Lcy11g019720 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g019720
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	CS domain-containing protein
Location	Chr11: 47373156 .. 47386096 (+)
RNA-Seq Expression	Lcy11g019720
Synteny	Lcy11g019720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCTTATCCATTTTTACCTCTTTTCTTCGCGCGAAGCTCTAATGGCTTCGACGACCTTTACCAGTGCTCTGTCTCTTTTTTCGCAAAACCCTATCAGAAACCTCGAGTTCTCTTCTCCGATTCTATCCACTATCACCAATGGCGTCGAATTCGCTTCCAATTCCATCGCTCTCACTTCCAGCGCCGGCCTCTCTCCTGCAACTTCTCGTTTCGGTTCCCGTTTCACTCGCAGCTGCTCCTCCAGCACCGCTCCAGTTCGCTCTCTGGATTACGAGGTACTTCTTCTTCTGCGACTGTTTCTGTTTTGTTTGTAGAAAATTTAGGACTGTAAATCGTTGAATTTCCTTGTCGTCTGTTGTCTGTACTAGATACGTTCAGAATTTTTGGAAGTATTTTATCGGATGATGTTTCGCATTGCCTTCCTAAAGCGAGGAGGATTAGATCTGAACCGACTATTGTTAGAATTTATAAATCGAAGAGAAGTTTGCTTCTCTTTTCCAATCGTTCTCTTTATAACCGGCGCTTCGATTGACATACGTTGAGGAACTAGAGGTTAGAGAGCCGAAGTTTTGTACGCAGATGCATCGCTGAGGCTGTAGTGAAAATTTGGGCGTTGTATGATGTGTTGTCTTTATGAGACATGTAAATAGTTTATTGGCAATGAATGATCCACTTGCATCAATTTAATGCATATAATATTTGAAACGAACTGGTTTATTTATCCTCTAATTATAATAATCCCCTAGAATAGCATAAGAAATGGCAGGAATAATTATACTAAATATTATGGTAGCATGTGTTGTGGCCGTTAGATGATGAGTTCTTTCATCATATAAGGATTAGCTCTTTGCATTTCATTCTTTAACCCAATAGGGATGATTCTCTTATTCACCGTGTATTTGAGTTGCCTTTTTATTTGTTCACCAGTCTTTAACCCCAATACTAGATGAAATTTCATGCAGTTCACCGATGGTTCTTCTGAAGTGGAACTGAGGTTACAACTTGGGACTCAAGAAATTCGTAGTTCAAAAGATGTTTTTGTGGATGCAAATGAAACCTCTTTAACAATTAAAGTACAATGCTCGGGATCTACCATCACTCTTCTGGAAACAAAGCAACTATTTGAGAAAATAAAACCTGCAGAAACAATATGGTTTGTCATTGTCACGGTAGATAGCCTCCTACACTCAGTATGAATTGTCTAAATATGAGATTTCTTATGTTGAACAGGTATATTGATGAAGATCAACTAGTTATAAGTTTAAAGAAGCATGATCCAGACTTGAAATGGCCTGACATTGTGGAGTCTTGGGAATCCCTAACAGCAGGATCTACACAGCTTCTAAAAGGAACATCAATATATTTGATAGGGGATTCGACAGATATTAACCAAAGAGTTGCTCATGAACTAGCAGTTGGACTTGGGTATAGTTCTTTTTCTGTCTTGGGTCATTTTCATTTTCCAATGTTCAAAGTTGATAATGGTGATCACGCCTATTGCTGGTTTATTTGAAATAACTGATTATATGCTTTCCAGGTAGTGTATATCAACTGAATTGTGACCTTGTAATGTATATAGCTTACAGCTTAAAGAGGCAAATATTTTATCGCAAGATAGGACCTACTTCATCAGTTATCTTAAGCAAGACAAACATTAACTTCCTTTATTCAATTATTACCATCTAAAACTCAGAAATTTATGCCCTTTCTAGTATTGTTCCTAGAACTTCCATCTGATAAATTTTTACTCGAATGATCTCAGGTATACTCCACTGAGTACAAAAGAACTGCTGGAAACATTTTCCAAGCAGACCATTGATTCATGTAAGTACTTTTGACCCTGAACATGCTTTAATGTCACTAATCACTGTCAGGATCCGCTAACTTTTTATTTCCCATTACACAATAATCACCTTCGCATTAATTTGGTCTATATTGATTCTGAGGTCAGAAGTGTTATGTACCAGTTGCTTTGTTTCTTTTTTCTTTTTTCTTTTTTATTTTTAAAATGTCGAATGGAAGGTCCTCACAAGAAAAGAGGTACCGAGCCAAAAGGGAACTGCAGAAGCTTACACAAAAGATCCCCAACTTTTGGTAACAAGAAATAAAGTGTAATCACAAAATAAATATGAATTAAGTGTCCAAAAGAAGAGAGGACTCAAAATCTGAATTGTGCCACTCCTCATTCAACTTCTTCCTTTTCTCCTTCATGAAGTGAGGACTCGAAACTTCTTCCTGCATCATCTCCGTTGAACAAACCAAAACTTACCAAGCAATCCCACTTTATGGACGTGGAAGGACCCATGAACTATGATTCAAATCCTCTGCCATTCTCCTAAACTAAGAACCAACGACAATAGAGGAGCTATGGTATTGATTCTTAGGTCTAAGAGCCCAGCAAAGAGGTGCATACTCTTTTGAATTTTCAATTTCCACAAAGTAAAGAAGAATTGCATGTTTGAAGAAGTCAGGAAAAACACCAACCGACTGGTTAAGAGGTAAAAAGGGAGGCTAGCTCCTCGATCTCACACCTTTTCAATTATGTTGATTTATAAAATTCAATTAATAGTTGCTTTTCAAATTAGCTTTTCTAAAAATCTGGTGGATTTGCTAGCTAACTATTTATCCTCCCATACCTCTACATTGTTGAGACGTAATTCACTTAGTTTATATTTAAAATTTAATTTGTAGCTTCTATTATCTTACTTTAATTCAATTGAATATATTTTTCTTACTTTTTTTTTTATTATTTAAATTGAAATAACATCTTTTTCATTTTTTTAATCTATTTTTTCTCATCAAAATATAAAAATTTATGGACTAAACACAATATTGTGATTTAACTCATATATATTTGAAATTAATTATCTTATAAAAACCTTGGAATTAAATATCAACATACCAATATGCATTATTGAAATATTAGGCCCATTTTGGTAATTATATTTAAGCTTCAATAATTTAATATTAGTTTACCAAACGTTTTAACCTACTTTTTCATGTTTAAAGCCGAAACTTTTCAAACACTAATTTACTACCCAAGCTAGCTCGGGTACTCACATATTTAAAAAAAATCTACTAGTATGGATCCAATAAAACTCTACGACCAGTCCCTATTTAGGAAGGTAATGAAAGCAAGGAAAATCTACTTGTCAGTTGTTGCGATGTGACTCATACTTGCTCATAATTGCCTAATTCATCGAAGTCTGAGGTTCTAAAGGGAACCTGACAACCATTTTAGAGAAGGGCTATATTCTTGGTGCTTATATTTCCTATTCCAAGCCCCATTCTCACTAGTTTCCGATTCATCATTCTAATTATTTTTAAGTGTGACCCACCCTCTTCTTCTAGTTTTCTTGAATAAACTTTTTTTGGTAAGAAACCGATGTTTCATTGGGAAAATGAAAGAATTTACTAGGACATATAAAAACAAGCTTGCAAAAGGAGTCCTTAACTAGCTACAAGAACATACTCCAATCCAAAAGAATTACACAAAGCTGGTAACTACAAAAAGTTCAATTAACGTACGCCCATAATGACTCATTAAACCTCACAACCTCCCACACCTCCTCCAAAGATTTCTCCATCCCTCCTAAAAATTCTACTATTCCTCTCGAGCCATACTCCCCACAAAACAGTAGTCTGCCACAAGACCCTTCCTTTATCTCGAAAGGGATAATTTATTAGGATCCCCTCCGTCATAGAGCAACAGTCCCTATTACACACCACAACAACACTTCACACTCTAAAAAACCGATTCTAAAGGGAATAAGCAAATTGGAATCCCCACTAAAAATGATCAAGATCTTTCTCCTACTGGCGACAAAGGACACACCACTGCGGATGTAGAACCAAGGAAGAATGTTGTTAGATATGATCCTGGATGTTCACTCTACCATGTGAAAATTTTCAAGCAAAGAACTTCACTTTCTTACTGACTTTCACCTTCCCAAGAGAGGAAAAAACTGAGGCTCATTGAGTGGGAGAAGGGGAACTAAGAATGAGGAAGAAAGAGTGACACGAGAATTCTTCAAACAGCTTAGGAGCCCATACTTGTACATCACTTTTCCCCAAAGAAACTCTCAAATCGAAGATGGTGGGAAAAAAAAAAGCAAACTACCTCCAAAGATTCATGATCAATGAGAGGACTACAAAAACTCAAAGAAAGTGAAGGGGACAACTCAAAGGAAGACAAGACAGAGGCACCAAATGTAACGTCTTATCAGACAAATGATAAAGGTGGGGGAATAAATCACAAAGGGGCTTAACACCCACCCAACAACCCTCCTAGAAATAAGTATTAGACCTATCTTCGACTGATCATTTAATGAACTGGGAAAACAAAGGAAAACTCACTCAACAGAATGCAAACCATACTTACTCACAATGACCCTATACCACAAAGCATGTGGTTTTTTTGGAGAATCACCCTAACCATTTTGCCAGCAAAGCCTCCTTAAGTATTCTCAGGTTACCAATTGCCTAAACCTTCAACCTCTACTCTCCTTGAGACAACCTCCCAATGCTCCCAAGTCCCACCTTATCAAATGACAACCACCACCCTCCTCAGTTTCCCATGAGAAATTCCCCATAAACGTTTTAGTACTCTTACTCACCGAGATTGGAATTCTAAATAGATAATGGTAATAGATAGGGATCTCATAAAATTTTTCCTGTTTCACAATAAGCACCTTTTTTTTAAAATGACATGGAGAAGCCCTCACAAAAAAAGAGGGCCACCAAGCCAAATGGGAATTACAGAAGCTTACACAAAAGATTCCCAACTTTTGGTAATAAAAAAACAAAAAGAGTTTAATCACAAAATAAAGTTGAATTAAGAGTCCAAAAGAAAGTATTAAAATGTGCCACTCGTCAAGCAACTTTTTCTTTTTCTTCTTGAGGACTCAAAACTACTTCCTGCATCATTTCCGTTTAACAAGAGATTAACCAAAACTCTACCCCAAGAAATTCTACTTTGTGGATGTGAAAGGGCCCACGAACTACATTCAAATCCTCTACCATGCTCTTACACACAGTTAGGACCAAAGACAAAAGAGGAGCTGTGGTATTGGTTCTTCTCTCTTGGCCAAATGGATTTGGAGATTTTACCAAGAACCGGAGGCTTTATGGAGGAAAATCATCGCTACAAAATATGGGGTGGCTCGAAATCCCCTAAAATTGGGTAACCACTCCATTAGCTCCTCCAAAGGACCATGGAAAGCTATCCACAGCTTGCAACATTTTATCTATGATAACATTGATTCCAGAGTTGGGAAGGGTAATAAAACTCTTTTTTGGGAGGATATTTGGCTTGGCTCATCATCTCTTATGACTAAATACCCATCTCTGTATAACTTATCTCTAAAAAAAGAAGCATTCATTGCTGATCTATGGAATCCTAGTAATGGGTCTTGGAACCTTCATTTGAGGCGAAATCTCAATGAGAATGAAATCCTAGAATGGGCTATTTTATCTCATCATCTTACCAACTTCTCCATCAAAGACGAGGAAGACTCATGGAGGTGGCAGCTCGGAAACATTGACAGCTTCACCACGGGATCTCTCACGAAAAAATTGGCTTCCTCTTCTCCCACAACCGGAACAACATTATATAGTAGACTGTGGAAAGGTCCTATGCCGAAAAAGGTTAAATTCTTCATATGGGAACTCAATCATGCTAGCATCAACACCGCAGACGTCATTCAGAAAAGATATCCTGGAAATAGTCTTTCTCCTAGCTGCTGTGTCATGTGTCACAAAGCTAGCGAGACCCAAGCTCATCTATTCAGTAGCTGCGATTTTGCATCAGAATTTTGGTCTCATCTCCAGCATGCTTTTGGGTGGCTTTTTGCTCGTCCGGGTGACATCTACACCCTTCTCTCTTTATCTGTTTGTGGATCTCCATTTACAAAAGATAAAAAGCTGATATGGCAGATTTTTTTGTATGCTTTCCTATGGAATCTTTGGCTGGAAAGAATCGCTAGAGTCTTTACTGATAGGCATCAAAGCATCAGTTCTTTTATAGAATCCACTACTTATTTGGCCTTATATTGGAGTAGACACACCCCCTATTCTGTAATTACTCCCTATCTTCCCTATTGACCCAGCGGCGGAGCTACAGTAGGCCCAGGGGGGGCTCGAGCCCCTCCTGAACTTTACTGTTTATTAGATTTATATTAAAAAGTTCACATAGATTACAAAATTTCTAATTGCCTCGTTGGCATTATCACCTCAAGCCCCCCCTAGCGCGCGCCTAGTGGCTGAGTTCGAGTCCCCTGAAGCGTGTTTTTTTTCGCTTTTAAGTCCATTTTTTTTTGCGCCAGTGACTGAGTTCGAATCCCATGAAACGTGCTTTTAAGTCTATTTTTTTTGCGCCCAGTGACTGAGTTCGAGGCCTCTGGAATGTATTTTTTGCTTTTTTCGCTTTAAGTTCGTTTTTTTATTAAAAATATATTTTAAAAAATGTTTTCTTTTTTCTTTTTTAATAACTTTTTGTTTTTGTTTTTTTATAAAACTTTTTATGAGTATATATGATCAAAAAAAGTTACTACTCTTTAAATCAATACTAAAACTATACTTTTCAAGGAAATAATATTAGACCTATAATATTTTTAAATGCTAATATTGTTTTTTAATAATTAATTCTATTTGAAAAACTATAATTATTGTGATTTTCATTTTTATATATATATATTTTTTTCTCCAACCCTCTTTGTATAAATTTTGGAAACATATGGACATTGTGTCTTTGTCTTTTCTTAAATGAAAATTATTATCATTATGAAATTTAATACAAATTTACTTCAAACTACCAAAATAAGTACTAATTTTAAGATTTATTGAAAGTATGTGGACTAAATTTGGACATTTAAAAGTATACGGACTAAAATGAAATGAGACCTAGAGTACATTGACCAAAATGGTATTTTAACCTAAAAAATGTAAATAATATTTTTTATTGAACAAACTAATATCAAAATATATCAAGCCCCCCCTAAGATAAAGTTCTGGATCCGCCACTGTATTGACCCATTGGAGATGTCTTTTGTAATCCCTTTGATAGGTCTTTCTTTTGTAACGATTTCATTCATCAATGAAATGGTTTATGTTTCCTATCAAAAAAAAAAAAAGTATTGGTTCTTCTTAGGTCTGAGAGCCCAGTAAAGAGTTGCATATTCTTTTAAATCTTCAACTTCCAGAGAGTAGAGAAGAAAGAGCAAGTGGGAGAAGTTGGGAAAAACACCAACTGGGTAAGAGGTAAAGGGAAGGCCAACTCGATCACACAATTGCTAAGTGCCCAAAAGGGAGTTCGCAATTGGAAGGAACTAGTATGGATCCAATAACCCTCCGAAAATTGAGCTCCACTACCAACCCCCATAAACAAAGGTAATGAAAAGGAGAAAACTTGGGAGACCGGGGGAAATTAATTACCAAGGACTTCAGGAAGTGGCCTTAGAAACAACCTGCATTTCATCTGTTGGGGTGAAACTCATAATTGCTCATAATTGTCTAATGCAACAAAGCCTGAGGTTCTAAAGGGAACCTCACAATCATTTTAGAGAGAAGGGCTATATTCTTGGTGCTTAAATTTCCTATTCCAAACCCCATTCTCTGGATTTTGAAGAGAAGTGAAATACAATAGGATACTGCTAAACACACTAAATTGAGGTTAGTGTTCCCTCCTTTGATAGAGAAAAAAAACATTCCTTCTAGACTAAAGTTTCTTTTGACACTTCTCCACCATTCGGTCTAAAAGAGAGTTGACTTGAGGATAATGGGAAGAGAAAGCCTAAATAACACAAGGGAAGAAAAACAAACAACCTTGCACCCAAAAGGACTAGTTCACCGTCTTAGTTTGCCTACGTCATATCGTCACAAATGATCTTGGATAAATAACACTTATCACTTTTAATTGGATGCCCAACATTAAGTCAAAAACTTGCTAGATGTTAATCAGATATCAGAAAGGCTCTTCATTTCCCGCACAAAAAACGATAGTGTAATTAGCTAATTGTAACCACCCTACACATTGAGAACATCTACTGCAATTATGAATAAAAAGAAATTCTCCTTGGTTTGTCGTTTGGTTAATTGTAAGTAATTGCCAACCTACATTCTCCATTTGAAACCACCAACCTTTTTTCCCACAAAATATTGTCCAAAATTCCTAACTCACGTGGTCACAAGCCTTTTCAAATTCTATGTTTAAACTTATACCTTCGTTCTTTAGCTATTACAACGTAATCTAGAATTTGCCTTCTCTTGACAAAGTCTCCTAATTTCGGGGATATGGTGCTAGGGAGCACTTGTTTTATTCCTTTTGCCGAAGTCTTGGGGATGATTTTAGCAAAGCTATTGGCAAGTGCAAGACTAATTGACATGAATAACTTAATTCTACGTGCTCCAGTCTTTTTTAGGAGGCAAATGAAAGTTTTATTCGTTGTTTTGTCCACCATACCTTTGTCAAAGAATTTATTGAACACCCAAATCATATCCCTAATAAAGATATTATGGCTTGGAGCCTTGCCTCTCATGCAATTAAACAATACGCCTTTTATTTCTTTAAGAGTATAGGGTTATTCAAAAGACTCCAGTTGTTCCTTACTAATAGCATGCTAGTCCAAGCCTTCCTCAAACAACGTAGGAGTTGTTATTTGGGGCAACTGAGGCTGTGAAGAAGGCCAAGTTCTTTCTGCAACCACTCTATCTTTTGAAGTTAGGCTTCCATCCTCTAATTCTATGGACAAGATACAATCTTTGAGTTTCATGATATTAAATATTTCGTGGAAGTAGGAAGTATTGCAATCACCTTGTTTGAACCAATTTGCCTTAGCTTAAGACTCTGGCCATCATGATTGGTTCAAAGACCAAGGCACTACAAGAATCAAACAACACTTCCTCAACATCATAAGGTTCCATTGGCTTAGATCAAGTGACCGAAGCACAGGAAAGACCAAGAGAAGAAGCAAATATCATAATATAAAAATGAAAATAAGAGTTATTTGAAAGCCTGAACGTATCAACTTCAGTTGAGCAAGATCCTGCTTTTTTTTTTTTTATAGGAAACTATAAGAGATATGTATTAATAACTCACAAAAGAAGAAGACAACCTAGGGGTCGAGGGAGGAGATCGCCCTCGCCCAAGAACTAATACAAAAGAGCTTGCCAATCTTTAATAATCGATAGCAAACTATAATTACAAAAAGAATGTTTGTGTAGAGAAATCCACCACGAGGCTGTATTTTGAACATTGTCACAAAAGAAGTCTAGGCTAGCCGACTTGTCTTCAAAAGTTCTAGAGTTCCTTTCCTTCCACAAAAGCCATAAAGTAGCCCTGAAAACACAACCCGCCATGATCTTAGCTTTTTTCTTTAGGTTCCAAGCCGCTAGCCCTTCATAGAACCAATCATCTATCTTGTTGGGAAGGCAGAAAGATATACCCAGGAGATTAGCCACAAAAAACCACACCTTCTTGGCAAAACCACAATGGAGCTCTAGCAAGATCCTGCTTTTAAGCTCAACTTTTGAAGAAAGGTCCTCTTATACTAAACCTGATCTTGTGAGGAACTGTTACCTCTTTCAACTGTCGGAACCTCTAGCAAAGAGAATTCGTTGTTGCTCGAACCAACCATTAATATTGTAGTATTTTATTTTAGACCTTTTTCACCGTCTTTGTCATCTTGATATCATCTCTGTTTTCACCTTTCAACTTTGAGCTTTCTTTATCATAATGTAAAAATGAAAAGAGAGGTTATTTCGAAATTTCTTATGGAGAGGCAATAATGTAAAGGGAGGCACTCATAACCTTAAATGGAAGAAAGTTAAACTCCTAATTGAGGAAGGGGGTTTGGGGATTATGGACCTAATTCAGAAAAACATTGCATTGCTATCTAAATGGATTTGGAGATTTCATATTGAAAAATTTGCTCTTTGGAGGAAAGTCATGGCTTAAAAATTTGGCTCCCAACGTTTTGATCTCAAGCCAGGAACCTTTTCCCTTAGCACATCTAGGGGACCTTGGAAAGATATTCAGAAGCTGAAAGACCGTGTATATTCTCATATACCCTGCAAAATTGGTAGGGGTGATGGCACAAATTTTTGGTTCGATATTTGGTTGGGAAATGTGGCTCTAAAAGAAAATTTTCCCTCATTATTTGCTATATCTCAAAAGAAAGAAGCTTTGGTGTCCGATATGTGGAATCCCATCGCAGCTTGCTGGAATTTTCTCCCTAGAAGGCACATGATAGACAGAACAATTATGGAATGGGCTAATCTTTTAAATTCTCTCGATTTGAGCTCTCTTAATGAATCTCCTGATTTTTGTTGCTGAAATTTGGAGCCCGATGGTACTTTGTCTTCAAAGTCACTTTCCAGATATCTATCTTCAACAGGCCTATTTGGATGCAAAGACTTTTACAAATCCATTTGGAAAGGCTTTTATCCAAAGAAGGTCAAAATTTTCATTTGGGAATTAAGCCATTATTGTCTGAATACGTATGATAAGCTTTAAAGACGATTGCCCTGAATAGCCATATCCCCCAGCTGTTGTATTCTTTGCAAAAGCAGTGGTGAATCACAAAGCCACCTTTTTATTTTGTGCAAACAGGCCAGAGTTTTTTGGGATTTTCTCCTTCAGGCTTTCGGGTGGTAGGTTGCTTTTCCTCAAGACATCAAGGATCTCCTTCTTTTGTTACTCACCGGTCAATCCTTTTAAGAAGGAAAAAAAGGTCCTTTGGTTGAAATATATCATAGCCTTCCTATGGGTTTTTTGGCTGGAGCGAAATGCACGCATCTTCAAGGACTCTTTACTTCTATCATCTTTTTATCTCTAAATTGGTTTAAATTGGTATCCCCTTAAGAAGCATCGATACAGACACAAGACATAGATATGACACGACATGGACACAGTGACACGTCATTTTTTAAAAATCCAGGACATGGACAGGTTTAGTAAAATATACATTTTTAAAAGTATATATCATTTTTATATAGGAAGAAAATTCAAAATGAATAAGATTATGCATTTATATGCTTAAAAAATGAGTTTAATGTATTTCACTCTTAAAATTTATTATTTTTGTTATTTAGTATACTTAACAAGTGTTCGATATGGATCTAAATTGACTTTGTACAACTAGTGTTTGCACATGTCATTTGTGCTAACAAGTGTCTGATACGTGCCAAACAAGTGTCGGAGTGTCCAACTGTTCGACGTGCGTTAGACACGGACACACTAGCCAAACTAAAGTGTCCGTGCTTCTTAGGTGTCCCCCTTTTGTAATTTAGCTTCACTAATTTGTTGTCCAGTTGGAAGAGTTTTTTGTAATCCACATGGATAGGATCTCTTTTTTGTAATCCACATGGATAGGATCCCCCTTTTGTAATTTCATTTTATCAATGAAATAGCTCTTTGTTTCCATTATATATATATATATATATATATTAAAAAAAAAAAAAAAACTTTGAGCTTTCTATATCTGTCCCCACAAAGAATTGTTGCAAATCCAGTGTTATATCCTCTTATTATCAGGGATGAGGGATAAGTTTCTCCATCCAAAAGAGTCTCATCCAGGCCTCACATAGTTCCCCTTGACCGTAAACCATGAACCACAAGGATCAACATCGAAGATGAAGCCCCTTTCTTTGATGCTGCCGATTTTAGAGAAACTGCTGCTCGTCATGTTATATACTCATAAATTCTAACAAGTCTCTGGAATCTTTTCCTCCGAACATGCTCAAAATCAACTGCTTGGACTTCAGAGAGTAGGTTCGGTTCCATCAGTTATTAATTATAATTACTTCAGTATTAAAACTGAATCGAGCATTTCCCGAGTGCTCACACCCAAGTTCCTATGATTTACCACTTACCCAAACATTTGATAATGCTAAACTCAGACTTGAGAAGCAACACTACGTTACATGCTTGAAATGACTTTTATCCCCGATTTTGCAGTGTGTTAATGACTGTAATCAATTCCAGGGATGCTTGCTGAAGGTTCTGATTCTGTAGCACAAGCAGAAAACGCTGTATTAGAAAGTTTAAGTAGGTATGCCCAATACTCGCCTTGATCTATTGGCATTTGGTTGATTAACAAAATTGGAGAATGCATATTCTTCTTTCCTGTTGATTACACAGCCATGTCCGTGCTGTTGTTGCGACACTAGGAGGTCAGCCGGGAGCTGCAGGAAGAACTGATACTTGGAGACATCTTTACGCTGGATTCACTGTCTGGCTTTCTCAAACTGAGGCTACGGGTAACATATAACTCTATACATTGTTGTCGTTTCATTTGGTTCTAAACTTTTCATGCATTTTGATTTTAGCATTTCTTTTCCATAAGTTGATGAAAACCCCATTTGAAAGTTTAAGATGCCAATTTCAATGTACGTTTACGTGGAACTTTCCTTGTTGGTGTTTTAAAAGCAGATGAAAGTGCAGCTAAGGAAGAAGCTAGGAGACATATGCAAGACAGTAGACTAGCCTACTCAAATGCAGAAGTTGTAGTAAAGCTTCAGGGTTGGGATAATGCTCATTCCAAGGCGGTGGCTCAGGCAGCATTGAGTGCCCTTAAACAACTTATTCTGTCAGACAAAAACCTTCCAGGTATTCTTTGTGACATAGCAATTTCGAACTCAATTCTTATAGCAAAATTTTTGTTTTTCTGCATGTTATATAAAATGAGGTTTACCTACTATTTTGGTATATGTATTTTCAAAACGTTCATTTTAGACCCTATACTTTCAGTTTTTGTCTATTTTAGTACTTGCATTTTTTAAACGTCTATTTTGGTCGTTGACTGAGGCCTAGATTATTACCTAGGTTTTGAGATGGGTTTGACAGAATATAAAACCTAAATAATTATTATTCATGATAAAAATATCTTATGAACTATGAGATTTTATATTGGACATAGGAATTTTTTTTTTCAATTAGTGGTGA

mRNA sequence

CTCCTTATCCATTTTTACCTCTTTTCTTCGCGCGAAGCTCTAATGGCTTCGACGACCTTTACCAGTGCTCTGTCTCTTTTTTCGCAAAACCCTATCAGAAACCTCGAGTTCTCTTCTCCGATTCTATCCACTATCACCAATGGCGTCGAATTCGCTTCCAATTCCATCGCTCTCACTTCCAGCGCCGGCCTCTCTCCTGCAACTTCTCGTTTCGGTTCCCGTTTCACTCGCAGCTGCTCCTCCAGCACCGCTCCAGTTCGCTCTCTGGATTACGAGTTCACCGATGGTTCTTCTGAAGTGGAACTGAGGTTACAACTTGGGACTCAAGAAATTCGTAGTTCAAAAGATGTTTTTGTGGATGCAAATGAAACCTCTTTAACAATTAAAGTACAATGCTCGGGATCTACCATCACTCTTCTGGAAACAAAGCAACTATTTGAGAAAATAAAACCTGCAGAAACAATATGGTATATTGATGAAGATCAACTAGTTATAAGTTTAAAGAAGCATGATCCAGACTTGAAATGGCCTGACATTGTGGAGTCTTGGGAATCCCTAACAGCAGGATCTACACAGCTTCTAAAAGGAACATCAATATATTTGATAGGGGATTCGACAGATATTAACCAAAGAGTTGCTCATGAACTAGCAGTTGGACTTGGGTATACTCCACTGAGTACAAAAGAACTGCTGGAAACATTTTCCAAGCAGACCATTGATTCATGGATGCTTGCTGAAGGTTCTGATTCTGTAGCACAAGCAGAAAACGCTGTATTAGAAAGTTTAAGTAGCCATGTCCGTGCTGTTGTTGCGACACTAGGAGGTCAGCCGGGAGCTGCAGGAAGAACTGATACTTGGAGACATCTTTACGCTGGATTCACTGTCTGGCTTTCTCAAACTGAGGCTACGGATGAAAGTGCAGCTAAGGAAGAAGCTAGGAGACATATGCAAGACAGTAGACTAGCCTACTCAAATGCAGAAGTTGTAGTAAAGCTTCAGGGTTGGGATAATGCTCATTCCAAGGCGGTGGCTCAGGCAGCATTGAGTGCCCTTAAACAACTTATTCTGTCAGACAAAAACCTTCCAGGTATTCTTTGTGACATAGCAATTTCGAACTCAATTCTTATAGCAAAATTTTTGTTTTTCTGCATGTTATATAAAATGAGGTTTACCTACTATTTTGGTATATGTATTTTCAAAACGTTCATTTTAGACCCTATACTTTCAGTTTTTGTCTATTTTAGTACTTGCATTTTTTAAACGTCTATTTTGGTCGTTGACTGAGGCCTAGATTATTACCTAGGTTTTGAGATGGGTTTGACAGAATATAAAACCTAAATAATTATTATTCATGATAAAAATATCTTATGAACTATGAGATTTTATATTGGACATAGGAATTTTTTTTTTCAATTAGTGGTGA

Coding sequence (CDS)

ATGGCTTCGACGACCTTTACCAGTGCTCTGTCTCTTTTTTCGCAAAACCCTATCAGAAACCTCGAGTTCTCTTCTCCGATTCTATCCACTATCACCAATGGCGTCGAATTCGCTTCCAATTCCATCGCTCTCACTTCCAGCGCCGGCCTCTCTCCTGCAACTTCTCGTTTCGGTTCCCGTTTCACTCGCAGCTGCTCCTCCAGCACCGCTCCAGTTCGCTCTCTGGATTACGAGTTCACCGATGGTTCTTCTGAAGTGGAACTGAGGTTACAACTTGGGACTCAAGAAATTCGTAGTTCAAAAGATGTTTTTGTGGATGCAAATGAAACCTCTTTAACAATTAAAGTACAATGCTCGGGATCTACCATCACTCTTCTGGAAACAAAGCAACTATTTGAGAAAATAAAACCTGCAGAAACAATATGGTATATTGATGAAGATCAACTAGTTATAAGTTTAAAGAAGCATGATCCAGACTTGAAATGGCCTGACATTGTGGAGTCTTGGGAATCCCTAACAGCAGGATCTACACAGCTTCTAAAAGGAACATCAATATATTTGATAGGGGATTCGACAGATATTAACCAAAGAGTTGCTCATGAACTAGCAGTTGGACTTGGGTATACTCCACTGAGTACAAAAGAACTGCTGGAAACATTTTCCAAGCAGACCATTGATTCATGGATGCTTGCTGAAGGTTCTGATTCTGTAGCACAAGCAGAAAACGCTGTATTAGAAAGTTTAAGTAGCCATGTCCGTGCTGTTGTTGCGACACTAGGAGGTCAGCCGGGAGCTGCAGGAAGAACTGATACTTGGAGACATCTTTACGCTGGATTCACTGTCTGGCTTTCTCAAACTGAGGCTACGGATGAAAGTGCAGCTAAGGAAGAAGCTAGGAGACATATGCAAGACAGTAGACTAGCCTACTCAAATGCAGAAGTTGTAGTAAAGCTTCAGGGTTGGGATAATGCTCATTCCAAGGCGGTGGCTCAGGCAGCATTGAGTGCCCTTAAACAACTTATTCTGTCAGACAAAAACCTTCCAGGTATTCTTTGTGACATAGCAATTTCGAACTCAATTCTTATAGCAAAATTTTTGTTTTTCTGCATGTTATATAAAATGAGGTTTACCTACTATTTTGGTATATGTATTTTCAAAACGTTCATTTTAGACCCTATACTTTCAGTTTTTGTCTATTTTAGTACTTGCATTTTTTAA

Protein sequence

MASTTFTSALSLFSQNPIRNLEFSSPILSTITNGVEFASNSIALTSSAGLSPATSRFGSRFTRSCSSSTAPVRSLDYEFTDGSSEVELRLQLGTQEIRSSKDVFVDANETSLTIKVQCSGSTITLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGSTQLLKGTSIYLIGDSTDINQRVAHELAVGLGYTPLSTKELLETFSKQTIDSWMLAEGSDSVAQAENAVLESLSSHVRAVVATLGGQPGAAGRTDTWRHLYAGFTVWLSQTEATDESAAKEEARRHMQDSRLAYSNAEVVVKLQGWDNAHSKAVAQAALSALKQLILSDKNLPGILCDIAISNSILIAKFLFFCMLYKMRFTYYFGICIFKTFILDPILSVFVYFSTCIF

Homology

[Close]

BLAST of Lcy11g019720 vs. ExPASy Swiss-Prot
Match: O82290 (Probable inactive shikimate kinase like 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SKL2 PE=2 SV=2)

HSP 1 Score: 404.8 bits (1039), Expect = 1.1e-111
Identity = 217/341 (63.64%), Postives = 264/341 (77.42%), Query Frame = 0


Query: 23  FSSPILSTITNGVEFASNSIALTSS---AGLSPATSRFGSRFTR----------SCSS-S 82
           F+SP L+ +T    F S++   +S    +G      R   RF++          SC+  S
Sbjct: 12  FNSPSLNPVTTQATFLSSNRIRSSPRVFSGFHSLRRRGFRRFSQNVIPDRFNSFSCNCLS 71

Query: 83  TAPVRSLDYEFTDGSSEVELRLQLGTQEIRSSKDVFVDANETSLTIKVQCSGSTITLLET 142
                ++DYEFTDG  EVELRL+L T EI S KD+ VDA+ TSL +K + +G  ITLLET
Sbjct: 72  AVSTSTIDYEFTDGGKEVELRLRLKTGEILSPKDISVDADGTSLAVKEKRNGLLITLLET 131

Query: 143 KQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGSTQLLKGTSIYLI 202
             LFEKI P+ETIWYIDEDQLV+++KK D +LKWPDIVESWESLTAG  QLLKG SIY++
Sbjct: 132 NHLFEKIMPSETIWYIDEDQLVVNMKKVDGELKWPDIVESWESLTAGMMQLLKGASIYIV 191

Query: 203 GDSTDINQRVAHELAVGLGYTPLSTKELLETFSKQTIDSWMLAEGSDSVAQAENAVLESL 262
           GDST+INQ+V+ ELAVGLGY+PL +KELLE+FSKQTIDSW+LAEG DSVA+AE++VLESL
Sbjct: 192 GDSTEINQKVSRELAVGLGYSPLDSKELLESFSKQTIDSWILAEGPDSVAEAESSVLESL 251

Query: 263 SSHVRAVVATLGGQPGAAGRTDTWRHLYAGFTVWLSQTEATDESAAKEEARRHMQDSRLA 322
           SSHVR VV+TLGG+ GAAGR D WRHLY+GFTVW+SQTEATDE +AKEEARR  Q+  + 
Sbjct: 252 SSHVRTVVSTLGGKHGAAGRADQWRHLYSGFTVWVSQTEATDEESAKEEARRSKQEREIG 311

Query: 323 YSNAEVVVKLQGWDNAHSKAVAQAALSALKQLILSDKNLPG 350
           YSNA+VVVKLQGWD  H+K+VAQA+LSALKQLI+SDK LPG
Sbjct: 312 YSNADVVVKLQGWDPTHAKSVAQASLSALKQLIISDKGLPG 352

[Close]

BLAST of Lcy11g019720 vs. ExPASy Swiss-Prot
Match: Q31PU5 (Shikimate kinase OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=aroK PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 5.7e-07
Identity = 34/104 (32.69%), Postives = 51/104 (49.04%), Query Frame = 0


Query: 180 LKGTSIYLIGDSTDINQRVAHELAVGLGYTPLSTKELLETFSKQTIDSWMLAEGSDSVAQ 239
           L G  ++L+G        +   LA  LGYT + T  L+E  + ++I     ++G     Q
Sbjct: 7   LNGLDLFLVGLMGSGKTTIGKLLAESLGYTYVDTDSLIENVTGRSIPEIFASDGEAGFRQ 66

Query: 240 AENAVLESLSSHVRAVVATLGGQPGAAGRTDTWRHLYAGFTVWL 284
            E  VLE ++S+ R VVAT G   G   R + W +L  G  +WL
Sbjct: 67  IETQVLEEVASYRRLVVATGG---GIVIRPENWSYLQQGLVIWL 107

[Close]

BLAST of Lcy11g019720 vs. ExPASy Swiss-Prot
Match: Q5N4D3 (Shikimate kinase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=aroK PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 5.7e-07
Identity = 34/104 (32.69%), Postives = 51/104 (49.04%), Query Frame = 0


Query: 180 LKGTSIYLIGDSTDINQRVAHELAVGLGYTPLSTKELLETFSKQTIDSWMLAEGSDSVAQ 239
           L G  ++L+G        +   LA  LGYT + T  L+E  + ++I     ++G     Q
Sbjct: 7   LNGLDLFLVGLMGSGKTTIGKLLAESLGYTYVDTDSLIENVTGRSIPEIFASDGEAGFRQ 66

Query: 240 AENAVLESLSSHVRAVVATLGGQPGAAGRTDTWRHLYAGFTVWL 284
            E  VLE ++S+ R VVAT G   G   R + W +L  G  +WL
Sbjct: 67  IETQVLEEVASYRRLVVATGG---GIVIRPENWSYLQQGLVIWL 107

[Close]

BLAST of Lcy11g019720 vs. ExPASy Swiss-Prot
Match: Q46HR4 (Shikimate kinase OS=Prochlorococcus marinus (strain NATL2A) OX=59920 GN=aroK PE=3 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 1.2e-04
Identity = 32/104 (30.77%), Postives = 48/104 (46.15%), Query Frame = 0


Query: 180 LKGTSIYLIGDSTDINQRVAHELAVGLGYTPLSTKELLETFSKQTIDSWMLAEGSDSVAQ 239
           L G +I+LIG       +    LA  + Y  + T +++E  SKQ+I S    +G      
Sbjct: 14  LGGRNIFLIGMMGSGKSQTGPVLAKMINYAFVDTDDVIEKASKQSISSIFEKDGEKVFRD 73

Query: 240 AENAVLESLSSHVRAVVATLGGQPGAAGRTDTWRHLYAGFTVWL 284
            E  VL+ +S H   V+AT G   G     + W  L+ G  +WL
Sbjct: 74  VEKKVLKEISQHHSLVIATGG---GLVTLPENWGILHQGIVIWL 114

[Close]

BLAST of Lcy11g019720 vs. ExPASy TrEMBL
Match: A0A6J1CUQ8 (probable inactive shikimate kinase like 2, chloroplastic isoform X2 OS=Momordica charantia OX=3673 GN=LOC111014761 PE=4 SV=1)

HSP 1 Score: 606.7 bits (1563), Expect = 7.2e-170
Identity = 316/348 (90.80%), Postives = 334/348 (95.98%), Query Frame = 0


Query: 1   MASTTFTSALSLFSQNPIRNLEFSSPILSTITNGVEFASNSIALTSSAGLSPATSRFGSR 60
           MAST+FT+AL  FSQNPI+NLEFSSPIL +ITNGVEFASNSIALTSSAGLSPATSRF SR
Sbjct: 1   MASTSFTTALCFFSQNPIKNLEFSSPILFSITNGVEFASNSIALTSSAGLSPATSRFSSR 60

Query: 61  FTRSCSSSTAPVRSLDYEFTDGSSEVELRLQLGTQEIRSSKDVFVDANETSLTIKVQCSG 120
           F R+CSSST PVR+LDYEFTDGSSEVELRLQLGTQEIRSSKD+FVDANETSLTI+VQ +G
Sbjct: 61  FARNCSSSTTPVRTLDYEFTDGSSEVELRLQLGTQEIRSSKDIFVDANETSLTIRVQRTG 120

Query: 121 STITLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGSTQLL 180
           S ITLLETKQLFEKIKP+ETIWYIDEDQLVI+LKKHD DLKWPDIVESWESLTAGSTQLL
Sbjct: 121 SIITLLETKQLFEKIKPSETIWYIDEDQLVINLKKHDSDLKWPDIVESWESLTAGSTQLL 180

Query: 181 KGTSIYLIGDSTDINQRVAHELAVGLGYTPLSTKELLETFSKQTIDSWMLAEGSDSVAQA 240
           KGTSIYLIGDSTDINQ+VAHELAVGLGYTPLSTKELLETFSKQTIDSWMLAEGS++VAQA
Sbjct: 181 KGTSIYLIGDSTDINQKVAHELAVGLGYTPLSTKELLETFSKQTIDSWMLAEGSNAVAQA 240

Query: 241 ENAVLESLSSHVRAVVATLGGQPGAAGRTDTWRHLYAGFTVWLSQTEATDESAAKEEARR 300
           E AVLESLSSHVRAVVATLGG+ GAAGRTD WRHLYAGFTVWLSQTEA DESAAKEEARR
Sbjct: 241 ETAVLESLSSHVRAVVATLGGEQGAAGRTDAWRHLYAGFTVWLSQTEAKDESAAKEEARR 300

Query: 301 HMQDSRLAYSNAEVVVKLQGWDNAHSKAVAQAALSALKQLILSDKNLP 349
           HMQDS++AYSNAEVVVKLQGWD+AHSKAVAQAALSALKQL LSDKNLP
Sbjct: 301 HMQDSKVAYSNAEVVVKLQGWDDAHSKAVAQAALSALKQLTLSDKNLP 348

[Close]

BLAST of Lcy11g019720 vs. ExPASy TrEMBL
Match: A0A6J1CVH5 (probable inactive shikimate kinase like 2, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014761 PE=4 SV=1)

HSP 1 Score: 606.7 bits (1563), Expect = 7.2e-170
Identity = 316/348 (90.80%), Postives = 334/348 (95.98%), Query Frame = 0


Query: 1   MASTTFTSALSLFSQNPIRNLEFSSPILSTITNGVEFASNSIALTSSAGLSPATSRFGSR 60
           MAST+FT+AL  FSQNPI+NLEFSSPIL +ITNGVEFASNSIALTSSAGLSPATSRF SR
Sbjct: 1   MASTSFTTALCFFSQNPIKNLEFSSPILFSITNGVEFASNSIALTSSAGLSPATSRFSSR 60

Query: 61  FTRSCSSSTAPVRSLDYEFTDGSSEVELRLQLGTQEIRSSKDVFVDANETSLTIKVQCSG 120
           F R+CSSST PVR+LDYEFTDGSSEVELRLQLGTQEIRSSKD+FVDANETSLTI+VQ +G
Sbjct: 61  FARNCSSSTTPVRTLDYEFTDGSSEVELRLQLGTQEIRSSKDIFVDANETSLTIRVQRTG 120

Query: 121 STITLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGSTQLL 180
           S ITLLETKQLFEKIKP+ETIWYIDEDQLVI+LKKHD DLKWPDIVESWESLTAGSTQLL
Sbjct: 121 SIITLLETKQLFEKIKPSETIWYIDEDQLVINLKKHDSDLKWPDIVESWESLTAGSTQLL 180

Query: 181 KGTSIYLIGDSTDINQRVAHELAVGLGYTPLSTKELLETFSKQTIDSWMLAEGSDSVAQA 240
           KGTSIYLIGDSTDINQ+VAHELAVGLGYTPLSTKELLETFSKQTIDSWMLAEGS++VAQA
Sbjct: 181 KGTSIYLIGDSTDINQKVAHELAVGLGYTPLSTKELLETFSKQTIDSWMLAEGSNAVAQA 240

Query: 241 ENAVLESLSSHVRAVVATLGGQPGAAGRTDTWRHLYAGFTVWLSQTEATDESAAKEEARR 300
           E AVLESLSSHVRAVVATLGG+ GAAGRTD WRHLYAGFTVWLSQTEA DESAAKEEARR
Sbjct: 241 ETAVLESLSSHVRAVVATLGGEQGAAGRTDAWRHLYAGFTVWLSQTEAKDESAAKEEARR 300

Query: 301 HMQDSRLAYSNAEVVVKLQGWDNAHSKAVAQAALSALKQLILSDKNLP 349
           HMQDS++AYSNAEVVVKLQGWD+AHSKAVAQAALSALKQL LSDKNLP
Sbjct: 301 HMQDSKVAYSNAEVVVKLQGWDDAHSKAVAQAALSALKQLTLSDKNLP 348

[Close]

BLAST of Lcy11g019720 vs. ExPASy TrEMBL
Match: A0A6J1HQS7 (probable inactive shikimate kinase like 2, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111465239 PE=4 SV=1)

HSP 1 Score: 597.0 bits (1538), Expect = 5.7e-167
Identity = 312/348 (89.66%), Postives = 328/348 (94.25%), Query Frame = 0


Query: 1   MASTTFTSALSLFSQNPIRNLEFSSPILSTITNGVEFASNSIALTSSAGLSPATSRFGSR 60
           MAS +FTSAL  FSQN IRNLE SSPI  + +NGVEFASNSI LTS  GL PATSR  SR
Sbjct: 1   MASASFTSALCFFSQNTIRNLEVSSPIFYSSSNGVEFASNSIGLTSCTGLPPATSRLSSR 60

