Lcy11g018930 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g018930
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	E3 ubiquitin-protein ligase RNF34
Location	Chr11: 45836675 .. 45840379 (-)
RNA-Seq Expression	Lcy11g018930
Synteny	Lcy11g018930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTTTTTTTCTCCTTCAGCCGTCTCTCTCTCTCTCTCTTGCTCCCAACCCGTCCATTCACCATCTCTTTCCTTGCGGTCCTCTACTCCCCTGCTCGTGGTGTCGTCGACGAGTCTCCGACAGCAGCTCCAGTCGCGCCGTCACTATCGCCGTGCAGTTCGCCGCCGCACCTGCTCAGTCGCTCGTCAGTTTCAGTTGCGTTTCAGCCATTGCCGTCGTCGTCTGGTGCCGCCGGCGCCGGTTGTGGAGTTGCAGCAGTGTTAATCCCGATTGTGGTTTCACTTGGGTAAGTTTCGGTAATAATTTCGTACTCGGTTGAAGTTGTAGTGAGATTTATGGAGATTTAAGTTAACCCACGACATTTACACCTTAGTTTCAGTCATACCCACTCTTTTCCAGCGTTTAAACTCGAATAATCGACCATTTAAGTCGCTGTCCAGCGTATAAATTTCTAGTTGAGTGAGTCTTATTATCCGTTTGAGTTCCATTTGAGATTTCATGTTTACCGGAGTTGACCCATTATCAATTGGACCCATCTTAATGCTCCCCACCCAATTTCAGCTCATTATTCGCAGATTTTCGCTACTTTGAGGTACTGTCCGGCGTTTAAGTGGCTTCAAGTGGGTTTTTGTGGGTAAGAGTTACTCCAAAGTTTCCCAATTTTGTAGGTTAAGAAATTTGAGTTTAATTTCTAAGAATTGGAATTTTAGGTGAAGTTGTGTTTGATTTTGGCTAAAGTTAAAGAGGAGATTCGAAGGAAGGATTTGTTTGGACAATGTCTCATCTTTGTTGGGTAAGTTGAGCTATTGAGCTTACCTTCAAATTTCCAAACTTAAGTATTGACTAACAATGATTGTTGTAGGTTGGCAAAAAGAGCCTTGTTGAGAAGTTGGGCTAATTAGTTTCTTTGGTTGCAAAGTCAAGTCAATGGCTTTACTGTTGAAGTTTTCAATTGGGAGTGTTTGATTTTTCCAAATTTTCACGTGTTTCATGAGTTATGAAATTATTTACTTATGCAATTTGTTATGAATGTCTACAAATGTTGAGCTTTGAAATTTTCTGAGTTGGTATTCTCTCGAAAATGTTGTAATATGTATGAGTTTAAATGACATTTGAGAGTCTTAGATTTTGAAAGGGTACATGAAATTGATGTGCTTTAAGAGGTGCTTACACAAAGCTTAGGGGCATGAAATTGATGTACCTGAGTTGAGGTTCATGGAATTGATGTTTCTCTATAAGCGACACATGAAATTGACGTGTTTAGGATATGCATGAAATTGATGTATATCCTAGTAATTATGAAGTTTACAGAGGAATGATGTTAGAGCCACCAAAATATGATTGTTATTGATTTTAGAACCATGCAAAAGTGTGACTCAATCTCAATTGTAGGGTCATTTAGTGAGTATTTAAAATACTCATTCTTTTCTAAAAATGTTTTTCAGGTAAAGGCAAAGGCATATTGAGCGATTAATTGAGCTTGTTGGAATGACTATGGGAGACTAGAGAACATGTTTTCTCGTTTAAGTTTCCGCACTCAAAAGTTATTTTTGAAAACCTGTAATTGCTTTGGTTGTAATCTCTAGACTCTAGCCCTTGTATATACATATATATATCTCTGAAATTGCTTTGGATATATAGCTTTATTGGTCAAATACAGTTTGAAGACGCGAAAGATGCGGCATGCTAGCAAGGATCTTTTGTATTTGGAGCGGAAGGATTTATCCTCTTTGTCTTTAGGTATTTTTATGGTTGATTTTTCTTCGTCTTAGCCTATATTGAAGGATAGGTATTAGAACGACTATCTAATTTTTGCCTTAAATCAGAGTCCTCACTGCTAGTTTGTAAAAAGAATTCAACGTCCAAGGAGCCCTGTCGGAATGAAAAACCCATTACAGAACCAGCTCCAAAAAGCCAATGTACATACTCTTCCCTTTTGAATTATTATTATTATTTTTTTCTTTTTTTGGGTTTTAAATCTGGACACGAGCTTAGCATTTTTAGTTCATTCACATTTAGTATCCACCCATTAAATCATCGTTTCAACGGTCTTCCCTAGTTTTATGTTTGATTTTGGCTAAATTGTAATGTTTAGGAAAGGTTAGGTTAGTCAAAGAGTACAATTGTTTGACCAAGGATCCTCTTTATTCTAAAATAAGAACTGTGCTTGTGCAAGAGCTATGGATGGACATGTATGCCTGATGGCTGGTTAGGAGACACTCACTAGTTGATACCCTTTCTTGGTTTTCTCGTTGGCTGGAAATATATTCTTGTTTGAGTGCAAAAAGTGTTAGCTTTTGCTAGTTGGCAATTGATGAGATGATTTTCCAGTTGCTCGTTTAAAACTTTGTAGCAGTATTATGTAGTTTGAAGTTGCATATAGTGGTTGGAAAATTACTGGCTATATAACCTTGTAGTATTGTTATTAACTATTGCTAACTTTATAGCACTACTATGAGATGAAATGTTGAGGTTGTTTGTAGCACTCTTTCTAACTGTATAACATCATGCACTTCAGCTGGAAACTTACCTCCCCAAAATGTCATTTGAAGTTAGCAAATTTCTTTCTGAGTACTACATTTAGAACATAGAACATTGAGCATCGAATTTGAATATATTTTTGTGCTGGTTCCTTCTTAGGAGTTGCAAGCGTTGCTCACTTCCTTTTCACTTGTTGCAGTATTGGGAAGAGTCAAAGACTTCTTAGGAGTAATATTAGAAGCTAATAAAAAGTTGCAAGTGGATGCAAAGGTTTGCACATTGACCGATTATTGCCTAAATTTGAATCTAAACACAAACAGCTTTCATAGTTCTTGACCTATACATTCTTGTTCATTGTCGTAGGACAATGCTGAAAAGTATGATATTGAAGCGCTTGATGGCAATGAATCAGAAGTCATTGAAATGGTAAGTCACCCTACCTTGTAATGGTATGTGGCCGTGGATGTGGTAGCTTGGTTTTTCATCATTCACAATGTCATGATTTGATTTAAACAGGACCTGATGTTGGGTATCGCTGATCTTCATACTCCTGAAGCTGTGTCTGCTGCTGAATCTGCAATAGTTGGTAACCAGCCTGTGATTCCATTGACTTGTAGCAGTAGTAGTAGTAGTGAATCTGAGTCTGAAGAGAGTAGTGATGATAGTATTAGCAGTGACAACAATAACTATGACAAGGAAAAGAGTGACGATCAGAATACTGACAGTGGTAACAGATCGTCAGTTAAACTCAAAAGATCAAAGTCTAGAAAAATCAGTCTTAGAAGTAAAAGTAAAGGAAAAGGTAAATCAAAAAAGCGACCAAAGATTGTAGAGCTTTCTTAAGAGCCATCTTTTGATCTGATGTGTCAACATCATGGTTTGAGAGTTTAGTTCGCCATCTGTGTCATTGAGTATATGAAGTTTCCGAAGCTTTCACTGACAGAATCTCCAAGGTTGATTGCTAGCCTAGTCCTTTAAGCTTGGGTAGGAAGCGATTTTGCTTGACCTTGTGATGATTTCAAGTTATTTCTTTCTTCACCTTTATCATGAGTTCAAGTGCTTTTGCTTGTGAAAGGGAAGGCGCTGTCTTTATTCATTTCTATTTAGGAACTGGAATATAAGTAAGTTGGAATTATTCTTGGTCATTTTGCCAATGTTGGTTTGTATACTTAATGTCAAACTTCGATATTTCAAAAATAGCCAAATTCAGACATTTCTGTTCTA

