGAAAGGAACGCCCTTAGACGAGGCTTAATCAAGAGTCAAAATGGGATTGGCAACCTTTGGAGAAACTTAAGTCCTAGAATTGACATAGCTAGAACGAGAGGTTTCTTTAATCATGGTGTCTTCTTAAAGAATGGCAATGGTTGGAGGATTAAATTTTGGGCAGACGCATGGTTTGATCCTTTACGTTTAAGCCTGATTTTCCAAATATTCTATCTATTTCAAATGCTAAAGACTTCTCTTTAAGAGATTTTTGGAATGGGGCAGTCTAAATTTGAGATTTTCAGCTCAGAAGAAACCCTTCTGATAGAAAGCCAGAAGAATGGTCGATCTTTATTCAAAAGATGAAAAGCAATCAGCTAAATCTTAGTAAAAAATTTTGTGGGAAGTTTGAAACCTTTGGCTTGTTTCCTTGAAAATTTGCCAATCTACAGCTGAATAGTAGAGAAGGTAGGTTAGATAAACCCTTTTTTCTCTGATTTGGGGAGGAAAAGACTTAGTTCTTCCTTTGGGCCACGGCTTACAAGAGTCTAAACACTTGTGATTGAATTCAAAAGATGAACCTTTCCATGGCTTTATCTCCTGCTGTTTTCCCTGCTTATGTAAGGAAGAAGCCCTGGACCATCTTTTTATTCATATAGCAATATGTTGCACAAAATATTTACATGTGAAGAAACCCATTTCCTATAAGGACCAATTTCCCAAATCAGTACTCTTTTGGGAAAGGGCTAACAGTCCTCGTGAGAGAGTAAGCACGTTGGCAGATCTGAATTTTTTTTTTAACAATTAAACATCCAGGTTTCTTGTTCTTTCCCTATGATATTCTCAGTGGCAGATGATAAAGCCTAGAGGTGAAGTTTGAAGATACTAAAGTTTCCCTAATTACTAAAGTATGGTAGTAATGCAAATATTATCCATCTCTCTCCCTTTTCCTTTTTGGTATCTTTTGAATGACTTGCGAGGAATCATGAAAAAAAAAAATTTGAGAAATAGGAGAGTTCAGTGTCTTAACACAACATTCAGAATGTACGTTTTCAAAACATCTACATTCTATTATTCTAATAGTATCAAGTTTCACTTTGGGCTACATAACACTTGGTGCTACACCAGTACAAATTTATCTTGAAGTCAAGTAATCTATATATATAATGATGCAACCAATCATTTATAACTAGTTTATGCATTGGATCCAGAACTGATTATTTCTTTTCAAACTTCAATGGAGAAACATTGTCTCTTTGAGATTTTTCCTTTCTTTGGAGAGGGGATATGCCTCTTGGGCCACCACTGGGGAAATTTAATGCGCTTGGGTCTATGTCTAGAGATGAATGTATTTGTCTACTCTACTTTACGACATGAATGGGAAGATCAACAAACTGCGGGAAGACATACATATCTTTCCTGACTGTTTATTTAGGACCCGTTTGGTAACGTTCTCGTTGCTTGTTTCATGTTTTCAATTTTATTAAGAAATCTAAGCATTTAATAACTATGTATGTTTCTTGTTTCTCATTTTTTAGAAACACTCCCAAAATTTGTATAGAACTTTTGGGAACAACTAAAACTAGTTTCTCCTTTTTTGTTCTTGTTTCCATTTTTTTTCAAACATAAATAAGAATATAGGTTTATTATTATTGAATGTATAGGTGTTAGGGTCATGAAATTCTATTTTTCTTTATTAAAAATGAAGAAACGGAAACAAGAAACGAGAACGTTACCAAACGGGCCCTTAGTTTCTGTTTTATTCTTGTTTCCATGGTTTGCAGGGCCTTCTGTGTACATTAGGAAATCTTTTAGAGTGACCTAAGTTAGATTTCTGTGGCTTACAGATGACCTTTTCATGATCTTTTCTCCGCATCTTTGATTCACAACTACTTTCTAATGGTAAATATATCATTCACCACCAAACCAGTATTTTTTGAATTGTATATTTATATGTAACTACATAAGGATGCTTGTGGGAGGTGTCAGCAGAAGAATTTATTTACTCTGCCTAGCCCAGTTCATTTGTCAGAAAAGGTTATGTTTTTAAGTTCCATAGTGGTTTATCCTCATTTTGATTAAGGAACACACCTTCCAACTTTATAGCAATCCAAATCCAGTCTTCCAATTCTCTATAAACAGATTCCTTCTCAGCCCTGCCGTTGAGGATCCCACATTAAAAAAATGAGGGGACCTCACAATCTTTATAAGATACATGGGTTACTCCTCTCATTGCTAATTGATTTTGAGATGGAACATCATGTTTATCTATTATGGTATCAGAGCCCATGAAGCTAAACCAAGTATTTGGCCTAAGAAAAAAAAAAGAGATCCGACCTAAGAATGGTGAATCCAAAGAGGCACCATTTTGAGGGGCACGTTGAAGATCTCAAATTAAAAAGATGAGGAGACCTCACAATTTTTATAAGATACATGGGGTTACTCCTCTCATTGCCAATTGGTTTTGAGATGGAACCTCATGTTTATCTATTACCTATGTCTCAAGTTTGGGTGTCTTCTTTCAAGCAATCACTTATTATCTCTCCTTTTGTTCTAGCAATGGAGTTATGGATTAAATATTATGAAAGATCTTACTCAAATGATGGAGTGAACCCAGTTATCTTATTAGAATCTAATTCAAAGCCCATTTTCCAGTTAATGAAGCGAATGTTTTTCCTACAAAACCAGTACATTTAGCTAGATCAGGCAACGGGCTGAAGGCAGACCTGATTACATGGTTCTCTTTGTTTTACTCGACTCCAAGGACTTCAATTTTATTTCAACGTTGAGTTTATGAATTCCTAGTCATTATTTATTTGAAGCTGGAAATAGGGATTGAATTAGGCTTTTCTAATATTTACTCTGTTCATCCCTCTTCTGTCTTGGGAACTAAAGGTAGGACGTTCAGCTTTCAAAGAGTGACCACCCGATCTTGTAATTTTTTATCATATACATCAGCATTTTGAAAGTGGATGGCCTTAGTTAATATTGGTCATGTGTTGCAGTGCATTAACCCTAACTGATTTCCTTCTACTAATGCTATTTTGATTAGTGCTACAATGGCTATCTACGACGTCGTACAGCTCGTGAGGGCTGATGTCTCTACAATTGCACTAGGCATTGCAGCCTCAACAGCTTCCATAATCCTTGGCGGTGGCACTAAAGGAAAGCGTCTCGCAATGCCTAATGCACGTATTATGGTTCATCAACCTCTTGGAGGGGCGAGTGGCCAAGCAATAGATGTGGAAATACAAGCACGTGAAATCATGCATAACAAGAACAACGTAACAAGAATTATCTCTGAATTCACTGGCCATCCATTTGAAAAGGTCCAAAAAGACATCGATCGGGATCGTTATATGTCCCCCATAGAGGCTGTTGAATATGGATTGATTGATGGAGTGATCGACAAAGACAGCATTATACCTCTTGTGCCAGTGCCAGAAAGAGTGAAAGCAAGTTTAAATTATGAAGAAATTAGTAAAGATCCCAGAAAATTCTTGACACCAGATGTCCCTGATGACGAGATATACTAGTTCCGGGCGTTTCGCGAACGTTTCTCTAGGCTTTTGATTTATATGATTCACATGTAGAATCTTATGTAAGCAAAGTCATGGTAAGTGGAACCCAGAAATATGCTTGAACATGATGTGCTAATCAGCTTTAGAGTATCAACTTTGAGCAAAACGTCTCTACTTACCAGAAGTAAAAGGTATTGGGAATTTGGACTCTTTTTTGTCTCTGACATTTTCAAATGAGCATTCTGAGAAAAGTAAATTTGGCATTGAATTATTTTGTATTAGCAGTGTATATTTCATACCTTTGTTTGATTAATCTCTTCTCCAATCCGCAAATGACACGTGTCCTTTGTTCAAATTAACAGAAGTCTTGAAATGTTAAACTGAATATTTGATGACTTT