Query: 61  FTRSCSSSTAPVRSLDYEFTDGSSEVELRLQLGTQEIRSSKDVFVDANETSLTIKVQCSG 120
           FTR+CSSSTAPVR+LDYEFTDGSSEVELRLQL TQ+IRSSKDVFVDANETSLTI+V+  G
Sbjct: 61  FTRNCSSSTAPVRTLDYEFTDGSSEVELRLQLETQDIRSSKDVFVDANETSLTIRVRRLG 120

Query: 121 STITLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGSTQLL 180
           S +TLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGSTQLL
Sbjct: 121 SIVTLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGSTQLL 180

Query: 181 KGTSIYLIGDSTDINQRVAHELAVGLGYTPLSTKELLETFSKQTIDSWMLAEGSDSVAQA 240
           KGTSIYLIGD+TDINQ+VAHELAVGLGYTPLSTKELLETFSKQ IDSWMLAEGSD+VAQA
Sbjct: 181 KGTSIYLIGDATDINQKVAHELAVGLGYTPLSTKELLETFSKQNIDSWMLAEGSDAVAQA 240

Query: 241 ENAVLESLSSHVRAVVATLGGQPGAAGRTDTWRHLYAGFTVWLSQTEATDESAAKEEARR 300
           ENAVLESLSSHVR VVATLGG+PGAAGRTDTWRHLYAGFTVWLSQTEATDESAAKEEARR
Sbjct: 241 ENAVLESLSSHVRTVVATLGGRPGAAGRTDTWRHLYAGFTVWLSQTEATDESAAKEEARR 300

Query: 301 HMQDSRLAYSNAEVVVKLQGWDNAHSKAVAQAALSALKQLILSDKNLP 349
           HMQDS++AYSNAEVVVKLQGWD+AHSKAVAQAALSALKQLILSDKNLP
Sbjct: 301 HMQDSKVAYSNAEVVVKLQGWDDAHSKAVAQAALSALKQLILSDKNLP 348

[Close]

BLAST of Lcy11g019720 vs. ExPASy TrEMBL
Match: A0A6J1EA09 (probable inactive shikimate kinase like 2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111431221 PE=4 SV=1)

HSP 1 Score: 590.5 bits (1521), Expect = 5.3e-165
Identity = 311/349 (89.11%), Postives = 327/349 (93.70%), Query Frame = 0


Query: 1   MASTTFTSALSLFSQNPIRNLEF-SSPILSTITNGVEFASNSIALTSSAGLSPATSRFGS 60
           MAS +FTSAL  FSQNPIRNLE  SSPI  + +NGVEFASNSI LTS  GLSPATSR  S
Sbjct: 1   MASASFTSALCFFSQNPIRNLEVSSSPIFYSSSNGVEFASNSIVLTSCTGLSPATSRLSS 60

Query: 61  RFTRSCSSSTAPVRSLDYEFTDGSSEVELRLQLGTQEIRSSKDVFVDANETSLTIKVQCS 120
           RF R+CSSSTAPVR+LDYEFTDGSSEVELRLQL TQ+IRSSKDVFVDANETSLTI+V+  
Sbjct: 61  RFIRNCSSSTAPVRTLDYEFTDGSSEVELRLQLETQDIRSSKDVFVDANETSLTIRVRRL 120

Query: 121 GSTITLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGSTQL 180
           GS +TLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGSTQL
Sbjct: 121 GSIVTLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGSTQL 180

Query: 181 LKGTSIYLIGDSTDINQRVAHELAVGLGYTPLSTKELLETFSKQTIDSWMLAEGSDSVAQ 240
           LKGTSIYLIGD+TDINQ VAHELAVGLGYTPLSTKELLETFSKQ IDSWMLAEGSD+VAQ
Sbjct: 181 LKGTSIYLIGDATDINQTVAHELAVGLGYTPLSTKELLETFSKQNIDSWMLAEGSDAVAQ 240

Query: 241 AENAVLESLSSHVRAVVATLGGQPGAAGRTDTWRHLYAGFTVWLSQTEATDESAAKEEAR 300
           AENAVLESLSSHVR VVATLGG+ GAAGRTDTWRHLYAGFTVWLSQTEATDESAAKEEAR
Sbjct: 241 AENAVLESLSSHVRTVVATLGGRQGAAGRTDTWRHLYAGFTVWLSQTEATDESAAKEEAR 300

Query: 301 RHMQDSRLAYSNAEVVVKLQGWDNAHSKAVAQAALSALKQLILSDKNLP 349
           RHMQDS++AYSNAEVVVKLQGWD+AHSKAVAQAALSALKQL+LSDKNLP
Sbjct: 301 RHMQDSKVAYSNAEVVVKLQGWDDAHSKAVAQAALSALKQLVLSDKNLP 349

[Close]

BLAST of Lcy11g019720 vs. ExPASy TrEMBL
Match: A0A1S3BL22 (probable inactive shikimate kinase like 2, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490754 PE=4 SV=1)

HSP 1 Score: 588.6 bits (1516), Expect = 2.0e-164
Identity = 307/348 (88.22%), Postives = 330/348 (94.83%), Query Frame = 0


Query: 1   MASTTFTSALSLFSQNPIRNLEFSSPILSTITNGVEFASNSIALTSSAGLSPATSRFGSR 60
           MAST+FTSAL  FSQNPIRNL+FSSPI S+ ++GV F+S S ALTS + LSP+ SRF SR
Sbjct: 1   MASTSFTSALCFFSQNPIRNLQFSSPISSSSSSGVAFSSISTALTSCSSLSPSNSRFSSR 60

Query: 61  FTRSCSSSTAPVRSLDYEFTDGSSEVELRLQLGTQEIRSSKDVFVDANETSLTIKVQCSG 120
           FTR+CSSSTAPVR+LDYEFTD SSEVELRLQLGTQ+IRSSKDV+VDANETSLTI+VQ  G
Sbjct: 61  FTRNCSSSTAPVRTLDYEFTDSSSEVELRLQLGTQDIRSSKDVYVDANETSLTIRVQRLG 120

Query: 121 STITLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGSTQLL 180
           S ITLLETKQLFEKIKPAETIWYIDEDQLVI+LKKHDPDLKWPDIVESWESLTAGSTQLL
Sbjct: 121 SIITLLETKQLFEKIKPAETIWYIDEDQLVINLKKHDPDLKWPDIVESWESLTAGSTQLL 180

Query: 181 KGTSIYLIGDSTDINQRVAHELAVGLGYTPLSTKELLETFSKQTIDSWMLAEGSDSVAQA 240
           KGTSI+LIGDSTDINQ+VAHELAVGLGYTPLSTKELLETFSKQTIDSWMLAEGS++VAQA
Sbjct: 181 KGTSIFLIGDSTDINQKVAHELAVGLGYTPLSTKELLETFSKQTIDSWMLAEGSNAVAQA 240

Query: 241 ENAVLESLSSHVRAVVATLGGQPGAAGRTDTWRHLYAGFTVWLSQTEATDESAAKEEARR 300
           EN V+ESLSSHVRAVVATLGG+ GAAGRTDTWRHLYAGFTVWLSQTEATDESAAKEEA+R
Sbjct: 241 ENTVIESLSSHVRAVVATLGGRLGAAGRTDTWRHLYAGFTVWLSQTEATDESAAKEEAKR 300

Query: 301 HMQDSRLAYSNAEVVVKLQGWDNAHSKAVAQAALSALKQLILSDKNLP 349
           HMQDS+LAYSNAEVVVKLQGWD+AHSK VAQAALSALKQLILSDKNLP
Sbjct: 301 HMQDSQLAYSNAEVVVKLQGWDDAHSKVVAQAALSALKQLILSDKNLP 348

[Close]

BLAST of Lcy11g019720 vs. NCBI nr
Match: XP_022145268.1 (probable inactive shikimate kinase like 2, chloroplastic isoform X1 [Momordica charantia])

HSP 1 Score: 606.7 bits (1563), Expect = 1.5e-169
Identity = 316/348 (90.80%), Postives = 334/348 (95.98%), Query Frame = 0


Query: 1   MASTTFTSALSLFSQNPIRNLEFSSPILSTITNGVEFASNSIALTSSAGLSPATSRFGSR 60
           MAST+FT+AL  FSQNPI+NLEFSSPIL +ITNGVEFASNSIALTSSAGLSPATSRF SR
Sbjct: 1   MASTSFTTALCFFSQNPIKNLEFSSPILFSITNGVEFASNSIALTSSAGLSPATSRFSSR 60

Query: 61  FTRSCSSSTAPVRSLDYEFTDGSSEVELRLQLGTQEIRSSKDVFVDANETSLTIKVQCSG 120
           F R+CSSST PVR+LDYEFTDGSSEVELRLQLGTQEIRSSKD+FVDANETSLTI+VQ +G
Sbjct: 61  FARNCSSSTTPVRTLDYEFTDGSSEVELRLQLGTQEIRSSKDIFVDANETSLTIRVQRTG 120

Query: 121 STITLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGSTQLL 180
           S ITLLETKQLFEKIKP+ETIWYIDEDQLVI+LKKHD DLKWPDIVESWESLTAGSTQLL
Sbjct: 121 SIITLLETKQLFEKIKPSETIWYIDEDQLVINLKKHDSDLKWPDIVESWESLTAGSTQLL 180

Query: 181 KGTSIYLIGDSTDINQRVAHELAVGLGYTPLSTKELLETFSKQTIDSWMLAEGSDSVAQA 240
           KGTSIYLIGDSTDINQ+VAHELAVGLGYTPLSTKELLETFSKQTIDSWMLAEGS++VAQA
Sbjct: 181 KGTSIYLIGDSTDINQKVAHELAVGLGYTPLSTKELLETFSKQTIDSWMLAEGSNAVAQA 240

Query: 241 ENAVLESLSSHVRAVVATLGGQPGAAGRTDTWRHLYAGFTVWLSQTEATDESAAKEEARR 300
           E AVLESLSSHVRAVVATLGG+ GAAGRTD WRHLYAGFTVWLSQTEA DESAAKEEARR
Sbjct: 241 ETAVLESLSSHVRAVVATLGGEQGAAGRTDAWRHLYAGFTVWLSQTEAKDESAAKEEARR 300

Query: 301 HMQDSRLAYSNAEVVVKLQGWDNAHSKAVAQAALSALKQLILSDKNLP 349
           HMQDS++AYSNAEVVVKLQGWD+AHSKAVAQAALSALKQL LSDKNLP
Sbjct: 301 HMQDSKVAYSNAEVVVKLQGWDDAHSKAVAQAALSALKQLTLSDKNLP 348

[Close]

BLAST of Lcy11g019720 vs. NCBI nr
Match: XP_022145269.1 (probable inactive shikimate kinase like 2, chloroplastic isoform X2 [Momordica charantia])

HSP 1 Score: 606.7 bits (1563), Expect = 1.5e-169
Identity = 316/348 (90.80%), Postives = 334/348 (95.98%), Query Frame = 0


Query: 1   MASTTFTSALSLFSQNPIRNLEFSSPILSTITNGVEFASNSIALTSSAGLSPATSRFGSR 60
           MAST+FT+AL  FSQNPI+NLEFSSPIL +ITNGVEFASNSIALTSSAGLSPATSRF SR
Sbjct: 1   MASTSFTTALCFFSQNPIKNLEFSSPILFSITNGVEFASNSIALTSSAGLSPATSRFSSR 60

Query: 61  FTRSCSSSTAPVRSLDYEFTDGSSEVELRLQLGTQEIRSSKDVFVDANETSLTIKVQCSG 120
           F R+CSSST PVR+LDYEFTDGSSEVELRLQLGTQEIRSSKD+FVDANETSLTI+VQ +G
Sbjct: 61  FARNCSSSTTPVRTLDYEFTDGSSEVELRLQLGTQEIRSSKDIFVDANETSLTIRVQRTG 120

Query: 121 STITLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGSTQLL 180
           S ITLLETKQLFEKIKP+ETIWYIDEDQLVI+LKKHD DLKWPDIVESWESLTAGSTQLL
Sbjct: 121 SIITLLETKQLFEKIKPSETIWYIDEDQLVINLKKHDSDLKWPDIVESWESLTAGSTQLL 180

Query: 181 KGTSIYLIGDSTDINQRVAHELAVGLGYTPLSTKELLETFSKQTIDSWMLAEGSDSVAQA 240
           KGTSIYLIGDSTDINQ+VAHELAVGLGYTPLSTKELLETFSKQTIDSWMLAEGS++VAQA
Sbjct: 181 KGTSIYLIGDSTDINQKVAHELAVGLGYTPLSTKELLETFSKQTIDSWMLAEGSNAVAQA 240

Query: 241 ENAVLESLSSHVRAVVATLGGQPGAAGRTDTWRHLYAGFTVWLSQTEATDESAAKEEARR 300
           E AVLESLSSHVRAVVATLGG+ GAAGRTD WRHLYAGFTVWLSQTEA DESAAKEEARR
Sbjct: 241 ETAVLESLSSHVRAVVATLGGEQGAAGRTDAWRHLYAGFTVWLSQTEAKDESAAKEEARR 300

Query: 301 HMQDSRLAYSNAEVVVKLQGWDNAHSKAVAQAALSALKQLILSDKNLP 349
           HMQDS++AYSNAEVVVKLQGWD+AHSKAVAQAALSALKQL LSDKNLP
Sbjct: 301 HMQDSKVAYSNAEVVVKLQGWDDAHSKAVAQAALSALKQLTLSDKNLP 348

[Close]

BLAST of Lcy11g019720 vs. NCBI nr
Match: XP_023553268.1 (probable inactive shikimate kinase like 2, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo] >XP_023553269.1 probable inactive shikimate kinase like 2, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 599.4 bits (1544), Expect = 2.4e-167
Identity = 315/349 (90.26%), Postives = 330/349 (94.56%), Query Frame = 0


Query: 1   MASTTFTSALSLFSQNPIRNLEF-SSPILSTITNGVEFASNSIALTSSAGLSPATSRFGS 60
           MAS +FTSAL  FSQNPIRNLE  SSPI  + +NGVEFASNSI LTS  GLSPATSRF S
Sbjct: 1   MASASFTSALCFFSQNPIRNLEVSSSPIFYSSSNGVEFASNSIGLTSCTGLSPATSRFSS 60

Query: 61  RFTRSCSSSTAPVRSLDYEFTDGSSEVELRLQLGTQEIRSSKDVFVDANETSLTIKVQCS 120
           RFTR+CSSSTAPVR+LDYEFTDGSSEVELRLQL TQ+IRSSKD FVDANETSLTI+V+  
Sbjct: 61  RFTRNCSSSTAPVRTLDYEFTDGSSEVELRLQLETQDIRSSKDAFVDANETSLTIRVRRL 120

Query: 121 GSTITLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGSTQL 180
           GS +TLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGSTQL
Sbjct: 121 GSIVTLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGSTQL 180

Query: 181 LKGTSIYLIGDSTDINQRVAHELAVGLGYTPLSTKELLETFSKQTIDSWMLAEGSDSVAQ 240
           LKGTSIYLIGDSTDINQ+VAHELAVGLGYTPLSTKELLETFSKQ IDSWMLAEGSD+VAQ
Sbjct: 181 LKGTSIYLIGDSTDINQKVAHELAVGLGYTPLSTKELLETFSKQNIDSWMLAEGSDAVAQ 240

Query: 241 AENAVLESLSSHVRAVVATLGGQPGAAGRTDTWRHLYAGFTVWLSQTEATDESAAKEEAR 300
           AENAVLESLSSHVR VVATLGG+PGAAGRTDTWRHLYAGFTVWLSQTEATDESAAKEEAR
Sbjct: 241 AENAVLESLSSHVRTVVATLGGRPGAAGRTDTWRHLYAGFTVWLSQTEATDESAAKEEAR 300

Query: 301 RHMQDSRLAYSNAEVVVKLQGWDNAHSKAVAQAALSALKQLILSDKNLP 349
           RHMQDS++AYSNAEVVVKLQGWD+AHSKAVAQAALSALKQLILSDKNLP
Sbjct: 301 RHMQDSKVAYSNAEVVVKLQGWDDAHSKAVAQAALSALKQLILSDKNLP 349

[Close]

BLAST of Lcy11g019720 vs. NCBI nr
Match: XP_022965359.1 (probable inactive shikimate kinase like 2, chloroplastic [Cucurbita maxima])

HSP 1 Score: 597.0 bits (1538), Expect = 1.2e-166
Identity = 312/348 (89.66%), Postives = 328/348 (94.25%), Query Frame = 0


Query: 1   MASTTFTSALSLFSQNPIRNLEFSSPILSTITNGVEFASNSIALTSSAGLSPATSRFGSR 60
           MAS +FTSAL  FSQN IRNLE SSPI  + +NGVEFASNSI LTS  GL PATSR  SR
Sbjct: 1   MASASFTSALCFFSQNTIRNLEVSSPIFYSSSNGVEFASNSIGLTSCTGLPPATSRLSSR 60

Query: 61  FTRSCSSSTAPVRSLDYEFTDGSSEVELRLQLGTQEIRSSKDVFVDANETSLTIKVQCSG 120
           FTR+CSSSTAPVR+LDYEFTDGSSEVELRLQL TQ+IRSSKDVFVDANETSLTI+V+  G
Sbjct: 61  FTRNCSSSTAPVRTLDYEFTDGSSEVELRLQLETQDIRSSKDVFVDANETSLTIRVRRLG 120

Query: 121 STITLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGSTQLL 180
           S +TLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGSTQLL
Sbjct: 121 SIVTLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGSTQLL 180

Query: 181 KGTSIYLIGDSTDINQRVAHELAVGLGYTPLSTKELLETFSKQTIDSWMLAEGSDSVAQA 240
           KGTSIYLIGD+TDINQ+VAHELAVGLGYTPLSTKELLETFSKQ IDSWMLAEGSD+VAQA
Sbjct: 181 KGTSIYLIGDATDINQKVAHELAVGLGYTPLSTKELLETFSKQNIDSWMLAEGSDAVAQA 240

Query: 241 ENAVLESLSSHVRAVVATLGGQPGAAGRTDTWRHLYAGFTVWLSQTEATDESAAKEEARR 300
           ENAVLESLSSHVR VVATLGG+PGAAGRTDTWRHLYAGFTVWLSQTEATDESAAKEEARR
Sbjct: 241 ENAVLESLSSHVRTVVATLGGRPGAAGRTDTWRHLYAGFTVWLSQTEATDESAAKEEARR 300

Query: 301 HMQDSRLAYSNAEVVVKLQGWDNAHSKAVAQAALSALKQLILSDKNLP 349
           HMQDS++AYSNAEVVVKLQGWD+AHSKAVAQAALSALKQLILSDKNLP
Sbjct: 301 HMQDSKVAYSNAEVVVKLQGWDDAHSKAVAQAALSALKQLILSDKNLP 348

[Close]

BLAST of Lcy11g019720 vs. NCBI nr
Match: XP_038892435.1 (probable inactive shikimate kinase like 2, chloroplastic [Benincasa hispida])

HSP 1 Score: 592.0 bits (1525), Expect = 3.8e-165
Identity = 311/348 (89.37%), Postives = 330/348 (94.83%), Query Frame = 0


Query: 1   MASTTFTSALSLFSQNPIRNLEFSSPILSTITNGVEFASNSIALTSSAGLSPATSRFGSR 60
           MAST+ TSAL LFSQNP R+L+FSS I S+ +N V FASNSI LTSSA LSP+TSRF SR
Sbjct: 1   MASTSLTSALCLFSQNPTRSLQFSSSIFSSCSNVVAFASNSIGLTSSANLSPSTSRFSSR 60

Query: 61  FTRSCSSSTAPVRSLDYEFTDGSSEVELRLQLGTQEIRSSKDVFVDANETSLTIKVQCSG 120
           FTR+CSSSTAPVR+LDYEFTD SSEVELRLQLGTQ+IRSSKDV+VDANETSLTI+VQ  G
Sbjct: 61  FTRNCSSSTAPVRTLDYEFTDSSSEVELRLQLGTQDIRSSKDVYVDANETSLTIRVQRLG 120

Query: 121 STITLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGSTQLL 180
           S ITLLETKQLFEKIKPAETIWYIDEDQLVI+LKKHDPDLKWPDIVESWESLTAGSTQLL
Sbjct: 121 SIITLLETKQLFEKIKPAETIWYIDEDQLVINLKKHDPDLKWPDIVESWESLTAGSTQLL 180

Query: 181 KGTSIYLIGDSTDINQRVAHELAVGLGYTPLSTKELLETFSKQTIDSWMLAEGSDSVAQA 240
           KGTSI+LIGDSTDINQ+VAHELAVGLGYTPLSTKELLETFSKQTI+SWMLAEG ++VAQA
Sbjct: 181 KGTSIFLIGDSTDINQKVAHELAVGLGYTPLSTKELLETFSKQTINSWMLAEGFEAVAQA 240

Query: 241 ENAVLESLSSHVRAVVATLGGQPGAAGRTDTWRHLYAGFTVWLSQTEATDESAAKEEARR 300
           EN VLESLSSHVRAVVATLGGQ GAAGRTDTWRHLYAGFTVWLSQTEATDESAAKEEARR
Sbjct: 241 ENTVLESLSSHVRAVVATLGGQLGAAGRTDTWRHLYAGFTVWLSQTEATDESAAKEEARR 300

Query: 301 HMQDSRLAYSNAEVVVKLQGWDNAHSKAVAQAALSALKQLILSDKNLP 349
           HMQDS+LAYSNAEVVVKLQGWD+AHSKAVAQAALSALKQLILSDKNLP
Sbjct: 301 HMQDSKLAYSNAEVVVKLQGWDDAHSKAVAQAALSALKQLILSDKNLP 348

[Close]

BLAST of Lcy11g019720 vs. TAIR 10
Match: AT2G35500.1 (shikimate kinase like 2 )

HSP 1 Score: 404.8 bits (1039), Expect = 8.0e-113
Identity = 217/341 (63.64%), Postives = 264/341 (77.42%), Query Frame = 0


Query: 23  FSSPILSTITNGVEFASNSIALTSS---AGLSPATSRFGSRFTR----------SCSS-S 82
           F+SP L+ +T    F S++   +S    +G      R   RF++          SC+  S
Sbjct: 12  FNSPSLNPVTTQATFLSSNRIRSSPRVFSGFHSLRRRGFRRFSQNVIPDRFNSFSCNCLS 71

Query: 83  TAPVRSLDYEFTDGSSEVELRLQLGTQEIRSSKDVFVDANETSLTIKVQCSGSTITLLET 142
                ++DYEFTDG  EVELRL+L T EI S KD+ VDA+ TSL +K + +G  ITLLET
Sbjct: 72  AVSTSTIDYEFTDGGKEVELRLRLKTGEILSPKDISVDADGTSLAVKEKRNGLLITLLET 131

Query: 143 KQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGSTQLLKGTSIYLI 202
             LFEKI P+ETIWYIDEDQLV+++KK D +LKWPDIVESWESLTAG  QLLKG SIY++
Sbjct: 132 NHLFEKIMPSETIWYIDEDQLVVNMKKVDGELKWPDIVESWESLTAGMMQLLKGASIYIV 191

Query: 203 GDSTDINQRVAHELAVGLGYTPLSTKELLETFSKQTIDSWMLAEGSDSVAQAENAVLESL 262
           GDST+INQ+V+ ELAVGLGY+PL +KELLE+FSKQTIDSW+LAEG DSVA+AE++VLESL
Sbjct: 192 GDSTEINQKVSRELAVGLGYSPLDSKELLESFSKQTIDSWILAEGPDSVAEAESSVLESL 251

Query: 263 SSHVRAVVATLGGQPGAAGRTDTWRHLYAGFTVWLSQTEATDESAAKEEARRHMQDSRLA 322
           SSHVR VV+TLGG+ GAAGR D WRHLY+GFTVW+SQTEATDE +AKEEARR  Q+  + 
Sbjct: 252 SSHVRTVVSTLGGKHGAAGRADQWRHLYSGFTVWVSQTEATDEESAKEEARRSKQEREIG 311

Query: 323 YSNAEVVVKLQGWDNAHSKAVAQAALSALKQLILSDKNLPG 350
           YSNA+VVVKLQGWD  H+K+VAQA+LSALKQLI+SDK LPG
Sbjct: 312 YSNADVVVKLQGWDPTHAKSVAQASLSALKQLIISDKGLPG 352

The following BLAST results are available for this feature:

BLAST of Lcy11g019720 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82290	1.1e-111	63.64	Probable inactive shikimate kinase like 2, chloroplastic OS=Arabidopsis thaliana...	[more]
Q31PU5	5.7e-07	32.69	Shikimate kinase OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=114...	[more]
Q5N4D3	5.7e-07	32.69	Shikimate kinase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/...	[more]
Q46HR4	1.2e-04	30.77	Shikimate kinase OS=Prochlorococcus marinus (strain NATL2A) OX=59920 GN=aroK PE=...	[more]

BLAST of Lcy11g019720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CUQ8	7.2e-170	90.80	probable inactive shikimate kinase like 2, chloroplastic isoform X2 OS=Momordica...	[more]
A0A6J1CVH5	7.2e-170	90.80	probable inactive shikimate kinase like 2, chloroplastic isoform X1 OS=Momordica...	[more]
A0A6J1HQS7	5.7e-167	89.66	probable inactive shikimate kinase like 2, chloroplastic OS=Cucurbita maxima OX=...	[more]
A0A6J1EA09	5.3e-165	89.11	probable inactive shikimate kinase like 2, chloroplastic OS=Cucurbita moschata O...	[more]
A0A1S3BL22	2.0e-164	88.22	probable inactive shikimate kinase like 2, chloroplastic isoform X1 OS=Cucumis m...	[more]

BLAST of Lcy11g019720 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145268.1	1.5e-169	90.80	probable inactive shikimate kinase like 2, chloroplastic isoform X1 [Momordica c...	[more]
XP_022145269.1	1.5e-169	90.80	probable inactive shikimate kinase like 2, chloroplastic isoform X2 [Momordica c...	[more]
XP_023553268.1	2.4e-167	90.26	probable inactive shikimate kinase like 2, chloroplastic isoform X1 [Cucurbita p...	[more]
XP_022965359.1	1.2e-166	89.66	probable inactive shikimate kinase like 2, chloroplastic [Cucurbita maxima]	[more]
XP_038892435.1	3.8e-165	89.37	probable inactive shikimate kinase like 2, chloroplastic [Benincasa hispida]	[more]

BLAST of Lcy11g019720 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G35500.1	8.0e-113	63.64	shikimate kinase like 2	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007052	CS domain	PFAM	PF04969	CS	coord: 77..155 e-value: 3.7E-6 score: 27.9
IPR007052	CS domain	PROSITE	PS51203	CS	coord: 72..166 score: 11.814425
IPR031322	Shikimate kinase/gluconokinase	PFAM	PF01202	SKI	coord: 198..287 e-value: 3.3E-5 score: 24.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 175..348 e-value: 6.6E-12 score: 47.7
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 66..174 e-value: 2.9E-13 score: 51.9
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 68..170
None	No IPR available	PANTHER	PTHR21087	SHIKIMATE KINASE	coord: 77..349
None	No IPR available	PANTHER	PTHR21087:SF23	INACTIVE SHIKIMATE KINASE LIKE 2, CHLOROPLASTIC-RELATED	coord: 77..349
None	No IPR available	CDD	cd06467	p23_NUDC_like	coord: 77..166 e-value: 7.34823E-13 score: 61.7946

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g019720.1	Lcy11g019720.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
molecular_function	GO:0016301	kinase activity