Lcy11g017870 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g017870
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Lipid transfer-like protein
Location	Chr11: 43921908 .. 43925629 (-)
RNA-Seq Expression	Lcy11g017870
Synteny	Lcy11g017870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGACGTTTAAATGCGACCATAACTTGACGAACTAAAACATTAAATAGCGCGTGAATTGCACGCTTAAGAAATCGCGTGAGCGTTCTATTTGTTTTCCCACGCGCAATTCAATTTCACACTTCAATTCAGCGTGTTACCAACAATTTCTGCATTTCCATTTCTATAAAGTCCAAAAAGAACTCTGAAACAAAAAACGAAAACGAATACGAAAATCTAAGCGTTGTTTGAAAGCGACGTCGTTTGATGAAAATGGCTCGCAGTGAGATCTCCGTGGCCGTCGCCGTCGTGGCGGTGGTAGTGGTGGTGGTGACCGCCGCCTTCGTGGAGGCGCAGGTGCCGGACTGTGCTTCAAAGCTAGCAGGGTGCGCGGAGTTCCTGAAGTCCGATAATCCGCCGGCGACGTGCTGCGATCCGATCAAGCAAGCGGTGACGACGCAGCTCGATTGCCTCTGCAACCTCTACACCTCGCCGGATTTCTTGCCGTCGATCGGCGTTAATGTCTCCGACGCTCTCCATCTCACTAAAGCCTGCGGCGTCCCCGTCGATCTCTCCAAGTGCAGCAAAAGTATGACAGTTGTTTAGATTCCAAAGGAATTTTGGCTTGATTTCAAAGGAATTTTGGCTTGATTTCGTTCGATTTTGTTCTTCTTGTTGTTCGATTTATTCTCTGATTTTGTTTTTGTGTTTGGTTCTGTGATTAATTATTGGTTTAATTTTTCTATTCTGCTCTGCTGTTAATGTAAACAGCTTCTGCTCCGGCTCCGCAGCAAGGTTCACCACCGGCAGGTAAATTTTTCGAACTTTCATGCCTACTTTCGTCATTTCACTCTTTTGAAAAAAAAAATCTGCAAACTCGTTGATTTTTTTTCTTCGGTTGAATAATTCAGTTTTTCTTTTTCTTTCTAAATAATGACGTGTGAATATTTCACGTTTATGACAGCTGGATTTTCTTTTTGTGAATAAATTTATTGGTGTTTATCAGTCAACCCATTTTTTTTTAGTTAAAAAATATAAGTCCCAAAAAAAATAAGAATTTTAAAAAAATAAAATTAGTGAATTGGTCTACAGTGTACTTAAACATTTGCCCAAATTTTCATATCATCCTCCACTCTTAATGTCAACCTGAGTAAATAAAAAATAGCCAACTATGATGATTTTTTGAAATATTGTAGATATTATTAAAGAATTTTAAAGGTTGGTTGAATGTATTTTTTTAAAAAAGTATTTTTGTATTTGTTTTATAGGTTTCTAAATTGTGTGTGTTTTGTTTAAATTTTATTTTAAAAAATTAGTTGGAAAGATATTTTGAGGTGTTGTTGTTTATGTAAGGTCTTTAATTAGGTTTTATTTTGGTCCATGAGTTTTCAAACTCGACAATTTAGTCCGAGTTTTGGATTTCGTTTCAATGGTTAAATGAAACCTAACCCAACGACCCTTCGGACTATTTTTTTTTTTTTTTTTTTTACAATTGTGAGAGATTCAAATCACAGACCTTTTGGTCATTAGTACAAGTTTTATGTCAATTGAGTCATACTCTTGTTAGCCAACGTATTTAAATTTAGTTATACTTGAAAAATAACTAGGGATTTTATATGTATTATAAGTTTAACCAACTACAAGACATGTAATAATAATATGATTTTTTTTTTTTGTTCAAAAGTTACTTTTAAAAATTATCCCACCAAACAAAATTTTCTGTTTTTTAGTTATTAGAAACTGTAATTTATTTTTAAATATTTCTAATATAATAATATTCTAGCAAACCCTTAATTTCTCTCTTTGATAAAAAAAAATTAGAGACAAAGTTTGAAGAGTTTCTGGAATATTCTACGAGAGCCTAACTTAACTGTCATAAAATTTATATCCTCGATCAAAAGTAATGGGTACTTGGAGGAGTATTGATGAGAAGCCCTGTTTTTCTTTAATTGTATGAGGAGACTAATGGGAAAATTTCTTGATTGTTCAAAGCAAACCTAACAAGGGGCCCACTTTCTTCTGGTTTTTCACACAAAATAAGCTTATGAGAATGGTTTCTTCCCTCACTCTCTCTCCTTTCTTTTTCTTTCCTTTTTTATAATTACCTTTTTGATCTCCAAACTTTAGACTAATTATGTTGATTTCATCCTTCAATTTCAAAATAATAAATAATAATAAATATTCTTGTTGAGTCCCTTGGTTAACATTTTTAAAATAAAATATTAATAAAGTAATAATAATAGTTTTAATGAAAAAATAATATGATAAAAATTTTCTTGAAGGTTCTTCTCCCACTTTCTTTGCCCAATATAATATTGTATTTGAATTTTGAGGATGAAATTTCCAACAACTTTCTTACTTTTTAGGATTTAATTGTTTTTTTTTTATTTTAATGTACATTTTCTGAAAATAATGTATTATCAAAAGTATCAACAAAAAGAAGGTGATCTAGGATGTGAAAATCAAGTTTAGATTTTTTTTCTTTTTATAAATTAAAGGAAAAAAAAAAAAGACAAAGCATTTTAATATATAGAAACTTACTAGACAAAATTATTTTTTAGAAGTATGTTATTTAATAAAAATTAACAAAAAAACATAACTTTGTTATATTTTCACATGTTTCATTAGCGTTTTCTCAAGGAATTCTTTATTAATAATGATTTTTTATTATTATTATTTTTTTTAGAAGGCTTAATAATGATTATAAATTTAGCGTTATTTATTATTATATTATTATTATTATTTTCACAATGAGGAAAATATTCGAACTTTTGATCTCTTAGTTGAAAGTACATATTTTATGGCCAATTAAGCTATACTCATATTGACTATAACTTTAGTGTTATATTTTCAAATATCATATAAAAGAAGTAAATGAGAATATAATAGCAAAAAAATGTCTTTTTAAATAATTTATTAAAATAAAAAAATTGAAATTTTGGTCAATAAAACAATTTTTTAAAAGAATACTCCCAAGACAGCCCCAAATATTTTTCACTATTAACTTCTTTGTTACATTTTCTACTTCTTACAAATACATCCAAAATAATCTTATCCCATGAAATAGAAAACAACCAACAATGTCATTAATTAAAAGATTTGCTAACTCAACTAACATAAAAAGTTGTGGTTAATGACCAAGAGGTCTGTAATTCAAATCTCTCACCCTCGTATTACAAAAAAAAAAATTAAATGGATTTTTTTTTGAGTAAATTAAATGGACTCTTACAGTTTCTCAATCAGAGGGCTATTTAAATTGGTTTGAAATAGTATGATTATTGTTACTTTAGAAACATGTTGAAGATTGACACTTCATTCTATCCAACATTCTTCTTGGTTTATGAACTAATTTTTGTGATATTTTTTGGAACAGTTCCTGGAAATGATGCAGAAAAACTTGCATTAACTGGATTTACATCTCTGCTCTTGTTCGTCGCCTCCCTAATCTTGTATTAGGATCTCGTAGTTTCAAGCATAGTGGATTGAACATATTATTATTAGAGTAAATCACATCGTTGAGTTTTTGATATATATATACTTTAGGGGTTGAGGTGAAAGTGAAAGGAAAACTCCATATTTGGAGCATTTGTTTGCTTGTGTCTATTTGTATCATGTTTGGTCTCCTTACCACAATATTAATTTGATTTGAGATATGGTCTAATAGTCATTGTGATTTGATCAGTTTCAATAATGTAATACTCTTTGTATTCTATTTGAGTTATAATAGCCAAAGTCCATTTTATTAA

