Lcy11g017500 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g017500
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	signal recognition particle 14 kDa protein
Location	Chr11: 43436159 .. 43442379 (+)
RNA-Seq Expression	Lcy11g017500
Synteny	Lcy11g017500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTAAAATCGACGGGAAACTTCTGCAAGGAGGTCTCTTACTTACGAGGAGGCAGACTAGTCCTATGTCTGCACAGTTCCAAGTAAACGTCGAAAAAAAATTCCTAATGATGTTGATCGTCCTCCTTCTTAAGGAGTTCATTCGTCTAGGAGGTTAGGGCTAGGAGGTTAAAGATTTTTTATTTACATCATATTTGTTTAAAACAATTTTAATTTGTAACCTTTTTTTAATAGTTTGGTTTTTAAATTTATTTGTCTAGTAAGCAAATGAAGTAGCCTTGTCATCATATCCACGTTAGCAAATAACGGTCCAGTCAGTGTCGCCGCACCCAACCCATTTCTCTTTCAATGCCTAAAGCCCAAACTAAGGTTGAATTATGGCGTAGCCAGTAGTTAGCCCAATTATGAATTACCCACTCATAACCTAAAGCCCATTTCCCCTTTATTACCCCGACAGTCAGCTGCTGCTACTCTGATTCCATATCCTCCAATTTGTCCAGTGCACCTCTCTCTCAAATCCCAACTATTTTTTCTTCGCCTCAGACTCTTAAAGCCCGCATCTTGCTTCCAACCCGCCATGAGCCATCGAAGGATTCTACTGGGAACTCTTGGCCGGCAGCTTTAGGTAACCCTCGTTCTATATCCTTTTAGGACGAATGAAAATGTGAGAGAGAACGAAACCTGGGAGAGGATAAGAGGGATAAGAGAGATAAGAGAGAATTCTTACTTCTTTACTTAGTTTTTGTATGCATGTAGTGTAGAGAAATTTATACTGGACATATTGAAGAGATGGGCAATCGAGGTTTAGATATGAATTGGGTATTTTAATGATCCAACAAACTGTGAAATAGAATGTTAAGAGAAGAAATTTAGATAATGTTGTTAACAATATACTAAATGATTAAATATATACCAGTTAACAGGTTAAGCTTTTGGATTTTGTAGGATTTAACAACCTATATCAATACTGGGTGGAAAAAACCGAACCGAATCTCGAACCGGTTCGGTTCAGGTTTTTTTCTGACCGAACCGAACCGATTCACGTATTCTTTACCCGAACCGAACTTTCCTGGCGTTTTTTTTTTTTTTTTCGATAGTCTAACAATCGTTTGTTTCCACTTCCATTCGCAATCTCTATTCTCACTTTCGCAGTTCGTCTCTTCATCGCCTGCGTAATCACCTTCAAAATCCACCGCCGTCAACCTCTTCTGAAGGATTTGTTGAGGCTTGACGACAATGGGCTGCTGAAATCAAACAGGTCAGTGGGTTTTTCTTCCACTCCAGAACAAGCTATGGAATTTCCCTTTTTTTTCCTCGACAAAACTTCCATTCGTCAATCTCTCTTCTCACTTTTACTCGATTCAATTTCTCCTCGCATCTTCTTTGCCCGTGCTTGTCGCCATCGCCGAGCAGCTTGCTGTAGTGTTCTCTGGGTTTCCGCCGCCGTCGAAGCTGTGCCGTCTGGGTTTATTCGCCATTGCCGCCGCCGCTGAAACTTGCTGTCGAGTAAGGATTTCAAAATTCTTTATGATTATATGCTTGAATTTATCTTCTACATCAAATGTTGGCTTTTCAAGTTATGAGGTCTGATGTTCTGAATTGTGTGTTTGTTATGGCTGCTGCTTTGAGCTTTTTGGTTCTCTTTCCTGAGTTTTTGCATATTGTTTGACAATCGACGTCGTTATTTGAAGAGGACATTATCTATTTAAATGTTATGGAAGAGCTTTTTGTCCTTAGCTCGGAGTTCGGGTTCATCCCGGTTTGTGATTTTATATCAGTTATGAAGTTGTTTGACTTCTTATAGAGGGGAAAAAAAAAAGACACTCTGTCTGTCCTGTTTCTGAAACAACCATTGACATGGGATAACTCATTTAAAAAGAAAAAGCCATTTTGTAGCTTGGATTTCCCTTTTTCTTTCCCCTTTAACTTGGAAACTTTAGATGAATAGTTTGTTTATATTATTGGGTATTGTATTGCGATATTCCCAAATCCCATGGTCGTATTTTTAGCTTTGTAAGTTGAAAAAACAATCTATAGTACTGAGATCTCAGTGCTCTACTTGTGAAGCCCATGGAGAATTTTTCTGTTTTTAGGGCAAGTGGGTTTTTGTTGAGGTTCGTTTAAGTTTGAATTGTTCTGGTCTTTTGAATTTCAAGTTACTGAAAGTTCTAAAAGAATAGCCGATATTATTATGGTATATTATATGAATGGAAGCTGTAGAATTAAAGGCAATGTATCCTGTATTGTAAACGGATAGATGCATCTACTAAAGAAATTCAAAACCTACCTTCAGGGTACCCATTTCTTAGTACAAGGTGCAAAAAAGAGATGAGTAGAAGCCTACCATTACCAAAAGAAACCATAAAAGTAATACAAATGAATTGAAACTCAAAAGAAAGCCAAAATAAATTCATGTACCCATTCCCCAATACTAAATTAGAGAGCCAATAAAAGCAACATTAGTTGGACCAAAATGTCAAGAGGAAATATAGAGTAGAAACGAAGTTGAGTTTATAGTTATTAATGTTTGAGTTTATAGTTATTATTGGTTTTGCAATAGCTTGGTCTTGTTTTGTGAATTTTGGTTTGACTTTTATCCCAGGATGACTTCGTCTTTTACAAACCATTTTATAGTTATTAATGTTTGAGTTTATAGTTATTAATTTTGGTTTGAGTAACTGTAATCTAGTGGATGAAACTGCAAGTTCTTGATCTTAGTGTAAACCATTTTGTTGTCTCTAAAGGTTGCAGTTGCTGGAGATCGATGGAGATCTTCAGGCTCTTATGGATGATTTCTGTGAAACCAACTTAACTTGTGCTGCAAAAGCTGCTTAGGACCAAAACAAAACTTCTCTGCCTGAATTGGATGTTGTTTGTTTTGATATTTTTGAACTTGGCTTGGGTTTGGATCTGTCTTCTCATATCTTGTCAATTCTGATCTGGGTTCTATGTATTGTTCTCGTTTGAACTGGTTCAATGTTTCTTTTTCTTAATTTGAGTTGGGTTTGTTTCGTTCATGTACTTTGCCACTCAAGTGAAAGAGAGAAAATGGGGGATTTTTTCTTCTTATGTTTTGGCTCTAAATGGTGGAATTTGATATGTTTTGGCTCTAAAGGTTGCAAATGGAAGACAAGTACATTAAGAAATTTTACACCCCTACTCACTGCTTCGTCTCACTCCGTTGAAGGTTGAACAGACGTCCATTGACTCGGTTGCTCATATATCTCAAGATCTGCATCACTACTATCGCCATGGTAATTTCATTTTCTCTTCGTCTTTCTCATCTCTTGTTTGAATCATTCTATCCATTCATGTTACAGCATCTGCATTTTGATTTTTCATCTTTATCTCATAATTTGACCTGATTAAGGAATATCTATGTCTCGTTGTTGGTTTTGATGAATTTTTTTTTTTTTAGATTTTGCTTTTTGATTACTGCAATTGTGGATTTGTCTTTTAGCGTTGTGCATATGAATGAAATTCAAGTTGCGTGTACTGCATTATTGCATCTTTTCTCCAGTTCCACCACTCGGCTCGATCTTATTTTCAATGGTTGCTTTTCTATTTAAGCGGAGGAAATTGGGCCTAGTGGTGTTTTTTATTCTAATTATGATATAATATCTGATTGATCACATTTTTTAATCTCTATTGGTTGGAAGTCTTGGTGGAAATTCATTCTGTTGCAGGAGTTTTAGTTCTTTCATTCAAATTTGGCAAAAAGAATTGCTGAATTTGCCAAGTACAGACTCTTCGATGGCAGTTAGGTCTGTAAAAATCGACCAATTAATGGACTTACTCCCTTATGGTAGAAAATAATGATTAAAGAAAAATCTAACGACAGATGGTATTGGCCAAACTATAAGAGAAGGAATTGAAATGCTATATCACCTCATTTGCCCCCAGGAACATTGGATTGGCCCTTGAGTTTATTTGGCCAACTTGGATTCAAATGGGGCGTGGTTCTTTGGTAAGTCTTGAGTAGCCAAACTATAAAAATATGAAAGTTATTTGGTATTTGAATTTCTAACCATAACCCATAGTTTGTTATAAGTTCCAATTAAACTAGATGTACCATCGTTTCTCTCGAAATTGCTTAGTGCAGCTTCTGCATATTTTGCATTAGTCTTACAAAGTTTTTTCTTCCAACACTTCCTCATGCAACCTAGTAATTTTCTCTGCCAATGGTCCAAGAGAAAGCATTTAGGATCCCTCTCACTCGGGACTTCATATATGGACTTAATTTTCATGTTATTAAATTTGAATTTGTATGGAGACAAGTATAAGTCCTGATGTTGTGGTGTGTCTGTCTTAAGCATCTTAATAGGTTCCCCAATGTTTTCTTTCTAACTTTGTTTGATAGAAAAGTCAGCTTCCATTGGGTTGGAAAACCTGATCAACCCTAAAGTAATGAACAGTACAGATTCTTTCTTCAAAAGAGAAGTCCACTATTATATGTTGTCACCAAGGCATATAGCTTTTGATGATACGTACTCCAACATTTCCTAGGCTCACTAAGCTTCTCAGTTTTCACTAAGCAAACCAAATTCTGGAAGTTCCTGTTTCAGGGTTTCAAAACCTTGCTGCTGTATTCGACTTGCTGAAATTTGCATCTAGAGCTAACCTATTGGCACATATGAAAGGAAAGAAGCAACGGAATCTTCAATGACAAGTGTAGACCATGTAAATTTTATGATCTTATTCAGTTTACGACTAGAGTACCTAGAGTCTTTTACAGTGTTTTTCTTTGGCTGGTAGATGAACAATGATTTTTATAATTACTCCACTTTTTTGATCAATGAGGGTATTTTTTTTTTTAAAATAAAAAGACCTCCCCTTTCAAGCAAGGAGTGTGTGCATTAACTCACTATGCAAGCACATGTAGTCGTAGGTAGTAATTTGTGAATCAAGGTTGATCCTACAAGGACTAATTTATGTAAATTTGATAAAATTGAGTCCCAACCAAAATGTTAGAGGTTTGAATCCCCCCTTCCACATATTGAACTGAAAAAAGTGACAACTCAACTCCTAAAAAAATCTTCAACAGAAAATGCAAAAATGAAGAACAAATGATGCATTTCACTCCATTTAATTCAAAACTAAGTAAAGAAAGATGTTAAATTAAGCCCATTTTATGGCATTATCAAAAACTGTCTCTTGCCTCCTTGGCCTTGATTTTCTATGGTTGATTCTTTAATGGACGTATCTGTTCCTTGTCAACTACTGGAAAAGATGTCAGATTGCGAGCAGGAGTTCACTCATGAGTTTCCTACAAAGAGAGGATGAACTGTTGTTATTGAGTAGAGTTGCAAAAAATTCACTGCAGATAGGAATGTTGTTGCCAACACCTTGCAGATTCTACTTAAGAACAAGAACACAATTGCTATATCAAGTTTAGTCGTTGTCTCACTGGTATTTGGACGACAGTACTTAAATTGACTTGATTTATGCAATTTATCAGTCCGAATAATGAGATATGCACATTACCATTTTATTTGTCTCACTGATATTTGGACTATACTAAGTTACTTGATTTATGGAATTTATCGATCCAAATTCTGAGATGTGCACAATTAGCATTAAACGTTTCATTCAAGATTAGAATTCTTTGGCTTGATTATGATGTTGATAAGTTCCTTTTCTTTTGATTTAGGTTCTACTGCAGCTAGACCCTTTTCTCAATGAACTTACCAGCATGTTTGAGCGTAGTACTGAGAAGGGTTCAGTGTGGGTTACTCTAAAACGATGTATGTATATCAGCTTGTTGATTAGTTTCGTGAATCTTTATGATAAACTTTAGAACTCTGATTAGAAACTATACTGTATCTCATATTGTTGCAGCATCACTGAAGTCCAAGGTGCAGAGAAATAAAATGACCACTGCTGGTCAACCTATCGAGTACAGGTGCCTCATCCGTGCAACTGATGGGAAGAAGACAATTTCAACTTCGGTAAGTATTGACTCATCTTTTAGCCTCTCTCTCTCTCTTTTTTTACTCATCGTTTTTATTTCGAGGGTTTCTAACTTTCTTGAATCCGAAGCATTTGTAACACTTTCTCCTGAACTGGCTAGGTTGGAGCAAAAGATCACCTGAAATTTCTAGCTTCCTATTCAACCATTCTTAAAGCTCACATGACTGCTCTTAAAAAGAGAGAGAGGAAGGACAAGAAGAAGGCACCAGAGGCAGAGAAGGATCTGAAGAAAAAACCCAGGAAAGGATGA

mRNA sequence

ATGTTTAAAATCGACGGGAAACTTCTGCAAGGAGGTCTCTTACTTACGAGGAGGCAGACTAGTCCTATGTCTGCACAGTTCCAAGTAAACGTCGAAAAAAAATTCCTAATGATGTTGATCGTCCTCCTTCTTAAGGAGTTCATTCGTCTAGGAGTCAGCTGCTGCTACTCTGATTCCATATCCTCCAATTTGTCCAGTGCACCTCTCTCTCAAATCCCAACTATTTTTTCTTCGCCTCAGACTCTTAAAGCCCGCATCTTGCTTCCAACCCGCCATGAGCCATCGAAGGATTCTACTGGGAACTCTTGGCCGGCAGCTTTAGGTCAGTGGGTTTTTCTTCCACTCCAGAACAAGCTATGGAATTTCCCTTTTTTTTCCTCGACAAAACTTCCATTCGTCAATCTCTCTTCTCACTTTTACTCGATTCAATTTCTCCTCGCATCTTCTTTGCCCGTGCTTGTCGCCATCGCCGAGCAGCTTGCTGTAGTGTTCTCTGGGTTTCCGCCGCCGTCGAAGCTGTGCCGTCTGGGTTTATTCGCCATTGCCGCCGCCGCTGAAACTTGCTGTCGAGTTGAACAGACGTCCATTGACTCGGTTGCTCATATATCTCAAGATCTGCATCACTACTATCGCCATGATAGGAATGTTGTTGCCAACACCTTGCAGATTCTACTTAAGAACAAGAACACAATTGCTATATCAAGTTTAGTCGTTGTCTCACTGGTTCTACTGCAGCTAGACCCTTTTCTCAATGAACTTACCAGCATGTTTGAGCGTAGTACTGAGAAGGGTTCAGTGTGGGTTACTCTAAAACGATCATCACTGAAGTCCAAGGTGCAGAGAAATAAAATGACCACTGCTGGTCAACCTATCGAGTACAGGTGCCTCATCCGTGCAACTGATGGGAAGAAGACAATTTCAACTTCGGTTGGAGCAAAAGATCACCTGAAATTTCTAGCTTCCTATTCAACCATTCTTAAAGCTCACATGACTGCTCTTAAAAAGAGAGAGAGGAAGGACAAGAAGAAGGCACCAGAGGCAGAGAAGGATCTGAAGAAAAAACCCAGGAAAGGATGA

Coding sequence (CDS)

ATGTTTAAAATCGACGGGAAACTTCTGCAAGGAGGTCTCTTACTTACGAGGAGGCAGACTAGTCCTATGTCTGCACAGTTCCAAGTAAACGTCGAAAAAAAATTCCTAATGATGTTGATCGTCCTCCTTCTTAAGGAGTTCATTCGTCTAGGAGTCAGCTGCTGCTACTCTGATTCCATATCCTCCAATTTGTCCAGTGCACCTCTCTCTCAAATCCCAACTATTTTTTCTTCGCCTCAGACTCTTAAAGCCCGCATCTTGCTTCCAACCCGCCATGAGCCATCGAAGGATTCTACTGGGAACTCTTGGCCGGCAGCTTTAGGTCAGTGGGTTTTTCTTCCACTCCAGAACAAGCTATGGAATTTCCCTTTTTTTTCCTCGACAAAACTTCCATTCGTCAATCTCTCTTCTCACTTTTACTCGATTCAATTTCTCCTCGCATCTTCTTTGCCCGTGCTTGTCGCCATCGCCGAGCAGCTTGCTGTAGTGTTCTCTGGGTTTCCGCCGCCGTCGAAGCTGTGCCGTCTGGGTTTATTCGCCATTGCCGCCGCCGCTGAAACTTGCTGTCGAGTTGAACAGACGTCCATTGACTCGGTTGCTCATATATCTCAAGATCTGCATCACTACTATCGCCATGATAGGAATGTTGTTGCCAACACCTTGCAGATTCTACTTAAGAACAAGAACACAATTGCTATATCAAGTTTAGTCGTTGTCTCACTGGTTCTACTGCAGCTAGACCCTTTTCTCAATGAACTTACCAGCATGTTTGAGCGTAGTACTGAGAAGGGTTCAGTGTGGGTTACTCTAAAACGATCATCACTGAAGTCCAAGGTGCAGAGAAATAAAATGACCACTGCTGGTCAACCTATCGAGTACAGGTGCCTCATCCGTGCAACTGATGGGAAGAAGACAATTTCAACTTCGGTTGGAGCAAAAGATCACCTGAAATTTCTAGCTTCCTATTCAACCATTCTTAAAGCTCACATGACTGCTCTTAAAAAGAGAGAGAGGAAGGACAAGAAGAAGGCACCAGAGGCAGAGAAGGATCTGAAGAAAAAACCCAGGAAAGGATGA

Protein sequence

MFKIDGKLLQGGLLLTRRQTSPMSAQFQVNVEKKFLMMLIVLLLKEFIRLGVSCCYSDSISSNLSSAPLSQIPTIFSSPQTLKARILLPTRHEPSKDSTGNSWPAALGQWVFLPLQNKLWNFPFFSSTKLPFVNLSSHFYSIQFLLASSLPVLVAIAEQLAVVFSGFPPPSKLCRLGLFAIAAAAETCCRVEQTSIDSVAHISQDLHHYYRHDRNVVANTLQILLKNKNTIAISSLVVVSLVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLKFLASYSTILKAHMTALKKRERKDKKKAPEAEKDLKKKPRKG

Homology

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BLAST of Lcy11g017500 vs. ExPASy Swiss-Prot
Match: O04421 (Signal recognition particle 14 kDa protein OS=Arabidopsis thaliana OX=3702 GN=SRP14 PE=2 SV=2)

HSP 1 Score: 174.9 bits (442), Expect = 1.7e-42
Identity = 90/109 (82.57%), Postives = 102/109 (93.58%), Query Frame = 0


Query: 241 LVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 300
           +VLLQLDPFLNELTSMFE+S EKGSVWVTLKRSSLKSKVQ+ K+++ G+ IEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFEKSKEKGSVWVTLKRSSLKSKVQKRKLSSVGESIEYRCLIRAT 60

Query: 301 DGKKTISTSVGAKDHLKFLASYSTILKAHMTALKKRERKDKKKAPEAEK 350
           DGKKT+STSVGAKDH +F ASY+TILKAHMTALKKRERKD+KK+ EAEK
Sbjct: 61  DGKKTVSTSVGAKDHQRFQASYATILKAHMTALKKRERKDRKKSTEAEK 109

[Close]

BLAST of Lcy11g017500 vs. ExPASy Swiss-Prot
Match: O04433 (Signal recognition particle 14 kDa protein OS=Oryza sativa subsp. japonica OX=39947 GN=SRP14 PE=2 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.6e-35
Identity = 79/117 (67.52%), Postives = 98/117 (83.76%), Query Frame = 0


Query: 241 LVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 300
           +V+LQ DPFL+ELTSM+ERSTEKGSVWVT+KRSS+K + +  KM   G+ +EYRCL+RAT
Sbjct: 1   MVVLQPDPFLSELTSMYERSTEKGSVWVTMKRSSMKCQARLKKMAAKGEAVEYRCLVRAT 60

Query: 301 DGKKTISTSVGAKDHLKFLASYSTILKAHMTALKKRERKDKKKAPEAEKDLKKKPRK 358
           DGKK I T++ AK++LKF ASY+T+LKAHM ALKKRERKDKKKA E EK  +K P+K
Sbjct: 61  DGKKNICTALSAKEYLKFQASYATVLKAHMHALKKRERKDKKKAAEVEKIPEKAPKK 117

[Close]

BLAST of Lcy11g017500 vs. ExPASy Swiss-Prot
Match: P37108 (Signal recognition particle 14 kDa protein OS=Homo sapiens OX=9606 GN=SRP14 PE=1 SV=2)

HSP 1 Score: 86.3 bits (212), Expect = 7.8e-16
Identity = 49/108 (45.37%), Postives = 74/108 (68.52%), Query Frame = 0


Query: 241 LVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAG-QPIEYRCLIRA 300
           +VLL+ + FL ELT +F++    GSV++TLK+   ++K    K T  G +P + +CL+RA
Sbjct: 1   MVLLESEQFLTELTRLFQKCRTSGSVYITLKKYDGRTKPIPKKGTVEGFEPADNKCLLRA 60

Query: 301 TDGKKTISTSVGAKDHLKFLASYSTILKAHMTALKKRERKDKKKAPEA 348
           TDGKK IST V +K+  KF  +YS +L+A+M  LKKR++K+K K  +A
Sbjct: 61  TDGKKKISTVVSSKEVNKFQMAYSNLLRANMDGLKKRDKKNKTKKTKA 108

[Close]

BLAST of Lcy11g017500 vs. ExPASy Swiss-Prot
Match: Q4R5C7 (Signal recognition particle 14 kDa protein OS=Macaca fascicularis OX=9541 GN=SRP14 PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 7.8e-16
Identity = 49/108 (45.37%), Postives = 74/108 (68.52%), Query Frame = 0


Query: 241 LVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAG-QPIEYRCLIRA 300
           +VLL+ + FL ELT +F++    GSV++TLK+   ++K    K T  G +P + +CL+RA
Sbjct: 1   MVLLESEQFLTELTRLFQKCRTSGSVYITLKKYDGRTKPIPKKGTVEGFEPADNKCLLRA 60

Query: 301 TDGKKTISTSVGAKDHLKFLASYSTILKAHMTALKKRERKDKKKAPEA 348
           TDGKK IST V +K+  KF  +YS +L+A+M  LKKR++K+K K  +A
Sbjct: 61  TDGKKKISTVVSSKEVNKFQMAYSNLLRANMDGLKKRDKKNKTKKTKA 108

[Close]

BLAST of Lcy11g017500 vs. ExPASy Swiss-Prot
Match: Q5RBX7 (Signal recognition particle 14 kDa protein OS=Pongo abelii OX=9601 GN=SRP14 PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 7.8e-16
Identity = 49/108 (45.37%), Postives = 74/108 (68.52%), Query Frame = 0


Query: 241 LVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAG-QPIEYRCLIRA 300
           +VLL+ + FL ELT +F++    GSV++TLK+   ++K    K T  G +P + +CL+RA
Sbjct: 1   MVLLESEQFLTELTRLFQKCRTSGSVYITLKKYDGRTKPIPKKGTVEGFEPADNKCLLRA 60

Query: 301 TDGKKTISTSVGAKDHLKFLASYSTILKAHMTALKKRERKDKKKAPEA 348
           TDGKK IST V +K+  KF  +YS +L+A+M  LKKR++K+K K  +A
Sbjct: 61  TDGKKKISTVVSSKEVNKFQMAYSNLLRANMDGLKKRDKKNKTKKTKA 108

[Close]

BLAST of Lcy11g017500 vs. ExPASy TrEMBL
Match: A0A6J1K2P1 (signal recognition particle 14 kDa protein-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111490504 PE=3 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 2.3e-50
Identity = 112/117 (95.73%), Postives = 115/117 (98.29%), Query Frame = 0


Query: 241 LVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 300
           +VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 60

Query: 301 DGKKTISTSVGAKDHLKFLASYSTILKAHMTALKKRERKDKKKAPEAEKDLKKKPRK 358
           DGKKTISTSVGAKDHL+F ASYSTILKAHMTALKKRERKD+KKAPEAEKD KKKPRK
Sbjct: 61  DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDRKKAPEAEKDSKKKPRK 117

[Close]

BLAST of Lcy11g017500 vs. ExPASy TrEMBL
Match: A0A6J1GR82 (signal recognition particle 14 kDa protein-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456777 PE=3 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 2.3e-50
Identity = 112/117 (95.73%), Postives = 115/117 (98.29%), Query Frame = 0


Query: 241 LVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 300
           +VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 60

Query: 301 DGKKTISTSVGAKDHLKFLASYSTILKAHMTALKKRERKDKKKAPEAEKDLKKKPRK 358
           DGKKTISTSVGAKDHL+F ASYSTILKAHMTALKKRERKD+KKAPEAEKD KKKPRK
Sbjct: 61  DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDRKKAPEAEKDSKKKPRK 117

[Close]

BLAST of Lcy11g017500 vs. ExPASy TrEMBL
Match: A0A6J1KGP7 (signal recognition particle 14 kDa protein-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111495612 PE=3 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 1.1e-49
Identity = 112/117 (95.73%), Postives = 114/117 (97.44%), Query Frame = 0


Query: 241 LVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 300
           +VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 60

Query: 301 DGKKTISTSVGAKDHLKFLASYSTILKAHMTALKKRERKDKKKAPEAEKDLKKKPRK 358
           DGKKTISTSVGAKDHL+F ASYSTILKAHMTALKKRERKDKKKA EAEK LKKKPRK
Sbjct: 61  DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRK 117

[Close]

BLAST of Lcy11g017500 vs. ExPASy TrEMBL
Match: A0A0A0LYE0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G534730 PE=3 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 1.1e-49
Identity = 112/117 (95.73%), Postives = 114/117 (97.44%), Query Frame = 0


Query: 241 LVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 300
           +VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 60

Query: 301 DGKKTISTSVGAKDHLKFLASYSTILKAHMTALKKRERKDKKKAPEAEKDLKKKPRK 358
           DGKKTISTSVGAKDHL+F ASYSTILKAHMTALKKRERKDKKKA EAEK LKKKPRK
Sbjct: 61  DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRK 117

[Close]

BLAST of Lcy11g017500 vs. ExPASy TrEMBL
Match: A0A1S3BBI8 (signal recognition particle 14 kDa protein OS=Cucumis melo OX=3656 GN=LOC103487869 PE=3 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 1.1e-49
Identity = 112/117 (95.73%), Postives = 114/117 (97.44%), Query Frame = 0


Query: 241 LVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 300
           +VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 60

Query: 301 DGKKTISTSVGAKDHLKFLASYSTILKAHMTALKKRERKDKKKAPEAEKDLKKKPRK 358
           DGKKTISTSVGAKDHL+F ASYSTILKAHMTALKKRERKDKKKA EAEK LKKKPRK
Sbjct: 61  DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRK 117

[Close]

BLAST of Lcy11g017500 vs. NCBI nr
Match: XP_038893990.1 (signal recognition particle 14 kDa protein isoform X2 [Benincasa hispida])

HSP 1 Score: 210.3 bits (534), Expect = 2.7e-50
Identity = 113/117 (96.58%), Postives = 115/117 (98.29%), Query Frame = 0


Query: 241 LVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 300
           +VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 60

Query: 301 DGKKTISTSVGAKDHLKFLASYSTILKAHMTALKKRERKDKKKAPEAEKDLKKKPRK 358
           DGKKTISTSVGAKDHL+F ASYSTILKAHMTALKKRERKDKKKAPEAEK LKKKPRK
Sbjct: 61  DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAPEAEKGLKKKPRK 117

[Close]

BLAST of Lcy11g017500 vs. NCBI nr
Match: XP_038893989.1 (signal recognition particle 14 kDa protein isoform X1 [Benincasa hispida])

HSP 1 Score: 209.9 bits (533), Expect = 3.6e-50
Identity = 113/116 (97.41%), Postives = 114/116 (98.28%), Query Frame = 0


Query: 242 VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATD 301
           VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATD
Sbjct: 9   VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATD 68

Query: 302 GKKTISTSVGAKDHLKFLASYSTILKAHMTALKKRERKDKKKAPEAEKDLKKKPRK 358
           GKKTISTSVGAKDHL+F ASYSTILKAHMTALKKRERKDKKKAPEAEK LKKKPRK
Sbjct: 69  GKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAPEAEKGLKKKPRK 124

[Close]

BLAST of Lcy11g017500 vs. NCBI nr
Match: XP_022954536.1 (signal recognition particle 14 kDa protein-like isoform X1 [Cucurbita moschata] >XP_022954537.1 signal recognition particle 14 kDa protein-like isoform X1 [Cucurbita moschata] >XP_022994924.1 signal recognition particle 14 kDa protein-like isoform X1 [Cucurbita maxima] >XP_022994925.1 signal recognition particle 14 kDa protein-like isoform X1 [Cucurbita maxima] >XP_023541199.1 signal recognition particle 14 kDa protein-like [Cucurbita pepo subsp. pepo] >XP_023541200.1 signal recognition particle 14 kDa protein-like [Cucurbita pepo subsp. pepo] >KAG6573374.1 Signal recognition particle 14 kDa protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012543.1 Signal recognition particle 14 kDa protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 209.5 bits (532), Expect = 4.7e-50
Identity = 112/117 (95.73%), Postives = 115/117 (98.29%), Query Frame = 0


Query: 241 LVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 300
           +VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 60

Query: 301 DGKKTISTSVGAKDHLKFLASYSTILKAHMTALKKRERKDKKKAPEAEKDLKKKPRK 358
           DGKKTISTSVGAKDHL+F ASYSTILKAHMTALKKRERKD+KKAPEAEKD KKKPRK
Sbjct: 61  DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDRKKAPEAEKDSKKKPRK 117

[Close]

BLAST of Lcy11g017500 vs. NCBI nr
Match: KGN66307.2 (hypothetical protein Csa_023187 [Cucumis sativus])

HSP 1 Score: 208.4 bits (529), Expect = 1.0e-49
Identity = 112/119 (94.12%), Postives = 116/119 (97.48%), Query Frame = 0


Query: 239 VSLVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIR 298
           +++VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIR
Sbjct: 82  IAMVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIR 141

Query: 299 ATDGKKTISTSVGAKDHLKFLASYSTILKAHMTALKKRERKDKKKAPEAEKDLKKKPRK 358
           ATDGKKTISTSVGAKDHL+F ASYSTILKAHMTALKKRERKDKKKA EAEK LKKKPRK
Sbjct: 142 ATDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRK 200

[Close]

BLAST of Lcy11g017500 vs. NCBI nr
Match: KAG6583884.1 (Signal recognition particle 14 kDa protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 207.6 bits (527), Expect = 1.8e-49
Identity = 115/135 (85.19%), Postives = 125/135 (92.59%), Query Frame = 0


Query: 223 ILLKNKNTIAISSLVVVSLVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRN 282
           I+L   +T A++  + +++VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRN
Sbjct: 43  IVLLKIHTTAVA--IAIAMVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRN 102

Query: 283 KMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLKFLASYSTILKAHMTALKKRERKDKK 342
           KMTTAGQPIEYRCLIRAT+GKKTISTSVGAKDHL+F ASYSTILKAHMTALKKRERKDKK
Sbjct: 103 KMTTAGQPIEYRCLIRATNGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKK 162

Query: 343 KAPEAEKDLKKKPRK 358
           KA EAEK LKKKPRK
Sbjct: 163 KAAEAEKGLKKKPRK 175

[Close]

BLAST of Lcy11g017500 vs. TAIR 10
Match: AT2G43640.1 (Signal recognition particle, SRP9/SRP14 subunit )

HSP 1 Score: 174.9 bits (442), Expect = 1.2e-43
Identity = 90/109 (82.57%), Postives = 102/109 (93.58%), Query Frame = 0


Query: 241 LVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 300
           +VLLQLDPFLNELTSMFE+S EKGSVWVTLKRSSLKSKVQ+ K+++ G+ IEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFEKSKEKGSVWVTLKRSSLKSKVQKRKLSSVGESIEYRCLIRAT 60

Query: 301 DGKKTISTSVGAKDHLKFLASYSTILKAHMTALKKRERKDKKKAPEAEK 350
           DGKKT+STSVGAKDH +F ASY+TILKAHMTALKKRERKD+KK+ EAEK
Sbjct: 61  DGKKTVSTSVGAKDHQRFQASYATILKAHMTALKKRERKDRKKSTEAEK 109

[Close]

BLAST of Lcy11g017500 vs. TAIR 10
Match: AT2G43640.2 (Signal recognition particle, SRP9/SRP14 subunit )

HSP 1 Score: 174.9 bits (442), Expect = 1.2e-43
Identity = 90/109 (82.57%), Postives = 102/109 (93.58%), Query Frame = 0


Query: 241 LVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 300
           +VLLQLDPFLNELTSMFE+S EKGSVWVTLKRSSLKSKVQ+ K+++ G+ IEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFEKSKEKGSVWVTLKRSSLKSKVQKRKLSSVGESIEYRCLIRAT 60

Query: 301 DGKKTISTSVGAKDHLKFLASYSTILKAHMTALKKRERKDKKKAPEAEK 350
           DGKKT+STSVGAKDH +F ASY+TILKAHMTALKKRERKD+KK+ EAEK
Sbjct: 61  DGKKTVSTSVGAKDHQRFQASYATILKAHMTALKKRERKDRKKSTEAEK 109

[Close]

BLAST of Lcy11g017500 vs. TAIR 10
Match: AT2G43640.3 (Signal recognition particle, SRP9/SRP14 subunit )

HSP 1 Score: 147.5 bits (371), Expect = 2.0e-35
Identity = 80/109 (73.39%), Postives = 93/109 (85.32%), Query Frame = 0


Query: 241 LVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 300
           +VLLQLDPFLNELTSMFE+S EK         +SLKSKVQ+ K+++ G+ IEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFEKSKEK---------ASLKSKVQKRKLSSVGESIEYRCLIRAT 60

Query: 301 DGKKTISTSVGAKDHLKFLASYSTILKAHMTALKKRERKDKKKAPEAEK 350
           DGKKT+STSVGAKDH +F ASY+TILKAHMTALKKRERKD+KK+ EAEK
Sbjct: 61  DGKKTVSTSVGAKDHQRFQASYATILKAHMTALKKRERKDRKKSTEAEK 100

The following BLAST results are available for this feature:

BLAST of Lcy11g017500 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04421	1.7e-42	82.57	Signal recognition particle 14 kDa protein OS=Arabidopsis thaliana OX=3702 GN=SR...	[more]
O04433	2.6e-35	67.52	Signal recognition particle 14 kDa protein OS=Oryza sativa subsp. japonica OX=39...	[more]
P37108	7.8e-16	45.37	Signal recognition particle 14 kDa protein OS=Homo sapiens OX=9606 GN=SRP14 PE=1...	[more]
Q4R5C7	7.8e-16	45.37	Signal recognition particle 14 kDa protein OS=Macaca fascicularis OX=9541 GN=SRP...	[more]
Q5RBX7	7.8e-16	45.37	Signal recognition particle 14 kDa protein OS=Pongo abelii OX=9601 GN=SRP14 PE=2...	[more]

BLAST of Lcy11g017500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K2P1	2.3e-50	95.73	signal recognition particle 14 kDa protein-like isoform X1 OS=Cucurbita maxima O...	[more]
A0A6J1GR82	2.3e-50	95.73	signal recognition particle 14 kDa protein-like isoform X1 OS=Cucurbita moschata...	[more]
A0A6J1KGP7	1.1e-49	95.73	signal recognition particle 14 kDa protein-like isoform X1 OS=Cucurbita maxima O...	[more]
A0A0A0LYE0	1.1e-49	95.73	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G534730 PE=3 SV=1	[more]
A0A1S3BBI8	1.1e-49	95.73	signal recognition particle 14 kDa protein OS=Cucumis melo OX=3656 GN=LOC1034878...	[more]

BLAST of Lcy11g017500 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893990.1	2.7e-50	96.58	signal recognition particle 14 kDa protein isoform X2 [Benincasa hispida]	[more]
XP_038893989.1	3.6e-50	97.41	signal recognition particle 14 kDa protein isoform X1 [Benincasa hispida]	[more]
XP_022954536.1	4.7e-50	95.73	signal recognition particle 14 kDa protein-like isoform X1 [Cucurbita moschata] ...	[more]
KGN66307.2	1.0e-49	94.12	hypothetical protein Csa_023187 [Cucumis sativus]	[more]
KAG6583884.1	1.8e-49	85.19	Signal recognition particle 14 kDa protein, partial [Cucurbita argyrosperma subs...	[more]

BLAST of Lcy11g017500 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G43640.1	1.2e-43	82.57	Signal recognition particle, SRP9/SRP14 subunit	[more]
AT2G43640.2	1.2e-43	82.57	Signal recognition particle, SRP9/SRP14 subunit	[more]
AT2G43640.3	2.0e-35	73.39	Signal recognition particle, SRP9/SRP14 subunit	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003210	Signal recognition particle, SRP14 subunit	PFAM	PF02290	SRP14	coord: 244..333 e-value: 2.1E-21 score: 76.3
IPR003210	Signal recognition particle, SRP14 subunit	PANTHER	PTHR12013	SIGNAL RECOGNITION PARTICLE 14 KD PROTEIN	coord: 189..349
IPR009018	Signal recognition particle, SRP9/SRP14 subunit	GENE3D	3.30.720.10	Signal recognition particle alu RNA binding heterodimer, srp9/1	coord: 241..357 e-value: 1.4E-36 score: 127.9
IPR009018	Signal recognition particle, SRP9/SRP14 subunit	SUPERFAMILY	54762	Signal recognition particle alu RNA binding heterodimer, SRP9/14	coord: 242..336
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 333..358
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 339..358
None	No IPR available	PANTHER	PTHR12013:SF3	SUBFAMILY NOT NAMED	coord: 189..349

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g017500.1	Lcy11g017500.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007186	G protein-coupled receptor signaling pathway
biological_process	GO:0006614	SRP-dependent cotranslational protein targeting to membrane
cellular_component	GO:0005786	signal recognition particle, endoplasmic reticulum targeting
cellular_component	GO:0048500	signal recognition particle
molecular_function	GO:0008312	7S RNA binding
molecular_function	GO:0030942	endoplasmic reticulum signal peptide binding