Lcy11g018880 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g018880
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Protein lingerer like
Location	Chr11: 45737589 .. 45738830 (+)
RNA-Seq Expression	Lcy11g018880
Synteny	Lcy11g018880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGTGTGGTGCTATTTGTGAATTTTAGGCAAAGGTCTCGAAAGAGAATAAAGTGTTGGTGACTGTGTATTCAGAGAAGCAAGAACCAAGACTAGCAGTGAATCGTTACCAACGTGATGATGTGAACAAAACAGTGAGAAATCAATGGAAGCAAGATATAGCTAATAAAGGATACAATAGGAGAACTGAGCTCCTCAAGTACTCTCAACGGCTTCGAAAGTCTGCACGGTCACCTGCATCTCCATATATCCGAACTCCAGAGCCGATTTCTTTAAAGAACAAGCAACCGATCGCAAGAAGCATAGCGATTAATCTTGTATGCTCTTCCTTTTCTGTAAGTTTGCATATTTGATTCACAAAGCAATCACATTTATCTTCTTGTCCCAGCAAGGAAGTATCATAATCAATCTAGTGTTTTTTTAGAACTCAAGTACAGTTGTACAACCTATAGAACAGATCCTGTTCAAGTAAGGTAATATAATCAACATAGTTGTCTTCAGCAATAATCTAACCCAACTAGTTTTTTTCAGCAATAATCTAACCCACCTGGCAGGAAAGTATGATAAACTAACCCGTCTAGCGAAAAAATATGAAAATCAACCTAGTTTTTTTCAGCAATAATCTAACGCAACTATTGGCACACACCAAATTCATCTGGACAAGTCAAATTTGAATAGATATAGCAGTAATATTCGGTATAGTATCAAAGTTTTGGAGGTGTAAATGGAAGCTTCCCAAGGTCATTCTATAATAACTTTAGGCCAGACAAGATCATGACAACTTGATGTAACTATAAGTGTTGTAATATTGGAGATAACGTCAAACCCAATAATTTATATTCTGTATATGTATAAAATTTGTTGTTTTGGAAGGATATATAGCTTGACATTTATATCATCATCATGTTTGTGATGACTTAAGATTTGCCTTTCTTGATAGCTCGTCAATCTTTGTGGAAAGCCCAAGGGTTCCAGATCTACCTCTTGCTTCGGCAACCTGATTCAAAGGTCTTACAAAGCTTTGACAAGTTTGCAACCAAAGAAAGAGAGAAAAAAGCAGAACCAAAGCCGTGGATCTACCAAGAATGTTAATAATGATGTAAAAAACAGTGGATCGACAAGTAAGAGTGCTAATGATAATATAAAAAGTAGAAGAATAAGACTGTTGACATTTACATGCACTTAATTTTATAGATCTCCATGAAACTTACCTGGATGTATGCCTCAGATTCCTCACTTAA

mRNA sequence

ATGGCAAAGGTCTCGAAAGAGAATAAAGTGTTGGTGACTGTGTATTCAGAGAAGCAAGAACCAAGACTAGCAGTGAATCGTTACCAACGTGATGATGTGAACAAAACAGTGAGAAATCAATGGAAGCAAGATATAGCTAATAAAGGATACAATAGGAGAACTGAGCTCCTCAAGTACTCTCAACGGCTTCGAAAGTCTGCACGGTCACCTGCATCTCCATATATCCGAACTCCAGAGCCGATTTCTTTAAAGAACAAGCAACCGATCGCAAGAAGCATAGCGATTAATCTTGTATGCTCTTCCTTTTCTCTCGTCAATCTTTGTGGAAAGCCCAAGGGTTCCAGATCTACCTCTTGCTTCGGCAACCTGATTCAAAGGTCTTACAAAGCTTTGACAAGTTTGCAACCAAAGAAAGAGAGAAAAAAGCAGAACCAAAGCCGTGGATCTACCAAGAATGTTAATAATGATGTAAAAAACAGTGGATCGACAAATCTCCATGAAACTTACCTGGATGTATGCCTCAGATTCCTCACTTAA

Coding sequence (CDS)

ATGGCAAAGGTCTCGAAAGAGAATAAAGTGTTGGTGACTGTGTATTCAGAGAAGCAAGAACCAAGACTAGCAGTGAATCGTTACCAACGTGATGATGTGAACAAAACAGTGAGAAATCAATGGAAGCAAGATATAGCTAATAAAGGATACAATAGGAGAACTGAGCTCCTCAAGTACTCTCAACGGCTTCGAAAGTCTGCACGGTCACCTGCATCTCCATATATCCGAACTCCAGAGCCGATTTCTTTAAAGAACAAGCAACCGATCGCAAGAAGCATAGCGATTAATCTTGTATGCTCTTCCTTTTCTCTCGTCAATCTTTGTGGAAAGCCCAAGGGTTCCAGATCTACCTCTTGCTTCGGCAACCTGATTCAAAGGTCTTACAAAGCTTTGACAAGTTTGCAACCAAAGAAAGAGAGAAAAAAGCAGAACCAAAGCCGTGGATCTACCAAGAATGTTAATAATGATGTAAAAAACAGTGGATCGACAAATCTCCATGAAACTTACCTGGATGTATGCCTCAGATTCCTCACTTAA

Protein sequence

MAKVSKENKVLVTVYSEKQEPRLAVNRYQRDDVNKTVRNQWKQDIANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPISLKNKQPIARSIAINLVCSSFSLVNLCGKPKGSRSTSCFGNLIQRSYKALTSLQPKKERKKQNQSRGSTKNVNNDVKNSGSTNLHETYLDVCLRFLT

Homology

[Close]

BLAST of Lcy11g018880 vs. ExPASy TrEMBL
Match: A0A0A0L6R0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017150 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 1.1e-69
Identity = 145/162 (89.51%), Postives = 150/162 (92.59%), Query Frame = 0


Query: 1   MAKVSKENKVLVTVYSEKQEPRLAVNRYQRDDVNKTVRNQWKQDIANKGYNRRTELLKYS 60
           MA VSKENKVLVTVYSEKQEPRL VNRYQRD+VNK VRNQWKQD ANKGYNRRTELLKYS
Sbjct: 1   MATVSKENKVLVTVYSEKQEPRLPVNRYQRDNVNKVVRNQWKQDTANKGYNRRTELLKYS 60

Query: 61  QRLRKSARSPASPYIRTPEPISLKNKQPIARSIAINLVCSSFSLVNLCGKPKGSRSTSCF 120
           QRLRKSARSPASPYIRTPEPI LKNKQPIARSIAINLVC+SFSLVNLCGKPKG R TSCF
Sbjct: 61  QRLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINLVCTSFSLVNLCGKPKGPRFTSCF 120

Query: 121 GNLIQRSYKALTSLQPKKERKKQNQSRGSTKNVNNDVKNSGS 163
           GNLIQRSYKALTS QPKK+R+KQNQS GSTK V N+VKNS S
Sbjct: 121 GNLIQRSYKALTSFQPKKDRQKQNQSSGSTKKV-NEVKNSES 161

[Close]

BLAST of Lcy11g018880 vs. ExPASy TrEMBL
Match: A0A1S3BKH3 (uncharacterized protein LOC103490841 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490841 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 7.0e-69
Identity = 144/162 (88.89%), Postives = 149/162 (91.98%), Query Frame = 0


Query: 1   MAKVSKENKVLVTVYSEKQEPRLAVNRYQRDDVNKTVRNQWKQDIANKGYNRRTELLKYS 60
           MA VSKENKVLVTVYSEKQEPRL VNRYQR +VNK VRNQWKQD ANKGYNRRTELLKYS
Sbjct: 1   MATVSKENKVLVTVYSEKQEPRLPVNRYQRANVNKVVRNQWKQDTANKGYNRRTELLKYS 60

Query: 61  QRLRKSARSPASPYIRTPEPISLKNKQPIARSIAINLVCSSFSLVNLCGKPKGSRSTSCF 120
           QRLRKSARSPASPYIRTPEPI LKNKQPIARSIAINLVC+SFSLVNLCGKPKG R TSCF
Sbjct: 61  QRLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINLVCTSFSLVNLCGKPKGPRFTSCF 120

Query: 121 GNLIQRSYKALTSLQPKKERKKQNQSRGSTKNVNNDVKNSGS 163
           GNLIQRSYKAL S QPKK+R+KQNQS GSTKNV N+VKNS S
Sbjct: 121 GNLIQRSYKALASFQPKKDRQKQNQSSGSTKNV-NEVKNSES 161

[Close]

BLAST of Lcy11g018880 vs. ExPASy TrEMBL
Match: A0A1S3BL45 (uncharacterized protein LOC103490841 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490841 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 8.9e-64
Identity = 139/162 (85.80%), Postives = 143/162 (88.27%), Query Frame = 0


Query: 1   MAKVSKENKVLVTVYSEKQEPRLAVNRYQRDDVNKTVRNQWKQDIANKGYNRRTELLKYS 60
           MA VSKENKVLVTVYSEKQEPRL VNRYQR +VNK VRNQWKQD ANKGYNRRTELLKYS
Sbjct: 1   MATVSKENKVLVTVYSEKQEPRLPVNRYQRANVNKVVRNQWKQDTANKGYNRRTELLKYS 60

Query: 61  QRLRKSARSPASPYIRTPEPISLKNKQPIARSIAINLVCSSFSLVNLCGKPKGSRSTSCF 120
           QRLRKSARSPASPYIRTPEPI LKNKQPIARSIAINL      LVNLCGKPKG R TSCF
Sbjct: 61  QRLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINL------LVNLCGKPKGPRFTSCF 120

Query: 121 GNLIQRSYKALTSLQPKKERKKQNQSRGSTKNVNNDVKNSGS 163
           GNLIQRSYKAL S QPKK+R+KQNQS GSTKNV N+VKNS S
Sbjct: 121 GNLIQRSYKALASFQPKKDRQKQNQSSGSTKNV-NEVKNSES 155

[Close]

BLAST of Lcy11g018880 vs. ExPASy TrEMBL
Match: A0A5A7TG76 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00700 PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 1.5e-42
Identity = 95/103 (92.23%), Postives = 97/103 (94.17%), Query Frame = 0


Query: 2   AKVSKENKVLVTVYSEKQEPRLAVNRYQRDDVNKTVRNQWKQDIANKGYNRRTELLKYSQ 61
           A VSKENKVLVTVYSEKQEPRL VNRYQR +VNK VRNQWKQD ANKGYNRRTELLKYSQ
Sbjct: 272 ATVSKENKVLVTVYSEKQEPRLPVNRYQRANVNKVVRNQWKQDTANKGYNRRTELLKYSQ 331

Query: 62  RLRKSARSPASPYIRTPEPISLKNKQPIARSIAINLVCSSFSL 105
           RLRKSARSPASPYIRTPEPI LKNKQPIARSIAINLVC+SFSL
Sbjct: 332 RLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINLVCTSFSL 374

[Close]

BLAST of Lcy11g018880 vs. ExPASy TrEMBL
Match: A0A061GAZ6 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_015850 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.5e-10
Identity = 62/159 (38.99%), Postives = 91/159 (57.23%), Query Frame = 0


Query: 1   MAKVSKENKVLVTVYSEKQEPRLAVNRY---QRDDVNKTVRNQW-KQDIANKGYNRRTEL 60
           MA   K+  VLVTVY+EK    ++ N     Q   ++ T++ +  K   A KGYNRR EL
Sbjct: 22  MATRCKDMAVLVTVYAEKPRRSVSSNHQHHRQHHYLHHTIKQELIKHGGAGKGYNRRAEL 81

Query: 61  LKYSQRLRKSARSPASPYIRTPEPISLKNKQPIARSIAINLVCSSFSLVNLCGKPKGSRS 120
           L YSQRLR+SARS AS  +++ +P+S  ++Q            +S  +V++  KPK SR+
Sbjct: 82  LHYSQRLRESARSAASTALQS-KPVSSNDQQ------------ASNKIVSVQRKPKCSRT 141

Query: 121 TSCFGN---LIQRSYKALTSLQPKKERKKQNQSRGSTKN 153
            +CF N   LI R  ++LT+LQ KK  KK+     + +N
Sbjct: 142 PACFDNWGILIPRFLRSLTTLQAKKTGKKKQHCGSTARN 167

[Close]

BLAST of Lcy11g018880 vs. NCBI nr
Match: XP_011650374.1 (uncharacterized protein LOC105434777 isoform X1 [Cucumis sativus])

HSP 1 Score: 272.7 bits (696), Expect = 2.2e-69
Identity = 145/162 (89.51%), Postives = 150/162 (92.59%), Query Frame = 0


Query: 1   MAKVSKENKVLVTVYSEKQEPRLAVNRYQRDDVNKTVRNQWKQDIANKGYNRRTELLKYS 60
           MA VSKENKVLVTVYSEKQEPRL VNRYQRD+VNK VRNQWKQD ANKGYNRRTELLKYS
Sbjct: 1   MATVSKENKVLVTVYSEKQEPRLPVNRYQRDNVNKVVRNQWKQDTANKGYNRRTELLKYS 60

Query: 61  QRLRKSARSPASPYIRTPEPISLKNKQPIARSIAINLVCSSFSLVNLCGKPKGSRSTSCF 120
           QRLRKSARSPASPYIRTPEPI LKNKQPIARSIAINLVC+SFSLVNLCGKPKG R TSCF
Sbjct: 61  QRLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINLVCTSFSLVNLCGKPKGPRFTSCF 120

Query: 121 GNLIQRSYKALTSLQPKKERKKQNQSRGSTKNVNNDVKNSGS 163
           GNLIQRSYKALTS QPKK+R+KQNQS GSTK V N+VKNS S
Sbjct: 121 GNLIQRSYKALTSFQPKKDRQKQNQSSGSTKKV-NEVKNSES 161

[Close]

BLAST of Lcy11g018880 vs. NCBI nr
Match: XP_008448775.1 (PREDICTED: uncharacterized protein LOC103490841 isoform X1 [Cucumis melo])

HSP 1 Score: 270.0 bits (689), Expect = 1.4e-68
Identity = 144/162 (88.89%), Postives = 149/162 (91.98%), Query Frame = 0


Query: 1   MAKVSKENKVLVTVYSEKQEPRLAVNRYQRDDVNKTVRNQWKQDIANKGYNRRTELLKYS 60
           MA VSKENKVLVTVYSEKQEPRL VNRYQR +VNK VRNQWKQD ANKGYNRRTELLKYS
Sbjct: 1   MATVSKENKVLVTVYSEKQEPRLPVNRYQRANVNKVVRNQWKQDTANKGYNRRTELLKYS 60

Query: 61  QRLRKSARSPASPYIRTPEPISLKNKQPIARSIAINLVCSSFSLVNLCGKPKGSRSTSCF 120
           QRLRKSARSPASPYIRTPEPI LKNKQPIARSIAINLVC+SFSLVNLCGKPKG R TSCF
Sbjct: 61  QRLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINLVCTSFSLVNLCGKPKGPRFTSCF 120

Query: 121 GNLIQRSYKALTSLQPKKERKKQNQSRGSTKNVNNDVKNSGS 163
           GNLIQRSYKAL S QPKK+R+KQNQS GSTKNV N+VKNS S
Sbjct: 121 GNLIQRSYKALASFQPKKDRQKQNQSSGSTKNV-NEVKNSES 161

[Close]

BLAST of Lcy11g018880 vs. NCBI nr
Match: XP_011650375.1 (uncharacterized protein LOC105434777 isoform X2 [Cucumis sativus] >KAE8650041.1 hypothetical protein Csa_011805 [Cucumis sativus])

HSP 1 Score: 255.8 bits (652), Expect = 2.8e-64
Identity = 140/162 (86.42%), Postives = 144/162 (88.89%), Query Frame = 0


Query: 1   MAKVSKENKVLVTVYSEKQEPRLAVNRYQRDDVNKTVRNQWKQDIANKGYNRRTELLKYS 60
           MA VSKENKVLVTVYSEKQEPRL VNRYQRD+VNK VRNQWKQD ANKGYNRRTELLKYS
Sbjct: 1   MATVSKENKVLVTVYSEKQEPRLPVNRYQRDNVNKVVRNQWKQDTANKGYNRRTELLKYS 60

Query: 61  QRLRKSARSPASPYIRTPEPISLKNKQPIARSIAINLVCSSFSLVNLCGKPKGSRSTSCF 120
           QRLRKSARSPASPYIRTPEPI LKNKQPIARSIAINL      LVNLCGKPKG R TSCF
Sbjct: 61  QRLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINL------LVNLCGKPKGPRFTSCF 120

Query: 121 GNLIQRSYKALTSLQPKKERKKQNQSRGSTKNVNNDVKNSGS 163
           GNLIQRSYKALTS QPKK+R+KQNQS GSTK V N+VKNS S
Sbjct: 121 GNLIQRSYKALTSFQPKKDRQKQNQSSGSTKKV-NEVKNSES 155

[Close]

BLAST of Lcy11g018880 vs. NCBI nr
Match: XP_008448776.1 (PREDICTED: uncharacterized protein LOC103490841 isoform X2 [Cucumis melo])

HSP 1 Score: 253.1 bits (645), Expect = 1.8e-63
Identity = 139/162 (85.80%), Postives = 143/162 (88.27%), Query Frame = 0


Query: 1   MAKVSKENKVLVTVYSEKQEPRLAVNRYQRDDVNKTVRNQWKQDIANKGYNRRTELLKYS 60
           MA VSKENKVLVTVYSEKQEPRL VNRYQR +VNK VRNQWKQD ANKGYNRRTELLKYS
Sbjct: 1   MATVSKENKVLVTVYSEKQEPRLPVNRYQRANVNKVVRNQWKQDTANKGYNRRTELLKYS 60

Query: 61  QRLRKSARSPASPYIRTPEPISLKNKQPIARSIAINLVCSSFSLVNLCGKPKGSRSTSCF 120
           QRLRKSARSPASPYIRTPEPI LKNKQPIARSIAINL      LVNLCGKPKG R TSCF
Sbjct: 61  QRLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINL------LVNLCGKPKGPRFTSCF 120

Query: 121 GNLIQRSYKALTSLQPKKERKKQNQSRGSTKNVNNDVKNSGS 163
           GNLIQRSYKAL S QPKK+R+KQNQS GSTKNV N+VKNS S
Sbjct: 121 GNLIQRSYKALASFQPKKDRQKQNQSSGSTKNV-NEVKNSES 155

[Close]

BLAST of Lcy11g018880 vs. NCBI nr
Match: KAG7030163.1 (hypothetical protein SDJN02_08510, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 198.7 bits (504), Expect = 4.1e-47
Identity = 109/155 (70.32%), Postives = 123/155 (79.35%), Query Frame = 0


Query: 2   AKVSKENKVLVTVYSEKQEPRLAVNRYQRDDVNKTVRNQWKQDIANKGYNRRTELLKYSQ 61
           AKVS+ENKVLV+VY+E+QEPR+AVNR QRDDVNKTVRNQWK++IANKGYNRRTELLKYSQ
Sbjct: 5   AKVSRENKVLVSVYTERQEPRVAVNRVQRDDVNKTVRNQWKKEIANKGYNRRTELLKYSQ 64

Query: 62  RLRKSARSPASPYIRTPEPISLKNKQPIARSIAINLVCSSFSLVNLCGKPKGSRSTSCFG 121
           RLRKSA+SPASPY+ TPEPI                     SLVNL  KPKG+R TSCFG
Sbjct: 65  RLRKSAQSPASPYLPTPEPI---------------------SLVNLRAKPKGARFTSCFG 124

Query: 122 NLIQRSYKALTSLQPKKERKKQNQSRGSTKNVNND 157
           NLIQRS KALTS QPK +R+ QNQS GSTKN N++
Sbjct: 125 NLIQRSRKALTSFQPKNKRQNQNQSSGSTKNANDN 138

The following BLAST results are available for this feature:

BLAST of Lcy11g018880 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy11g018880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6R0	1.1e-69	89.51	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017150 PE=4 SV=1	[more]
A0A1S3BKH3	7.0e-69	88.89	uncharacterized protein LOC103490841 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3BL45	8.9e-64	85.80	uncharacterized protein LOC103490841 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5A7TG76	1.5e-42	92.23	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A061GAZ6	1.5e-10	38.99	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_015850 PE=4 SV=1	[more]

BLAST of Lcy11g018880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011650374.1	2.2e-69	89.51	uncharacterized protein LOC105434777 isoform X1 [Cucumis sativus]	[more]
XP_008448775.1	1.4e-68	88.89	PREDICTED: uncharacterized protein LOC103490841 isoform X1 [Cucumis melo]	[more]
XP_011650375.1	2.8e-64	86.42	uncharacterized protein LOC105434777 isoform X2 [Cucumis sativus] >KAE8650041.1 ...	[more]
XP_008448776.1	1.8e-63	85.80	PREDICTED: uncharacterized protein LOC103490841 isoform X2 [Cucumis melo]	[more]
KAG7030163.1	4.1e-47	70.32	hypothetical protein SDJN02_08510, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Lcy11g018880 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..161
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 147..161

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g018880.1	Lcy11g018880.1	mRNA