mRNA sequence

CATTTTTGTATTTCTCACCCAACCAAATCCCCAAAGCCATCGTCTCTCCGCTTCTTCCTGGTTTCAGAGCTGAAGCAGAGCAGTGCTGTAAATCCATGGAGCTTCTTTCACGCTGTTCTACTCTCATTCCTCACGCCTCCTCTCTTGGCCTTCCGAATTCTCATGGAAAACCATCAAATTTCTATCCCAAACTCAAATCCAGTCTCTCCTTTCCTTCGTCTTCGTCAGTCCTCAAAGCAACCGCTCTTAAACCCTCGAGAACCCTAGCTCCGCCGTTCTCCGTCCTCATGACGTCTCCACAGACGCCGGATGCCGCCCGGAGAGGCGCCGAGTCTGACGCCATGGGACTGCTTCTCAGGGAGAGGATCGTCTTCTTGGGGAACAGCGTCGATGACTTTGTGGCTGATGCCATTATCAGCCAGCTCTTGCTCTTGGATGCTCAGGATTCTACTAAGGATATCAGACTCTTCATTAATTCCCCCGGTGGCTCTCTCAGTGCTACAATGGCTATCTACGACGTCGTACAGCTCGTGAGGGCTGATGTCTCTACAATTGCACTAGGCATTGCAGCCTCAACAGCTTCCATAATCCTTGGCGGTGGCACTAAAGGAAAGCGTCTCGCAATGCCTAATGCACGTATTATGGTTCATCAACCTCTTGGAGGGGCGAGTGGCCAAGCAATAGATGTGGAAATACAAGCACGTGAAATCATGCATAACAAGAACAACGTAACAAGAATTATCTCTGAATTCACTGGCCATCCATTTGAAAAGGTCCAAAAAGACATCGATCGGGATCGTTATATGTCCCCCATAGAGGCTGTTGAATATGGATTGATTGATGGAGTGATCGACAAAGACAGCATTATACCTCTTGTGCCAGTGCCAGAAAGAGTGAAAGCAAGTTTAAATTATGAAGAAATTAGTAAAGATCCCAGAAAATTCTTGACACCAGATGTCCCTGATGACGAGATATACTAGTTCCGGGCGTTTCGCGAACGTTTCTCTAGGCTTTTGATTTATATGATTCACATGTAGAATCTTATGTAAGCAAAGTCATGGTAAGTGGAACCCAGAAATATGCTTGAACATGATGTGCTAATCAGCTTTAGAGTATCAACTTTGAGCAAAACGTCTCTACTTACCAGAAGTAAAAGGTATTGGGAATTTGGACTCTTTTTTGTCTCTGACATTTTCAAATGAGCATTCTGAGAAAAGTAAATTTGGCATTGAATTATTTTGTATTAGCAGTGTATATTTCATACCTTTGTTTGATTAATCTCTTCTCCAATCCGCAAATGACACGTGTCCTTTGTTCAAATTAACAGAAGTCTTGAAATGTTAAACTGAATATTTGATGACTTT

Coding sequence (CDS)

ATGGAGCTTCTTTCACGCTGTTCTACTCTCATTCCTCACGCCTCCTCTCTTGGCCTTCCGAATTCTCATGGAAAACCATCAAATTTCTATCCCAAACTCAAATCCAGTCTCTCCTTTCCTTCGTCTTCGTCAGTCCTCAAAGCAACCGCTCTTAAACCCTCGAGAACCCTAGCTCCGCCGTTCTCCGTCCTCATGACGTCTCCACAGACGCCGGATGCCGCCCGGAGAGGCGCCGAGTCTGACGCCATGGGACTGCTTCTCAGGGAGAGGATCGTCTTCTTGGGGAACAGCGTCGATGACTTTGTGGCTGATGCCATTATCAGCCAGCTCTTGCTCTTGGATGCTCAGGATTCTACTAAGGATATCAGACTCTTCATTAATTCCCCCGGTGGCTCTCTCAGTGCTACAATGGCTATCTACGACGTCGTACAGCTCGTGAGGGCTGATGTCTCTACAATTGCACTAGGCATTGCAGCCTCAACAGCTTCCATAATCCTTGGCGGTGGCACTAAAGGAAAGCGTCTCGCAATGCCTAATGCACGTATTATGGTTCATCAACCTCTTGGAGGGGCGAGTGGCCAAGCAATAGATGTGGAAATACAAGCACGTGAAATCATGCATAACAAGAACAACGTAACAAGAATTATCTCTGAATTCACTGGCCATCCATTTGAAAAGGTCCAAAAAGACATCGATCGGGATCGTTATATGTCCCCCATAGAGGCTGTTGAATATGGATTGATTGATGGAGTGATCGACAAAGACAGCATTATACCTCTTGTGCCAGTGCCAGAAAGAGTGAAAGCAAGTTTAAATTATGAAGAAATTAGTAAAGATCCCAGAAAATTCTTGACACCAGATGTCCCTGATGACGAGATATACTAG

