Lcy11g017690 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g017690
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	protein UPSTREAM OF FLC-like
Location	Chr11: 43707451 .. 43710006 (+)
RNA-Seq Expression	Lcy11g017690
Synteny	Lcy11g017690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACCTCTCAAGCCGTCTCGTTCCTTTAGGGAGGACGGGGTTAGTAAAATATTGTAGTTTGTGATATTGTCCCTTGAAGGGACAAATTAAGATCTCATATTATAAAATCAAAAGTTGTTGGTATGTATATGTATTATGATTTCATTTAGTTTGAAATCTTAACTACATTTTGGAAATTAAAAAATAGTTTTGATAGAACATTTGTTTAATTTTAAATGCATTTTTTAAGAAATATCAAACAAAAATTAAAACAATTACGAAAAGTTTGTCCAACTTGCTAAAATATCAAAGATTTTATCCCATGATATGATATTGTTTTCTTTTTATGACAATCCACGCCCATTGTCAAGAAGAAGAAATTAAATAACGTTTTCTACTAGATATAAAAAATATTTTTAGTTCCTAAACTTTCATACAAGTAATAACTTAGGCCCCGTTTGATAACATTTGGTTTTTGGTTTTTAGTTTTTGAAAAATAAGCTTATACACACATATTTTCCTCTATAAGTTTCTTTGTCTTAGTATCTACCTTCTTCTATGTTTTCAAAAACCAAACCAAATTTTGAAAACAAAAAAAAGTAGTTTCCAAAAACTTGTTTTTGTTTTTAGAATTTGGCTAGGAATTCAAATAGATCCCTAACAAATATGAAAACCATTGTAGGGAATTTGGGAGAAAACAAGCATAAATTTCAAAAATAAAAAACAAAAAACGAAATAGTTATCAAACGGGGCCTTGGTTTTTGGTTTTTGGTTTTTGAAAATTAAGTTTATACACACATACTTTCACCTATAAGTTTCTTGGTTTTAATATCAATCTTCTACCTTGTTTCCAAAAACCAAGTCCAATTTTGGAAACAAAAAAAAGTAGTTTTCAAAAACTTGTTTTTGTTTTTAAAATTTGACTAGGAATTCAAATACAACCTTAACTAGGATGAAAGTCATGGTAGGAAATTTAGGAGAAAACAAGCATAATTTTCAAAAACCAAATGGTTATCAAACGGGGTCTTAATCTTTTGCGGTTCATAAGCGTAGGTGGTGTCTAATTAATTAGTTTATCAATCTACCTAGGTAAGAAATTTCATTGAATCACAACAATATTTTTTACAATAGGGATTAAAATGTTATAGATTTTAAAGTGCATAGACTAAATTGTTACATATTAAAGTTTAGAGATTAAATTGTTACAAAATTGAAAGTAAAGAGGCTAAATTTTTACAAATTAAAGTTTAGAGATAGAGACTAAATTGTTACTTCCATGAAAGTTCAAATAGTAAAATGTTTTCCAATTTTTTTCTTCTAAATATAAATTTCAATGGTTGTTGGTTTAACTAAGTCCCTAAGGGCCTGTTTGATAACGTTCTCGTTTCTTGTTTCTTGTTTCTTGTTTTTTAAGAACTAAAAACAGAACATGATTGATAACTATTTCTATTTCTTGCTTCTCTAAAAAAAACAGAAACAAAAATGTGTTTGATAATTGTTTCTTATTTCTTTGGGTAAAATACATTTTTGGTCTCTCATGTTTTGAGTCAGTTTCTAATAGGTTCCTACGTTTCAAAATTGGACAATCAAGTCCCTATTGTTCCGGAAATGTTTCTATTGAGTCCCTCTAGGGCTGACGTGGCAATTTAAAATAATAAAATATTGATTTTTTTATTAAAATAATAATAATAATATTATTATTATTAAAATATAATAATAATAAAATAATAAAATAATTATTATTATTAAAAAAAACTCCTTTCTCCTCTTTCCCCACCTTCCATCTCTTCTTCTCCCCGCCGCCCCCACCTTCTCTCTCTTTTTCTCCCCACCGTCGGAGAGAGGCTAAAGTCGCGGCGGTGGATGCTTCGATTCAGACCGACGAGAAGCACCGGCGGAGGAGACGAGTGGCGAGGGGAGAAGAGAAGGGAGAGAAGGAAATAGAGGAGGTTCATGGTGAATCAAACCCTACGTCGAGTACAGAGCTCAGTAGAGAAGAAATTTCTCCTCCGTCGTCGGATTCGAGCCCCGAAACTCTCGAATCTCTGATGAAAGCCGACGGACGTTTGATCATTTTGGAAGCTGCAAACGCGAATCGGACGGTGGAGAGTTTTTCGAGCGGGAGGATGAAGGCCTCAGCCGTTCTGATGCAATTGATTTCATGTGGATCGATCTCGTTCAAGGACTGTGGAGCAACATCAATGGAGGATCAAGAATTTGGCCTCGTTGGTTCCTGTAAATCCAGAGCGCCTTGTGGAGGTGGGAAAGAAGGGCCGGGACATCGACGAAAACGGGGAGGAGCTCCGGCAGCGGGGAGAAAAAGAGAGGGAAGGTGGGGGCGGCGGGGGGAAGAAGAGAGGGAAGATGGGGAAAGAGGAGAGAGAGAAGTTTTTTTTAATAATAATAATGATTTATTTATTTTTATTTTTATTATTATTATATTTTAATAATAATAATTTTTATTTATTTATTTTATTATATTTTAATAATAATTTTTATTTTATTATTATTTTAATTAAAAATTAATATTTTATTATTTTAAATTGCTACGTTAGCTCTAAAGGGACTCAGTAG

mRNA sequence

ATGGAACCTCTCAAGCCGTCTCGTTCCTTTAGGGAGGACGGGACCGACGAGAAGCACCGGCGGAGGAGACGAGTGGCGAGGGGAGAAGAGAAGGGAGAGAAGGAAATAGAGGAGGTTCATGGTGAATCAAACCCTACGTCGAGTACAGAGCTCAGTAGAGAAGAAATTTCTCCTCCGTCGTCGGATTCGAGCCCCGAAACTCTCGAATCTCTGATGAAAGCCGACGGACGTTTGATCATTTTGGAAGCTGCAAACGCGAATCGGACGGTGGAGAGTTTTTCGAGCGGGAGGATGAAGGCCTCAGCCGTTCTGATGCAATTGATTTCATGTGGATCGATCTCGTTCAAGGACTGTGGAGCAACATCAATGGAGGATCAAGAATTTGGCCTCGTTGGTTCCTGTAAATCCAGAGCGCCTTGTGGAGGTGGGAAAGAAGGGCCGGGACATCGACGAAAACGGGGAGGAGCTCCGGCAGCGGGGAGAAAAAGAGAGGGAAGCTCTAAAGGGACTCAGTAG

Coding sequence (CDS)

ATGGAACCTCTCAAGCCGTCTCGTTCCTTTAGGGAGGACGGGACCGACGAGAAGCACCGGCGGAGGAGACGAGTGGCGAGGGGAGAAGAGAAGGGAGAGAAGGAAATAGAGGAGGTTCATGGTGAATCAAACCCTACGTCGAGTACAGAGCTCAGTAGAGAAGAAATTTCTCCTCCGTCGTCGGATTCGAGCCCCGAAACTCTCGAATCTCTGATGAAAGCCGACGGACGTTTGATCATTTTGGAAGCTGCAAACGCGAATCGGACGGTGGAGAGTTTTTCGAGCGGGAGGATGAAGGCCTCAGCCGTTCTGATGCAATTGATTTCATGTGGATCGATCTCGTTCAAGGACTGTGGAGCAACATCAATGGAGGATCAAGAATTTGGCCTCGTTGGTTCCTGTAAATCCAGAGCGCCTTGTGGAGGTGGGAAAGAAGGGCCGGGACATCGACGAAAACGGGGAGGAGCTCCGGCAGCGGGGAGAAAAAGAGAGGGAAGCTCTAAAGGGACTCAGTAG

Protein sequence

MEPLKPSRSFREDGTDEKHRRRRRVARGEEKGEKEIEEVHGESNPTSSTELSREEISPPSSDSSPETLESLMKADGRLIILEAANANRTVESFSSGRMKASAVLMQLISCGSISFKDCGATSMEDQEFGLVGSCKSRAPCGGGKEGPGHRRKRGGAPAAGRKREGSSKGTQ

Homology

[Close]

BLAST of Lcy11g017690 vs. ExPASy Swiss-Prot
Match: Q9FJF5 (Protein SOSEKI 5 OS=Arabidopsis thaliana OX=3702 GN=SOK5 PE=1 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 8.3e-24
Identity = 77/140 (55.00%), Postives = 95/140 (67.86%), Query Frame = 0


Query: 15  TDEKHRRRRRVARGEEKGEKEIEEVHG-ESNPTSSTELSREEISPPSSDSSPETLESLMK 74
           TD++ RRRR         ++EIEEV    S    STELSR+EISPP SDSSPETLE+L+K
Sbjct: 212 TDDRRRRRR-------PAKEEIEEVKSPASYENQSTELSRDEISPPPSDSSPETLENLIK 271

Query: 75  ADGRLII--LEAANANRTVESFSSGRMKASAVLMQLISCGSISFKDCGATSMEDQEFGLV 134
           ADGRLI+   E++  +RTVES SSGRM+ASAVLMQLISCG++SFK+CG   ++DQ   L 
Sbjct: 272 ADGRLILRPSESSTDHRTVESLSSGRMRASAVLMQLISCGTMSFKECGPVLLKDQGLALN 331

Query: 135 GSCKSRAPCGGGKEGPGHRR 152
           G  +S      G E  G  R
Sbjct: 332 G--RSGCTITRGAEDNGEER 342

[Close]

BLAST of Lcy11g017690 vs. ExPASy Swiss-Prot
Match: Q8GY65 (Protein SOSEKI 4 OS=Arabidopsis thaliana OX=3702 GN=SOK4 PE=1 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 4.9e-16
Identity = 68/131 (51.91%), Postives = 80/131 (61.07%), Query Frame = 0


Query: 15  TDEKHRRRRRVARGEEKGEKEIEEVHGESNPTSSTELSREEI-SPPSSDSSPETLESLMK 74
           TD++ RR+  V         E+ EV         TELSREEI SPP SDSSPETLESLM+
Sbjct: 158 TDDRRRRKSPV--------DEVNEV---------TELSREEITSPPQSDSSPETLESLMR 217

Query: 75  ADGRLIIL-EAANANRTVESFSSGRMKASAVLMQLISCGSISFKDCGATSMEDQEFGLVG 134
           ADGRLI+L E    NRTVE     +M+ SAVLMQLISCG++SFK CG T M        G
Sbjct: 218 ADGRLILLQEDQELNRTVE-----KMRPSAVLMQLISCGAMSFKKCGPTLMN-------G 259

Query: 135 SCKSRAPCGGG 144
           + +S A  G G
Sbjct: 278 NTRSTAVRGTG 259

[Close]

BLAST of Lcy11g017690 vs. ExPASy Swiss-Prot
Match: Q8GYT8 (Protein SOSEKI 3 OS=Arabidopsis thaliana OX=3702 GN=SOK3 PE=1 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 3.3e-04
Identity = 39/108 (36.11%), Postives = 54/108 (50.00%), Query Frame = 0


Query: 36  IEEVHGESNPTSSTELSREEISPPSSDSS------PETLESLMKADGRLIILEAANANRT 95
           + E         S E+SR  +SPP S+S+       +TLESL++AD   +          
Sbjct: 262 VSEASCAGKERESAEISRNSVSPPFSNSASSLGGKTDTLESLIRADVSKMNSFRILEQED 321

Query: 96  VESFSSGRMKASAVLMQLISCGSISFKDCGATSMEDQEFGLVGSCKSR 138
           V   +  R++AS +LMQLISCGSIS K        D  FGLV + K +
Sbjct: 322 VRMPAIPRLRASNMLMQLISCGSISVK--------DNNFGLVPTYKPK 361

[Close]

BLAST of Lcy11g017690 vs. ExPASy TrEMBL
Match: A0A6J1K8T0 (protein UPSTREAM OF FLC-like OS=Cucurbita maxima OX=3661 GN=LOC111493311 PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.8e-45
Identity = 111/134 (82.84%), Postives = 111/134 (82.84%), Query Frame = 0


Query: 15  TDEKHRRRRRVARGEEKGEKEIEEVHGESNPTSSTELSREEISPPSSDSSPETLESLMKA 74
           TDEKHRRRRRV   EEK EKE EEVHGESN T STELSREEISPP SD SPETLESLMKA
Sbjct: 206 TDEKHRRRRRVGSEEEKEEKETEEVHGESNSTPSTELSREEISPPPSDYSPETLESLMKA 265

Query: 75  DGRLIILEAANANRTVESFSSGRMKASAVLMQLISCGSISFKDCGATSMEDQEFGLVGSC 134
           DGRLII EA N NRT ESF SGRMKASAVLMQLISCGSISFKDCGATSME QEF L   C
Sbjct: 266 DGRLIISEAVNTNRTTESFPSGRMKASAVLMQLISCGSISFKDCGATSMEGQEFSL---C 325

Query: 135 KSRAPCGGGKEGPG 149
           KSR P G GKEG G
Sbjct: 326 KSRVPRGDGKEGAG 336

[Close]

BLAST of Lcy11g017690 vs. ExPASy TrEMBL
Match: A0A6J1G949 (protein UPSTREAM OF FLC-like OS=Cucurbita moschata OX=3662 GN=LOC111452093 PE=3 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 5.2e-45
Identity = 110/134 (82.09%), Postives = 112/134 (83.58%), Query Frame = 0


Query: 15  TDEKHRRRRRVARGEEKGEKEIEEVHGESNPTSSTELSREEISPPSSDSSPETLESLMKA 74
           TDEKHRRRRRV R EEK EKE EEV+GESN T STELSREEISPP SD SPETLESLMKA
Sbjct: 206 TDEKHRRRRRVGREEEKEEKETEEVNGESNSTPSTELSREEISPPPSDYSPETLESLMKA 265

Query: 75  DGRLIILEAANANRTVESFSSGRMKASAVLMQLISCGSISFKDCGATSMEDQEFGLVGSC 134
           DGRLII EA N NRT ESF SGRMKASAVLMQLISCGSISFKDCGATSME QEF +   C
Sbjct: 266 DGRLIISEAVNTNRTTESFPSGRMKASAVLMQLISCGSISFKDCGATSMEGQEFSV---C 325

Query: 135 KSRAPCGGGKEGPG 149
           KSR P G GKEG G
Sbjct: 326 KSRVPRGDGKEGAG 336

[Close]

BLAST of Lcy11g017690 vs. ExPASy TrEMBL
Match: A0A6J1HPC6 (protein UPSTREAM OF FLC-like OS=Cucurbita moschata OX=3662 GN=LOC111464820 PE=3 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 6.3e-43
Identity = 106/132 (80.30%), Postives = 110/132 (83.33%), Query Frame = 0


Query: 15  TDEKHRRRRRVARGEE-KGEKEIEEVHGESNPTSSTELSREEISPPSSDSSPETLESLMK 74
           TDEKHRRRRR  R EE K EKE EEVHGESNPT STEL+ EEISPP SDSSPETLESLMK
Sbjct: 206 TDEKHRRRRRAVREEEKKEEKETEEVHGESNPTPSTELNTEEISPPLSDSSPETLESLMK 265

Query: 75  ADGRLIILEAANANRTVESFSSGRMKASAVLMQLISCGSISFKDCGATSMEDQEFGLVGS 134
           ADGRLII EAANANRT ESF SGRM+ASAVLMQLISCGS+SFKDC A S+ DQEF LVG 
Sbjct: 266 ADGRLIISEAANANRTAESFPSGRMRASAVLMQLISCGSMSFKDCAAPSIGDQEFALVGH 325

Query: 135 CKSRAPCGGGKE 146
           CKS  P  G KE
Sbjct: 326 CKSGVPRIGRKE 337

[Close]

BLAST of Lcy11g017690 vs. ExPASy TrEMBL
Match: A0A6J1HZ99 (protein UPSTREAM OF FLC-like OS=Cucurbita maxima OX=3661 GN=LOC111469459 PE=3 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 3.2e-42
Identity = 104/131 (79.39%), Postives = 108/131 (82.44%), Query Frame = 0


Query: 15  TDEKHRRRRRVARGEEKGEKEIEEVHGESNPTSSTELSREEISPPSSDSSPETLESLMKA 74
           TDEKHRRRRR  R E   +KE EEVHGESNPT STEL+ EEISPP SDSSPETLESLMKA
Sbjct: 206 TDEKHRRRRRAVREE---DKETEEVHGESNPTPSTELNTEEISPPLSDSSPETLESLMKA 265

Query: 75  DGRLIILEAANANRTVESFSSGRMKASAVLMQLISCGSISFKDCGATSMEDQEFGLVGSC 134
           DGRLII EA NANRT ESF SGRM+ASAVLMQLISCGS+SFKDC A SM DQEF LVG C
Sbjct: 266 DGRLIISEADNANRTAESFPSGRMRASAVLMQLISCGSMSFKDCAAPSMGDQEFALVGHC 325

Query: 135 KSRAPCGGGKE 146
           KSR P  G KE
Sbjct: 326 KSRVPRIGRKE 333

[Close]

BLAST of Lcy11g017690 vs. ExPASy TrEMBL
Match: A0A5A7SXA9 (Protein UPSTREAM OF FLC OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00810 PE=3 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 8.0e-38
Identity = 102/133 (76.69%), Postives = 108/133 (81.20%), Query Frame = 0


Query: 15  TDEKHRRRRRVARGEEKGEKEIEEVHGESNPTSSTELSREEISPPSSDSSPETLESLMKA 74
           T+EKHRRRRR  R E   EKE EEV    NPT+STELSREEISPP SDSSPETLESLMKA
Sbjct: 208 TEEKHRRRRRATREE---EKETEEV----NPTASTELSREEISPPPSDSSPETLESLMKA 267

Query: 75  DGRLIILEAANANR-TVESFSSGRMKASAVLMQLISCGSISFKDCGATSMEDQEFGLVGS 134
           DGRLII E A  NR T ESF SGRMKASAVLMQLISCGSISFKDCGATSM+DQE  +VG+
Sbjct: 268 DGRLIISEGAKPNRTTAESFPSGRMKASAVLMQLISCGSISFKDCGATSMDDQELAVVGT 327

Query: 135 CKSRAPCGGGKEG 147
           CKSR   GG +EG
Sbjct: 328 CKSR---GGKEEG 330

[Close]

BLAST of Lcy11g017690 vs. NCBI nr
Match: XP_023523042.1 (protein UPSTREAM OF FLC-like [Cucurbita pepo subsp. pepo] >XP_023523046.1 protein UPSTREAM OF FLC-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 193.7 bits (491), Expect = 1.3e-45
Identity = 112/134 (83.58%), Postives = 113/134 (84.33%), Query Frame = 0


Query: 15  TDEKHRRRRRVARGEEKGEKEIEEVHGESNPTSSTELSREEISPPSSDSSPETLESLMKA 74
           TDEKHRRRRRV R EEK EKEIEEV+GESN T STELSREEISPP SD SPETLESLMKA
Sbjct: 206 TDEKHRRRRRVGREEEKEEKEIEEVNGESNSTPSTELSREEISPPPSDYSPETLESLMKA 265

Query: 75  DGRLIILEAANANRTVESFSSGRMKASAVLMQLISCGSISFKDCGATSMEDQEFGLVGSC 134
           DGRLII EA N NRT ESF SGRMKASAVLMQLISCGSISFKDCGATSME QEF L   C
Sbjct: 266 DGRLIISEAVNTNRTTESFPSGRMKASAVLMQLISCGSISFKDCGATSMEGQEFSL---C 325

Query: 135 KSRAPCGGGKEGPG 149
           KSR P G GKEG G
Sbjct: 326 KSRVPRGDGKEGAG 336

[Close]

BLAST of Lcy11g017690 vs. NCBI nr
Match: XP_022998737.1 (protein UPSTREAM OF FLC-like [Cucurbita maxima])

HSP 1 Score: 192.2 bits (487), Expect = 3.7e-45
Identity = 111/134 (82.84%), Postives = 111/134 (82.84%), Query Frame = 0


Query: 15  TDEKHRRRRRVARGEEKGEKEIEEVHGESNPTSSTELSREEISPPSSDSSPETLESLMKA 74
           TDEKHRRRRRV   EEK EKE EEVHGESN T STELSREEISPP SD SPETLESLMKA
Sbjct: 206 TDEKHRRRRRVGSEEEKEEKETEEVHGESNSTPSTELSREEISPPPSDYSPETLESLMKA 265

Query: 75  DGRLIILEAANANRTVESFSSGRMKASAVLMQLISCGSISFKDCGATSMEDQEFGLVGSC 134
           DGRLII EA N NRT ESF SGRMKASAVLMQLISCGSISFKDCGATSME QEF L   C
Sbjct: 266 DGRLIISEAVNTNRTTESFPSGRMKASAVLMQLISCGSISFKDCGATSMEGQEFSL---C 325

Query: 135 KSRAPCGGGKEGPG 149
           KSR P G GKEG G
Sbjct: 326 KSRVPRGDGKEGAG 336

[Close]

BLAST of Lcy11g017690 vs. NCBI nr
Match: XP_022948402.1 (protein UPSTREAM OF FLC-like [Cucurbita moschata] >XP_022948403.1 protein UPSTREAM OF FLC-like [Cucurbita moschata] >KAG7036898.1 Protein UPSTREAM OF FLC [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 190.7 bits (483), Expect = 1.1e-44
Identity = 110/134 (82.09%), Postives = 112/134 (83.58%), Query Frame = 0


Query: 15  TDEKHRRRRRVARGEEKGEKEIEEVHGESNPTSSTELSREEISPPSSDSSPETLESLMKA 74
           TDEKHRRRRRV R EEK EKE EEV+GESN T STELSREEISPP SD SPETLESLMKA
Sbjct: 206 TDEKHRRRRRVGREEEKEEKETEEVNGESNSTPSTELSREEISPPPSDYSPETLESLMKA 265

Query: 75  DGRLIILEAANANRTVESFSSGRMKASAVLMQLISCGSISFKDCGATSMEDQEFGLVGSC 134
           DGRLII EA N NRT ESF SGRMKASAVLMQLISCGSISFKDCGATSME QEF +   C
Sbjct: 266 DGRLIISEAVNTNRTTESFPSGRMKASAVLMQLISCGSISFKDCGATSMEGQEFSV---C 325

Query: 135 KSRAPCGGGKEGPG 149
           KSR P G GKEG G
Sbjct: 326 KSRVPRGDGKEGAG 336

[Close]

BLAST of Lcy11g017690 vs. NCBI nr
Match: KAG6607213.1 (Protein UPSTREAM OF FLC, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 190.7 bits (483), Expect = 1.1e-44
Identity = 110/134 (82.09%), Postives = 112/134 (83.58%), Query Frame = 0


Query: 15  TDEKHRRRRRVARGEEKGEKEIEEVHGESNPTSSTELSREEISPPSSDSSPETLESLMKA 74
           TDEKHRRRRRV R EEK EKE EEV+GESN T STELSREEISPP SD SPETLESLMKA
Sbjct: 206 TDEKHRRRRRVGREEEKEEKETEEVNGESNSTPSTELSREEISPPPSDYSPETLESLMKA 265

Query: 75  DGRLIILEAANANRTVESFSSGRMKASAVLMQLISCGSISFKDCGATSMEDQEFGLVGSC 134
           DGRLII EA N NRT ESF SGRMKASAVLMQLISCGSISFKDCGATSME QEF +   C
Sbjct: 266 DGRLIISEAVNTNRTTESFPSGRMKASAVLMQLISCGSISFKDCGATSMEGQEFSV---C 325

Query: 135 KSRAPCGGGKEGPG 149
           KSR P G GKEG G
Sbjct: 326 KSRVPRGDGKEGAG 336

[Close]

BLAST of Lcy11g017690 vs. NCBI nr
Match: XP_023519054.1 (protein UPSTREAM OF FLC-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 186.4 bits (472), Expect = 2.0e-43
Identity = 107/132 (81.06%), Postives = 111/132 (84.09%), Query Frame = 0


Query: 15  TDEKHRRRRRVARGEEK-GEKEIEEVHGESNPTSSTELSREEISPPSSDSSPETLESLMK 74
           TDEKHRRRRR  R EEK  EKE EEVHGESNPT STEL+ EEISPP SDSSPETLESLMK
Sbjct: 206 TDEKHRRRRRAVREEEKEEEKETEEVHGESNPTPSTELNTEEISPPLSDSSPETLESLMK 265

Query: 75  ADGRLIILEAANANRTVESFSSGRMKASAVLMQLISCGSISFKDCGATSMEDQEFGLVGS 134
           ADGRLII EAANANRT ESF SGRM+ASAVLMQLISCGS+SFKDC A S+ DQEF LVG 
Sbjct: 266 ADGRLIISEAANANRTAESFPSGRMRASAVLMQLISCGSMSFKDCAAPSIGDQEFALVGH 325

Query: 135 CKSRAPCGGGKE 146
           CKSR P  G KE
Sbjct: 326 CKSRVPRIGRKE 337

[Close]

BLAST of Lcy11g017690 vs. TAIR 10
Match: AT5G59790.1 (Domain of unknown function (DUF966) )

HSP 1 Score: 111.7 bits (278), Expect = 5.9e-25
Identity = 77/140 (55.00%), Postives = 95/140 (67.86%), Query Frame = 0


Query: 15  TDEKHRRRRRVARGEEKGEKEIEEVHG-ESNPTSSTELSREEISPPSSDSSPETLESLMK 74
           TD++ RRRR         ++EIEEV    S    STELSR+EISPP SDSSPETLE+L+K
Sbjct: 212 TDDRRRRRR-------PAKEEIEEVKSPASYENQSTELSRDEISPPPSDSSPETLENLIK 271

Query: 75  ADGRLII--LEAANANRTVESFSSGRMKASAVLMQLISCGSISFKDCGATSMEDQEFGLV 134
           ADGRLI+   E++  +RTVES SSGRM+ASAVLMQLISCG++SFK+CG   ++DQ   L 
Sbjct: 272 ADGRLILRPSESSTDHRTVESLSSGRMRASAVLMQLISCGTMSFKECGPVLLKDQGLALN 331

Query: 135 GSCKSRAPCGGGKEGPGHRR 152
           G  +S      G E  G  R
Sbjct: 332 G--RSGCTITRGAEDNGEER 342

[Close]

BLAST of Lcy11g017690 vs. TAIR 10
Match: AT3G46110.2 (Domain of unknown function (DUF966) )

HSP 1 Score: 85.9 bits (211), Expect = 3.5e-17
Identity = 68/131 (51.91%), Postives = 80/131 (61.07%), Query Frame = 0


Query: 15  TDEKHRRRRRVARGEEKGEKEIEEVHGESNPTSSTELSREEI-SPPSSDSSPETLESLMK 74
           TD++ RR+  V         E+ EV         TELSREEI SPP SDSSPETLESLM+
Sbjct: 158 TDDRRRRKSPV--------DEVNEV---------TELSREEITSPPQSDSSPETLESLMR 217

Query: 75  ADGRLIIL-EAANANRTVESFSSGRMKASAVLMQLISCGSISFKDCGATSMEDQEFGLVG 134
           ADGRLI+L E    NRTVE     +M+ SAVLMQLISCG++SFK CG T M        G
Sbjct: 218 ADGRLILLQEDQELNRTVE-----KMRPSAVLMQLISCGAMSFKKCGPTLMN-------G 259

Query: 135 SCKSRAPCGGG 144
           + +S A  G G
Sbjct: 278 NTRSTAVRGTG 259

[Close]

BLAST of Lcy11g017690 vs. TAIR 10
Match: AT3G46110.1 (Domain of unknown function (DUF966) )

HSP 1 Score: 85.9 bits (211), Expect = 3.5e-17
Identity = 68/131 (51.91%), Postives = 80/131 (61.07%), Query Frame = 0


Query: 15  TDEKHRRRRRVARGEEKGEKEIEEVHGESNPTSSTELSREEI-SPPSSDSSPETLESLMK 74
           TD++ RR+  V         E+ EV         TELSREEI SPP SDSSPETLESLM+
Sbjct: 158 TDDRRRRKSPV--------DEVNEV---------TELSREEITSPPQSDSSPETLESLMR 217

Query: 75  ADGRLIIL-EAANANRTVESFSSGRMKASAVLMQLISCGSISFKDCGATSMEDQEFGLVG 134
           ADGRLI+L E    NRTVE     +M+ SAVLMQLISCG++SFK CG T M        G
Sbjct: 218 ADGRLILLQEDQELNRTVE-----KMRPSAVLMQLISCGAMSFKKCGPTLMN-------G 259

Query: 135 SCKSRAPCGGG 144
           + +S A  G G
Sbjct: 278 NTRSTAVRGTG 259

[Close]

BLAST of Lcy11g017690 vs. TAIR 10
Match: AT2G28150.1 (Domain of unknown function (DUF966) )

HSP 1 Score: 46.6 bits (109), Expect = 2.3e-05
Identity = 39/108 (36.11%), Postives = 54/108 (50.00%), Query Frame = 0


Query: 36  IEEVHGESNPTSSTELSREEISPPSSDSS------PETLESLMKADGRLIILEAANANRT 95
           + E         S E+SR  +SPP S+S+       +TLESL++AD   +          
Sbjct: 262 VSEASCAGKERESAEISRNSVSPPFSNSASSLGGKTDTLESLIRADVSKMNSFRILEQED 321

Query: 96  VESFSSGRMKASAVLMQLISCGSISFKDCGATSMEDQEFGLVGSCKSR 138
           V   +  R++AS +LMQLISCGSIS K        D  FGLV + K +
Sbjct: 322 VRMPAIPRLRASNMLMQLISCGSISVK--------DNNFGLVPTYKPK 361

The following BLAST results are available for this feature:

BLAST of Lcy11g017690 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJF5	8.3e-24	55.00	Protein SOSEKI 5 OS=Arabidopsis thaliana OX=3702 GN=SOK5 PE=1 SV=1	[more]
Q8GY65	4.9e-16	51.91	Protein SOSEKI 4 OS=Arabidopsis thaliana OX=3702 GN=SOK4 PE=1 SV=1	[more]
Q8GYT8	3.3e-04	36.11	Protein SOSEKI 3 OS=Arabidopsis thaliana OX=3702 GN=SOK3 PE=1 SV=1	[more]

BLAST of Lcy11g017690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K8T0	1.8e-45	82.84	protein UPSTREAM OF FLC-like OS=Cucurbita maxima OX=3661 GN=LOC111493311 PE=3 SV...	[more]
A0A6J1G949	5.2e-45	82.09	protein UPSTREAM OF FLC-like OS=Cucurbita moschata OX=3662 GN=LOC111452093 PE=3 ...	[more]
A0A6J1HPC6	6.3e-43	80.30	protein UPSTREAM OF FLC-like OS=Cucurbita moschata OX=3662 GN=LOC111464820 PE=3 ...	[more]
A0A6J1HZ99	3.2e-42	79.39	protein UPSTREAM OF FLC-like OS=Cucurbita maxima OX=3661 GN=LOC111469459 PE=3 SV...	[more]
A0A5A7SXA9	8.0e-38	76.69	Protein UPSTREAM OF FLC OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Lcy11g017690 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023523042.1	1.3e-45	83.58	protein UPSTREAM OF FLC-like [Cucurbita pepo subsp. pepo] >XP_023523046.1 protei...	[more]
XP_022998737.1	3.7e-45	82.84	protein UPSTREAM OF FLC-like [Cucurbita maxima]	[more]
XP_022948402.1	1.1e-44	82.09	protein UPSTREAM OF FLC-like [Cucurbita moschata] >XP_022948403.1 protein UPSTRE...	[more]
KAG6607213.1	1.1e-44	82.09	Protein UPSTREAM OF FLC, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023519054.1	2.0e-43	81.06	protein UPSTREAM OF FLC-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lcy11g017690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59790.1	5.9e-25	55.00	Domain of unknown function (DUF966)	[more]
AT3G46110.2	3.5e-17	51.91	Domain of unknown function (DUF966)	[more]
AT3G46110.1	3.5e-17	51.91	Domain of unknown function (DUF966)	[more]
AT2G28150.1	2.3e-05	36.11	Domain of unknown function (DUF966)	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010369	Protein SOSEKI	PFAM	PF06136	DUF966	coord: 15..144 e-value: 2.2E-23 score: 83.6
IPR010369	Protein SOSEKI	PANTHER	PTHR31083	UPSTREAM OF FLC PROTEIN (DUF966)	coord: 14..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..68
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..171
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..71
None	No IPR available	PANTHER	PTHR31083:SF30	BNAANNG21550D PROTEIN	coord: 14..143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g017690.1	Lcy11g017690.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051258	protein polymerization
biological_process	GO:0051302	regulation of cell division
biological_process	GO:2000067	regulation of root morphogenesis
biological_process	GO:0090708	specification of plant organ axis polarity
cellular_component	GO:0031234	extrinsic component of cytoplasmic side of plasma membrane