Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAATCTGCCTTGGCTGGTGGGAGGGGACTTCAACGAGATTCTTTTTGCTAGTGAGAAGTTGGGAGGTAATCCTAAGTAGCAAAGTGACATGGATGGGTTTAAAGAAGTGCTGAGTTTATGTGACCTTGTGGATTTAGGCTATAAAGGGGATAAATTCACATGGAAGATAAGAGACAAGAAAGGGGAGATTATAAAAGAGAGGCTAGATAGGTTTGTGGCTAATCCTAAGCTAATCGACAAAATGTTTAGAATGGAGGCATCCCATCTAAATTATCATCAATCTGACCACAAACCTATCTTAGTCTCAATGGAGATGACAAGGTCTCGCATCAACTCTCGAAATAGGCCCAGAAAAGTGAGATTTGAAGAAAGTTGGGCTCACCTAGAGGAATGCAAAAATATTGTAAAAGAGATCTGGGCAAGAGGAAGTAATGTTCAAGCATGAGACATCAATCTTAAGGTTGAATCCATCCTTCAAAAGCTTTCTGCCTGGAATAGAGGCTTGGAGGCTCCATTCATGGGGCGGTGGAGAGAAAATATAGAGAGCTGCAAGCTATAGATAAAGGGCTTGGAAATTCTACCGAGGAAGCTATAGCTACTATTGAACGAGAGCTGAGTAATCTGCTGGAGGAAGAAGAAATCTTCTGGAAAATCAGATCTAGGGAGGAGTGGCTTAAGTGGGGAGATAGGAACACTAAATGGTTTCACTCCAAAGCCAATGAAAGAAGAAGAAAGAATACAATTAGAGGGATTTTCAATGAATCCGGAGATTGGGTGGAAGAAGAAGAAGATATCAGGGAAGTGGCTTCTAAGTATTTTGGCAAGTTATTCTCCTCGGCCAACCCAAATCCCGAAGCTATCAAGAGAGCTCTTCAATTTATTGACCAGAGAGTGACGGATAATCAAAGGGCTGCCATGAGACGACCTTTTAATAAGGAGGAAATAGAGAAAGTTATGAGAGGCTTAAAGGCGACTAAAGCTCCAGGTCCTGATGGAGCGCATGCGCTGTTCTTTCAAGCCTACTGGGACATAGTGGGAGAAGATGTGTCAAAGTGTGTCTTAACATTCTTAACGAAGAGGGAGAGTTAG
mRNA sequence
ATGGATAATCTGCCTTGGCTGGTGGGAGGGGACTTCAACGAGATTCTTTTTGCTAGTGAGAAGTTGGGAGGCTATAAAGGGGATAAATTCACATGGAAGATAAGAGACAAGAAAGGGGAGATTATAAAAGAGAGGCTAGATAGGTTTGTGGCTAATCCTAAGCTAATCGACAAAATGTTTAGAATGGAGGCATCCCATCTAAATTATCATCAATCTGACCACAAACCTATCTTAGTCTCAATGGAGATGACAAGGTCTCGCATCAACTCTCGAAATAGGCCCAGAAAAAGGCTTGGAGGCTCCATTCATGGGGCGGTGGAGAGAAAATATAGAGAGCTGCAAGCTATAGATAAAGGGCTTGGAAATTCTACCGAGGAAGCTATAGCTACTATTGAACGAGAGCTGAGTAATCTGCTGGAGGAAGAAGAAATCTTCTGGAAAATCAGATCTAGGGAGGAGTGGCTTAAGTGGGGAGATAGGAACACTAAATGGTTTCACTCCAAAGCCAATGAAAGAAGAAGAAAGAATACAATTAGAGGGATTTTCAATGAATCCGGAGATTGGGTGGAAGAAGAAGAAGATATCAGGGAAGTGGCTTCTAAGTATTTTGGCAAGTTATTCTCCTCGGCCAACCCAAATCCCGAAGCTATCAAGAGAGCTCTTCAATTTATTGACCAGAGAGTGACGGATAATCAAAGGGCTGCCATGAGACGACCTTTTAATAAGGAGGAAATAGAGAAAGTTATGAGAGGCTTAAAGGCGACTAAAGCTCCAGGTCCTGATGGAGCGCATGCGCTGTTCTTTCAAGCCTACTGGGACATAGTGGGAGAAGATGTGTCAAAGTGTGTCTTAACATTCTTAACGAAGAGGGAGAGTTAG
Coding sequence (CDS)