Protein sequence

MELLSRCSTLIPHASSLGLPNSHGKPSNFYPKLKSSLSFPSSSSVLKATALKPSRTLAPPFSVLMTSPQTPDAARRGAESDAMGLLLRERIVFLGNSVDDFVADAIISQLLLLDAQDSTKDIRLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY

Homology

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BLAST of Lcy11g020070 vs. ExPASy Swiss-Prot
Match: Q94B60 (ATP-dependent Clp protease proteolytic subunit 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPP4 PE=1 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 1.4e-103
Identity = 209/283 (73.85%), Postives = 230/283 (81.27%), Query Frame = 0


Query: 25  KPSNFYPKLKSSLSFPSSSSVLKAT--ALKPSRTLAPPFSVLMTSP-----------QTP 84
           KPS    +L SS S  SSSS  K     LKP++ ++PP      SP           QT 
Sbjct: 11  KPSLVSSRLNSS-SSASSSSFPKPNNLYLKPTKLISPPLRTTSPSPLRFANASIEMSQTQ 70

Query: 85  DAARRGAESDAMGLLLRERIVFLGNSVDDFVADAIISQLLLLDAQDSTKDIRLFINSPGG 144
           ++A RGAESD MGLLLRERIVFLG+S+DDFVADAI+SQLLLLDA+D  KDI+LFINSPGG
Sbjct: 71  ESAIRGAESDVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFINSPGG 130

Query: 145 SLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGA 204
           SLSATMAIYDVVQLVRADVSTIALGIAASTASIILG GTKGKR AMPN RIM+HQPLGGA
Sbjct: 131 SLSATMAIYDVVQLVRADVSTIALGIAASTASIILGAGTKGKRFAMPNTRIMIHQPLGGA 190

Query: 205 SGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGV 264
           SGQAIDVEIQA+E+MHNKNNVT II+  T   FE+V KDIDRDRYMSPIEAVEYGLIDGV
Sbjct: 191 SGQAIDVEIQAKEVMHNKNNVTSIIAGCTSRSFEQVLKDIDRDRYMSPIEAVEYGLIDGV 250

Query: 265 IDKDSIIPLVPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 295
           ID DSIIPL PVP+RVK  +NYEEISKDP KFLTP++PDDEIY
Sbjct: 251 IDGDSIIPLEPVPDRVKPRVNYEEISKDPMKFLTPEIPDDEIY 292

[Close]

BLAST of Lcy11g020070 vs. ExPASy Swiss-Prot
Match: Q3ANI8 (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain CC9605) OX=110662 GN=clpP1 PE=3 SV=2)

HSP 1 Score: 216.9 bits (551), Expect = 3.2e-55
Identity = 108/195 (55.38%), Postives = 145/195 (74.36%), Query Frame = 0


Query: 60  PFSVLMTSPQTPDAARRGAES-DAMGLLLRERIVFLGNSVDDFVADAIISQLLLLDAQDS 119
           P S     P   + + RG  + D    LLRERI+FLG  VDD VADA+++Q+L L+A+D 
Sbjct: 2   PVSAPGPLPTVVEQSGRGDRAFDIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDP 61

Query: 120 TKDIRLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMP 179
            KDI+++INSPGGS++A +AIYD +Q V  DV TI  G+AAS  + +L GGTKGKRLA+P
Sbjct: 62  EKDIQIYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALP 121

Query: 180 NARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMS 239
           NARIM+HQPLGGA GQA+D+EIQA+EI++ K  +  +++E TG P +K+ +D DRD ++S
Sbjct: 122 NARIMIHQPLGGAQGQAVDIEIQAKEILYLKETLNGLMAEHTGQPLDKISEDTDRDYFLS 181

Query: 240 PIEAVEYGLIDGVID 254
           P EAVEYGLID V+D
Sbjct: 182 PAEAVEYGLIDRVVD 196

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BLAST of Lcy11g020070 vs. ExPASy Swiss-Prot
Match: Q3B0U1 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain CC9902) OX=316279 GN=clpP2 PE=3 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 5.4e-55
Identity = 107/195 (54.87%), Postives = 144/195 (73.85%), Query Frame = 0


Query: 60  PFSVLMTSPQTPDAARRGAES-DAMGLLLRERIVFLGNSVDDFVADAIISQLLLLDAQDS 119
           P S     P   + + RG  + D    LLRERI+FLG  VDD VADA+++Q+L L+A+D 
Sbjct: 2   PISAPGPLPTVVEQSGRGDRAFDIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDP 61

Query: 120 TKDIRLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMP 179
            KDI++++NSPGGS++A +AIYD +Q V  DV TI  G+AAS  + +L GGTKGKRLA+P
Sbjct: 62  EKDIQIYVNSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALP 121

Query: 180 NARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMS 239
           NARIM+HQPLGGA GQA+D+EIQA+EI+  K  +  +++E TG P +K+ +D DRD ++S
Sbjct: 122 NARIMIHQPLGGAQGQAVDIEIQAKEILFLKETLNGLLAEHTGQPLDKISEDTDRDYFLS 181

Query: 240 PIEAVEYGLIDGVID 254
           P EAVEYGLID V+D
Sbjct: 182 PAEAVEYGLIDRVVD 196

[Close]

BLAST of Lcy11g020070 vs. ExPASy Swiss-Prot
Match: Q7V992 (ATP-dependent Clp protease proteolytic subunit 1 OS=Prochlorococcus marinus (strain MIT 9313) OX=74547 GN=clpP1 PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 4.5e-54
Identity = 105/187 (56.15%), Postives = 141/187 (75.40%), Query Frame = 0


Query: 68  PQTPDAARRGAES-DAMGLLLRERIVFLGNSVDDFVADAIISQLLLLDAQDSTKDIRLFI 127
           P   + + RG  + D    LLRERI+FLG  VDD VADA+++Q+L L+A+D  KDI+++I
Sbjct: 27  PTVVEQSGRGERAFDIYSRLLRERIIFLGTGVDDQVADALVAQMLFLEAEDPEKDIQIYI 86

Query: 128 NSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQ 187
           NSPGGS++A +AIYD +Q V  DV TI  G+AAS  + +L GGTKGKRLA+PNARIM+HQ
Sbjct: 87  NSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLCGGTKGKRLALPNARIMIHQ 146

Query: 188 PLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYG 247
           PLGGA GQA+D+EIQA+EI+  K  +  +++E TG P  K+ +D DRD ++SP +AVEYG
Sbjct: 147 PLGGAQGQAVDIEIQAKEILFLKETLNGLLAEHTGQPLNKIAEDTDRDHFLSPAKAVEYG 206

Query: 248 LIDGVID 254
           LID V+D
Sbjct: 207 LIDRVVD 213

[Close]

BLAST of Lcy11g020070 vs. ExPASy Swiss-Prot
Match: O34125 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=clpP2 PE=3 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 7.8e-54
Identity = 105/191 (54.97%), Postives = 145/191 (75.92%), Query Frame = 0


Query: 68  PQTPDAARRGAES-DAMGLLLRERIVFLGNSVDDFVADAIISQLLLLDAQDSTKDIRLFI 127
           P   + + RG  + D    LLRERIVFLG  VDD VAD+I++QLL L+A+D  KDI+L+I
Sbjct: 39  PTVVEQSGRGERAFDIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPEKDIQLYI 98

Query: 128 NSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQ 187
           NSPGGS++A MAIYD +Q V  DV+TI  G+AAS  + +L GG +GKR+A+P+ARIM+HQ
Sbjct: 99  NSPGGSVTAGMAIYDTMQQVAPDVATICFGLAASMGAFLLSGGAQGKRMALPSARIMIHQ 158

Query: 188 PLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYG 247
           PLGGA GQA+D+EIQAREI+++K+ +  ++++ TG P EK++ D DRD +MSP EA  YG
Sbjct: 159 PLGGAQGQAVDIEIQAREILYHKSTLNDLLAQHTGQPLEKIEVDTDRDFFMSPEEAKAYG 218

Query: 248 LIDGVIDKDSI 258
           LID V+ + ++
Sbjct: 219 LIDQVLTRPTM 229

[Close]

BLAST of Lcy11g020070 vs. ExPASy TrEMBL
Match: A0A6J1CWB9 (ATP-dependent Clp protease proteolytic subunit OS=Momordica charantia OX=3673 GN=LOC111014827 PE=3 SV=1)

HSP 1 Score: 538.9 bits (1387), Expect = 1.3e-149
Identity = 281/294 (95.58%), Postives = 287/294 (97.62%), Query Frame = 0


Query: 1   MELLSRCSTLIPHASSLGLPNSHGKPSNFYPKLKSSLSFPSSSSVLKATALKPSRTLAPP 60
           MELLSRCSTLIPHASSL LPNSH KPSNFYPKLKSSLSFPS+ SVLKATALKPSRTLA P
Sbjct: 1   MELLSRCSTLIPHASSLSLPNSHPKPSNFYPKLKSSLSFPSACSVLKATALKPSRTLASP 60

Query: 61  FSVLMTSPQTPDAARRGAESDAMGLLLRERIVFLGNSVDDFVADAIISQLLLLDAQDSTK 120
            SVLMT+PQTPD ARRGAE+DAMGLLLRERIVFLGNS+DDFVADAIISQLLLLDAQDSTK
Sbjct: 61  CSVLMTAPQTPDVARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120

Query: 121 DIRLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180
           DIRLFINSPGGSLSATMAIYDVVQLVRADVSTI LGIAASTASIILGGGTKGKRLAMPNA
Sbjct: 121 DIRLFINSPGGSLSATMAIYDVVQLVRADVSTIGLGIAASTASIILGGGTKGKRLAMPNA 180

Query: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI 240
           RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPF+KVQKDIDRDRYMSPI
Sbjct: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFDKVQKDIDRDRYMSPI 240

Query: 241 EAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 295
           EAVEYGLIDGVIDKDSIIPL+PVPERVKASLNYEEISKDPRKFLTPDVPDDEIY
Sbjct: 241 EAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 294

[Close]

BLAST of Lcy11g020070 vs. ExPASy TrEMBL
Match: A0A1S3BJF4 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103490719 PE=3 SV=1)

HSP 1 Score: 531.6 bits (1368), Expect = 2.1e-147
Identity = 278/294 (94.56%), Postives = 288/294 (97.96%), Query Frame = 0


Query: 1   MELLSRCSTLIPHASSLGLPNSHGKPSNFYPKLKSSLSFPSSSSVLKATALKPSRTLAPP 60
           MELLSRCSTLIP ASSLGLPNSHGKPSNF+PKLKS+LSFPS+SSVLK TALKPSRTL PP
Sbjct: 1   MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP 60

Query: 61  FSVLMTSPQTPDAARRGAESDAMGLLLRERIVFLGNSVDDFVADAIISQLLLLDAQDSTK 120
            SV MT+PQTPDA+RRGAE+DAMGLLLRERIVFLGNS+DDFVADAIISQLLLLDAQDSTK
Sbjct: 61  CSV-MTAPQTPDASRRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120

Query: 121 DIRLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180
           DIRLFINS GGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA
Sbjct: 121 DIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180

Query: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI 240
           RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI
Sbjct: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI 240

Query: 241 EAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 295
           EAVEYGLIDGVID+DSIIPLVPVPERVKA+LNYEE+SKDPRKFLTPDVPDDEIY
Sbjct: 241 EAVEYGLIDGVIDRDSIIPLVPVPERVKATLNYEEMSKDPRKFLTPDVPDDEIY 293

[Close]

BLAST of Lcy11g020070 vs. ExPASy TrEMBL
Match: A0A6J1EC18 (ATP-dependent Clp protease proteolytic subunit OS=Cucurbita moschata OX=3662 GN=LOC111431188 PE=3 SV=1)

HSP 1 Score: 526.9 bits (1356), Expect = 5.3e-146
Identity = 277/294 (94.22%), Postives = 284/294 (96.60%), Query Frame = 0