mRNA sequence

CATTTTTTTTCTCCTTCAGCCGTCTCTCTCTCTCTCTCTTGCTCCCAACCCGTCCATTCACCATCTCTTTCCTTGCGGTCCTCTACTCCCCTGCTCGTGGTGTCGTCGACGAGTCTCCGACAGCAGCTCCAGTCGCGCCGTCACTATCGCCGTGCAGTTCGCCGCCGCACCTGCTCAGTCGCTCGTCAGTTTCAGTTGCGTTTCAGCCATTGCCGTCGTCGTCTGGTGCCGCCGGCGCCGGTTGTGGAGTTGCAGCAGTGTTAATCCCGATTGTGGTTTCACTTGGCTCATTATTCGCAGATTTTCGCTACTTTGAGGTACTGTCCGGCGTTTAAGTGGCTTCAAGTGGGTTTTTGTGGGTGAAGTTGTGTTTGATTTTGGCTAAAGTTAAAGAGGAGATTCGAAGGAAGGATTTGTTTGGACAATGTCTCATCTTTGTTGGGTAAAGGCAAAGGCATATTGAGCGATTAATTGAGCTTGTTGGAATGACTATGGGAGACTAGAGAACATGTTTTCTCGTTTAAGTTTCCGCACTCAAAAGTTATTTTTGAAAACCTGTAATTGCTTTGGTTGTAATCTCTAGACTCTAGCCCTTGTATATACATATATATATCTCTGAAATTGCTTTGGATATATAGCTTTATTGGTCAAATACAGTTTGAAGACGCGAAAGATGCGGCATGCTAGCAAGGATCTTTTGTATTTGGAGCGGAAGGATTTATCCTCTTTGTCTTTAGAGTCCTCACTGCTAGTTTGTAAAAAGAATTCAACGTCCAAGGAGCCCTGTCGGAATGAAAAACCCATTACAGAACCAGCTCCAAAAAGCCAATTATTGGGAAGAGTCAAAGACTTCTTAGGAGTAATATTAGAAGCTAATAAAAAGTTGCAAGTGGATGCAAAGGACAATGCTGAAAAGTATGATATTGAAGCGCTTGATGGCAATGAATCAGAAGTCATTGAAATGGACCTGATGTTGGGTATCGCTGATCTTCATACTCCTGAAGCTGTGTCTGCTGCTGAATCTGCAATAGTTGGTAACCAGCCTGTGATTCCATTGACTTGTAGCAGTAGTAGTAGTAGTGAATCTGAGTCTGAAGAGAGTAGTGATGATAGTATTAGCAGTGACAACAATAACTATGACAAGGAAAAGAGTGACGATCAGAATACTGACAGTGGTAACAGATCGTCAGTTAAACTCAAAAGATCAAAGTCTAGAAAAATCAGTCTTAGAAGTAAAAGTAAAGGAAAAGGTAAATCAAAAAAGCGACCAAAGATTGTAGAGCTTTCTTAAGAGCCATCTTTTGATCTGATGTGTCAACATCATGGTTTGAGAGTTTAGTTCGCCATCTGTGTCATTGAGTATATGAAGTTTCCGAAGCTTTCACTGACAGAATCTCCAAGGTTGATTGCTAGCCTAGTCCTTTAAGCTTGGGTAGGAAGCGATTTTGCTTGACCTTGTGATGATTTCAAGTTATTTCTTTCTTCACCTTTATCATGAGTTCAAGTGCTTTTGCTTGTGAAAGGGAAGGCGCTGTCTTTATTCATTTCTATTTAGGAACTGGAATATAAGTAAGTTGGAATTATTCTTGGTCATTTTGCCAATGTTGGTTTGTATACTTAATGTCAAACTTCGATATTTCAAAAATAGCCAAATTCAGACATTTCTGTTCTA

Coding sequence (CDS)

ATGCGGCATGCTAGCAAGGATCTTTTGTATTTGGAGCGGAAGGATTTATCCTCTTTGTCTTTAGAGTCCTCACTGCTAGTTTGTAAAAAGAATTCAACGTCCAAGGAGCCCTGTCGGAATGAAAAACCCATTACAGAACCAGCTCCAAAAAGCCAATTATTGGGAAGAGTCAAAGACTTCTTAGGAGTAATATTAGAAGCTAATAAAAAGTTGCAAGTGGATGCAAAGGACAATGCTGAAAAGTATGATATTGAAGCGCTTGATGGCAATGAATCAGAAGTCATTGAAATGGACCTGATGTTGGGTATCGCTGATCTTCATACTCCTGAAGCTGTGTCTGCTGCTGAATCTGCAATAGTTGGTAACCAGCCTGTGATTCCATTGACTTGTAGCAGTAGTAGTAGTAGTGAATCTGAGTCTGAAGAGAGTAGTGATGATAGTATTAGCAGTGACAACAATAACTATGACAAGGAAAAGAGTGACGATCAGAATACTGACAGTGGTAACAGATCGTCAGTTAAACTCAAAAGATCAAAGTCTAGAAAAATCAGTCTTAGAAGTAAAAGTAAAGGAAAAGGTAAATCAAAAAAGCGACCAAAGATTGTAGAGCTTTCTTAA