ATGGATAATCTGCCTTGGCTGGTGGGAGGGGACTTCAACGAGATTCTTTTTGCTAGTGAGAAGTTGGGAGGCTATAAAGGGGATAAATTCACATGGAAGATAAGAGACAAGAAAGGGGAGATTATAAAAGAGAGGCTAGATAGGTTTGTGGCTAATCCTAAGCTAATCGACAAAATGTTTAGAATGGAGGCATCCCATCTAAATTATCATCAATCTGACCACAAACCTATCTTAGTCTCAATGGAGATGACAAGGTCTCGCATCAACTCTCGAAATAGGCCCAGAAAAAGGCTTGGAGGCTCCATTCATGGGGCGGTGGAGAGAAAATATAGAGAGCTGCAAGCTATAGATAAAGGGCTTGGAAATTCTACCGAGGAAGCTATAGCTACTATTGAACGAGAGCTGAGTAATCTGCTGGAGGAAGAAGAAATCTTCTGGAAAATCAGATCTAGGGAGGAGTGGCTTAAGTGGGGAGATAGGAACACTAAATGGTTTCACTCCAAAGCCAATGAAAGAAGAAGAAAGAATACAATTAGAGGGATTTTCAATGAATCCGGAGATTGGGTGGAAGAAGAAGAAGATATCAGGGAAGTGGCTTCTAAGTATTTTGGCAAGTTATTCTCCTCGGCCAACCCAAATCCCGAAGCTATCAAGAGAGCTCTTCAATTTATTGACCAGAGAGTGACGGATAATCAAAGGGCTGCCATGAGACGACCTTTTAATAAGGAGGAAATAGAGAAAGTTATGAGAGGCTTAAAGGCGACTAAAGCTCCAGGTCCTGATGGAGCGCATGCGCTGTTCTTTCAAGCCTACTGGGACATAGTGGGAGAAGATGTGTCAAAGTGTGTCTTAACATTCTTAACGAAGAGGGAGAGTTAG
Protein sequence
MDNLPWLVGGDFNEILFASEKLGGYKGDKFTWKIRDKKGEIIKERLDRFVANPKLIDKMFRMEASHLNYHQSDHKPILVSMEMTRSRINSRNRPRKRLGGSIHGAVERKYRELQAIDKGLGNSTEEAIATIERELSNLLEEEEIFWKIRSREEWLKWGDRNTKWFHSKANERRRKNTIRGIFNESGDWVEEEEDIREVASKYFGKLFSSANPNPEAIKRALQFIDQRVTDNQRAAMRRPFNKEEIEKVMRGLKATKAPGPDGAHALFFQAYWDIVGEDVSKCVLTFLTKRES
Homology
BLAST of Lcy11g017970 vs. ExPASy Swiss-Prot
Match:
P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1)
HSP 1 Score: 70.1 bits (170), Expect = 4.7e-11
Identity = 50/200 (25.00%), Postives = 100/200 (50.00%), Query Frame = 0
Query: 96 KRLGGSIHGAVERKYRELQAIDKGLGNSTEEAIAT--IERE--LSNLLEEEEIFWKIRSR 155
K + G + +E E+ +++ L S ++A+ +ER+ L N+ + + +RSR
Sbjct: 302 KSVSGQRNAEIEALNGEVLDLEQRLSGSEDQALQCEYLERKEALRNMEQRQARGAFVRSR 361
Query: 156 EEWLKWGDRNTKWFHSKANERRRKNTIRGIFNESGDWVEEEEDIREVASKYFGKLFSSAN 215
+ L DR +++F++ ++ + I +F E G +E+ E IR+ A ++ LFS
Sbjct: 362 MQLLCDMDRGSRFFYALEKKKGNRKQITCLFAEDGTPLEDPEAIRDRARSFYQNLFSPDP 421
Query: 216 PNPEAIKRALQFIDQRVTDNQRAAMRRPFNKEEIEKVMRGLKATKAPGPDGAHALFFQAY 275
+P+A + + V++ ++ + P +E+ + +R + K+PG DG FFQ +
Sbjct: 422 ISPDACEELWDGLPV-VSERRKERLETPITLDELSQALRLMPHNKSPGLDGLTIEFFQFF 481
Query: 276 WDIVGEDVSKCVLTFLTKRE 292
WD +G D + + K E
Sbjct: 482 WDTLGPDFHRVLTEAFKKGE 500
BLAST of Lcy11g017970 vs. ExPASy TrEMBL
Match:
A0A2N9IJF6 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS52874 PE=4 SV=1)
HSP 1 Score: 185.3 bits (469), Expect = 3.7e-43
Identity = 116/359 (32.31%), Postives = 169/359 (47.08%), Query Frame = 0
Query: 3 NLPWLVGGDFNEILFASEKLG------------------------GYKGDKFTWKIRDKK 62
+LPWL GDFNEIL +EK G GYKG KFTW
Sbjct: 414 SLPWLCYGDFNEILEQNEKRGKRLRPWRRMCEFREVVNRCQFVDLGYKGYKFTWNNNRDV 473
Query: 63 GEIIKERLDRFVANPKLIDKMFRMEASHLNYHQSDHKPILVSMEMTRSRINSRNR----- 122
+KERLDR VA + + +HL +SDH PILV RS+ ++ R
Sbjct: 474 RAFVKERLDRVVATLSWTNLFNIISVTHLQISKSDHIPILVEAANQRSQTRNKRRLTRFE 533
Query: 123 -------------------------PRKRL-------------------GGSIHGAVERK 182
P RL GGS H + +
Sbjct: 534 EKWATHPDCETVIRGLWEEEVGEGSPMFRLTEKIKRCRMGLAQWSKQIFGGSQH-QIRAR 593
Query: 183 YRELQAIDKGLGNSTEEAIATIERELSNLLEEEEIFWKIRSREEWLKWGDRNTKWFHSKA 242
+ ++A+ G I+ ++ E+++LL +EI WK RSR WLK GD NTK+FH+ A
Sbjct: 594 FEAMEALTNDDGGQNRSLISDLKEEINSLLLSDEIHWKQRSRNTWLKEGDCNTKFFHNSA 653
Query: 243 NERRRKNTIRGIFNESGDWVEEEEDIREVASKYFGKLFSSANPNPEAIKRALQFIDQRVT 289
+R+R N I G+ NE G W+ E ++ ++ +YF +F+S+ P I+ A++ +D+ V
Sbjct: 654 TQRQRTNKIEGLLNEQGQWITEVGQLQSISEQYFKDIFTSS--TPPRIEEAMEVVDRVVN 713
BLAST of Lcy11g017970 vs. ExPASy TrEMBL
Match:
A0A2N9GII4 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS27130 PE=4 SV=1)
HSP 1 Score: 185.3 bits (469), Expect = 3.7e-43
Identity = 116/359 (32.31%), Postives = 169/359 (47.08%), Query Frame = 0
Query: 3 NLPWLVGGDFNEILFASEKLG------------------------GYKGDKFTWKIRDKK 62
+LPWL GDFNEIL +EK G GYKG KFTW
Sbjct: 589 SLPWLCYGDFNEILEQNEKRGKRLRPWRRMCEFREVVNRCQFVDLGYKGYKFTWNNNRDV 648
Query: 63 GEIIKERLDRFVANPKLIDKMFRMEASHLNYHQSDHKPILVSMEMTRSRINSRNR----- 122
+KERLDR VA + + +HL +SDH PILV RS+ ++ R
Sbjct: 649 RAFVKERLDRVVATLSWTNLFNIISVTHLQISKSDHIPILVEAANQRSQTRNKRRLTRFE 708
Query: 123 -------------------------PRKRL-------------------GGSIHGAVERK 182
P RL GGS H + +
Sbjct: 709 EKWATHPDCETVIRGLWEEEVGEGSPMFRLTEKIKRCRMGLAQWSKQIFGGSQH-QIRAR 768
Query: 183 YRELQAIDKGLGNSTEEAIATIERELSNLLEEEEIFWKIRSREEWLKWGDRNTKWFHSKA 242
+ ++A+ G I+ ++ E+++LL +EI WK RSR WLK GD NTK+FH+ A
Sbjct: 769 FEAMEALTNDDGGQNRSLISDLKEEINSLLLSDEIHWKQRSRNTWLKEGDCNTKFFHNSA 828
Query: 243 NERRRKNTIRGIFNESGDWVEEEEDIREVASKYFGKLFSSANPNPEAIKRALQFIDQRVT 289
+R+R N I G+ NE G W+ E ++ ++ +YF +F+S+ P I+ A++ +D+ V
Sbjct: 829 TQRQRTNKIEGLLNEQGQWITEVGQLQSISEQYFKDIFTSS--TPPRIEEAMEVVDRVVN 888
BLAST of Lcy11g017970 vs. ExPASy TrEMBL
Match:
A0A803QGA2 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 184.9 bits (468), Expect = 4.9e-43
Identity = 122/358 (34.08%), Postives = 175/358 (48.88%), Query Frame = 0
Query: 5 PWLVGGDFNEILFASEKLGG------------------------YKGDKFTWKIRDKKGE 64
PWLV GDFNEIL +K YKG+++TW + E
Sbjct: 132 PWLVIGDFNEILSQDDKNKSGYRNESQIEDFRSTLELCALHPLHYKGERYTW-AKSADNE 191
Query: 65 IIKERLDRFVANPKLIDKMFRMEASHLNYHQSDHKPILVSM-EMTRSRINSRNRPRKRLG 124
IKERLD + N D +HL+Y+ SDH+ +LV + + T +I S R R R
Sbjct: 192 SIKERLDWAMVNEAWEDSFSYTSLTHLDYYHSDHRALLVKVKDDTDLQIGSNKRKRFRFV 251
Query: 125 GSIHGAVERK----------------------------------------YRELQAIDKG 184
G E K +RE++ K
Sbjct: 252 NIWIGDEECKSLIKNCWRSEENTPLISTIKNIQQCATNLDTWHQNKCGSLFREIKDTQKK 311
Query: 185 L---------GNSTEEAIATIERELSNLLEEEEIFWKIRSREEWLKWGDRNTKWFHSKAN 244
+ G STE + +E +L+ LL +EE+FW+ R+R +WL+ GD+NTK+FH KAN
Sbjct: 312 VVQMHNLQSKGCSTEGS-RQLENKLNELLLKEEVFWQQRARVQWLQAGDQNTKFFHKKAN 371
Query: 245 ERRRKNTIRGIFNESGDWVEEEEDIREVASKYFGKLFSSANPNPEAIKRALQFIDQRVTD 289
RR+ NTIRG+FNE W E I ++ Y+ LF+S P E+I+ LQ ++Q VTD
Sbjct: 372 ARRKNNTIRGLFNEDHIWCTSNEAIGDITKSYYSALFTSIMPTNESIEELLQAVEQVVTD 431
BLAST of Lcy11g017970 vs. ExPASy TrEMBL
Match:
A0A2N9IPS8 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55418 PE=4 SV=1)
HSP 1 Score: 183.0 bits (463), Expect = 1.8e-42
Identity = 112/361 (31.02%), Postives = 175/361 (48.48%), Query Frame = 0
Query: 1 MDNLPWLVGGDFNEILFASEKLG------------------------GYKGDKFTWKIRD 60
+ + PWL GDFNEIL +E+LG GY G+ +TW+ +
Sbjct: 568 LSSSPWLCMGDFNEILDNNERLGSGHRPEWQIRDFREAVVHCGLHDLGYVGNSYTWRRKR 627
Query: 61 KKGEIIKERLDRFVANPKLIDKMFRMEASHLNYHQSDHKPILV----------------- 120
++ RLDR +A+ + SHL SDH PIL+
Sbjct: 628 DGNALVTARLDRMMASVSWLTDYDGSVVSHLAVQNSDHCPILLDIPDGPLVKRKKKLFRF 687
Query: 121 ---------------------------------SMEMTRSRINSRNRPRKRLGGSIHGAV 180
M++ R+ + +R R GS+ ++
Sbjct: 688 EAMWIKDEQCREVIDHAWGDGVTEGSPMFMVVEKMKLCRTSLIGWSRER---FGSLASSI 747
Query: 181 ERKYRELQAIDKGLGNSTEEAIATIERELSNLLEEEEIFWKIRSREEWLKWGDRNTKWFH 240
+RK +LQ + + I ++ +L+ LLE+EEIFW+ RSR W+ GD+NTK+FH
Sbjct: 748 KRKREQLQHLINETPSGFSTGILELQDDLNGLLEKEEIFWRQRSRVAWMSEGDKNTKFFH 807
Query: 241 SKANERRRKNTIRGIFNESGDWVEEEEDIREVASKYFGKLFSSANPNPEAIKRALQFIDQ 288
++ NERRR N I G+ + G W E+ I E+A YF +F+S+NP+ E+I LQ ++
Sbjct: 808 AQCNERRRTNHISGLRDRDGVWQTEKTKIAEIAVDYFQGIFTSSNPSAESITTVLQGMES 867
BLAST of Lcy11g017970 vs. ExPASy TrEMBL
Match:
A0A2N9F6W6 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10717 PE=4 SV=1)
HSP 1 Score: 180.6 bits (457), Expect = 9.2e-42
Identity = 109/312 (34.94%), Postives = 161/312 (51.60%), Query Frame = 0
Query: 1 MDNLPWLVGGDFNEILFASEKLG------------------------GYKGDKFTWKIRD 60
MD LPWL GDFNEIL E+ G G++G FTW R
Sbjct: 612 MDQLPWLCMGDFNEILSVDERTGEVPGMYGKMQDFNEVVNRCGLIDMGFRGVPFTWDNRR 671
Query: 61 KKGEIIKERLDRFVANPKLIDKMFRMEASHLNYHQSDHKPILVSMEMTRSRINSRNRPRK 120
+++RLDR +A +D SH+ SDH PILV ++++ +S +RP++
Sbjct: 672 DGDGFVQKRLDRALATASWLDCFSLSSVSHVLCSHSDHVPILVQLDVS----SSYHRPKR 731
Query: 121 RLGGSIHGAVERKYRELQAI-DKGLGNSTEEAIATIERELSNLLEEEEIFWKIRSREEWL 180
R RK+ E A+ + S AIA + E++ LL EE+ W+ RSR WL
Sbjct: 732 R---------PRKFEEKWALYPEQCFRSNNSAIAATKSEINRLLLSEELHWRQRSRMTWL 791
Query: 181 KWGDRNTKWFHSKANERRRKNTIRGIFNESGDWVEEEEDIREVASKYFGKLFSSANPNPE 240
GD NTK+FH+ A +RRR N + GI N+ +W ++ + VA +YF +LF+S+NP
Sbjct: 792 AVGDSNTKYFHNHAQQRRRTNHMVGILNDQNEWCTSDQQKQSVAVEYFQRLFASSNPT-- 851
Query: 241 AIKRALQFIDQRVTDNQRAAMRRPFNKEEIEKVMRGLKATKAPGPDGAHALFFQAYWDIV 288
I LQ +D+ VT + + PF +E+ + + +KAPGPD + FFQ +W ++
Sbjct: 852 RINETLQAVDRTVTQDANHKLLLPFTADEVRVALFQMHPSKAPGPDCMSSFFFQKFWHVI 908
BLAST of Lcy11g017970 vs. NCBI nr
Match:
XP_042952211.1 (uncharacterized protein LOC122289292 [Carya illinoinensis])
HSP 1 Score: 185.3 bits (469), Expect = 7.7e-43
Identity = 122/332 (36.75%), Postives = 172/332 (51.81%), Query Frame = 0
Query: 2 DNLPWLVGGDFNEILFASEKLG------------------------GYKGDKFTWKIRDK 61
D +PW GDFNE+ EK G G+KG KFTW + +
Sbjct: 65 DQVPWCTIGDFNEVCCQDEKEGGRPRPESQMREFWHALDENCLFDLGWKGCKFTWSNKHE 124
Query: 62 KGEIIKERLDRFVANPKLIDKMFRMEASHLNYHQSDHKPILVSME------MTRSRI--N 121
KERLDR VAN + I+ E L QSDHK +L+SM+ M R R+
Sbjct: 125 DQTFTKERLDRAVANWRWIEMFKNREVEVLTASQSDHKALLLSMDKGVVLHMKRRRLFRF 184
Query: 122 SRNRPRKRLGGSIHGAVERKYRELQAIDKGLGNSTE--------------EAIATIEREL 181
K GG++ V ++ R+ Q +K + TE + I +++REL
Sbjct: 185 EAKWTLKEDGGAVIEDVWKR-RKRQDAEKQIKEKTERLKVEQEEEGPHNVKIIKSLQREL 244
Query: 182 SNLLEEEEIFWKIRSREEWLKWGDRNTKWFHSKANERRRKNTIRGIFNESGDWVEEEEDI 241
LL +E+I WK R++ W K GD+NTK+FHS AN+RR KN I+ I + +G V E+ ++
Sbjct: 245 GLLLAQEDIKWKQRAKRNWYKNGDKNTKFFHSCANQRRIKNRIKEIKDANGQLVNEQGEM 304
Query: 242 REVASKYFGKLFSSANPNPEAIKRALQFIDQRVTDNQRAAMRRPFNKEEIEKVMRGLKAT 288
V S YF LF+S NP EAI L+ I RVT ++RP+ +EEI ++ + +
Sbjct: 305 ERVLSMYFQNLFASTNPTMEAIDECLRGIRPRVTLVMNEDLQRPYVEEEIRIALKQMASL 364
BLAST of Lcy11g017970 vs. NCBI nr
Match:
XP_023899730.1 (uncharacterized protein LOC112011598 [Quercus suber])
HSP 1 Score: 181.8 bits (460), Expect = 8.5e-42
Identity = 114/320 (35.62%), Postives = 167/320 (52.19%), Query Frame = 0
Query: 4 LPWLVGGDFNEILFASEKLG------------------------GYKGDKFTWKIRDKKG 63
LPW GDFNE+L +K G GY G +TW R +G
Sbjct: 121 LPWCCFGDFNELLQVEDKQGGAPRAHYLIQAFRDVLDLCGFVDLGYSGLDYTWHGR-CRG 180
Query: 64 EIIKERLDRFVANPKLIDKMFRMEASHLNYHQSDHKPILVSMEMTRSRINSRNRP----- 123
E+I ERLDR VAN + + + HLN SDH+PIL+S+ + R +P
Sbjct: 181 ELIWERLDRGVANYEWLARFPTGRIRHLNCFTSDHRPILLSLNLNGEHQRWRRKPFRFEA 240
Query: 124 ----RKRLGGSIHGAVERKYRELQAIDKGLGNSTEEAIATIERELSNLLEEEEIFWKIRS 183
G I A E + +A+ G + + +++EL+ L +EE W+ RS
Sbjct: 241 MWLTNSECNGIISRAWEERLWRAEAVSVRSGE--VDVVILLKKELNELCAQEERMWQQRS 300
Query: 184 REEWLKWGDRNTKWFHSKANERRRKNTIRGIFNESGDWVEEEEDIREVASKYFGKLFSSA 243
R +WL+ GD+NTK+FHS + +R+R+N I+G+ +E+G W E EE I + +Y+ LF S+
Sbjct: 301 RVQWLQSGDQNTKFFHSVSTQRKRRNFIKGLRDENGIWQENEEVISGLLIEYYANLFMSS 360
Query: 244 NPNPEAIKRALQFIDQRVTDNQRAAMRRPFNKEEIEKVMRGLKATKAPGPDGAHALFFQA 291
NP + R L+ + VT+ RAA+ RPF EE+E ++ + KA G DG LF+Q
Sbjct: 361 --NPRNLDRILEGVQPVVTEEMRAALARPFIVEEVECAIKDMAPLKALGSDGMPPLFYQT 420
BLAST of Lcy11g017970 vs. NCBI nr
Match:
XP_030939698.1 (uncharacterized protein LOC115964550 [Quercus lobata])
HSP 1 Score: 177.9 bits (450), Expect = 1.2e-40
Identity = 111/357 (31.09%), Postives = 181/357 (50.70%), Query Frame = 0
Query: 3 NLPWLVGGDFNEILFASEKLG------------------------GYKGDKFTWKIRDKK 62
++PWL GDFNEIL + EK G GY+G+ FTW + +
Sbjct: 509 SVPWLCFGDFNEILQSEEKQGGLPKPLAPMLNFREALLYCGLVDLGYQGNMFTW--TNGR 568
Query: 63 GEIIKERLDRFVANPKLIDKMFRMEASHLNYHQSDHKPILVS------------------ 122
++++ERLDR A + DK +++ +HL SDH PILV+
Sbjct: 569 DDLVQERLDRACATIEWRDKFAQVQVTHLEASYSDHNPILVTTHIRPHPTLKKKIPHRFE 628
Query: 123 ------------MEMTRSRINSRNRPRKRLGGSI--------------HGAVERKYRELQ 182
++M I P +L I G + + +E Q
Sbjct: 629 ERWATHPDCENIIQMAWDSIVPNGSPMAKLFEKIKRCRFALVDWSRITFGLSKPQLQEKQ 688
Query: 183 AI--DKGLGNSTE--EAIATIERELSNLLEEEEIFWKIRSREEWLKWGDRNTKWFHSKAN 242
I + + N E I +++ E++N++ ++E+FW+ RSR WL GD+NTK+FH++A+
Sbjct: 689 KILEELCIQNRAENVRTIKSLKAEITNIIHQDELFWRQRSRSIWLPAGDKNTKYFHNRAS 748
Query: 243 ERRRKNTIRGIFNESGDWVEEEEDIREVASKYFGKLFSSANPNPEAIKRALQFIDQRVTD 288
+RRRKN I G+F+ W +E I +VA YF +LFS+A +P+ ++ LQ + ++VT
Sbjct: 749 QRRRKNHISGVFDSDERWCTSDEQIAKVAEFYFQELFSTA--HPQNMESVLQSVQRKVTP 808
BLAST of Lcy11g017970 vs. NCBI nr
Match:
XP_030930577.1 (uncharacterized protein LOC115956294 [Quercus lobata])
HSP 1 Score: 176.8 bits (447), Expect = 2.7e-40
Identity = 121/358 (33.80%), Postives = 174/358 (48.60%), Query Frame = 0
Query: 3 NLPWLVGGDFNEILFASEKLG------------------------GYKGDKFTWKIRDKK 62
+LPWL GDFNEIL++ EKLG GY+GDKFTWK R ++
Sbjct: 107 SLPWLCAGDFNEILWSHEKLGLGPRNEGCMKAFRDTLDECGLKDLGYRGDKFTWKGR-RQ 166
Query: 63 GEIIKERLDRFVANPKLIDKMFRMEASHLNYHQSDHKPILVSMEMTRSRINSRNRPRK-- 122
G ++ ERLD+ VAN + HLN H SDHKPI++ + I + NRP K
Sbjct: 167 GGMVFERLDKAVANNQWFFLNPGSVIHHLNTHSSDHKPIVIFPD---GIIPNLNRPFKFE 226
Query: 123 --------------------------------------------RLG-GSIHGAVERKYR 182
RL G+I ++E +
Sbjct: 227 KMWLSDGGCSRTVKDAWGPSSPDASMALIAGKLKNCGDKLLAWSRLSFGNIKRSIELNSK 286
Query: 183 ELQ--AIDKGLGNSTEEAIATIERELSNLLEEEEIFWKIRSREEWLKWGDRNTKWFHSKA 242
+L I G I +++ EL+NLL++E W RSR +LK GDRN K+FHSK
Sbjct: 287 KLNRAEIAAAEGRGDANLIWSLKTELNNLLDKESQMWHQRSRILFLKEGDRNAKYFHSKT 346
Query: 243 NERRRKNTIRGIFNESGDWVEEEEDIREVASKYFGKLFSSANPNPEAIKRALQFIDQRVT 288
++R R+N I G+ NE+ W E+ I+E+A++Y+ LFSS+ P L+ I VT
Sbjct: 347 SQRFRRNRILGLRNEANTWCSEDSQIKEIATQYYHTLFSSSQPTD--FNSILEAIHPSVT 406
BLAST of Lcy11g017970 vs. NCBI nr
Match:
XP_030923330.1 (uncharacterized protein LOC115950239 [Quercus lobata])
HSP 1 Score: 176.8 bits (447), Expect = 2.7e-40
Identity = 119/363 (32.78%), Postives = 171/363 (47.11%), Query Frame = 0
Query: 5 PWLVGGDFNEILFASEKLG------------------------GYKGDKFTWKIRDKKGE 64
PW+V GDFN L ASEK+ G+KG +TW +
Sbjct: 523 PWVVIGDFNAYLHASEKMSARQPQFSQIEAFREALSSCQLHDLGFKGYPYTWSNKRPGEA 582
Query: 65 IIKERLDRFVANPKLIDKMFRMEASHLNYHQSDHKPILVSMEMTRSRINSRNRPRKRLGG 124
K RLDR VAN + D+ HL+ H SDH P+L+ + S ++PR+ G
Sbjct: 583 NTKIRLDRGVANKEWTDRFQMSRVVHLSSHASDHLPLLL-------HVQSFSQPRQHCGR 642
Query: 125 SIH-----------------------------GAVERKYR----ELQAIDKGLGNSTEEA 184
S AV+ K + EL A + + A
Sbjct: 643 SFKFEESWLLQDECAAVIQEAWGNGDGNRDGLAAVQEKIKACGVELMAWGSSITDPDTGA 702
Query: 185 IATIEREL-----------------------SNLLEEEEIFWKIRSREEWLKWGDRNTKW 244
I I+++L +LL+++EI+W RSR WL+ GDRNTK+
Sbjct: 703 IKEIQKQLDRLNETELTEASKAEFLNLSKKMDDLLQKQEIYWAQRSRINWLRHGDRNTKF 762
Query: 245 FHSKANERRRKNTIRGIFNESGDWVEEEEDIREVASKYFGKLFSSANPNPEAIKRALQFI 288
FH+KA++RRRKN IRGI N G WVE E++ +VA+ YF LF + + ++ L +
Sbjct: 763 FHAKASQRRRKNFIRGIRNSQGQWVENLEEVGQVAADYFDNLFQAG--AGDQMEECLDAV 822
BLAST of Lcy11g017970 vs. TAIR 10
Match:
AT1G43760.1 (DNAse I-like superfamily protein )
HSP 1 Score: 60.1 bits (144), Expect = 3.5e-09
Identity = 46/193 (23.83%), Postives = 86/193 (44.56%), Query Frame = 0
Query: 100 GSIHGAVERKYRELQAIDKGLGNSTEEAIATIE----RELSNLLEEEEIFWKIRSREEWL 159
G+I + L++I L + +++ +E ++ + E F++ +SR +WL
Sbjct: 385 GNIQHKTKEALDSLESIQSQLLTNPSDSLFRVEHVARKKWNFFAAALESFYRQKSRIKWL 444
Query: 160 KWGDRNTKWFHSKANERRRKNTIRGIFNESGDWVEEEEDIREVASKYFGKLFSSANP--N 219
+ GD NT++FH + KN I+ + + VE ++E+ Y+ L S +
Sbjct: 445 QDGDANTRFFHKVILANQAKNLIKFLRMDDDVRVENVTQVKEMIVAYYTHLLGSDSDILT 504
Query: 220 PEAIKRALQFIDQRVTDNQRAAMRRPFNKEEIEKVMRGLKATKAPGPDGAHALFFQAYWD 279
P++++R R D + + + +EI + + KAPGPD A FF W
Sbjct: 505 PDSVQRIKDIHPFRCNDTLASRLSALPSDKEITAAVFAMPRNKAPGPDSFTAEFFWESWF 564
Query: 280 IVGEDVSKCVLTF 287
+V + V F
Sbjct: 565 VVKDSTIAAVKEF 577
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P14381 | 4.7e-11 | 25.00 | Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV... | [more] |
Match Name | E-value | Identity | Description | |
A0A2N9IJF6 | 3.7e-43 | 32.31 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS52874 PE=4 SV=1 | [more] |
A0A2N9GII4 | 3.7e-43 | 32.31 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS27130 PE=4 SV=1 | [more] |
A0A803QGA2 | 4.9e-43 | 34.08 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A2N9IPS8 | 1.8e-42 | 31.02 | Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... | [more] |
A0A2N9F6W6 | 9.2e-42 | 34.94 | Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... | [more] |
Match Name | E-value | Identity | Description | |
AT1G43760.1 | 3.5e-09 | 23.83 | DNAse I-like superfamily protein | [more] |