Query: 1   MELLSRCSTLIPHASSLGLPNSHGKPSNFYPKLKSSLSFPSSSSVLKATALKPSRTLAPP 60
           MELLSRCSTLIPHASSLGL NSHGKPSNFYPKLKSSLSFPS+SSVLK TA KPSRTLA  
Sbjct: 48  MELLSRCSTLIPHASSLGLLNSHGKPSNFYPKLKSSLSFPSASSVLKTTARKPSRTLATS 107

Query: 61  FSVLMTSPQTPDAARRGAESDAMGLLLRERIVFLGNSVDDFVADAIISQLLLLDAQDSTK 120
            SV MT PQTPDAA+RGAE+DAMGLLLRERIVFLGNS+DDFVADAIISQLLLLDAQDSTK
Sbjct: 108 CSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 167

Query: 121 DIRLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180
           DIRLFINS GGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA
Sbjct: 168 DIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 227

Query: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI 240
           RIMVHQPLGGASGQAIDVEIQAREIMHNKNN+TRIISEFTGHPFEKVQKDIDRDRYMSPI
Sbjct: 228 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPI 287

Query: 241 EAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 295
           EAVEYGLIDGVIDKDSIIPLVPVPERVKASLNY EISKDP+KFL+PDVPDDEIY
Sbjct: 288 EAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKFLSPDVPDDEIY 341

[Close]

BLAST of Lcy11g020070 vs. ExPASy TrEMBL
Match: A0A6J1HNH6 (ATP-dependent Clp protease proteolytic subunit OS=Cucurbita maxima OX=3661 GN=LOC111465249 PE=3 SV=1)

HSP 1 Score: 523.5 bits (1347), Expect = 5.8e-145
Identity = 274/294 (93.20%), Postives = 282/294 (95.92%), Query Frame = 0


Query: 1   MELLSRCSTLIPHASSLGLPNSHGKPSNFYPKLKSSLSFPSSSSVLKATALKPSRTLAPP 60
           MELLSRCSTLIPHASSLGL NSHGKPSNFYPKLKS LSFPS+SSVLK TA KPSRTLA  
Sbjct: 1   MELLSRCSTLIPHASSLGLLNSHGKPSNFYPKLKSGLSFPSASSVLKTTARKPSRTLATS 60

Query: 61  FSVLMTSPQTPDAARRGAESDAMGLLLRERIVFLGNSVDDFVADAIISQLLLLDAQDSTK 120
            SV MT PQTPDAA+RGAE+DAMGLLLRERIVFLGNS+DDFVADAIISQLLLLDAQDSTK
Sbjct: 61  SSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120

Query: 121 DIRLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180
           DIRLFINS GGSLSATMAIYDV+QLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA
Sbjct: 121 DIRLFINSSGGSLSATMAIYDVIQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180

Query: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI 240
           RIMVHQPLGGASGQAIDVEIQAREIMHNKNN+TRIISEFTGHPFEKVQKDIDRDRYMSPI
Sbjct: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPI 240

Query: 241 EAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 295
           EAVEYGLIDGVIDKDSIIPLVPVPERVKASLNY EISKDP+KF +PDVPDDEIY
Sbjct: 241 EAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKFFSPDVPDDEIY 294

[Close]

BLAST of Lcy11g020070 vs. ExPASy TrEMBL
Match: A0A6J1FAG6 (ATP-dependent Clp protease proteolytic subunit OS=Cucurbita moschata OX=3662 GN=LOC111443555 PE=3 SV=1)

HSP 1 Score: 514.6 bits (1324), Expect = 2.7e-142
Identity = 267/294 (90.82%), Postives = 281/294 (95.58%), Query Frame = 0


Query: 1   MELLSRCSTLIPHASSLGLPNSHGKPSNFYPKLKSSLSFPSSSSVLKATALKPSRTLAPP 60
           MELLSRCSTL+PHAS+L LPNSHGK S FYPK KSSLSFPSSSSVLKATALKPSRTLAPP
Sbjct: 1   MELLSRCSTLVPHASTLSLPNSHGKSSVFYPKRKSSLSFPSSSSVLKATALKPSRTLAPP 60

Query: 61  FSVLMTSPQTPDAARRGAESDAMGLLLRERIVFLGNSVDDFVADAIISQLLLLDAQDSTK 120
            SVLMT+PQTPD+AR GAE+DAMGLLLRERIVFLGN++DDFVADAIISQLLLLDAQDSTK
Sbjct: 61  CSVLMTTPQTPDSARTGAETDAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQDSTK 120

Query: 121 DIRLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180
           DIRLFINS GGSLSATMAI DV+QLVRADVSTIALGIAASTASIILGGGTKGKR AMPNA
Sbjct: 121 DIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNA 180

Query: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI 240
           RIMVHQPLGG SGQAIDVEIQAREIMHNKNN+ RIIS +TGHPFEKVQKDIDRDRYMSPI
Sbjct: 181 RIMVHQPLGGTSGQAIDVEIQAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPI 240

Query: 241 EAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 295
           EAVEYGLIDGVIDKD+IIPL+ +PERVKA+LNYEEISKDPRKFLTPDVPDDEIY
Sbjct: 241 EAVEYGLIDGVIDKDTIIPLMQLPERVKATLNYEEISKDPRKFLTPDVPDDEIY 294

[Close]

BLAST of Lcy11g020070 vs. NCBI nr
Match: XP_022145352.1 (ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Momordica charantia])

HSP 1 Score: 538.9 bits (1387), Expect = 2.8e-149
Identity = 281/294 (95.58%), Postives = 287/294 (97.62%), Query Frame = 0


Query: 1   MELLSRCSTLIPHASSLGLPNSHGKPSNFYPKLKSSLSFPSSSSVLKATALKPSRTLAPP 60
           MELLSRCSTLIPHASSL LPNSH KPSNFYPKLKSSLSFPS+ SVLKATALKPSRTLA P
Sbjct: 1   MELLSRCSTLIPHASSLSLPNSHPKPSNFYPKLKSSLSFPSACSVLKATALKPSRTLASP 60

Query: 61  FSVLMTSPQTPDAARRGAESDAMGLLLRERIVFLGNSVDDFVADAIISQLLLLDAQDSTK 120
            SVLMT+PQTPD ARRGAE+DAMGLLLRERIVFLGNS+DDFVADAIISQLLLLDAQDSTK
Sbjct: 61  CSVLMTAPQTPDVARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120

Query: 121 DIRLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180
           DIRLFINSPGGSLSATMAIYDVVQLVRADVSTI LGIAASTASIILGGGTKGKRLAMPNA
Sbjct: 121 DIRLFINSPGGSLSATMAIYDVVQLVRADVSTIGLGIAASTASIILGGGTKGKRLAMPNA 180

Query: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI 240
           RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPF+KVQKDIDRDRYMSPI
Sbjct: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFDKVQKDIDRDRYMSPI 240

Query: 241 EAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 295
           EAVEYGLIDGVIDKDSIIPL+PVPERVKASLNYEEISKDPRKFLTPDVPDDEIY
Sbjct: 241 EAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 294

[Close]

BLAST of Lcy11g020070 vs. NCBI nr
Match: XP_008448589.1 (PREDICTED: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Cucumis melo])

HSP 1 Score: 531.6 bits (1368), Expect = 4.4e-147
Identity = 278/294 (94.56%), Postives = 288/294 (97.96%), Query Frame = 0


Query: 1   MELLSRCSTLIPHASSLGLPNSHGKPSNFYPKLKSSLSFPSSSSVLKATALKPSRTLAPP 60
           MELLSRCSTLIP ASSLGLPNSHGKPSNF+PKLKS+LSFPS+SSVLK TALKPSRTL PP
Sbjct: 1   MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP 60

Query: 61  FSVLMTSPQTPDAARRGAESDAMGLLLRERIVFLGNSVDDFVADAIISQLLLLDAQDSTK 120
            SV MT+PQTPDA+RRGAE+DAMGLLLRERIVFLGNS+DDFVADAIISQLLLLDAQDSTK
Sbjct: 61  CSV-MTAPQTPDASRRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120

Query: 121 DIRLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180
           DIRLFINS GGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA
Sbjct: 121 DIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180

Query: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI 240
           RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI
Sbjct: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI 240

Query: 241 EAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 295
           EAVEYGLIDGVID+DSIIPLVPVPERVKA+LNYEE+SKDPRKFLTPDVPDDEIY
Sbjct: 241 EAVEYGLIDGVIDRDSIIPLVPVPERVKATLNYEEMSKDPRKFLTPDVPDDEIY 293

[Close]

BLAST of Lcy11g020070 vs. NCBI nr
Match: XP_038876611.1 (ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Benincasa hispida])

HSP 1 Score: 531.2 bits (1367), Expect = 5.8e-147
Identity = 277/294 (94.22%), Postives = 285/294 (96.94%), Query Frame = 0


Query: 1   MELLSRCSTLIPHASSLGLPNSHGKPSNFYPKLKSSLSFPSSSSVLKATALKPSRTLAPP 60
           MELLSRCSTL+PHASS+GLP SHGKPSNF PKLKS+LSFPS+SSVLK TA KPSRT APP
Sbjct: 1   MELLSRCSTLLPHASSIGLPTSHGKPSNFLPKLKSTLSFPSASSVLKTTAPKPSRTPAPP 60

Query: 61  FSVLMTSPQTPDAARRGAESDAMGLLLRERIVFLGNSVDDFVADAIISQLLLLDAQDSTK 120
            SVLMT+PQTPDAARRGAE+DAMGLLLRERIVFLGNS+DDFVADAIISQLLLLDAQDSTK
Sbjct: 61  CSVLMTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120

Query: 121 DIRLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180
           DIRLFINS GGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA
Sbjct: 121 DIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180

Query: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI 240
           RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI
Sbjct: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI 240

Query: 241 EAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 295
           EAVEYGLIDGVIDKDSIIPL+PVPERVKASLNYEEISKDP KFL PDVPDDEIY
Sbjct: 241 EAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPTKFLNPDVPDDEIY 294

[Close]

BLAST of Lcy11g020070 vs. NCBI nr
Match: KAG7015794.1 (ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 530.0 bits (1364), Expect = 1.3e-146
Identity = 278/294 (94.56%), Postives = 285/294 (96.94%), Query Frame = 0


Query: 1   MELLSRCSTLIPHASSLGLPNSHGKPSNFYPKLKSSLSFPSSSSVLKATALKPSRTLAPP 60
           MELLSRCSTLIPHASSLGL NSHGKPSNFYPKLKSSLSFPS+SSVLK TA KPSRTLAP 
Sbjct: 1   MELLSRCSTLIPHASSLGLLNSHGKPSNFYPKLKSSLSFPSASSVLKTTARKPSRTLAPS 60

Query: 61  FSVLMTSPQTPDAARRGAESDAMGLLLRERIVFLGNSVDDFVADAIISQLLLLDAQDSTK 120
            SV MT PQTPDAA+RGAE+DAMGLLLRERIVFLGNS+DDFVADAIISQLLLLDAQDSTK
Sbjct: 61  CSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120

Query: 121 DIRLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180
           DIRLFINS GGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA
Sbjct: 121 DIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180

Query: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI 240
           RIMVHQPLGGASGQAIDVEIQAREIMHNKNN+TRIISEFTGHPFEKVQKDIDRDRYMSPI
Sbjct: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPI 240

Query: 241 EAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 295
           EAVEYGLIDGVIDKDSIIPLVPVPERVKASLNY EISKDP+KFL+PDVPDDEIY
Sbjct: 241 EAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKFLSPDVPDDEIY 294

[Close]

BLAST of Lcy11g020070 vs. NCBI nr
Match: XP_022923515.1 (ATP-dependent Clp protease proteolytic subunit 4, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 526.9 bits (1356), Expect = 1.1e-145
Identity = 277/294 (94.22%), Postives = 284/294 (96.60%), Query Frame = 0


Query: 1   MELLSRCSTLIPHASSLGLPNSHGKPSNFYPKLKSSLSFPSSSSVLKATALKPSRTLAPP 60
           MELLSRCSTLIPHASSLGL NSHGKPSNFYPKLKSSLSFPS+SSVLK TA KPSRTLA  
Sbjct: 48  MELLSRCSTLIPHASSLGLLNSHGKPSNFYPKLKSSLSFPSASSVLKTTARKPSRTLATS 107

Query: 61  FSVLMTSPQTPDAARRGAESDAMGLLLRERIVFLGNSVDDFVADAIISQLLLLDAQDSTK 120
            SV MT PQTPDAA+RGAE+DAMGLLLRERIVFLGNS+DDFVADAIISQLLLLDAQDSTK
Sbjct: 108 CSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 167

Query: 121 DIRLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180
           DIRLFINS GGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA
Sbjct: 168 DIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 227

Query: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI 240
           RIMVHQPLGGASGQAIDVEIQAREIMHNKNN+TRIISEFTGHPFEKVQKDIDRDRYMSPI
Sbjct: 228 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPI 287

Query: 241 EAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 295
           EAVEYGLIDGVIDKDSIIPLVPVPERVKASLNY EISKDP+KFL+PDVPDDEIY
Sbjct: 288 EAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKFLSPDVPDDEIY 341

[Close]

BLAST of Lcy11g020070 vs. TAIR 10
Match: AT5G45390.1 (CLP protease P4 )

HSP 1 Score: 377.5 bits (968), Expect = 9.9e-105
Identity = 209/283 (73.85%), Postives = 230/283 (81.27%), Query Frame = 0


Query: 25  KPSNFYPKLKSSLSFPSSSSVLKAT--ALKPSRTLAPPFSVLMTSP-----------QTP 84
           KPS    +L SS S  SSSS  K     LKP++ ++PP      SP           QT 
Sbjct: 11  KPSLVSSRLNSS-SSASSSSFPKPNNLYLKPTKLISPPLRTTSPSPLRFANASIEMSQTQ 70

Query: 85  DAARRGAESDAMGLLLRERIVFLGNSVDDFVADAIISQLLLLDAQDSTKDIRLFINSPGG 144
           ++A RGAESD MGLLLRERIVFLG+S+DDFVADAI+SQLLLLDA+D  KDI+LFINSPGG
Sbjct: 71  ESAIRGAESDVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFINSPGG 130

Query: 145 SLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGA 204
           SLSATMAIYDVVQLVRADVSTIALGIAASTASIILG GTKGKR AMPN RIM+HQPLGGA
Sbjct: 131 SLSATMAIYDVVQLVRADVSTIALGIAASTASIILGAGTKGKRFAMPNTRIMIHQPLGGA 190

Query: 205 SGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGV 264
           SGQAIDVEIQA+E+MHNKNNVT II+  T   FE+V KDIDRDRYMSPIEAVEYGLIDGV
Sbjct: 191 SGQAIDVEIQAKEVMHNKNNVTSIIAGCTSRSFEQVLKDIDRDRYMSPIEAVEYGLIDGV 250

Query: 265 IDKDSIIPLVPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 295
           ID DSIIPL PVP+RVK  +NYEEISKDP KFLTP++PDDEIY
Sbjct: 251 IDGDSIIPLEPVPDRVKPRVNYEEISKDPMKFLTPEIPDDEIY 292

[Close]

BLAST of Lcy11g020070 vs. TAIR 10
Match: AT1G66670.1 (CLP protease proteolytic subunit 3 )

HSP 1 Score: 201.8 bits (512), Expect = 7.5e-52
Identity = 114/240 (47.50%), Postives = 154/240 (64.17%), Query Frame = 0


Query: 24  GKPSNF------YPKLKSSLSFPSSSSVLKATALKPSRTLAPPFSVLMTS----PQTPDA 83
           GK  NF       PK        SS S+ K     P +TL+  + V   S     Q+P  
Sbjct: 22  GKNLNFPIRNHRIPKTSKPFCVRSSMSLSK----PPRQTLSSNWDVSSFSIDSVAQSPSR 81

Query: 84  ARRGAESDAMGLLLRERIVFLGNSVDDFVADAIISQLLLLDAQDSTKDIRLFINSPGGSL 143
                E D   +LLR+RIVFLG+ VDD  AD +ISQLLLLDA+DS +DI LFINSPGGS+
Sbjct: 82  LPSFEELDTTNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAEDSERDITLFINSPGGSI 141

Query: 144 SATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASG 203
           +A M IYD ++  +ADVST+ LG+AAS  + +L  G+KGKR  MPN+++M+HQPLG A G
Sbjct: 142 TAGMGIYDAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPNSKVMIHQPLGTAGG 201

Query: 204 QAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVID 254
           +A ++ I+ RE+M++K  + +I S  TG P  +++ D DRD +++P EA EYGLID VID
Sbjct: 202 KATEMSIRIREMMYHKIKLNKIFSRITGKPESEIESDTDRDNFLNPWEAKEYGLIDAVID 257

[Close]

BLAST of Lcy11g020070 vs. TAIR 10
Match: AT1G02560.1 (nuclear encoded CLP protease 5 )

HSP 1 Score: 183.3 bits (464), Expect = 2.7e-46
Identity = 89/167 (53.29%), Postives = 125/167 (74.85%), Query Frame = 0


Query: 86  LLRERIVFLGNSVDDFVADAIISQLLLLDAQDSTKDIRLFINSPGGSLSATMAIYDVVQL 145
           L + RI+  G +VDD +A+ I++QLL LDA D TKDI +++NSPGGS++A MAI+D ++ 
Sbjct: 119 LFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAIFDTMRH 178

Query: 146 VRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREI 205
           +R DVST+ +G+AAS  + +L  GTKGKR ++PN+RIM+HQPLGGA G   D++IQA E+
Sbjct: 179 IRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEM 238

Query: 206 MHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVI 253
           +H+K N+   ++  TG   EK+ +D DRD +MS  EA EYGLIDGVI
Sbjct: 239 LHHKANLNGYLAYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVI 285

[Close]

BLAST of Lcy11g020070 vs. TAIR 10
Match: AT1G11750.2 (CLP protease proteolytic subunit 6 )

HSP 1 Score: 162.2 bits (409), Expect = 6.5e-40
Identity = 91/245 (37.14%), Postives = 135/245 (55.10%), Query Frame = 0


Query: 27  SNFYPKLKSSLSFPSSSSVLKATALKPSRTLAPPFSVLMTS----------------PQT 86
           S +   LK+ LS   S S +K     PS    P  ++L +S                P  
Sbjct: 44  SPYGDSLKAGLSSNVSGSPIKIDNKAPSSLPLPILNILKSSTVYFIFGVIEAKKGNPPVM 103

Query: 87  PDAARRGAESDAMGLLLRERIVFLGNSVDDFVADAIISQLLLLDAQDSTKDIRLFINSPG 146
           P     G   D   +L R RI+F+G  ++  VA  +ISQL+ L + D   DI +++N PG
Sbjct: 104 PSVMTPGGPLDLSSVLFRNRIIFIGQPINAQVAQRVISQLVTLASIDDKSDILMYLNCPG 163

Query: 147 GSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGG 206
           GS  + +AIYD +  ++  V T+A G+AAS  +++L GG KG R AMPN R+M+HQP  G
Sbjct: 164 GSTYSVLAIYDCMSWIKPKVGTVAFGVAASQGALLLAGGEKGMRYAMPNTRVMIHQPQTG 223

Query: 207 ASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDG 256
             G   DV  Q  E +  +  + R+ + FTG P EKVQ+  +RDR++S  EA+E+GLIDG
Sbjct: 224 CGGHVEDVRRQVNEAIEARQKIDRMYAAFTGQPLEKVQQYTERDRFLSASEALEFGLIDG 283

[Close]

BLAST of Lcy11g020070 vs. TAIR 10
Match: AT1G11750.1 (CLP protease proteolytic subunit 6 )

HSP 1 Score: 161.4 bits (407), Expect = 1.1e-39
Identity = 90/233 (38.63%), Postives = 132/233 (56.65%), Query Frame = 0


Query: 27  SNFYPKLKSSLSFPSSSSVLKATALKPSRTLAPPFSVLMTS----PQTPDAARRGAESDA 86
           S +   LK+ LS   S S +K          AP F V+       P  P     G   D 
Sbjct: 44  SPYGDSLKAGLSSNVSGSPIKID------NKAPRFGVIEAKKGNPPVMPSVMTPGGPLDL 103

Query: 87  MGLLLRERIVFLGNSVDDFVADAIISQLLLLDAQDSTKDIRLFINSPGGSLSATMAIYDV 146
             +L R RI+F+G  ++  VA  +ISQL+ L + D   DI +++N PGGS  + +AIYD 
Sbjct: 104 SSVLFRNRIIFIGQPINAQVAQRVISQLVTLASIDDKSDILMYLNCPGGSTYSVLAIYDC 163

Query: 147 VQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQA 206
           +  ++  V T+A G+AAS  +++L GG KG R AMPN R+M+HQP  G  G   DV  Q 
Sbjct: 164 MSWIKPKVGTVAFGVAASQGALLLAGGEKGMRYAMPNTRVMIHQPQTGCGGHVEDVRRQV 223

Query: 207 REIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKD 256
            E +  +  + R+ + FTG P EKVQ+  +RDR++S  EA+E+GLIDG+++ +
Sbjct: 224 NEAIEARQKIDRMYAAFTGQPLEKVQQYTERDRFLSASEALEFGLIDGLLETE 270

The following BLAST results are available for this feature:

BLAST of Lcy11g020070 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94B60	1.4e-103	73.85	ATP-dependent Clp protease proteolytic subunit 4, chloroplastic OS=Arabidopsis t...	[more]
Q3ANI8	3.2e-55	55.38	ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain CC...	[more]
Q3B0U1	5.4e-55	54.87	ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain CC...	[more]
Q7V992	4.5e-54	56.15	ATP-dependent Clp protease proteolytic subunit 1 OS=Prochlorococcus marinus (str...	[more]
O34125	7.8e-54	54.97	ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus elongatus (str...	[more]

BLAST of Lcy11g020070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CWB9	1.3e-149	95.58	ATP-dependent Clp protease proteolytic subunit OS=Momordica charantia OX=3673 GN...	[more]
A0A1S3BJF4	2.1e-147	94.56	ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A6J1EC18	5.3e-146	94.22	ATP-dependent Clp protease proteolytic subunit OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1HNH6	5.8e-145	93.20	ATP-dependent Clp protease proteolytic subunit OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1FAG6	2.7e-142	90.82	ATP-dependent Clp protease proteolytic subunit OS=Cucurbita moschata OX=3662 GN=...	[more]

BLAST of Lcy11g020070 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145352.1	2.8e-149	95.58	ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Momordica chara...	[more]
XP_008448589.1	4.4e-147	94.56	PREDICTED: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Cucu...	[more]
XP_038876611.1	5.8e-147	94.22	ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Benincasa hispi...	[more]
KAG7015794.1	1.3e-146	94.56	ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Cucurbita argyr...	[more]
XP_022923515.1	1.1e-145	94.22	ATP-dependent Clp protease proteolytic subunit 4, chloroplastic-like [Cucurbita ...	[more]

BLAST of Lcy11g020070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G45390.1	9.9e-105	73.85	CLP protease P4	[more]
AT1G66670.1	7.5e-52	47.50	CLP protease proteolytic subunit 3	[more]
AT1G02560.1	2.7e-46	53.29	nuclear encoded CLP protease 5	[more]
AT1G11750.2	6.5e-40	37.14	CLP protease proteolytic subunit 6	[more]
AT1G11750.1	1.1e-39	38.63	CLP protease proteolytic subunit 6	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001907	ATP-dependent Clp protease proteolytic subunit	PRINTS	PR00127	CLPPROTEASEP	coord: 152..169 score: 50.56 coord: 173..192 score: 57.75 coord: 121..141 score: 58.93 coord: 81..96 score: 46.88 coord: 230..249 score: 56.38
IPR001907	ATP-dependent Clp protease proteolytic subunit	HAMAP	MF_00444	ClpP	coord: 66..255 score: 37.300987
IPR001907	ATP-dependent Clp protease proteolytic subunit	CDD	cd07017	S14_ClpP_2	coord: 81..251 e-value: 6.12712E-98 score: 283.178
None	No IPR available	GENE3D	3.90.226.10		coord: 62..257 e-value: 5.5E-70 score: 237.1
None	No IPR available	PANTHER	PTHR10381:SF24	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 4, CHLOROPLASTIC	coord: 64..291
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PFAM	PF00574	CLP_protease	coord: 80..254 e-value: 2.4E-72 score: 242.6
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PANTHER	PTHR10381	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT	coord: 64..291
IPR033135	ClpP, histidine active site	PROSITE	PS00382	CLP_PROTEASE_HIS	coord: 174..187
IPR029045	ClpP/crotonase-like domain superfamily	SUPERFAMILY	52096	ClpP/crotonase	coord: 81..257

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g020070.1	Lcy11g020070.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006515	protein quality control for misfolded or incompletely synthesized proteins
biological_process	GO:0006508	proteolysis
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009368	endopeptidase Clp complex
cellular_component	GO:0009526	plastid envelope
molecular_function	GO:0051117	ATPase binding
molecular_function	GO:0004176	ATP-dependent peptidase activity
molecular_function	GO:0004252	serine-type endopeptidase activity