Protein sequence

MRHASKDLLYLERKDLSSLSLESSLLVCKKNSTSKEPCRNEKPITEPAPKSQLLGRVKDFLGVILEANKKLQVDAKDNAEKYDIEALDGNESEVIEMDLMLGIADLHTPEAVSAAESAIVGNQPVIPLTCSSSSSSESESEESSDDSISSDNNNYDKEKSDDQNTDSGNRSSVKLKRSKSRKISLRSKSKGKGKSKKRPKIVELS

Homology

[Close]

BLAST of Lcy11g018930 vs. ExPASy TrEMBL
Match: A0A6J1KZJ8 (uncharacterized protein LOC111498503 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498503 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 5.0e-79
Identity = 176/206 (85.44%), Postives = 191/206 (92.72%), Query Frame = 0


Query: 1   MRHASKDLLYLERKDLSSLSLESSLLVCKKNSTSKEPCRNEKPITEPAPKSQLLGRVKDF 60
           MRHASKDLL LERKDL S SLESSLLVCKKNSTSKEPCRNEKPITEPAPKSQ+LGRVKDF
Sbjct: 1   MRHASKDLLCLERKDLPSSSLESSLLVCKKNSTSKEPCRNEKPITEPAPKSQVLGRVKDF 60

Query: 61  LGVILEANKKLQVDAKDNAEKYDIEALDGNESEVIEMDLMLGIADLHTPEAVSAAESAIV 120
           LGV+ EANKKLQ+DAKD+AEKYDIEAL+GNESEVIE+DLMLGIADLHTPEAV+AAESAI+
Sbjct: 61  LGVLSEANKKLQLDAKDDAEKYDIEALNGNESEVIELDLMLGIADLHTPEAVAAAESAII 120

Query: 121 GNQPVIPLTC-SSSSSSESESEESSDDSISSDNNNYDKEKSDDQNTDSGNRSSVKLKRSK 180
           GNQPVIPL C SSSSSSESESEESSDDSI+SDNN+ D EKSD QNTD GNR SVKLKRSK
Sbjct: 121 GNQPVIPLNCSSSSSSSESESEESSDDSITSDNNDNDNEKSDTQNTDRGNRLSVKLKRSK 180

Query: 181 SRKISLRSKSKGKGKSKKRPKIVELS 206
           SR+ + RS+S+ KGKS KRPKI+ELS
Sbjct: 181 SRRANCRSESREKGKSNKRPKILELS 206

[Close]

BLAST of Lcy11g018930 vs. ExPASy TrEMBL
Match: A0A6J1F913 (uncharacterized protein LOC111443185 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443185 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 4.3e-78
Identity = 173/205 (84.39%), Postives = 188/205 (91.71%), Query Frame = 0


Query: 1   MRHASKDLLYLERKDLSSLSLESSLLVCKKNSTSKEPCRNEKPITEPAPKSQLLGRVKDF 60
           MRHASKDLL LERKDL S S ESSLLVCKKNSTSKEPCRNEKPITEPAPKSQ+LGRVKDF
Sbjct: 1   MRHASKDLLCLERKDLPSSSFESSLLVCKKNSTSKEPCRNEKPITEPAPKSQVLGRVKDF 60

Query: 61  LGVILEANKKLQVDAKDNAEKYDIEALDGNESEVIEMDLMLGIADLHTPEAVSAAESAIV 120
           LGV+ EANKKLQ+DAKD+AEKYDIEAL+G+ESEVIE+DLMLGIADLHTPEAV+AAESAI+
Sbjct: 61  LGVLSEANKKLQLDAKDDAEKYDIEALNGDESEVIELDLMLGIADLHTPEAVAAAESAII 120

Query: 121 GNQPVIPLTCSSSSSSESESEESSDDSISSDNNNYDKEKSDDQNTDSGNRSSVKLKRSKS 180
           GNQPVI L CSSSSS ESESEESSDDSI+SDNN+ D EKSD+QNTD GNR SVKLKR KS
Sbjct: 121 GNQPVIALNCSSSSSGESESEESSDDSITSDNNDDDNEKSDNQNTDRGNRLSVKLKRLKS 180

Query: 181 RKISLRSKSKGKGKSKKRPKIVELS 206
           RK + RS+SK KGKS KRPKI+ELS
Sbjct: 181 RKTNCRSESKEKGKSNKRPKILELS 205

[Close]

BLAST of Lcy11g018930 vs. ExPASy TrEMBL
Match: A0A5D3CJH5 (E3 ubiquitin-protein ligase RNF34 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00670 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 4.7e-77
Identity = 172/205 (83.90%), Postives = 187/205 (91.22%), Query Frame = 0


Query: 1   MRHASKDLLYLERKDLSSLSLESSLLVCKKNSTSKEPCRNEKPITEPAPKSQLLGRVKDF 60
           MRHASKDLL+LERKDLS+ SLESSLLVCKKNSTSKEPCRNEKPITEPA KS +LGRV+DF
Sbjct: 1   MRHASKDLLHLERKDLSTSSLESSLLVCKKNSTSKEPCRNEKPITEPASKSLVLGRVQDF 60

Query: 61  LGVILEANKKLQVDAKDNAEKYDIEALDGNESEVIEMDLMLGIADLHTPEAVSAAESAIV 120
           LGVI EANKKLQ+D+K+NA+KYDIEALDGNESEVI++DLMLGIADLHTPEAV+AAESAI+
Sbjct: 61  LGVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLMLGIADLHTPEAVAAAESAII 120

Query: 121 GNQPVIPLTCSSSSSSESESEESSDDSISSDNNNYDKEKSDDQNTDSGNRSSVKLKRSKS 180
           GN PVIPLTC   SSSESESEESSDDSI+SD++N D EKSDDQNTD  NR SVKLKRS S
Sbjct: 121 GNHPVIPLTC---SSSESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLSVKLKRSNS 180

Query: 181 RKISLRSKSKGKGKSKKRPKIVELS 206
           RK S RSKSKGKGKSKKRPKI  LS
Sbjct: 181 RKASCRSKSKGKGKSKKRPKIQVLS 202

[Close]

BLAST of Lcy11g018930 vs. ExPASy TrEMBL
Match: A0A1S3BJW4 (uncharacterized protein LOC103490838 OS=Cucumis melo OX=3656 GN=LOC103490838 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 4.7e-77
Identity = 172/205 (83.90%), Postives = 187/205 (91.22%), Query Frame = 0


Query: 1   MRHASKDLLYLERKDLSSLSLESSLLVCKKNSTSKEPCRNEKPITEPAPKSQLLGRVKDF 60
           MRHASKDLL+LERKDLS+ SLESSLLVCKKNSTSKEPCRNEKPITEPA KS +LGRV+DF
Sbjct: 1   MRHASKDLLHLERKDLSTSSLESSLLVCKKNSTSKEPCRNEKPITEPASKSLVLGRVQDF 60

Query: 61  LGVILEANKKLQVDAKDNAEKYDIEALDGNESEVIEMDLMLGIADLHTPEAVSAAESAIV 120
           LGVI EANKKLQ+D+K+NA+KYDIEALDGNESEVI++DLMLGIADLHTPEAV+AAESAI+
Sbjct: 61  LGVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLMLGIADLHTPEAVAAAESAII 120

Query: 121 GNQPVIPLTCSSSSSSESESEESSDDSISSDNNNYDKEKSDDQNTDSGNRSSVKLKRSKS 180
           GN PVIPLTC   SSSESESEESSDDSI+SD++N D EKSDDQNTD  NR SVKLKRS S
Sbjct: 121 GNHPVIPLTC---SSSESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLSVKLKRSNS 180

Query: 181 RKISLRSKSKGKGKSKKRPKIVELS 206
           RK S RSKSKGKGKSKKRPKI  LS
Sbjct: 181 RKASCRSKSKGKGKSKKRPKIQVLS 202

[Close]

BLAST of Lcy11g018930 vs. ExPASy TrEMBL
Match: A0A0A0L448 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017130 PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 6.8e-76
Identity = 172/205 (83.90%), Postives = 184/205 (89.76%), Query Frame = 0


Query: 1   MRHASKDLLYLERKDLSSLSLESSLLVCKKNSTSKEPCRNEKPITEPAPKSQLLGRVKDF 60
           MRH SKDLLYLERKDLSS SLESSLLVCKKNSTSK+P RNEKPITEPA KS +LGRVKDF
Sbjct: 1   MRHPSKDLLYLERKDLSSSSLESSLLVCKKNSTSKDPTRNEKPITEPASKSLVLGRVKDF 60

Query: 61  LGVILEANKKLQVDAKDNAEKYDIEALDGNESEVIEMDLMLGIADLHTPEAVSAAESAIV 120
           LGVI EANKKLQ+D+K+NAEKYDIEALDGNESEVI++DLMLGIADLHTPEAV+AAESAI+
Sbjct: 61  LGVISEANKKLQMDSKENAEKYDIEALDGNESEVIQLDLMLGIADLHTPEAVTAAESAII 120

Query: 121 GNQPVIPLTCSSSSSSESESEESSDDSISSDNNNYDKEKSDDQNTDSGNRSSVKLKRSKS 180
           GN PVIPLTC   SSSESESEESSDDSI+SD++N D EKSDDQ TD  NR SVKLKRS S
Sbjct: 121 GNHPVIPLTC---SSSESESEESSDDSITSDHDNDDNEKSDDQKTDCSNRLSVKLKRSNS 180

Query: 181 RKISLRSKSKGKGKSKKRPKIVELS 206
           RK S RSKSKGKGKSKKRPKI  LS
Sbjct: 181 RKTSCRSKSKGKGKSKKRPKIQVLS 202

[Close]

BLAST of Lcy11g018930 vs. NCBI nr
Match: XP_023005549.1 (uncharacterized protein LOC111498503 isoform X1 [Cucurbita maxima])

HSP 1 Score: 303.9 bits (777), Expect = 1.0e-78
Identity = 176/206 (85.44%), Postives = 191/206 (92.72%), Query Frame = 0


Query: 1   MRHASKDLLYLERKDLSSLSLESSLLVCKKNSTSKEPCRNEKPITEPAPKSQLLGRVKDF 60
           MRHASKDLL LERKDL S SLESSLLVCKKNSTSKEPCRNEKPITEPAPKSQ+LGRVKDF
Sbjct: 1   MRHASKDLLCLERKDLPSSSLESSLLVCKKNSTSKEPCRNEKPITEPAPKSQVLGRVKDF 60

Query: 61  LGVILEANKKLQVDAKDNAEKYDIEALDGNESEVIEMDLMLGIADLHTPEAVSAAESAIV 120
           LGV+ EANKKLQ+DAKD+AEKYDIEAL+GNESEVIE+DLMLGIADLHTPEAV+AAESAI+
Sbjct: 61  LGVLSEANKKLQLDAKDDAEKYDIEALNGNESEVIELDLMLGIADLHTPEAVAAAESAII 120

Query: 121 GNQPVIPLTC-SSSSSSESESEESSDDSISSDNNNYDKEKSDDQNTDSGNRSSVKLKRSK 180
           GNQPVIPL C SSSSSSESESEESSDDSI+SDNN+ D EKSD QNTD GNR SVKLKRSK
Sbjct: 121 GNQPVIPLNCSSSSSSSESESEESSDDSITSDNNDNDNEKSDTQNTDRGNRLSVKLKRSK 180

Query: 181 SRKISLRSKSKGKGKSKKRPKIVELS 206
           SR+ + RS+S+ KGKS KRPKI+ELS
Sbjct: 181 SRRANCRSESREKGKSNKRPKILELS 206

[Close]

BLAST of Lcy11g018930 vs. NCBI nr
Match: XP_023539679.1 (uncharacterized protein LOC111800292 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 302.0 bits (772), Expect = 4.0e-78
Identity = 175/206 (84.95%), Postives = 193/206 (93.69%), Query Frame = 0


Query: 1   MRHASKDLLYLERKDLSSLSLESSLLVCKKNSTSKEPCRNEKPITEPAPKSQLLGRVKDF 60
           MRHASKDLL LERKDL S SLESSLLVCKKNSTSKEPCRNEKPITEPAPKSQ+LGRVKDF
Sbjct: 1   MRHASKDLLCLERKDLPSSSLESSLLVCKKNSTSKEPCRNEKPITEPAPKSQVLGRVKDF 60

Query: 61  LGVILEANKKLQVDAKDNAEKYDIEALDGNESEVIEMDLMLGIADLHTPEAVSAAESAIV 120
           LGV+ EANKKLQ+DAKD+AEKYDIEAL+G+ESEVIE+DLMLGIADLHTPEAV+AAESAI+
Sbjct: 61  LGVLSEANKKLQLDAKDDAEKYDIEALNGDESEVIELDLMLGIADLHTPEAVAAAESAII 120

Query: 121 GNQPVIPLTCS-SSSSSESESEESSDDSISSDNNNYDKEKSDDQNTDSGNRSSVKLKRSK 180
           GNQPVIPL CS SSSSSESESEE+SDDSI+SDNN+ D EKSD++NTD GNR SVKLKRSK
Sbjct: 121 GNQPVIPLNCSRSSSSSESESEENSDDSITSDNNDDDNEKSDNKNTDRGNRLSVKLKRSK 180

Query: 181 SRKISLRSKSKGKGKSKKRPKIVELS 206
           SRK + RS+SK KGKSKKRP+I+ELS
Sbjct: 181 SRKTNNRSESKEKGKSKKRPRILELS 206

[Close]

BLAST of Lcy11g018930 vs. NCBI nr
Match: XP_022936657.1 (uncharacterized protein LOC111443185 isoform X1 [Cucurbita moschata])

HSP 1 Score: 300.8 bits (769), Expect = 8.8e-78
Identity = 173/205 (84.39%), Postives = 188/205 (91.71%), Query Frame = 0


Query: 1   MRHASKDLLYLERKDLSSLSLESSLLVCKKNSTSKEPCRNEKPITEPAPKSQLLGRVKDF 60
           MRHASKDLL LERKDL S S ESSLLVCKKNSTSKEPCRNEKPITEPAPKSQ+LGRVKDF
Sbjct: 1   MRHASKDLLCLERKDLPSSSFESSLLVCKKNSTSKEPCRNEKPITEPAPKSQVLGRVKDF 60

Query: 61  LGVILEANKKLQVDAKDNAEKYDIEALDGNESEVIEMDLMLGIADLHTPEAVSAAESAIV 120
           LGV+ EANKKLQ+DAKD+AEKYDIEAL+G+ESEVIE+DLMLGIADLHTPEAV+AAESAI+
Sbjct: 61  LGVLSEANKKLQLDAKDDAEKYDIEALNGDESEVIELDLMLGIADLHTPEAVAAAESAII 120

Query: 121 GNQPVIPLTCSSSSSSESESEESSDDSISSDNNNYDKEKSDDQNTDSGNRSSVKLKRSKS 180
           GNQPVI L CSSSSS ESESEESSDDSI+SDNN+ D EKSD+QNTD GNR SVKLKR KS
Sbjct: 121 GNQPVIALNCSSSSSGESESEESSDDSITSDNNDDDNEKSDNQNTDRGNRLSVKLKRLKS 180

Query: 181 RKISLRSKSKGKGKSKKRPKIVELS 206
           RK + RS+SK KGKS KRPKI+ELS
Sbjct: 181 RKTNCRSESKEKGKSNKRPKILELS 205

[Close]

BLAST of Lcy11g018930 vs. NCBI nr
Match: XP_038903017.1 (uncharacterized protein LOC120089721 [Benincasa hispida] >XP_038903019.1 uncharacterized protein LOC120089721 [Benincasa hispida])

HSP 1 Score: 300.1 bits (767), Expect = 1.5e-77
Identity = 178/205 (86.83%), Postives = 189/205 (92.20%), Query Frame = 0


Query: 1   MRHASKDLLYLERKDLSSLSLESSLLVCKKNSTSKEPCRNEKPITEPAPKSQLLGRVKDF 60
           MRH SKDLLYLERKDLSS SLESSLLVCKKNSTSKEP RNEKPITEPA KS +LGRVKDF
Sbjct: 1   MRH-SKDLLYLERKDLSSSSLESSLLVCKKNSTSKEPRRNEKPITEPASKSLVLGRVKDF 60

Query: 61  LGVILEANKKLQVDAKDNAEKYDIEALDGNESEVIEMDLMLGIADLHTPEAVSAAESAIV 120
           LGVI EANKKLQ+DAKDNAEKYDIEALDGNES+VIE+DLMLGIADLHTPEAV+AAESAI+
Sbjct: 61  LGVISEANKKLQMDAKDNAEKYDIEALDGNESKVIELDLMLGIADLHTPEAVAAAESAII 120

Query: 121 GNQPVIPLTCSSSSSSESESEESSDDSISSDNNNYDKEKSDDQNTDSGNRSSVKLKRSKS 180
           GNQPVIPLTC  SSSSESESEESSDDSI+S++NN D EKSDDQNTD  NRSSVKLKRS S
Sbjct: 121 GNQPVIPLTC--SSSSESESEESSDDSITSNDNNDDNEKSDDQNTDHSNRSSVKLKRSNS 180

Query: 181 RKISLRSKSKGKGKSKKRPKIVELS 206
           RK S RSKSKGK KS+KRPKI+ELS
Sbjct: 181 RKTSCRSKSKGKSKSEKRPKILELS 202

[Close]

BLAST of Lcy11g018930 vs. NCBI nr
Match: XP_008448773.1 (PREDICTED: uncharacterized protein LOC103490838 [Cucumis melo] >KAA0041045.1 E3 ubiquitin-protein ligase RNF34 [Cucumis melo var. makuwa] >TYK12053.1 E3 ubiquitin-protein ligase RNF34 [Cucumis melo var. makuwa])

HSP 1 Score: 297.4 bits (760), Expect = 9.8e-77
Identity = 172/205 (83.90%), Postives = 187/205 (91.22%), Query Frame = 0


Query: 1   MRHASKDLLYLERKDLSSLSLESSLLVCKKNSTSKEPCRNEKPITEPAPKSQLLGRVKDF 60
           MRHASKDLL+LERKDLS+ SLESSLLVCKKNSTSKEPCRNEKPITEPA KS +LGRV+DF
Sbjct: 1   MRHASKDLLHLERKDLSTSSLESSLLVCKKNSTSKEPCRNEKPITEPASKSLVLGRVQDF 60

Query: 61  LGVILEANKKLQVDAKDNAEKYDIEALDGNESEVIEMDLMLGIADLHTPEAVSAAESAIV 120
           LGVI EANKKLQ+D+K+NA+KYDIEALDGNESEVI++DLMLGIADLHTPEAV+AAESAI+
Sbjct: 61  LGVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLMLGIADLHTPEAVAAAESAII 120

Query: 121 GNQPVIPLTCSSSSSSESESEESSDDSISSDNNNYDKEKSDDQNTDSGNRSSVKLKRSKS 180
           GN PVIPLTC   SSSESESEESSDDSI+SD++N D EKSDDQNTD  NR SVKLKRS S
Sbjct: 121 GNHPVIPLTC---SSSESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLSVKLKRSNS 180

Query: 181 RKISLRSKSKGKGKSKKRPKIVELS 206
           RK S RSKSKGKGKSKKRPKI  LS
Sbjct: 181 RKASCRSKSKGKGKSKKRPKIQVLS 202

[Close]

BLAST of Lcy11g018930 vs. TAIR 10
Match: AT1G71430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 64 Blast hits to 64 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 14; Fungi - 6; Plants - 42; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 114.8 bits (286), Expect = 8.4e-26
Identity = 81/150 (54.00%), Postives = 102/150 (68.00%), Query Frame = 0


Query: 6   KDLLYLERKDLSSLS-LESSLLVC---KKNSTSKEPCRNEKPITEPAPKSQLLGRVKDFL 65
           KDLL LE K+ SS S ++S+LL+C    K     E     KP   P PKSQLLG++K FL
Sbjct: 8   KDLLKLELKNPSSSSAMDSALLMCTDKNKKKKKMEAPPPSKPTIAPVPKSQLLGKLKGFL 67

Query: 66  GVILEANKKLQVDAKDNAEKYDIEALDGNESEVIEMDLMLGIADLHTPEAVSAAESAIVG 125
           GV+ EANKK    ++ N E Y+IEAL GNESE+IEMDLMLG+ADL+TPEAVSAAE+AI G
Sbjct: 68  GVMAEANKK----SEANPEAYNIEALTGNESELIEMDLMLGVADLNTPEAVSAAEAAIAG 127

Query: 126 NQPVIPLTCSSSSSSESESEESSDDSISSD 152
             P    +  SSS  ES+SE   ++S S++
Sbjct: 128 IGPAAE-SGDSSSDDESDSESEGEESKSAE 152

The following BLAST results are available for this feature:

BLAST of Lcy11g018930 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy11g018930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KZJ8	5.0e-79	85.44	uncharacterized protein LOC111498503 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1F913	4.3e-78	84.39	uncharacterized protein LOC111443185 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A5D3CJH5	4.7e-77	83.90	E3 ubiquitin-protein ligase RNF34 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3BJW4	4.7e-77	83.90	uncharacterized protein LOC103490838 OS=Cucumis melo OX=3656 GN=LOC103490838 PE=...	[more]
A0A0A0L448	6.8e-76	83.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017130 PE=4 SV=1	[more]

BLAST of Lcy11g018930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023005549.1	1.0e-78	85.44	uncharacterized protein LOC111498503 isoform X1 [Cucurbita maxima]	[more]
XP_023539679.1	4.0e-78	84.95	uncharacterized protein LOC111800292 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022936657.1	8.8e-78	84.39	uncharacterized protein LOC111443185 isoform X1 [Cucurbita moschata]	[more]
XP_038903017.1	1.5e-77	86.83	uncharacterized protein LOC120089721 [Benincasa hispida] >XP_038903019.1 unchara...	[more]
XP_008448773.1	9.8e-77	83.90	PREDICTED: uncharacterized protein LOC103490838 [Cucumis melo] >KAA0041045.1 E3 ...	[more]

BLAST of Lcy11g018930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G71430.1	8.4e-26	54.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027921	NOP protein chaperone 1	PFAM	PF15370	DUF4598	coord: 53..204 e-value: 5.7E-16 score: 59.0
IPR027921	NOP protein chaperone 1	PANTHER	PTHR28674	SIMILAR TO DNA SEGMENT, CHR 10, WAYNE STATE UNIVERSITY 102,-EXPRESSED	coord: 2..205
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 174..197
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..205
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 151..165

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g018930.1	Lcy11g018930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000492	box C/D snoRNP assembly
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0062064	box C/D snoRNP complex binding