mRNA sequence

CGACGTTTAAATGCGACCATAACTTGACGAACTAAAACATTAAATAGCGCGTGAATTGCACGCTTAAGAAATCGCGTGAGCGTTCTATTTGTTTTCCCACGCGCAATTCAATTTCACACTTCAATTCAGCGTGTTACCAACAATTTCTGCATTTCCATTTCTATAAAGTCCAAAAAGAACTCTGAAACAAAAAACGAAAACGAATACGAAAATCTAAGCGTTGTTTGAAAGCGACGTCGTTTGATGAAAATGGCTCGCAGTGAGATCTCCGTGGCCGTCGCCGTCGTGGCGGTGGTAGTGGTGGTGGTGACCGCCGCCTTCGTGGAGGCGCAGGTGCCGGACTGTGCTTCAAAGCTAGCAGGGTGCGCGGAGTTCCTGAAGTCCGATAATCCGCCGGCGACGTGCTGCGATCCGATCAAGCAAGCGGTGACGACGCAGCTCGATTGCCTCTGCAACCTCTACACCTCGCCGGATTTCTTGCCGTCGATCGGCGTTAATGTCTCCGACGCTCTCCATCTCACTAAAGCCTGCGGCGTCCCCGTCGATCTCTCCAAGTGCAGCAAAACTTCTGCTCCGGCTCCGCAGCAAGGTTCACCACCGGCAGTTCCTGGAAATGATGCAGAAAAACTTGCATTAACTGGATTTACATCTCTGCTCTTGTTCGTCGCCTCCCTAATCTTGTATTAGGATCTCGTAGTTTCAAGCATAGTGGATTGAACATATTATTATTAGAGTAAATCACATCGTTGAGTTTTTGATATATATATACTTTAGGGGTTGAGGTGAAAGTGAAAGGAAAACTCCATATTTGGAGCATTTGTTTGCTTGTGTCTATTTGTATCATGTTTGGTCTCCTTACCACAATATTAATTTGATTTGAGATATGGTCTAATAGTCATTGTGATTTGATCAGTTTCAATAATGTAATACTCTTTGTATTCTATTTGAGTTATAATAGCCAAAGTCCATTTTATTAA

Coding sequence (CDS)

ATGAAAATGGCTCGCAGTGAGATCTCCGTGGCCGTCGCCGTCGTGGCGGTGGTAGTGGTGGTGGTGACCGCCGCCTTCGTGGAGGCGCAGGTGCCGGACTGTGCTTCAAAGCTAGCAGGGTGCGCGGAGTTCCTGAAGTCCGATAATCCGCCGGCGACGTGCTGCGATCCGATCAAGCAAGCGGTGACGACGCAGCTCGATTGCCTCTGCAACCTCTACACCTCGCCGGATTTCTTGCCGTCGATCGGCGTTAATGTCTCCGACGCTCTCCATCTCACTAAAGCCTGCGGCGTCCCCGTCGATCTCTCCAAGTGCAGCAAAACTTCTGCTCCGGCTCCGCAGCAAGGTTCACCACCGGCAGTTCCTGGAAATGATGCAGAAAAACTTGCATTAACTGGATTTACATCTCTGCTCTTGTTCGTCGCCTCCCTAATCTTGTATTAG

Protein sequence

MKMARSEISVAVAVVAVVVVVVTAAFVEAQVPDCASKLAGCAEFLKSDNPPATCCDPIKQAVTTQLDCLCNLYTSPDFLPSIGVNVSDALHLTKACGVPVDLSKCSKTSAPAPQQGSPPAVPGNDAEKLALTGFTSLLLFVASLILY

Homology

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BLAST of Lcy11g017870 vs. ExPASy Swiss-Prot
Match: Q6NLF7 (Non-specific lipid transfer protein GPI-anchored 7 OS=Arabidopsis thaliana OX=3702 GN=LTPG7 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 3.9e-14
Identity = 54/153 (35.29%), Postives = 80/153 (52.29%), Query Frame = 0


Query: 3   MARSEISVAVAVVAVVVVVVTAAFVEAQVPDCASKLAGCAEFLKSDNPPA-TCCDPIKQA 62
           M ++ +  A A+  + +++V    +EAQ  +C SKL  C   L +   P   CCD IK+A
Sbjct: 1   MTKTMMIFAAAMTVMALLLVPT--IEAQT-ECVSKLVPCFNDLNTTTTPVKECCDSIKEA 60

Query: 63  VTTQLDCLCNLYTSPDFLPSIGVNVSDALHLTKACGVPVDLSKCSKTSAPAPQQGSPPAV 122
           V  +L CLC +YTSP  L    V    AL L++ C V  DLS C+   AP+P+   PP  
Sbjct: 61  VEKELTCLCTIYTSPGLLAQFNVTTEKALGLSRRCNVTTDLSACTAKGAPSPKASLPPPA 120

Query: 123 PGNDAE-------KLALTGFTSLLLFVASLILY 148
           P  + +       KLA  G T+++L + S I +
Sbjct: 121 PAGNTKKDAGAGNKLAGYGVTTVILSLISSIFF 150

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BLAST of Lcy11g017870 vs. ExPASy Swiss-Prot
Match: Q1PFD8 (Non-specific lipid transfer protein GPI-anchored 9 OS=Arabidopsis thaliana OX=3702 GN=LTPG9 PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.2e-12
Identity = 51/140 (36.43%), Postives = 76/140 (54.29%), Query Frame = 0


Query: 8   ISVAVAVVAVVVVVVTAAFVEAQVPDCASKLAGCAEFLKSDN--PPATCCDPIKQAVTTQ 67
           ++V VAVV +  V  TA     Q+  C  KL  C  ++ S N  PP +CC P+K+ V   
Sbjct: 7   LAVVVAVVVLYSVEATAQGGNPQLTACLQKLLPCQPYIHSLNPPPPPSCCGPMKEIVEKD 66

Query: 68  LDCLCNLYTSPDFLPSIGVNVSDALHLTKACGVPVDLSKCSKTSAPAPQQGSPPAVPG-N 127
             CLC  + +P+ L ++ +   +AL L KACGV  D+S CSK + P+P   SP +  G +
Sbjct: 67  APCLCIAFNNPEVLKALNLTKENALLLPKACGVNPDVSLCSKIATPSP-IASPGSTNGTS 126

Query: 128 DAEKLALTGFTSLLLFVASL 145
            A  ++   F+ L  FVA +
Sbjct: 127 SASTISFNRFSFLSAFVAMI 145

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BLAST of Lcy11g017870 vs. ExPASy Swiss-Prot
Match: Q9STH5 (Non-specific lipid transfer protein GPI-anchored 24 OS=Arabidopsis thaliana OX=3702 GN=LTPG24 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.0e-10
Identity = 43/122 (35.25%), Postives = 63/122 (51.64%), Query Frame = 0


Query: 33  DCASKLAGCAEFLKSDNPPA-TCCDPIKQAVTTQLDCLCNLYTSPDFLPSIGVNVSDALH 92
           +CA+ LA C   +    PP+  CC  ++ A+TTQL CLC    SP  L    V   +AL 
Sbjct: 41  NCAAGLAVCLPAITQRGPPSQECCTAVETALTTQLSCLCGFIKSPMLLIPFNVTDFNAL- 100

Query: 93  LTKACGVPVDLSKCSKTSAPAPQQGSPPAVPG------NDAEKLALTGFTSLLLFVASLI 148
            +K CG+  D + CS+T+A AP   +   VPG      + A KLA TG   +++   + +
Sbjct: 101 FSKTCGLTTDPNLCSETAAQAPLPKTAAPVPGAPKSDKDAASKLAGTGLVGIVVITIAAM 160

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BLAST of Lcy11g017870 vs. ExPASy Swiss-Prot
Match: Q9LE56 (Non-specific lipid transfer protein GPI-anchored 3 OS=Arabidopsis thaliana OX=3702 GN=LTPG3 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.7e-09
Identity = 48/138 (34.78%), Postives = 64/138 (46.38%), Query Frame = 0


Query: 8   ISVAVAVVAVVVVVVTA-----------AFVEAQVPDCASKLAGCAEFLK-SDNPPATCC 67
           +  AVAVV V   V ++           A  +A    C  KL  C  +L  +  PPATCC
Sbjct: 4   VRFAVAVVLVFCYVTSSNAQMTSPPSGGAGGDAHSLPCIQKLMPCQPYLHLATPPPATCC 63

Query: 68  DPIKQAVTTQLDCLCNLYTSPDFLPSIGVNVSDALHLTKACGVPVDLSKCSKTSAPAPQQ 127
            P+ + V     CLC ++ + D L S+ +   +AL L KACG   D+S C KTSA     
Sbjct: 64  MPLNEIVAKDATCLCAVFNNVDMLKSLNLTKENALDLPKACGAKADVSLC-KTSAGTNSS 123

Query: 128 GSPPAVPGNDAEKLALTG 134
            +PPA P         TG
Sbjct: 124 STPPATPKTPPASSTSTG 140

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BLAST of Lcy11g017870 vs. ExPASy Swiss-Prot
Match: B3H587 (Non-specific lipid transfer protein GPI-anchored 8 OS=Arabidopsis thaliana OX=3702 GN=LTPG8 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 5.5e-08
Identity = 45/146 (30.82%), Postives = 68/146 (46.58%), Query Frame = 0


Query: 8   ISVAVAVVAVVVVVVTAAFV--EAQVPDCASKLAGCAEFLK-SDNPPATCCDPIKQAVTT 67
           + V   VV +  V VTA F     Q   C +KL  C  ++  S  PP  CC+P+KQ    
Sbjct: 7   LGVVTTVVILYSVQVTAQFFGDVQQAMRCVAKLMPCQPYIHLSIPPPPLCCNPMKQIAEK 66

Query: 68  QLDCLCNLYTSPDFLPSIGVNVSDALHLTKACGVPVDLSKCSKTSAPAPQQGSPPAVPGN 127
            + CLC  +  PD L  + +   +A+ +  +CG+  D S C+KT+  +P      A  GN
Sbjct: 67  DVSCLCTAFKHPDLLRFLALTKENAIKILDSCGINHDPSVCNKTNPSSPAALPEAATSGN 126

Query: 128 DAE-----KLALTGFTSLLLFVASLI 146
                    LA+T F    +F+  +I
Sbjct: 127 SFSTKKNTALAITFFGFSFVFLGMII 152

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BLAST of Lcy11g017870 vs. ExPASy TrEMBL
Match: A0A0A0L702 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G035840 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.6e-47
Identity = 108/148 (72.97%), Postives = 121/148 (81.76%), Query Frame = 0


Query: 3   MARSEISVAVAVVAVVVVVVTAAFVEAQ-VPDCASKLAGCAEFLKSDNPPATCCDPIKQA 62
           MAR EISV V++VAVVV+VV  AF+EAQ VPDC SKL  C +FLKS+NPPATCCDPIK+A
Sbjct: 1   MARGEISVPVSLVAVVVLVVAVAFLEAQEVPDCVSKLTSCVDFLKSNNPPATCCDPIKEA 60

Query: 63  VTTQLDCLCNLYTSPDFLPSIGVNVSDALHLTKACGVPVDLSKCSKTSAPAPQQG--SPP 122
           V TQL CLCNLYT+P  L S GVNV+DA+HLT ACGVPV+LSKC KT APAPQQG  SPP
Sbjct: 61  VATQLPCLCNLYTTPGLLNSFGVNVTDAIHLTNACGVPVELSKC-KTGAPAPQQGGPSPP 120

Query: 123 AVPGNDAEKLALTGFTSLLLFVASLILY 148
            VPGN AEK  LTG TSLL+F+ASL  Y
Sbjct: 121 GVPGNHAEKFGLTGITSLLVFLASLAFY 147

[Close]

BLAST of Lcy11g017870 vs. ExPASy TrEMBL
Match: A0A5D3D7F6 (Non-specific lipid-transfer protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G001390 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 2.4e-46
Identity = 109/149 (73.15%), Postives = 120/149 (80.54%), Query Frame = 0


Query: 3   MARSEISVAVAVVAVVVVVVTAAFVEAQ-VPDCASKLAGCAEFLKSDNPPATCCDPIKQA 62
           MAR EISV  AVVAVVV+VV   FVEAQ VPDC SKL  C +FLKS+NPPATCCDPIK+A
Sbjct: 1   MARGEISVPFAVVAVVVLVVAVGFVEAQDVPDCVSKLTPCVDFLKSNNPPATCCDPIKEA 60

Query: 63  VTTQLDCLCNLYTSPDFLPSIGVNVSDALHLTKACGVPVDLSKCSKTSAPAPQQG--SPP 122
           V TQL CLCNLY +P  L S GVNVSDA+HLT ACGVPV+LSKC KT APAPQQG  SPP
Sbjct: 61  VATQLPCLCNLYVTPGLLNSFGVNVSDAIHLTNACGVPVELSKC-KTGAPAPQQGAPSPP 120

Query: 123 AVPGNDAEKLALTGFTSL-LLFVASLILY 148
            VPGNDA+K   TG TSL LLF+ASL++Y
Sbjct: 121 GVPGNDAQKFGSTGITSLVLLFLASLVVY 148

[Close]

BLAST of Lcy11g017870 vs. ExPASy TrEMBL
Match: A0A1S3BK67 (non-specific lipid-transfer protein 1 OS=Cucumis melo OX=3656 GN=LOC103490924 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 4.5e-45
Identity = 107/149 (71.81%), Postives = 118/149 (79.19%), Query Frame = 0


Query: 3   MARSEISVAVAVVAVVVVVVTAAFVEAQ-VPDCASKLAGCAEFLKSDNPPATCCDPIKQA 62
           MA  EISV  AVVAVVV+ V   FVEAQ VPDC SKL  C +FLKS+NPPATCCDPIK+A
Sbjct: 1   MAGGEISVPFAVVAVVVLAVAVGFVEAQDVPDCVSKLTPCVDFLKSNNPPATCCDPIKEA 60

Query: 63  VTTQLDCLCNLYTSPDFLPSIGVNVSDALHLTKACGVPVDLSKCSKTSAPAPQQG--SPP 122
           V TQL CLCNLY +P  L S GVNVSDA+HLT ACGVPV+LSKC KT APAPQQG  SPP
Sbjct: 61  VATQLPCLCNLYVTPGLLNSFGVNVSDAIHLTNACGVPVELSKC-KTGAPAPQQGAPSPP 120

Query: 123 AVPGNDAEKLALTGFTSL-LLFVASLILY 148
            VPGNDA+K   TG TSL LLF+ASL++Y
Sbjct: 121 GVPGNDAQKFGSTGITSLVLLFLASLVVY 148

[Close]

BLAST of Lcy11g017870 vs. ExPASy TrEMBL
Match: A0A6J1EBU7 (non-specific lipid transfer protein-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111431142 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 5.8e-45
Identity = 105/137 (76.64%), Postives = 112/137 (81.75%), Query Frame = 0


Query: 12  VAVVAVVVVVVTAAFVEAQVPDCASKLAGCAEFLKSDNPPATCCDPIKQAVTTQLDCLCN 71
           V+VVAVVVVVV   FVEAQ PDCASKLA CAEFLKS+NPPATCC+PIK+AV TQLDCLCN
Sbjct: 6   VSVVAVVVVVVAVGFVEAQQPDCASKLASCAEFLKSNNPPATCCNPIKEAVATQLDCLCN 65

Query: 72  LYTSPDFLPSIGVNVSDALHLTKACGVPVDLSKCSKTSAPAPQQGSPPAVPGNDAEKL-A 131
           LYTSPDF  SIGVNVSDALHLTKACGVPVDLSKC KT APAP  GSP   P + A  L A
Sbjct: 66  LYTSPDFFSSIGVNVSDALHLTKACGVPVDLSKC-KTGAPAPSHGSP--APSHGAPSLPA 125

Query: 132 LTGFTSLLLFVASLILY 148
           + GFT LLLF  SL+ Y
Sbjct: 126 VGGFTFLLLFFVSLVFY 139

[Close]

BLAST of Lcy11g017870 vs. ExPASy TrEMBL
Match: A0A6J1HJR7 (non-specific lipid transfer protein-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111465138 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.1e-42
Identity = 102/145 (70.34%), Postives = 108/145 (74.48%), Query Frame = 0


Query: 3   MARSEISVAVAVVAVVVVVVTAAFVEAQVPDCASKLAGCAEFLKSDNPPATCCDPIKQAV 62
           MA S +SV V  VAV VVVVT  FVEAQ PDCASKLA CA FLKS+NPPATCC+PIK+AV
Sbjct: 1   MAGSLVSVVVVAVAVAVVVVTVGFVEAQQPDCASKLADCANFLKSNNPPATCCNPIKEAV 60

Query: 63  TTQLDCLCNLYTSPDFLPSIGVNVSDALHLTKACGVPVDLSKCSKTSAPAPQQGSPPAVP 122
            TQLDCLCNLYTSPDF  SIGVNVSDALHLTKACGV  DLSKC KT APAP  G+P    
Sbjct: 61  ATQLDCLCNLYTSPDFFSSIGVNVSDALHLTKACGVTTDLSKC-KTGAPAPSHGAPSLPA 120

Query: 123 GNDAEKLALTGFTSLLLFVASLILY 148
           G         GFT LLLF  SL+ Y
Sbjct: 121 G--------VGFTLLLLFFVSLVFY 136

[Close]

BLAST of Lcy11g017870 vs. NCBI nr
Match: XP_038876834.1 (non-specific lipid transfer protein GPI-anchored 8 [Benincasa hispida])

HSP 1 Score: 227.3 bits (578), Expect = 8.9e-56
Identity = 120/147 (81.63%), Postives = 133/147 (90.48%), Query Frame = 0


Query: 3   MARSEISVAVAVVAVVVVVVTAAFVEAQVPDCASKLAGCAEFLKSDNPPATCCDPIKQAV 62
           MARSE+SVAVAVVAVVVV+V  +FVEAQ+PDCASKL  CA+FLKS+NPPATCCDPIK+AV
Sbjct: 1   MARSEVSVAVAVVAVVVVLVAVSFVEAQLPDCASKLVPCADFLKSNNPPATCCDPIKEAV 60

Query: 63  TTQLDCLCNLYTSPDFLPSIGVNVSDALHLTKACGVPVDLSKCSKTSAPAPQQG--SPPA 122
            TQL+CLCNLY+SPDFL SIGVNVSDALHLTKACGVPV+LSKC KT APAPQQG  SPPA
Sbjct: 61  ATQLECLCNLYSSPDFLSSIGVNVSDALHLTKACGVPVELSKC-KTGAPAPQQGAPSPPA 120

Query: 123 VPGNDAEKLALTGFTSLLLFVASLILY 148
           VPGNDAEKL  TGFTS+LLF+A L+ Y
Sbjct: 121 VPGNDAEKLVSTGFTSMLLFLAPLVFY 146

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BLAST of Lcy11g017870 vs. NCBI nr
Match: XP_004147939.1 (lipid transfer-like protein VAS [Cucumis sativus] >KGN55906.1 hypothetical protein Csa_011723 [Cucumis sativus])

HSP 1 Score: 198.7 bits (504), Expect = 3.4e-47
Identity = 108/148 (72.97%), Postives = 121/148 (81.76%), Query Frame = 0


Query: 3   MARSEISVAVAVVAVVVVVVTAAFVEAQ-VPDCASKLAGCAEFLKSDNPPATCCDPIKQA 62
           MAR EISV V++VAVVV+VV  AF+EAQ VPDC SKL  C +FLKS+NPPATCCDPIK+A
Sbjct: 1   MARGEISVPVSLVAVVVLVVAVAFLEAQEVPDCVSKLTSCVDFLKSNNPPATCCDPIKEA 60

Query: 63  VTTQLDCLCNLYTSPDFLPSIGVNVSDALHLTKACGVPVDLSKCSKTSAPAPQQG--SPP 122
           V TQL CLCNLYT+P  L S GVNV+DA+HLT ACGVPV+LSKC KT APAPQQG  SPP
Sbjct: 61  VATQLPCLCNLYTTPGLLNSFGVNVTDAIHLTNACGVPVELSKC-KTGAPAPQQGGPSPP 120

Query: 123 AVPGNDAEKLALTGFTSLLLFVASLILY 148
            VPGN AEK  LTG TSLL+F+ASL  Y
Sbjct: 121 GVPGNHAEKFGLTGITSLLVFLASLAFY 147

[Close]

BLAST of Lcy11g017870 vs. NCBI nr
Match: TYK19484.1 (non-specific lipid-transfer protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 194.9 bits (494), Expect = 4.9e-46
Identity = 109/149 (73.15%), Postives = 120/149 (80.54%), Query Frame = 0


Query: 3   MARSEISVAVAVVAVVVVVVTAAFVEAQ-VPDCASKLAGCAEFLKSDNPPATCCDPIKQA 62
           MAR EISV  AVVAVVV+VV   FVEAQ VPDC SKL  C +FLKS+NPPATCCDPIK+A
Sbjct: 1   MARGEISVPFAVVAVVVLVVAVGFVEAQDVPDCVSKLTPCVDFLKSNNPPATCCDPIKEA 60

Query: 63  VTTQLDCLCNLYTSPDFLPSIGVNVSDALHLTKACGVPVDLSKCSKTSAPAPQQG--SPP 122
           V TQL CLCNLY +P  L S GVNVSDA+HLT ACGVPV+LSKC KT APAPQQG  SPP
Sbjct: 61  VATQLPCLCNLYVTPGLLNSFGVNVSDAIHLTNACGVPVELSKC-KTGAPAPQQGAPSPP 120

Query: 123 AVPGNDAEKLALTGFTSL-LLFVASLILY 148
            VPGNDA+K   TG TSL LLF+ASL++Y
Sbjct: 121 GVPGNDAQKFGSTGITSLVLLFLASLVVY 148

[Close]

BLAST of Lcy11g017870 vs. NCBI nr
Match: KAG7015653.1 (hypothetical protein SDJN02_23290 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 191.8 bits (486), Expect = 4.1e-45
Identity = 108/146 (73.97%), Postives = 115/146 (78.77%), Query Frame = 0


Query: 3   MARSEISVAVAVVAVVVVVVTAAFVEAQVPDCASKLAGCAEFLKSDNPPATCCDPIKQAV 62
           MA S +SV    VAVVVVVV   FVEAQ PDCASKLA CAEFLKS+NPPATCC+PIK+AV
Sbjct: 1   MAGSLVSVVAVAVAVVVVVVAVGFVEAQQPDCASKLATCAEFLKSNNPPATCCNPIKEAV 60

Query: 63  TTQLDCLCNLYTSPDFLPSIGVNVSDALHLTKACGVPVDLSKCSKTSAPAPQQGSPPAVP 122
            TQLDCLCNLYTSPDF  SIGVNVSDALHLTKACGVPVDLSKC KT APAP  GSP   P
Sbjct: 61  ATQLDCLCNLYTSPDFFSSIGVNVSDALHLTKACGVPVDLSKC-KTGAPAPSHGSP--AP 120

Query: 123 GNDAEKL-ALTGFTSLLLFVASLILY 148
            + A  L A+ GFT LLLF  SL+ Y
Sbjct: 121 SHGAPSLPAVGGFTFLLLFFVSLVFY 143

[Close]

BLAST of Lcy11g017870 vs. NCBI nr
Match: XP_008448898.1 (PREDICTED: non-specific lipid-transfer protein 1 [Cucumis melo])

HSP 1 Score: 190.7 bits (483), Expect = 9.2e-45
Identity = 107/149 (71.81%), Postives = 118/149 (79.19%), Query Frame = 0


Query: 3   MARSEISVAVAVVAVVVVVVTAAFVEAQ-VPDCASKLAGCAEFLKSDNPPATCCDPIKQA 62
           MA  EISV  AVVAVVV+ V   FVEAQ VPDC SKL  C +FLKS+NPPATCCDPIK+A
Sbjct: 1   MAGGEISVPFAVVAVVVLAVAVGFVEAQDVPDCVSKLTPCVDFLKSNNPPATCCDPIKEA 60

Query: 63  VTTQLDCLCNLYTSPDFLPSIGVNVSDALHLTKACGVPVDLSKCSKTSAPAPQQG--SPP 122
           V TQL CLCNLY +P  L S GVNVSDA+HLT ACGVPV+LSKC KT APAPQQG  SPP
Sbjct: 61  VATQLPCLCNLYVTPGLLNSFGVNVSDAIHLTNACGVPVELSKC-KTGAPAPQQGAPSPP 120

Query: 123 AVPGNDAEKLALTGFTSL-LLFVASLILY 148
            VPGNDA+K   TG TSL LLF+ASL++Y
Sbjct: 121 GVPGNDAQKFGSTGITSLVLLFLASLVVY 148

[Close]

BLAST of Lcy11g017870 vs. TAIR 10
Match: AT1G62790.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 83.2 bits (204), Expect = 1.9e-16
Identity = 56/152 (36.84%), Postives = 80/152 (52.63%), Query Frame = 0


Query: 3   MARSEISVAVAVVAVVVVVVTAAFVEAQVPDCASKLAGCAEFLKSDNPPA-TCCDPIKQA 62
           M ++ +  A A+  + +++V    +EAQ  +C SKL  C   L +   P   CCD IK+A
Sbjct: 1   MTKTMMIFAAAMTVMALLLVPT--IEAQT-ECVSKLVPCFNDLNTTTTPVKECCDSIKEA 60

Query: 63  VTTQLDCLCNLYTSPDFLPSIGVNVSDALHLTKACGVPVDLSKCSKTSAPAPQQGSPPAV 122
           V  +L CLC +YTSP  L    V    AL L++ C V  DLS C+   AP+P+   PP  
Sbjct: 61  VEKELTCLCTIYTSPGLLAQFNVTTEKALGLSRRCNVTTDLSACTAKGAPSPKASLPPPA 120

Query: 123 PGND------AEKLALTGFTSLLLFVASLILY 148
           PGN         KLA  G T+++L + S I +
Sbjct: 121 PGNTKKDAGAGNKLAGYGVTTVILSLISSIFF 149

[Close]

BLAST of Lcy11g017870 vs. TAIR 10
Match: AT1G62790.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 79.3 bits (194), Expect = 2.8e-15
Identity = 54/153 (35.29%), Postives = 80/153 (52.29%), Query Frame = 0


Query: 3   MARSEISVAVAVVAVVVVVVTAAFVEAQVPDCASKLAGCAEFLKSDNPPA-TCCDPIKQA 62
           M ++ +  A A+  + +++V    +EAQ  +C SKL  C   L +   P   CCD IK+A
Sbjct: 1   MTKTMMIFAAAMTVMALLLVPT--IEAQT-ECVSKLVPCFNDLNTTTTPVKECCDSIKEA 60

Query: 63  VTTQLDCLCNLYTSPDFLPSIGVNVSDALHLTKACGVPVDLSKCSKTSAPAPQQGSPPAV 122
           V  +L CLC +YTSP  L    V    AL L++ C V  DLS C+   AP+P+   PP  
Sbjct: 61  VEKELTCLCTIYTSPGLLAQFNVTTEKALGLSRRCNVTTDLSACTAKGAPSPKASLPPPA 120

Query: 123 PGNDAE-------KLALTGFTSLLLFVASLILY 148
           P  + +       KLA  G T+++L + S I +
Sbjct: 121 PAGNTKKDAGAGNKLAGYGVTTVILSLISSIFF 150

[Close]

BLAST of Lcy11g017870 vs. TAIR 10
Match: AT1G73560.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 73.6 bits (179), Expect = 1.5e-13
Identity = 51/140 (36.43%), Postives = 76/140 (54.29%), Query Frame = 0


Query: 8   ISVAVAVVAVVVVVVTAAFVEAQVPDCASKLAGCAEFLKSDN--PPATCCDPIKQAVTTQ 67
           ++V VAVV +  V  TA     Q+  C  KL  C  ++ S N  PP +CC P+K+ V   
Sbjct: 7   LAVVVAVVVLYSVEATAQGGNPQLTACLQKLLPCQPYIHSLNPPPPPSCCGPMKEIVEKD 66

Query: 68  LDCLCNLYTSPDFLPSIGVNVSDALHLTKACGVPVDLSKCSKTSAPAPQQGSPPAVPG-N 127
             CLC  + +P+ L ++ +   +AL L KACGV  D+S CSK + P+P   SP +  G +
Sbjct: 67  APCLCIAFNNPEVLKALNLTKENALLLPKACGVNPDVSLCSKIATPSP-IASPGSTNGTS 126

Query: 128 DAEKLALTGFTSLLLFVASL 145
            A  ++   F+ L  FVA +
Sbjct: 127 SASTISFNRFSFLSAFVAMI 145

[Close]

BLAST of Lcy11g017870 vs. TAIR 10
Match: AT4G12360.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 67.0 bits (162), Expect = 1.4e-11
Identity = 43/122 (35.25%), Postives = 63/122 (51.64%), Query Frame = 0


Query: 33  DCASKLAGCAEFLKSDNPPA-TCCDPIKQAVTTQLDCLCNLYTSPDFLPSIGVNVSDALH 92
           +CA+ LA C   +    PP+  CC  ++ A+TTQL CLC    SP  L    V   +AL 
Sbjct: 41  NCAAGLAVCLPAITQRGPPSQECCTAVETALTTQLSCLCGFIKSPMLLIPFNVTDFNAL- 100

Query: 93  LTKACGVPVDLSKCSKTSAPAPQQGSPPAVPG------NDAEKLALTGFTSLLLFVASLI 148
            +K CG+  D + CS+T+A AP   +   VPG      + A KLA TG   +++   + +
Sbjct: 101 FSKTCGLTTDPNLCSETAAQAPLPKTAAPVPGAPKSDKDAASKLAGTGLVGIVVITIAAM 160

[Close]

BLAST of Lcy11g017870 vs. TAIR 10
Match: AT1G18280.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 63.9 bits (154), Expect = 1.2e-10
Identity = 48/138 (34.78%), Postives = 64/138 (46.38%), Query Frame = 0


Query: 8   ISVAVAVVAVVVVVVTA-----------AFVEAQVPDCASKLAGCAEFLK-SDNPPATCC 67
           +  AVAVV V   V ++           A  +A    C  KL  C  +L  +  PPATCC
Sbjct: 4   VRFAVAVVLVFCYVTSSNAQMTSPPSGGAGGDAHSLPCIQKLMPCQPYLHLATPPPATCC 63

Query: 68  DPIKQAVTTQLDCLCNLYTSPDFLPSIGVNVSDALHLTKACGVPVDLSKCSKTSAPAPQQ 127
            P+ + V     CLC ++ + D L S+ +   +AL L KACG   D+S C KTSA     
Sbjct: 64  MPLNEIVAKDATCLCAVFNNVDMLKSLNLTKENALDLPKACGAKADVSLC-KTSAGTNSS 123

Query: 128 GSPPAVPGNDAEKLALTG 134
            +PPA P         TG
Sbjct: 124 STPPATPKTPPASSTSTG 140

The following BLAST results are available for this feature:

BLAST of Lcy11g017870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NLF7	3.9e-14	35.29	Non-specific lipid transfer protein GPI-anchored 7 OS=Arabidopsis thaliana OX=37...	[more]
Q1PFD8	2.2e-12	36.43	Non-specific lipid transfer protein GPI-anchored 9 OS=Arabidopsis thaliana OX=37...	[more]
Q9STH5	2.0e-10	35.25	Non-specific lipid transfer protein GPI-anchored 24 OS=Arabidopsis thaliana OX=3...	[more]
Q9LE56	1.7e-09	34.78	Non-specific lipid transfer protein GPI-anchored 3 OS=Arabidopsis thaliana OX=37...	[more]
B3H587	5.5e-08	30.82	Non-specific lipid transfer protein GPI-anchored 8 OS=Arabidopsis thaliana OX=37...	[more]

BLAST of Lcy11g017870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L702	1.6e-47	72.97	AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G035840 PE=4 SV...	[more]
A0A5D3D7F6	2.4e-46	73.15	Non-specific lipid-transfer protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3BK67	4.5e-45	71.81	non-specific lipid-transfer protein 1 OS=Cucumis melo OX=3656 GN=LOC103490924 PE...	[more]
A0A6J1EBU7	5.8e-45	76.64	non-specific lipid transfer protein-like 1 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1HJR7	2.1e-42	70.34	non-specific lipid transfer protein-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of Lcy11g017870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876834.1	8.9e-56	81.63	non-specific lipid transfer protein GPI-anchored 8 [Benincasa hispida]	[more]
XP_004147939.1	3.4e-47	72.97	lipid transfer-like protein VAS [Cucumis sativus] >KGN55906.1 hypothetical prote...	[more]
TYK19484.1	4.9e-46	73.15	non-specific lipid-transfer protein 1 [Cucumis melo var. makuwa]	[more]
KAG7015653.1	4.1e-45	73.97	hypothetical protein SDJN02_23290 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_008448898.1	9.2e-45	71.81	PREDICTED: non-specific lipid-transfer protein 1 [Cucumis melo]	[more]

BLAST of Lcy11g017870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G62790.2	1.9e-16	36.84	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G62790.1	2.8e-15	35.29	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G73560.1	1.5e-13	36.43	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT4G12360.1	1.4e-11	35.25	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G18280.1	1.2e-10	34.78	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 18..105 e-value: 1.2E-15 score: 57.4
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 32..111 e-value: 6.5E-12 score: 47.2
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 33..108
IPR043325	Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein	PANTHER	PTHR33044	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED	coord: 10..143
None	No IPR available	PANTHER	PTHR33044:SF37	OS10G0191100 PROTEIN	coord: 10..143
None	No IPR available	CDD	cd00010	AAI_LTSS	coord: 38..98 e-value: 1.87729E-11 score: 54.3551

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g017870.1	Lcy11g017870.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0031225	anchored component of membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane