Lcy11g017520 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g017520
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	glycine-rich protein
Location	Chr11: 43451936 .. 43453824 (-)
RNA-Seq Expression	Lcy11g017520
Synteny	Lcy11g017520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGAGAAAAGCGAAGATGGCCCGACCTGACCCGGTTCGGGTCATTTTGAACTGGGTTGGGTCGGGTCGGTTTGTCCGTACAACCGACCTGAACCGGAAATTCAAACCGACCCGAACCGGAAATTTTACACCCCTAATCAATAGGAATTTAAGTTCAAATCATGGAGCATTATTTTCCTAATGTTAAAGGATTAGAATTGCACTTATTCTGCCCACTTACAACTTTCAAATTTATGAAGATATAACAAACATATGTGACTATGCGATTATGGTGCTTTCAGATGGTTTTACCTGTTCTTTTCCCCCCATCCAATTATACATTTACTTTCTCTGGTTATCCTTAGTAGTTAATAATTTTTATGCTTCGTACAATGATGCTGAAGCTTGGATGTCAGGGTGCTGGAGCTTGGCATGTGATTACAAAGGTGTTTGTCAAAGTATGAGCAGCATGCAGATAACTGCTACACAGAATTCTATTTGTTTCAATAAATCAATATGCCTTGTTTCTAAGTCAATACATGCTAGTCAGTCACGAAGTGTTCTTGTGAACCTGAGTGCCAATGCATCTCATTTCAAGCAAGGTCTACCTGTGTTGAAGTATAAACATCGGAGGGTTGGATTGAAACATCAGCATACCCCAATTGTTTCCTTATTTGGTAGCAAGGGAAAGGACAATGGCGATGGGGTGAGAAAATCTCTTCTCTGATGCTTTAGACTGCCTGTAATACTTTGTTTAGCTTTCTTCTCCTTTTCTTTTCTCTTCCTTCTATTTGTTTACTTGTCAGCAGTTGTTTTGGAAGGTTTGAAAGAAAAACAAATCTTTATAATTTGGTTTCCAATTATTTTTAAATTGTTGAAGGAGTGGCAAAACAAAAGTGTCTCTAACAGAGCCGAGGATTTTAGCTTAACATTATCATTTCTATCTTGTTACTGACAAGTGATTAATATTACTCAATGCGTTAACTCCGGAGAAGTCAGCAATTGCAGTATTTTTGTCATCAATGCATTTATCTTGTCATGTTTGATCATATCTTTCTGAACTCGTGTTCTTGATTTTTATGATATCTTGGGAAAAAAGATCACGAGTCTCAGAATTGCAGCTAGTTTTGTAAGCAAGGCAGAACATCTTAAACTGTCAAATGGGTTATGATATGTTCCATGTGATTAAGGTTACCCCATATGAAGATTGGGGTTTATGACAAGAAAATGTGTTTGATGTTATTTCAACCATCTTCATGAATTTTCCTGGATGCCAGAAATTATTACTGTTCATTCACGTTTCCAGATGGGCAACAATTTAGATCAGTAGTTATCTTTGGTTTTTTCTAAGTTCTTTTTGTGGTTCAAGTTGTTTGATATACAGAGTTAGTTCCCAATGGAAGGAGGATTTGGAGCGTTTATTCATTTTATTCACTATTATGTGCATGTCCTATTCTATTATAGTAATAATACTTTGTTTCTAGCAGGGTTCTCCATGGAAAGCTTTCGACAAAGTTGTTGAAAATTTTAAGGGACGGTCAGTAGGAGATGTATTGCGACAGCAAATTGAGAAAAAAGAGTTCTATGATGGTGGAGATGGTGGCAAAAAACCTCCAAGTGGTGGCGGCGGCAGTGGTGGCGGGGATAGCTCTAGCGGATCTGAGGAAAAATTAAGGCAATTGTTGAATTAAAAAACTGGCCTAAGCCTAAGTGGGTGGTTTAGGTAAAATGAAATCTTTAGACCCGTTCGATAACCATTTGTTTTCCGTCAGCATTCCGTTAGTATTTAACGGCAAATTGGATGGCAGGGACCAAAGTGCTCCTTATCTCAAACCTCAGGGTATTTTTGTTGAGTTTGAAAACTCAGGGACTAAAGTGTCACTTAACCCAAACCTCAGGGACCAAAAGTGT

mRNA sequence

GAGAGAAAAGCGAAGATGGCCCGACCTGACCCGGTTCGGGTCATTTTGAACTGGGTTGGGTCGGGTCGGTTTGTCCGTACAACCGACCTGAACCGGAAATTCAAACCGACCCGAACCGGAAATTTTACACCCCTAATCAATAGGAATTTAAGTTCAAATCATGGAGCATTATTTTCCTAATGTTAAAGGATTAGAATTGCACTTATTCTGCCCACTTACAACTTTCAAATTTATGAAGATATAACAAACATATGTGACTATGCGATTATGGTGCTTTCAGATGGTTTTACCTGTTCTTTTCCCCCCATCCAATTATACATTTACTTTCTCTGGTTATCCTTAGTAGTTAATAATTTTTATGCTTCGTACAATGATGCTGAAGCTTGGATGTCAGGGTGCTGGAGCTTGGCATGTGATTACAAAGGTGTTTGTCAAAGTATGAGCAGCATGCAGATAACTGCTACACAGAATTCTATTTGTTTCAATAAATCAATATGCCTTGTTTCTAAGTCAATACATGCTAGTCAGTCACGAAGTGTTCTTGTGAACCTGAGTGCCAATGCATCTCATTTCAAGCAAGGTCTACCTGTGTTGAAGTATAAACATCGGAGGGTTGGATTGAAACATCAGCATACCCCAATTGTTTCCTTATTTGGTAGCAAGGGAAAGGACAATGGCGATGGGGGTTCTCCATGGAAAGCTTTCGACAAAGTTGTTGAAAATTTTAAGGGACGGTCAGTAGGAGATGTATTGCGACAGCAAATTGAGAAAAAAGAGTTCTATGATGGTGGAGATGGTGGCAAAAAACCTCCAAGTGGTGGCGGCGGCAGTGGTGGCGGGGATAGCTCTAGCGGATCTGAGGAAAAATTAAGGCAATTGTTGAATTAAAAAACTGGCCTAAGCCTAAGTGGGTGGTTTAGGTAAAATGAAATCTTTAGACCCGTTCGATAACCATTTGTTTTCCGTCAGCATTCCGTTAGTATTTAACGGCAAATTGGATGGCAGGGACCAAAGTGCTCCTTATCTCAAACCTCAGGGTATTTTTGTTGAGTTTGAAAACTCAGGGACTAAAGTGTCACTTAACCCAAACCTCAGGGACCAAAAGTGT

Coding sequence (CDS)

ATGGTGCTTTCAGATGGTTTTACCTGTTCTTTTCCCCCCATCCAATTATACATTTACTTTCTCTGGTTATCCTTAGTAGTTAATAATTTTTATGCTTCGTACAATGATGCTGAAGCTTGGATGTCAGGGTGCTGGAGCTTGGCATGTGATTACAAAGGTGTTTGTCAAAGTATGAGCAGCATGCAGATAACTGCTACACAGAATTCTATTTGTTTCAATAAATCAATATGCCTTGTTTCTAAGTCAATACATGCTAGTCAGTCACGAAGTGTTCTTGTGAACCTGAGTGCCAATGCATCTCATTTCAAGCAAGGTCTACCTGTGTTGAAGTATAAACATCGGAGGGTTGGATTGAAACATCAGCATACCCCAATTGTTTCCTTATTTGGTAGCAAGGGAAAGGACAATGGCGATGGGGGTTCTCCATGGAAAGCTTTCGACAAAGTTGTTGAAAATTTTAAGGGACGGTCAGTAGGAGATGTATTGCGACAGCAAATTGAGAAAAAAGAGTTCTATGATGGTGGAGATGGTGGCAAAAAACCTCCAAGTGGTGGCGGCGGCAGTGGTGGCGGGGATAGCTCTAGCGGATCTGAGGAAAAATTAAGGCAATTGTTGAATTAA

Protein sequence

MVLSDGFTCSFPPIQLYIYFLWLSLVVNNFYASYNDAEAWMSGCWSLACDYKGVCQSMSSMQITATQNSICFNKSICLVSKSIHASQSRSVLVNLSANASHFKQGLPVLKYKHRRVGLKHQHTPIVSLFGSKGKDNGDGGSPWKAFDKVVENFKGRSVGDVLRQQIEKKEFYDGGDGGKKPPSGGGGSGGGDSSSGSEEKLRQLLN

Homology

[Close]

BLAST of Lcy11g017520 vs. ExPASy TrEMBL
Match: A0A0A0LVP5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G534740 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 1.2e-56
Identity = 120/146 (82.19%), Postives = 130/146 (89.04%), Query Frame = 0


Query: 58  MSSMQITATQNSICFNKSICLVSKSI----HASQSRSVLVNLSANASHFKQGLPVLKYKH 117
           MSSMQITATQNSIC NKSICLVSKSI    HA+QSR  +VNLSANAS+FKQGLPVLKY+H
Sbjct: 1   MSSMQITATQNSICANKSICLVSKSIYPSFHANQSRRAVVNLSANASYFKQGLPVLKYEH 60

Query: 118 RRVGLKHQHTPIVSLFGSKGKDNGDGGSPWKAFDKVVENFKGRSVGDVLRQQIEKKEFYD 177
           RRVGLK+QHTPIVSL+GSKGK + DGGSPWK  DKVVE+FKGRSV DVLRQQIEKKEFYD
Sbjct: 61  RRVGLKYQHTPIVSLYGSKGKGSDDGGSPWKGLDKVVESFKGRSVEDVLRQQIEKKEFYD 120

Query: 178 GGDGGKKPPSGGGGSGGGDSSSGSEE 200
           GGDGGK+PP GGGGSGGGDS  G E+
Sbjct: 121 GGDGGKRPPGGGGGSGGGDSGDGGED 146

[Close]

BLAST of Lcy11g017520 vs. ExPASy TrEMBL
Match: A0A6J1CES8 (uncharacterized protein LOC111010834 OS=Momordica charantia OX=3673 GN=LOC111010834 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 7.9e-56
Identity = 122/147 (82.99%), Postives = 133/147 (90.48%), Query Frame = 0


Query: 58  MSSMQITATQNSICFNKSICLVSKSIH----ASQSRSVLVNLSANASHFKQGLPVLKYKH 117
           MSSMQITATQNSIC ++SIC+ SKSI+    A++SRS LVNLSANAS+FKQGLPVLKYKH
Sbjct: 1   MSSMQITATQNSICSSRSICIASKSIYPSFRATRSRSALVNLSANASYFKQGLPVLKYKH 60

Query: 118 RRVGLKHQHTPIVSLFGSKGKDNGDGGSPWKAFDKVVENF-KGRSVGDVLRQQIEKKEFY 177
           RR GL HQHTPIVSLFGSKGK++GDGGSPWK FDKVVENF KGRSV DVLRQQIEKKEFY
Sbjct: 61  RRAGLNHQHTPIVSLFGSKGKESGDGGSPWKTFDKVVENFKKGRSVEDVLRQQIEKKEFY 120

Query: 178 DGGDGGKKPPSGGGGSGGGDSSSGSEE 200
           DGGDGGK+PPSGGGGS  GDSSSGSE+
Sbjct: 121 DGGDGGKRPPSGGGGS--GDSSSGSED 145

[Close]

BLAST of Lcy11g017520 vs. ExPASy TrEMBL
Match: A0A1S3BA69 (uncharacterized protein LOC103487859 OS=Cucumis melo OX=3656 GN=LOC103487859 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 7.4e-54
Identity = 118/145 (81.38%), Postives = 127/145 (87.59%), Query Frame = 0


Query: 58  MSSMQITATQNSICFNKSICLVSKSI----HASQSRSVLVNLSANASHFKQGLPVLKYKH 117
           MSSMQITATQNSIC NKSICLVSKSI    HA+QS   +VNLSANAS+FKQGLP+LKYKH
Sbjct: 1   MSSMQITATQNSICANKSICLVSKSIYPSFHANQSLRAVVNLSANASYFKQGLPILKYKH 60

Query: 118 RRVGLKHQHTPIVSLFGSKGKDNGDGGSPWKAFDKVVENF-KGRSVGDVLRQQIEKKEFY 177
           RRVGLKHQHTPIVSLFGSKGK + DGGSPWKAFDKVVE+F KG SV DVLR+QIEKKEFY
Sbjct: 61  RRVGLKHQHTPIVSLFGSKGKGSDDGGSPWKAFDKVVESFKKGGSVEDVLRKQIEKKEFY 120

Query: 178 DGGDGGKKPPSGGGGSGGGDSSSGS 198
           DGGDGG++PPSGGGG GGG    GS
Sbjct: 121 DGGDGGRRPPSGGGGGGGGGGGGGS 145

[Close]

BLAST of Lcy11g017520 vs. ExPASy TrEMBL
Match: A0A6J1K2H4 (uncharacterized protein LOC111490456 OS=Cucurbita maxima OX=3661 GN=LOC111490456 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 2.6e-51
Identity = 113/146 (77.40%), Postives = 125/146 (85.62%), Query Frame = 0


Query: 59  SSMQITATQNSICFNKSICLVSKSIH----ASQSRSVLVNLSANASHFKQGLPVLKYKHR 118
           S MQITATQNS+C NKS+CLVSKS +    ASQ+RS  VN SAN S+ K+GLPVLKY HR
Sbjct: 3   SMMQITATQNSLCPNKSLCLVSKSSYPSFLASQTRSAFVNPSANTSYLKKGLPVLKYDHR 62

Query: 119 RVGLKHQHTPIVSLFGSKGKDNGDGGSPWKAFDKVVENF-KGRSVGDVLRQQIEKKEFYD 178
           RVGLKH++TPI SLFGSKGKDNGDGGSPWKAFDKVVENF KGRSV D+LRQQIE K+FYD
Sbjct: 63  RVGLKHRYTPIASLFGSKGKDNGDGGSPWKAFDKVVENFKKGRSVEDILRQQIENKDFYD 122

Query: 179 GGDGGKKPPSGGGGSGGGDSSSGSEE 200
           GGDGG+ PP GGGGS GGDSSS SE+
Sbjct: 123 GGDGGRTPPGGGGGSSGGDSSSESED 148

[Close]

BLAST of Lcy11g017520 vs. ExPASy TrEMBL
Match: A0A6J1GSZ4 (uncharacterized protein LOC111457207 OS=Cucurbita moschata OX=3662 GN=LOC111457207 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 3.8e-50
Identity = 114/148 (77.03%), Postives = 125/148 (84.46%), Query Frame = 0


Query: 59  SSMQITATQNSICFNKSICLVSKSIH----ASQSRSVLVNLSANASHFKQGLPVLKYKHR 118
           S MQITATQNS+C NKSICLVSKS +    ASQ+RS  VN SANAS+ K+GLPVLKY HR
Sbjct: 3   SMMQITATQNSLCPNKSICLVSKSTYPSFLASQTRSAFVNPSANASYLKKGLPVLKYDHR 62

Query: 119 RVGLKHQHTPIVSLFGSKGKDNGDGGSPWKAFDKVVENF-KGRSVGDVLRQQIEKKEFYD 178
           RVGLKH++TPI SLFGSKGKDN DGGSPWKAFDKVVENF KGRSV D+LRQQIE K+FYD
Sbjct: 63  RVGLKHRYTPIASLFGSKGKDNADGGSPWKAFDKVVENFKKGRSVEDILRQQIENKDFYD 122

Query: 179 GGDGGKKPPSGGGGSG--GGDSSSGSEE 200
           GGDGG+ PP GGGG G  GGDSSS SE+
Sbjct: 123 GGDGGRTPPGGGGGGGSSGGDSSSESED 150

[Close]

BLAST of Lcy11g017520 vs. NCBI nr
Match: XP_038895689.1 (uncharacterized protein LOC120083861 [Benincasa hispida])

HSP 1 Score: 244.2 bits (622), Expect = 9.8e-61
Identity = 132/147 (89.80%), Postives = 136/147 (92.52%), Query Frame = 0


Query: 58  MSSMQITATQNSICFNKSICLVSKSI----HASQSRSVLVNLSANASHFKQGLPVLKYKH 117
           MSSMQITATQNSIC NKSICLVSKSI    HASQSRSVLVNLSAN S FKQGLPVLKYKH
Sbjct: 1   MSSMQITATQNSICSNKSICLVSKSIYPSFHASQSRSVLVNLSANGSSFKQGLPVLKYKH 60

Query: 118 RRVGLKHQHTPIVSLFGSKGKDNGDGGSPWKAFDKVVENF-KGRSVGDVLRQQIEKKEFY 177
           RRVGLKHQHTPIVSLFGSKGKD GDGGSPWKAFD+VVENF KGRSV DVLRQQIEKKEFY
Sbjct: 61  RRVGLKHQHTPIVSLFGSKGKDTGDGGSPWKAFDQVVENFKKGRSVEDVLRQQIEKKEFY 120

Query: 178 DGGDGGKKPPSGGGGSGGGDSSSGSEE 200
           DGG+GGK+PPSGGGGSG GDSSSGSE+
Sbjct: 121 DGGNGGKRPPSGGGGSGSGDSSSGSED 147

[Close]

BLAST of Lcy11g017520 vs. NCBI nr
Match: KGN65868.1 (hypothetical protein Csa_023343 [Cucumis sativus])

HSP 1 Score: 229.6 bits (584), Expect = 2.5e-56
Identity = 120/146 (82.19%), Postives = 130/146 (89.04%), Query Frame = 0


Query: 58  MSSMQITATQNSICFNKSICLVSKSI----HASQSRSVLVNLSANASHFKQGLPVLKYKH 117
           MSSMQITATQNSIC NKSICLVSKSI    HA+QSR  +VNLSANAS+FKQGLPVLKY+H
Sbjct: 1   MSSMQITATQNSICANKSICLVSKSIYPSFHANQSRRAVVNLSANASYFKQGLPVLKYEH 60

Query: 118 RRVGLKHQHTPIVSLFGSKGKDNGDGGSPWKAFDKVVENFKGRSVGDVLRQQIEKKEFYD 177
           RRVGLK+QHTPIVSL+GSKGK + DGGSPWK  DKVVE+FKGRSV DVLRQQIEKKEFYD
Sbjct: 61  RRVGLKYQHTPIVSLYGSKGKGSDDGGSPWKGLDKVVESFKGRSVEDVLRQQIEKKEFYD 120

Query: 178 GGDGGKKPPSGGGGSGGGDSSSGSEE 200
           GGDGGK+PP GGGGSGGGDS  G E+
Sbjct: 121 GGDGGKRPPGGGGGSGGGDSGDGGED 146

[Close]

BLAST of Lcy11g017520 vs. NCBI nr
Match: XP_022140099.1 (uncharacterized protein LOC111010834 [Momordica charantia])

HSP 1 Score: 226.9 bits (577), Expect = 1.6e-55
Identity = 122/147 (82.99%), Postives = 133/147 (90.48%), Query Frame = 0


Query: 58  MSSMQITATQNSICFNKSICLVSKSIH----ASQSRSVLVNLSANASHFKQGLPVLKYKH 117
           MSSMQITATQNSIC ++SIC+ SKSI+    A++SRS LVNLSANAS+FKQGLPVLKYKH
Sbjct: 1   MSSMQITATQNSICSSRSICIASKSIYPSFRATRSRSALVNLSANASYFKQGLPVLKYKH 60

Query: 118 RRVGLKHQHTPIVSLFGSKGKDNGDGGSPWKAFDKVVENF-KGRSVGDVLRQQIEKKEFY 177
           RR GL HQHTPIVSLFGSKGK++GDGGSPWK FDKVVENF KGRSV DVLRQQIEKKEFY
Sbjct: 61  RRAGLNHQHTPIVSLFGSKGKESGDGGSPWKTFDKVVENFKKGRSVEDVLRQQIEKKEFY 120

Query: 178 DGGDGGKKPPSGGGGSGGGDSSSGSEE 200
           DGGDGGK+PPSGGGGS  GDSSSGSE+
Sbjct: 121 DGGDGGKRPPSGGGGS--GDSSSGSED 145

[Close]

BLAST of Lcy11g017520 vs. NCBI nr
Match: XP_008444591.1 (PREDICTED: uncharacterized protein LOC103487859 [Cucumis melo])

HSP 1 Score: 220.3 bits (560), Expect = 1.5e-53
Identity = 118/145 (81.38%), Postives = 127/145 (87.59%), Query Frame = 0


Query: 58  MSSMQITATQNSICFNKSICLVSKSI----HASQSRSVLVNLSANASHFKQGLPVLKYKH 117
           MSSMQITATQNSIC NKSICLVSKSI    HA+QS   +VNLSANAS+FKQGLP+LKYKH
Sbjct: 1   MSSMQITATQNSICANKSICLVSKSIYPSFHANQSLRAVVNLSANASYFKQGLPILKYKH 60

Query: 118 RRVGLKHQHTPIVSLFGSKGKDNGDGGSPWKAFDKVVENF-KGRSVGDVLRQQIEKKEFY 177
           RRVGLKHQHTPIVSLFGSKGK + DGGSPWKAFDKVVE+F KG SV DVLR+QIEKKEFY
Sbjct: 61  RRVGLKHQHTPIVSLFGSKGKGSDDGGSPWKAFDKVVESFKKGGSVEDVLRKQIEKKEFY 120

Query: 178 DGGDGGKKPPSGGGGSGGGDSSSGS 198
           DGGDGG++PPSGGGG GGG    GS
Sbjct: 121 DGGDGGRRPPSGGGGGGGGGGGGGS 145

[Close]

BLAST of Lcy11g017520 vs. NCBI nr
Match: XP_022994855.1 (uncharacterized protein LOC111490456 [Cucurbita maxima])

HSP 1 Score: 211.8 bits (538), Expect = 5.4e-51
Identity = 113/146 (77.40%), Postives = 125/146 (85.62%), Query Frame = 0


Query: 59  SSMQITATQNSICFNKSICLVSKSIH----ASQSRSVLVNLSANASHFKQGLPVLKYKHR 118
           S MQITATQNS+C NKS+CLVSKS +    ASQ+RS  VN SAN S+ K+GLPVLKY HR
Sbjct: 3   SMMQITATQNSLCPNKSLCLVSKSSYPSFLASQTRSAFVNPSANTSYLKKGLPVLKYDHR 62

Query: 119 RVGLKHQHTPIVSLFGSKGKDNGDGGSPWKAFDKVVENF-KGRSVGDVLRQQIEKKEFYD 178
           RVGLKH++TPI SLFGSKGKDNGDGGSPWKAFDKVVENF KGRSV D+LRQQIE K+FYD
Sbjct: 63  RVGLKHRYTPIASLFGSKGKDNGDGGSPWKAFDKVVENFKKGRSVEDILRQQIENKDFYD 122

Query: 179 GGDGGKKPPSGGGGSGGGDSSSGSEE 200
           GGDGG+ PP GGGGS GGDSSS SE+
Sbjct: 123 GGDGGRTPPGGGGGSSGGDSSSESED 148

[Close]

BLAST of Lcy11g017520 vs. TAIR 10
Match: AT2G43630.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, nucleus, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT3G59640.2); Has 67 Blast hits to 67 proteins in 20 species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 1; Plants - 49; Viruses - 2; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 67.0 bits (162), Expect = 2.0e-11
Identity = 45/106 (42.45%), Postives = 59/106 (55.66%), Query Frame = 0


Query: 95  LSANASHFKQGLPVLKYKHRRVGLKHQHTPIVSLFGSKGK-DNGDGGSPWKAFDKVVENF 154
           L A A+   Q  P+L ++ R    K + +  V LFG K K D  D  SPWKA +K +   
Sbjct: 45  LRATAAVSTQFSPLLDHRRRLPTGKSKQSSAVCLFGGKDKPDGSDEISPWKAIEKAMGK- 104

Query: 155 KGRSVGDVLRQQIEKKEFYDGGDGGKKPPSGGGGSGGGDSSSGSEE 200
             +SV D+LR+QI+KK+FYD   GG  PP GGG  GGG +     E
Sbjct: 105 --KSVEDMLREQIQKKDFYDTDSGGNMPPRGGGSGGGGGNGEERPE 147

[Close]

BLAST of Lcy11g017520 vs. TAIR 10
Match: AT3G59640.1 (glycine-rich protein )

HSP 1 Score: 43.9 bits (102), Expect = 1.8e-04
Identity = 37/106 (34.91%), Postives = 56/106 (52.83%), Query Frame = 0


Query: 93  VNLSANASHFKQGLPVLKYKHRRVGLKHQHTPIVSLFGSKGKDNGDG--GSPWKAFDKVV 152
           +  SA++S   Q  P+  ++ R      +  P+V L G K K NG     S W+A +K +
Sbjct: 45  IRASASSSMSSQFSPLQNHRCR----NQRQGPVVCLLGGKDKSNGSNELSSTWEAIEKAM 104

Query: 153 ENFKGRSVGDVLRQQIEKKEFYDGGDGGKKPPSGGGGSGGGDSSSG 197
                +SV D+LR+QI+KK+   GG   +    GGGG  GG++ SG
Sbjct: 105 GK---KSVEDMLREQIQKKD--TGGIPPRGRGGGGGGRNGGNNGSG 141

[Close]

BLAST of Lcy11g017520 vs. TAIR 10
Match: AT3G59640.2 (glycine-rich protein )

HSP 1 Score: 43.9 bits (102), Expect = 1.8e-04
Identity = 37/106 (34.91%), Postives = 56/106 (52.83%), Query Frame = 0


Query: 93  VNLSANASHFKQGLPVLKYKHRRVGLKHQHTPIVSLFGSKGKDNGDG--GSPWKAFDKVV 152
           +  SA++S   Q  P+  ++ R      +  P+V L G K K NG     S W+A +K +
Sbjct: 45  IRASASSSMSSQFSPLQNHRCR----NQRQGPVVCLLGGKDKSNGSNELSSTWEAIEKAM 104

Query: 153 ENFKGRSVGDVLRQQIEKKEFYDGGDGGKKPPSGGGGSGGGDSSSG 197
                +SV D+LR+QI+KK+   GG   +    GGGG  GG++ SG
Sbjct: 105 GK---KSVEDMLREQIQKKD--TGGIPPRGRGGGGGGRNGGNNGSG 141

The following BLAST results are available for this feature:

BLAST of Lcy11g017520 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy11g017520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVP5	1.2e-56	82.19	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G534740 PE=4 SV=1	[more]
A0A6J1CES8	7.9e-56	82.99	uncharacterized protein LOC111010834 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]
A0A1S3BA69	7.4e-54	81.38	uncharacterized protein LOC103487859 OS=Cucumis melo OX=3656 GN=LOC103487859 PE=...	[more]
A0A6J1K2H4	2.6e-51	77.40	uncharacterized protein LOC111490456 OS=Cucurbita maxima OX=3661 GN=LOC111490456...	[more]
A0A6J1GSZ4	3.8e-50	77.03	uncharacterized protein LOC111457207 OS=Cucurbita moschata OX=3662 GN=LOC1114572...	[more]

BLAST of Lcy11g017520 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895689.1	9.8e-61	89.80	uncharacterized protein LOC120083861 [Benincasa hispida]	[more]
KGN65868.1	2.5e-56	82.19	hypothetical protein Csa_023343 [Cucumis sativus]	[more]
XP_022140099.1	1.6e-55	82.99	uncharacterized protein LOC111010834 [Momordica charantia]	[more]
XP_008444591.1	1.5e-53	81.38	PREDICTED: uncharacterized protein LOC103487859 [Cucumis melo]	[more]
XP_022994855.1	5.4e-51	77.40	uncharacterized protein LOC111490456 [Cucurbita maxima]	[more]

BLAST of Lcy11g017520 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G43630.1	2.0e-11	42.45	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT3G59640.1	1.8e-04	34.91	glycine-rich protein	[more]
AT3G59640.2	1.8e-04	34.91	glycine-rich protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 188..206
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 169..206
None	No IPR available	PANTHER	PTHR35483:SF1	NUCLEUSENVELOPE PROTEIN	coord: 54..199
None	No IPR available	PANTHER	PTHR35483	NUCLEUSENVELOPE PROTEIN	coord: 54..199

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g017520.1	Lcy11g017520.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane