Lcy11g019330 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g019330
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Resistance gene-like protein
Location	Chr11: 46676369 .. 46676611 (-)
RNA-Seq Expression	Lcy11g019330
Synteny	Lcy11g019330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGTTTCTTCTTCTTCTTCTTCTTTTTCTTCAAGTGGTAAATGGAAATATGATGTGTTTTTTAGCTTCAGAGGAGAAGATACATGTGGCGGCTTCACAGACCATCTGTACAAAGCCTTAGTACGTAAAGGAATCTTCACATTCAGAGATGAAGATGAGATCAAAGAAGGTAAGGACATTTCTTCAAATCTATTGGCAGCCATCGAAGCCTCCAGATTTGCGCTCGTTGTTGTGTCATAA

mRNA sequence

ATGGTGGTTTCTTCTTCTTCTTCTTCTTTTTCTTCAAGTGGTAAATGGAAATATGATGTGTTTTTTAGCTTCAGAGGAGAAGATACATGTGGCGGCTTCACAGACCATCTGTACAAAGCCTTAGTACGTAAAGGAATCTTCACATTCAGAGATGAAGATGAGATCAAAGAAGGTAAGGACATTTCTTCAAATCTATTGGCAGCCATCGAAGCCTCCAGATTTGCGCTCGTTGTTGTGTCATAA

Coding sequence (CDS)

ATGGTGGTTTCTTCTTCTTCTTCTTCTTTTTCTTCAAGTGGTAAATGGAAATATGATGTGTTTTTTAGCTTCAGAGGAGAAGATACATGTGGCGGCTTCACAGACCATCTGTACAAAGCCTTAGTACGTAAAGGAATCTTCACATTCAGAGATGAAGATGAGATCAAAGAAGGTAAGGACATTTCTTCAAATCTATTGGCAGCCATCGAAGCCTCCAGATTTGCGCTCGTTGTTGTGTCATAA

Protein sequence

MVVSSSSSSFSSSGKWKYDVFFSFRGEDTCGGFTDHLYKALVRKGIFTFRDEDEIKEGKDISSNLLAAIEASRFALVVVS

Homology

[Close]

BLAST of Lcy11g019330 vs. ExPASy Swiss-Prot
Match: A0A290U7C4 (Disease resistance protein Roq1 OS=Nicotiana benthamiana OX=4100 GN=ROQ1 PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.8e-13
Identity = 42/73 (57.53%), Postives = 50/73 (68.49%), Query Frame = 0


Query: 8  SSFSSSGKWKYDVFFSFRGEDTCGGFTDHLYKALVRKGIFTFRDEDEIKEGKDISSNLLA 67
          +S S  G+  YDVF SFRGEDT   F  HL+ AL+ KGI TF D+ E+K GK ISS L+ 
Sbjct: 3  TSSSHHGR-SYDVFLSFRGEDTRKTFVGHLFNALIEKGIHTFMDDKELKRGKSISSELMK 62

Query: 68 AIEASRFALVVVS 81
          AI  SRFA+VV S
Sbjct: 63 AIGESRFAVVVFS 74

[Close]

BLAST of Lcy11g019330 vs. ExPASy Swiss-Prot
Match: Q40392 (TMV resistance protein N OS=Nicotiana glutinosa OX=35889 GN=N PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.8e-13
Identity = 40/73 (54.79%), Postives = 49/73 (67.12%), Query Frame = 0


Query: 8  SSFSSSGKWKYDVFFSFRGEDTCGGFTDHLYKALVRKGIFTFRDEDEIKEGKDISSNLLA 67
          +S SSS +W YDVF SFRGEDT   FT HLY+ L  KGI TF+D+  ++ G  I   L  
Sbjct: 2  ASSSSSSRWSYDVFLSFRGEDTRKTFTSHLYEVLNDKGIKTFQDDKRLEYGATIPGELCK 61

Query: 68 AIEASRFALVVVS 81
          AIE S+FA+VV S
Sbjct: 62 AIEESQFAIVVFS 74

[Close]

BLAST of Lcy11g019330 vs. ExPASy Swiss-Prot
Match: V9M2S5 (Disease resistance protein RPV1 OS=Vitis rotundifolia OX=103349 GN=RPV1 PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 1.5e-12
Identity = 44/77 (57.14%), Postives = 53/77 (68.83%), Query Frame = 0


Query: 4  SSSSSSFSSSGKWKYDVFFSFRGEDTCGGFTDHLYKALVRKGIFTFRDEDEIKEGKDISS 63
          SSSSS+ S      YDVF SFRGEDT   FTDHLY AL R+GI TFRD D ++ G+ I+ 
Sbjct: 10 SSSSSTPSIPRTTTYDVFLSFRGEDTRYNFTDHLYSALGRRGIRTFRD-DRLRRGEAIAP 69

Query: 64 NLLAAIEASRFALVVVS 81
           LL AIE SR +++V S
Sbjct: 70 ELLKAIEESRSSVIVFS 85

[Close]

BLAST of Lcy11g019330 vs. ExPASy Swiss-Prot
Match: V9M398 (Disease resistance protein RUN1 OS=Vitis rotundifolia OX=103349 GN=RUN1 PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 1.5e-12
Identity = 44/77 (57.14%), Postives = 54/77 (70.13%), Query Frame = 0


Query: 4  SSSSSSFSSSGKWKYDVFFSFRGEDTCGGFTDHLYKALVRKGIFTFRDEDEIKEGKDISS 63
          SSSSS+ S      YDVF SFRGEDT   FTDHLY AL R+GI TFRD D+++ G+ I+ 
Sbjct: 13 SSSSSTPSIPRTITYDVFLSFRGEDTRFNFTDHLYSALGRRGIRTFRD-DKLRRGEAIAP 72

Query: 64 NLLAAIEASRFALVVVS 81
           LL AIE SR +++V S
Sbjct: 73 ELLKAIEESRSSVIVFS 88

[Close]

BLAST of Lcy11g019330 vs. ExPASy Swiss-Prot
Match: Q9SSN3 (Toll/interleukin-1 receptor-like protein OS=Arabidopsis thaliana OX=3702 GN=TIR PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 9.9e-12
Identity = 38/70 (54.29%), Postives = 46/70 (65.71%), Query Frame = 0


Query: 11 SSSGKWKYDVFFSFRGEDTCGGFTDHLYKALVRKGIFTFRDEDEIKEGKDISSNLLAAIE 70
          SS    KYDVF SFRG DT   F   LYK LVR+ I TF+D+ E++ G+  S  L + IE
Sbjct: 2  SSHTATKYDVFLSFRGHDTRHNFISFLYKELVRRSIRTFKDDKELENGQRFSPELKSPIE 61

Query: 71 ASRFALVVVS 81
           SRFA+VVVS
Sbjct: 62 VSRFAVVVVS 71

[Close]

BLAST of Lcy11g019330 vs. ExPASy TrEMBL
Match: A0A6J1ECB1 (TMV resistance protein N-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111432772 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 3.3e-26
Identity = 66/80 (82.50%), Postives = 72/80 (90.00%), Query Frame = 0


Query: 1  MVVSSSSSSFSSSGKWKYDVFFSFRGEDTCGGFTDHLYKALVRKGIFTFRDEDEIKEGKD 60
          M+ SSSSSS SS+GKWKY+VF SFRGEDT GGFTDHLYKAL+ KGI TFRDEDEI+EGKD
Sbjct: 2  MLSSSSSSSSSSNGKWKYNVFLSFRGEDTRGGFTDHLYKALIHKGISTFRDEDEIEEGKD 61

Query: 61 ISSNLLAAIEASRFALVVVS 81
          ISS+L AAIEASR ALVVVS
Sbjct: 62 ISSDLFAAIEASRIALVVVS 81

[Close]

BLAST of Lcy11g019330 vs. ExPASy TrEMBL
Match: A0A1S3CBN9 (TMV resistance protein N-like OS=Cucumis melo OX=3656 GN=LOC103498654 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 2.8e-25
Identity = 64/80 (80.00%), Postives = 72/80 (90.00%), Query Frame = 0


Query: 1  MVVSSSSSSFSSSGKWKYDVFFSFRGEDTCGGFTDHLYKALVRKGIFTFRDEDEIKEGKD 60
          M +SSSSSS SS GKWK+DVF SFRGEDT GGFTDHLYKAL +KGI TFRDE+EI+EG+D
Sbjct: 1  MFLSSSSSSSSSIGKWKFDVFLSFRGEDTRGGFTDHLYKALTQKGISTFRDENEIQEGED 60

Query: 61 ISSNLLAAIEASRFALVVVS 81
          ISSNLL +IEASRFA+VVVS
Sbjct: 61 ISSNLLDSIEASRFAIVVVS 80

[Close]

BLAST of Lcy11g019330 vs. ExPASy TrEMBL
Match: Q5DMV0 (MRGH14 (Fragment) OS=Cucumis melo OX=3656 GN=MRGH14 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 2.8e-25
Identity = 64/80 (80.00%), Postives = 72/80 (90.00%), Query Frame = 0


Query: 1  MVVSSSSSSFSSSGKWKYDVFFSFRGEDTCGGFTDHLYKALVRKGIFTFRDEDEIKEGKD 60
          M +SSSSSS SS GKWK+DVF SFRGEDT GGFTDHLYKAL +KGI TFRDE+EI+EG+D
Sbjct: 1  MFLSSSSSSSSSIGKWKFDVFLSFRGEDTRGGFTDHLYKALTQKGISTFRDENEIQEGED 60

Query: 61 ISSNLLAAIEASRFALVVVS 81
          ISSNLL +IEASRFA+VVVS
Sbjct: 61 ISSNLLDSIEASRFAIVVVS 80

[Close]

BLAST of Lcy11g019330 vs. ExPASy TrEMBL
Match: A0A6J1EI44 (TMV resistance protein N-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111432772 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.4e-24
Identity = 62/74 (83.78%), Postives = 67/74 (90.54%), Query Frame = 0


Query: 7  SSSFSSSGKWKYDVFFSFRGEDTCGGFTDHLYKALVRKGIFTFRDEDEIKEGKDISSNLL 66
          SSS SS+GKWKY+VF SFRGEDT GGFTDHLYKAL+ KGI TFRDEDEI+EGKDISS+L 
Sbjct: 4  SSSSSSNGKWKYNVFLSFRGEDTRGGFTDHLYKALIHKGISTFRDEDEIEEGKDISSDLF 63

Query: 67 AAIEASRFALVVVS 81
          AAIEASR ALVVVS
Sbjct: 64 AAIEASRIALVVVS 77

[Close]

BLAST of Lcy11g019330 vs. ExPASy TrEMBL
Match: M4R4K0 (Resistance gene-like protein OS=Cucumis melo OX=3656 GN=RGH14 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 6.9e-24
Identity = 61/75 (81.33%), Postives = 68/75 (90.67%), Query Frame = 0


Query: 6  SSSSFSSSGKWKYDVFFSFRGEDTCGGFTDHLYKALVRKGIFTFRDEDEIKEGKDISSNL 65
          SSSS SS GKWK+DVF SFRGEDT GGFTDHLYKAL +KGI TFRDE+EI+EG+DISSNL
Sbjct: 4  SSSSSSSIGKWKFDVFLSFRGEDTRGGFTDHLYKALTQKGISTFRDENEIEEGEDISSNL 63

Query: 66 LAAIEASRFALVVVS 81
          L +IEASRFA+VVVS
Sbjct: 64 LDSIEASRFAIVVVS 78

[Close]

BLAST of Lcy11g019330 vs. NCBI nr
Match: KAG6592341.1 (Disease resistance protein RUN1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 129.4 bits (324), Expect = 1.4e-26
Identity = 66/80 (82.50%), Postives = 73/80 (91.25%), Query Frame = 0


Query: 1  MVVSSSSSSFSSSGKWKYDVFFSFRGEDTCGGFTDHLYKALVRKGIFTFRDEDEIKEGKD 60
          M++SSSSSSFSS+GKWKY+VF SFRGEDT GGFTDHLY AL+ KGI TFRDEDEI+EGKD
Sbjct: 1  MMLSSSSSSFSSNGKWKYNVFLSFRGEDTRGGFTDHLYNALIHKGISTFRDEDEIEEGKD 60

Query: 61 ISSNLLAAIEASRFALVVVS 81
          ISS+L AAIEASR ALVVVS
Sbjct: 61 ISSDLFAAIEASRIALVVVS 80

[Close]

BLAST of Lcy11g019330 vs. NCBI nr
Match: XP_022925484.1 (TMV resistance protein N-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 127.1 bits (318), Expect = 6.8e-26
Identity = 66/80 (82.50%), Postives = 72/80 (90.00%), Query Frame = 0


Query: 1  MVVSSSSSSFSSSGKWKYDVFFSFRGEDTCGGFTDHLYKALVRKGIFTFRDEDEIKEGKD 60
          M+ SSSSSS SS+GKWKY+VF SFRGEDT GGFTDHLYKAL+ KGI TFRDEDEI+EGKD
Sbjct: 2  MLSSSSSSSSSSNGKWKYNVFLSFRGEDTRGGFTDHLYKALIHKGISTFRDEDEIEEGKD 61

Query: 61 ISSNLLAAIEASRFALVVVS 81
          ISS+L AAIEASR ALVVVS
Sbjct: 62 ISSDLFAAIEASRIALVVVS 81

[Close]

BLAST of Lcy11g019330 vs. NCBI nr
Match: XP_008459550.1 (PREDICTED: TMV resistance protein N-like [Cucumis melo])

HSP 1 Score: 124.0 bits (310), Expect = 5.8e-25
Identity = 64/80 (80.00%), Postives = 72/80 (90.00%), Query Frame = 0


Query: 1  MVVSSSSSSFSSSGKWKYDVFFSFRGEDTCGGFTDHLYKALVRKGIFTFRDEDEIKEGKD 60
          M +SSSSSS SS GKWK+DVF SFRGEDT GGFTDHLYKAL +KGI TFRDE+EI+EG+D
Sbjct: 1  MFLSSSSSSSSSIGKWKFDVFLSFRGEDTRGGFTDHLYKALTQKGISTFRDENEIQEGED 60

Query: 61 ISSNLLAAIEASRFALVVVS 81
          ISSNLL +IEASRFA+VVVS
Sbjct: 61 ISSNLLDSIEASRFAIVVVS 80

[Close]

BLAST of Lcy11g019330 vs. NCBI nr
Match: AAU04776.1 (MRGH14, partial [Cucumis melo])

HSP 1 Score: 124.0 bits (310), Expect = 5.8e-25
Identity = 64/80 (80.00%), Postives = 72/80 (90.00%), Query Frame = 0


Query: 1  MVVSSSSSSFSSSGKWKYDVFFSFRGEDTCGGFTDHLYKALVRKGIFTFRDEDEIKEGKD 60
          M +SSSSSS SS GKWK+DVF SFRGEDT GGFTDHLYKAL +KGI TFRDE+EI+EG+D
Sbjct: 1  MFLSSSSSSSSSIGKWKFDVFLSFRGEDTRGGFTDHLYKALTQKGISTFRDENEIQEGED 60

Query: 61 ISSNLLAAIEASRFALVVVS 81
          ISSNLL +IEASRFA+VVVS
Sbjct: 61 ISSNLLDSIEASRFAIVVVS 80

[Close]

BLAST of Lcy11g019330 vs. NCBI nr
Match: XP_022925485.1 (TMV resistance protein N-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 121.7 bits (304), Expect = 2.9e-24
Identity = 62/74 (83.78%), Postives = 67/74 (90.54%), Query Frame = 0


Query: 7  SSSFSSSGKWKYDVFFSFRGEDTCGGFTDHLYKALVRKGIFTFRDEDEIKEGKDISSNLL 66
          SSS SS+GKWKY+VF SFRGEDT GGFTDHLYKAL+ KGI TFRDEDEI+EGKDISS+L 
Sbjct: 4  SSSSSSNGKWKYNVFLSFRGEDTRGGFTDHLYKALIHKGISTFRDEDEIEEGKDISSDLF 63

Query: 67 AAIEASRFALVVVS 81
          AAIEASR ALVVVS
Sbjct: 64 AAIEASRIALVVVS 77

[Close]

BLAST of Lcy11g019330 vs. TAIR 10
Match: AT1G72890.1 (Disease resistance protein (TIR-NBS class) )

HSP 1 Score: 75.1 bits (183), Expect = 2.9e-14
Identity = 43/77 (55.84%), Postives = 53/77 (68.83%), Query Frame = 0


Query: 4   SSSSSSFSSSGKWKYDVFFSFRGEDTCGGFTDHLYKALVRKGIFTFRDEDEIKEGKDISS 63
           S SSSS SS    K+DVF SFRG+DT   F   LYKALV KGI TF+D++E++ G+ I  
Sbjct: 25  SLSSSSSSSFTPQKFDVFLSFRGKDTRKNFVSFLYKALVSKGIRTFKDDEELERGRPIPP 84

Query: 64  NLLAAIEASRFALVVVS 81
            L  AI+ SR A+VVVS
Sbjct: 85  ELRQAIKGSRIAVVVVS 101

[Close]

BLAST of Lcy11g019330 vs. TAIR 10
Match: AT1G72890.2 (Disease resistance protein (TIR-NBS class) )

HSP 1 Score: 75.1 bits (183), Expect = 2.9e-14
Identity = 43/77 (55.84%), Postives = 53/77 (68.83%), Query Frame = 0


Query: 4   SSSSSSFSSSGKWKYDVFFSFRGEDTCGGFTDHLYKALVRKGIFTFRDEDEIKEGKDISS 63
           S SSSS SS    K+DVF SFRG+DT   F   LYKALV KGI TF+D++E++ G+ I  
Sbjct: 25  SLSSSSSSSFTPQKFDVFLSFRGKDTRKNFVSFLYKALVSKGIRTFKDDEELERGRPIPP 84

Query: 64  NLLAAIEASRFALVVVS 81
            L  AI+ SR A+VVVS
Sbjct: 85  ELRQAIKGSRIAVVVVS 101

[Close]

BLAST of Lcy11g019330 vs. TAIR 10
Match: AT1G17615.1 (Disease resistance protein (TIR-NBS class) )

HSP 1 Score: 74.7 bits (182), Expect = 3.7e-14
Identity = 40/75 (53.33%), Postives = 55/75 (73.33%), Query Frame = 0


Query: 6  SSSSFSSSGKWKYDVFFSFRGEDTCGGFTDHLYKALVRKGIFTFRDEDEIKEGKDISSNL 65
          SSSS SS+   K+DVF SFRG+DT   F   LYK L+  GI TF+D+ E++ G+ I+S+L
Sbjct: 3  SSSSSSSATPQKFDVFLSFRGKDTRRTFISFLYKELIEMGIRTFKDDVELQSGRRIASDL 62

Query: 66 LAAIEASRFALVVVS 81
          LAAIE S+ A+V++S
Sbjct: 63 LAAIENSKIAVVIIS 77

[Close]

BLAST of Lcy11g019330 vs. TAIR 10
Match: AT5G48770.1 (Disease resistance protein (TIR-NBS-LRR class) family )

HSP 1 Score: 74.7 bits (182), Expect = 3.7e-14
Identity = 41/75 (54.67%), Postives = 51/75 (68.00%), Query Frame = 0


Query: 6  SSSSFSSSGKWKYDVFFSFRGEDTCGGFTDHLYKALVRKGIFTFRDEDEIKEGKDISSNL 65
          +SSS SS     YDVF SFRGEDT      HLY AL  KGI TF+D+ +++ G  ISS+L
Sbjct: 2  ASSSLSSPPPCNYDVFLSFRGEDTRRTIVSHLYAALGAKGIITFKDDQDLEVGDHISSHL 61

Query: 66 LAAIEASRFALVVVS 81
            AIE S+FA+VV+S
Sbjct: 62 RRAIEGSKFAVVVLS 76

[Close]

BLAST of Lcy11g019330 vs. TAIR 10
Match: AT5G17680.1 (disease resistance protein (TIR-NBS-LRR class), putative )

HSP 1 Score: 74.3 bits (181), Expect = 4.9e-14
Identity = 42/75 (56.00%), Postives = 50/75 (66.67%), Query Frame = 0


Query: 6  SSSSFSSSGKWKYDVFFSFRGEDTCGGFTDHLYKALVRKGIFTFRDEDEIKEGKDISSNL 65
          SSSS SSS  WK DVF SFRGED    F  HL+    R GI  FRD+ +++ GK IS  L
Sbjct: 6  SSSSSSSSTVWKTDVFVSFRGEDVRKTFVSHLFCEFDRMGIKAFRDDLDLQRGKSISPEL 65

Query: 66 LAAIEASRFALVVVS 81
          + AI+ SRFA+VVVS
Sbjct: 66 IDAIKGSRFAIVVVS 80

The following BLAST results are available for this feature:

BLAST of Lcy11g019330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0A290U7C4	1.8e-13	57.53	Disease resistance protein Roq1 OS=Nicotiana benthamiana OX=4100 GN=ROQ1 PE=1 SV...	[more]
Q40392	1.8e-13	54.79	TMV resistance protein N OS=Nicotiana glutinosa OX=35889 GN=N PE=1 SV=1	[more]
V9M2S5	1.5e-12	57.14	Disease resistance protein RPV1 OS=Vitis rotundifolia OX=103349 GN=RPV1 PE=1 SV=...	[more]
V9M398	1.5e-12	57.14	Disease resistance protein RUN1 OS=Vitis rotundifolia OX=103349 GN=RUN1 PE=1 SV=...	[more]
Q9SSN3	9.9e-12	54.29	Toll/interleukin-1 receptor-like protein OS=Arabidopsis thaliana OX=3702 GN=TIR ...	[more]

BLAST of Lcy11g019330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ECB1	3.3e-26	82.50	TMV resistance protein N-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A1S3CBN9	2.8e-25	80.00	TMV resistance protein N-like OS=Cucumis melo OX=3656 GN=LOC103498654 PE=4 SV=1	[more]
Q5DMV0	2.8e-25	80.00	MRGH14 (Fragment) OS=Cucumis melo OX=3656 GN=MRGH14 PE=4 SV=1	[more]
A0A6J1EI44	1.4e-24	83.78	TMV resistance protein N-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
M4R4K0	6.9e-24	81.33	Resistance gene-like protein OS=Cucumis melo OX=3656 GN=RGH14 PE=4 SV=1	[more]

BLAST of Lcy11g019330 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6592341.1	1.4e-26	82.50	Disease resistance protein RUN1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022925484.1	6.8e-26	82.50	TMV resistance protein N-like isoform X1 [Cucurbita moschata]	[more]
XP_008459550.1	5.8e-25	80.00	PREDICTED: TMV resistance protein N-like [Cucumis melo]	[more]
AAU04776.1	5.8e-25	80.00	MRGH14, partial [Cucumis melo]	[more]
XP_022925485.1	2.9e-24	83.78	TMV resistance protein N-like isoform X2 [Cucurbita moschata]	[more]

BLAST of Lcy11g019330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G72890.1	2.9e-14	55.84	Disease resistance protein (TIR-NBS class)	[more]
AT1G72890.2	2.9e-14	55.84	Disease resistance protein (TIR-NBS class)	[more]
AT1G17615.1	3.7e-14	53.33	Disease resistance protein (TIR-NBS class)	[more]
AT5G48770.1	3.7e-14	54.67	Disease resistance protein (TIR-NBS-LRR class) family	[more]
AT5G17680.1	4.9e-14	56.00	disease resistance protein (TIR-NBS-LRR class), putative	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	PFAM	PF01582	TIR	coord: 17..80 e-value: 2.7E-16 score: 59.9
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	PROSITE	PS50104	TIR	coord: 16..80 score: 21.855793
IPR035897	Toll/interleukin-1 receptor homology (TIR) domain superfamily	GENE3D	3.40.50.10140		coord: 10..80 e-value: 3.8E-25 score: 90.5
IPR035897	Toll/interleukin-1 receptor homology (TIR) domain superfamily	SUPERFAMILY	52200	Toll/Interleukin receptor TIR domain	coord: 8..80
None	No IPR available	PANTHER	PTHR32009	TMV RESISTANCE PROTEIN N-LIKE	coord: 5..80
None	No IPR available	PANTHER	PTHR32009:SF60	TOLL/INTERLEUKIN-1 RECEPTOR-LIKE PROTEIN	coord: 5..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g019330.1	Lcy11g019330.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response
biological_process	GO:0007165	signal transduction
molecular_function	GO:0043531	ADP binding
molecular_function	GO:0003953	NAD+ nucleosidase activity