Lcy11g017430 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g017430
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	CCHC-type domain-containing protein
Location	Chr11: 43294752 .. 43309683 (-)
RNA-Seq Expression	Lcy11g017430
Synteny	Lcy11g017430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCTTTGGGACTGGGTTGGTACCCGTTGATGGTTGGCTTCAGATGCATCCAACGAAGATGGAAGGTCTGCTGGTTGGAAGCCTTAGTAATCTGTGAAGGCCTTCGTGTGATATCGAGCGAAGCACCCAAAATTTGCGTGGAGATGGATGCTATCCAAATCGTGCACCTTCTCTCTAATGAGGAACAAGACCTTACAGAGCTCTCAAATTTTATTGTCGATGCCCAAGGACTTTTGGATTCTCACAAAAACGAGTCAGTTGGGTATATCTCAAGAAATCATAACAGGATGGCACACATAATAGCTCAAAAAGCGTGTGAATTGAAGTCATCTGAGATGTGGACTAATCTCTTTTCTGATTGGTTAGTTTCTTTTAATGAGGAGGCAGAAGATGGCGCAGGGTTTGGATCCATGGGGGATGGCAGGGACGTAGCCACCAATAATAATGACGGTTTGAGGAGCGCGGGAACATGTCACTACAAGGGGGTTGAACATGCACGTGACCCTCGTAGTGTTGAAATAGTTGGTATGCCGGGCCGAAGCGCGGAGGTACCTAGGGAGGAGGCCAATATTGCGGGGATCCGTCGACGTTGCTGACGTCGAGCAGACAGTTGTGAACGCTTCGGCCAACAACATTCGGGAGGGTGAAATGTTTTTCAGTAAGGATGAAGTAAAGATGAGGTTTAGCAACGTTTGCAATGAAGAACAACTTCGAATATCGTACCTTGAAATCGAAAAAGTCCAATATACCGTGCGATGCACGGATGACAACTGCAATTGGCAGGTTCGGGCTACTAGGCTTGAGGGTAGTGACGTATTCACCATTACGAAGTATGTCAGCACTCACACGTGCTCTATTGAGTTGTTGAATCACGACCACCGACAAGCTAGTGCTGGTGTGGTTGGCCACCTGATAAAGCAGCGACTAGCCGGTGTCGGTCGTGTATACAAGCCTCGTCATATTATCGAGGACATGCGACAACAATACAGGATGAATATAAGCTACGACAAGGCATGGCGCGCAAGGGAACGTGCTTATGCACTATCAAGGGGTTCTCCAGTAGAGTCTTATGGTACGCTGCAAGCTTATGGAGAAGCTCTTAAGATTGCGAATCCGGGGACGTTGTTTGAGGTTGAATTAGAAGATGGCCTTTATTTCAAGTACACTTTCATGGCGTTAGGAGCTTGCTGATAGCGAGCATAGCTAGCTATTTTTCTCTGATTAATTAAGCTAGTATTTTACAATTATTTGCCCAAATTTATGCATTTTTATGTTTTATTTGTAGGAAGTATGTGTTTGAAGTTTAATTCAGCAATTGGAGTCAAATGGAGTCTTCAATCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTCATAGCGTCGCGACGCTATAGGCAAAATTTCCAAAAATGCGGTATCGCGACAGCGTCGCGACGCTGTCCATAGCGTCTCGACGCTGTCGCCAGATTTTCTATAAATTCATCTTTTCATGCTACGGCCAAGGAGAGTCCAATTGGTTAGATTTTAGCCCTAATTTCGACTAGAGACTTTTGGTGGGAGCTGAAGCAAGGCCAAGGAGCGGGAATCAAGCGAGAAGATGTGGAGATCGTGACGGGGACGTGCCGGTTTCGACGGATTCGAGTTTTCCTTTCTCTTTCCCTTAACTCTTGTAGTTTTTATGGCTTTTCTTGCAATTAGTGTTTATGGTTTAAAGACTATGAATTTCTAGTTGTTTGTCTTAGAGATTGATGTAGTTGTTTTAGTTGTTGGATTGATTTTTGGTATGAATGTGCTTTTATTTTATGCATGCAATTTTGTGTAATGCTTTCAATTACTTGATCACTAATTGAATGATTTAAGTGTTGAATCTAACTCGGGAGAGAGGATTTGGCCTAAGACTTGGTTTGTTCAATTGCATGACTAGAGTAGAAATTCTAAGTTTGTGACGGGATTTAGGATATCTCTAGAAGTATAACAAGGACCGAACCGAATAATGCCTTGCATGTTAATGAACTTAGATAGGGATATCAAGTTAGTTATATGCATGAGAATCAATTATACTCGGGAGAGGTAATCGTGATAAATGTTTCCTTGGCTTGTAGAATAATTGCACGGTCAATTCATTCCTATTAATCAATCCTCAATCTTAATCAACGAAATCAATTCCCTATGAGTCTTTCCATTTGAGTCTCCACCTTTATTTTATGCTTTTTGTCTTTAGATTTATCTTTTATCATTGAGTTTTGCTCCCTAAATAAAATTGGACAAGATTATTCACGGTACTTAATTTGCTAGAAAACCAATCCAGAGGACGACACTCGCTTTACACGAAAACACTATATTATTACTTGACCCGTACACTTGCGGTAAGCAAATTGCGCATCACTTGCATCCAAGGATACGCCAGTTGTCGGCCAGTTATTGTGGTAGACGGTTCCCACCTGAAAGGGAAGTACAATGGGACCATGTTGATCGATGTAGTTCTAGACAGAAACAACCAAGTGTTTCCTCTAGCCTACGCAATCGTGGACAAGGAGACCGATCGGTCATGGACATGGTTCGTGTAGAATCAAAGATTGTGATAAGAGAGGACGCAAGAATGATGTTTGTTTCTGACCGCCACATGTCCATAGCAAATTCGGTGGGTGAGGTATTTCCCAACGCATTTCATGCAATATGTACTTACCACCTGGAAAGCAACGTGATAAAAAAATTCAAGAATAAGACCGTCACGAAGTTTTTCAAGAAGGTTGCGAGAGCTATCCGTTTAACTGATTTCCAGAGGTACTGGCAACAGATATCGCAATTGAGGGGGGTGTCGTTGCAGATTATCTGAATGAGATCGGAATTGAAAGGTGGTCCCGATGCCATGAAACACATAGGCGGTACGACAGCATGACCAACAATGAGGCTGAGTGCTTCAATGCCTTAACCGTGGAGACCAGACTATTGCCAATCACTGCTCTGTTAGACCACACACGGGGGATCGTACAGACGTGGTTTTACGAGTGGCGCAACTACTGGGCATCTCGAACTTCCACGCACTCAAACTATGCACTGGAGCGGATGACATTCGAGCTGGAAAGGGGGAGACGGTATCCGGTTGAACCGATAGACTGTTATCGACTAAATGTACGGGATGACTGTAGACCCCTAAATTTGTCCGGAATTTTATTCTTTTAATTGATTTTGTCTTTTTAAAAAATAATAAATAAAAGAAAAAAAAGTGTTCTAGAGTTTTTAAATAGCCCAATCATATTTATTAATTTTTGGTGAGAATAATTAGGTCAAATATTTTATTTTAATTAATTGATTTGTCAAATCAAATATCAGGTTTATTTGGCAAGTTTTAATTAATCAAAATATTTTGTTTCCTTAAAGGATTGATTGGCAATTAAAATTTTGTAAATATGGGAGATAAAATTTGAGTATTTATTTGTTTCTTCTTTTATTTTATTTTATTTTATTTTTAATTTTATTTGATCACATTCCTAATATGTTGTGGTTAGAATTGGCTATAAATAGGGATCCCATCACCCTTGCTTTTCACGATTTTTGGGGCCTTGTAGTACCCTCTACACGTTTTTTTTGGGCTAAAAATAGGCTCCCAAATTTCTCTCCCTTCAAACCCTAGATACACTTTCCTCCCTTTTCCACCTAACTTCCCTCCCCCTTTCCCACCTAACTTCCCTCTCATACTATAACGCTTTCTCTTTTCCTCTCCAACGATTTCACCCCCTCACCATCACCCTCTCTCTAAATTTCACGTCGCCACTTCTCCAAGTCTTATTCTCAATCCAACGGTCACACATGTTTTTTTACCATTTTAGCATATTGTTGGGTGCCCAGTCACACCCTCTAAATCAAGACTGGTGGCGACTCCATTTTCCTCCTCTTGGGAACAAAGTCGGCCGCTCCGCGTCGCAAACCCGTAGCGACAGCTTGGCGACTCCACTGGGGACCTTTTTTTTTGTAAGCGGGTCATTTTATTTTCTTGTGTTGTTATTTTTTTTATATATTGGCTTTTTTTTGTATTTATTCTCCTTTTAAGCACACACGTACACAAGCCTCCTACCCGGGCTTTACCATTAGGATTAGGATCGAGGATGAGTAGTGGCGACCTTCGTGGAGTTATAACTCCCGTGTAGGCACATGAAAACCCTCACTCAAGTCGACCTTATTCAGGATGCTGATAAGGGTGCCTCTGATTTATTTTCTTGAAAAAGGAAAGGAATCAAGGACAGCTTGGGGACCTTTTTCCGTTAGACATTAGAGCCTTACCACACGTGTTATGATATAATCCATTGATTTATTTTAATTATGTGTATGTTATTTAATTTACTTTAGCTTAACATCTTTATTTATATCCTTGATTTAGCATATTTTGATAATACACATTTATAAATGCATTCTTCATGTTTTCCTTTCATATTTTCCCTCATATTTAATTATTTTTATGTTAAAAAGATCTTTTATTTTGTCGCTACATTCTCATATTAGTTACATGCTCATCATTTGTTGTACAAAAAAAATGGCAAAAAAAAAAAAAATGGCAAAAAAAAAAAAAAAAAAAAACAAACAAACAAACATTCAAACTTTATTACTTGAGATTTTGAACGATTTTAGATAAACCAAATATTGAGGTTGCAATAGAAAGAGAAAACCGATAATCACAATTGAATGTCAGAAACTATGCATCAATGGTTCGAACAAATGCAAGCAAAATGTGGGAATGCTTTGTTGAAGGATGTTTTAGATCAACCCCCAGCAACCAACATCTTTAGTCATACTATTCTAAGCATAAGGAAGCTAAAAGAGATTTGGGGAGGAATTAAAACCAGAGCATAGGATATCATTCATGAAAAGATATGAGCACATGACAAGTCTTTTATATGTTCAAATTGATGAAAAATATCCTGGTGGCTGCATTATATTTTTGGGATCCAACTTACAAATGTTTTATATTCAATTCCCTCGTCATGACACCCACTGTTGAAGAATACCAGAGTTGTTTCGAATGGCAATGATGTTCGAAGAAAAAGCTTATTTTTTTCGACAAAAGACTGACTAGGAGAAGAGCTTTTGCAAGGATTATCGGTAATATAACTGCTGCTGAAATGGAACATCAACTCAAGAATAAAAGAGAAGGTGAAAGAGTATCTTTAAATTACCTCATAAGCCTTGTTCAACAACATAAGGAGGATGAGTTAAGCTTGAAGCTCTTTGTACTATGTATGTTTGGGTCAATCGTGTGTCCAAATGTCCAAGGAGAATAGCGGGGTAATCTTGTGGTGGTGTCCCAAGATTTCACATTGGGTCCCTGGCATTCAAGAAGGCGTTCTTGAAGAATTCCAGAGTCGCCCACGACGAAACAATATGATCATTAAATTTTTGTAAAATACGAGGGAAATGTAGATTTATCGGTCGCACTCCTCCATTAAATATCTGGTTGATGAGTCATTTGAGGTGTCCACTTAAGTTTGGCAATCCAGAAGTAAAATTCTCCAATCCATAAGACACTACAAACAACCTTATCATTGATTATGGAATAGTTGAACACAAAGCAAACGAGCCAAGTACAGAATCGTGGATGTCTTTTTTCGACAAACTTGGAAAATGAAGACATAATATGGAAAGTTGTGTGTGGATGCCTTTGCAGCCAGTAAAAGTGTGGTAAATTTCAAGATGTTCTACTGTTGGGCCCGTGGGGATGTACTAGTTATGCACTTCTTTTAGTTCTACGCCAAATGTGGTTAGAAAAATTCATCCATGTGACACGTGAGGTAGGGAATCTTGATTTTGATTACGAGCAGGAGGATTCAGGTCAAAAAATTTTGCAGGTGATAGAATCCTGGAAAAATAGAAAAAAAAGAAACATTGAAAAACATATGGATGTCTCCACTCTAGAATATAAATTATGGTACGAAGCTATTCAAACATCATGCAGAAAAAAAAAAAAAGAAGCAAATGTCACCACTTCAAAAGGAGCTCGGAAATGAAAGCACTGGCAAGAAGGCAGAAAATCTATTACTCCACCAAGAGAAAGGAAAGTTACTTCAAGAAATGAGTCAGTTGAAACGACAAGGGGTAGAAACAGAAAAGGGTTTATTAAGATAAGAAAGCTACTAAAGAATCAAATAAAGCTCGGGAAAGAGAATCAAGAGTTAGACTATATGCATCCAGAAAAAATGGTCAGAAAATCAAAAGAAAGAAATGAAGACTTGCATAAGGTTCTAAAAGAGAAATATGCACAATTTTCCAGTCTGGAAAGTTGTATTTCTTCTTTTTAACAACTCGTTTTGGAGCTAAACGCAATGATTGAAATGCAAGGTAAATAGGCGGTTGAATTTGAGAAAAGCAATAGTACATTGCAATGGACTATTGACAATTTGGAGCACCATATCCAGAAAGGTTAGAATGCAACAATGATACCGACAGAACATAAATAGTTGCAAGGAGATATGATTCACTTGTAAGTTACAAAGTTATTTCACTTGTAAGTTACAAAGTTATTTCAAAGGTCTTTCGGCAAGAAAACACAAGTTTAGTTCAAGATGGGGAAACACATAGACAATGTTGTAGAAAGAGTAATGGCTAAAAGAGTTGGGACATTCGTAGAGGCATTTCACAATTGCAGTCCAAGGGAGAAGAATTATGAACTTTGATATGGAATTATCCTACGTTAGTTGTCTCCCTTAGAGCAATGATGGTTTCTTTGAGTATTTTGGATTTGATCTAATATTTCGTTCAATTATTTCATTTAATAAAATTTGAAGTTTATTGTTTCATTTTTTGCACAACAATTTGGGCCAAAGGACATTTCATCTATTTTCATTCATTTCATTGCTTGTTTTTTTTTTTCCATCCTTTTAAGACTTCAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCAAAGTAACATTTTGCAATATAATCTTTTATAAAAAAAAAAATTAAAAAAAAGATCATTGTACATTTTTTTTTTTTTTTAAAAAAATATGACTTCCACGTTTTTTTTTTTCCTAGGTTTACTAAGTTTTTTTTAGGCCAATTAACTTAGTCTTTTTTTTTTTATAGACAAACATGAGATTTTAAACCATGTTTGGAAAAAGTGGAGTCCTTGTCTGAAAAAGAAAAGAAAGAAAAGCTAAAAAAAAAGAAAAAAAAGAAGAAAAAAATTGTGAATGTCATCATCAGCCCTTGATCAACCATACAAGCTTTTTGTCAAGACCTCTTCTGCTTGCAAGATCTCCTACTTGACCACCTTTTCTCCATAATATCCTTAAACTCATATCCCCATCACTCAATCCAGCACCCAATGTCTTTGACCCACCTTTCTTCCTAGACCTAACACCGCATTTTCTTCCCATGCAGACTTGAGCTTTGAGTTAAACAAAGACCTTATTAGCCTACACCATAACATTACAATGGGGAAATTAGTTATTTTTTTTCTTGATCTATACCATAATGCTACTATAGTGGGGCAATTTGTTGTTTTCCTTATTCTTACCCATATATCTACCAACTTTGCAAAACCCATGCTCATATATTATACGATGACTTTAAAAGTAACAAATAGTATTTATCTCTTATTGGCACTATTTCAAGTCATGATGCGAATTGCAATTTGATCTATTATTCTTACACCCTTCTTTGTCGTACCATCAAAATCCACATACGATTCATTTGAATGTGTCATCTTATCCTCCATCCCATTTTTCATCTTTCTTTGATTAAAGTGAGTCGATCTTATATTTCATAGTTGGGTCAATCCTATTTTTCATCTTCTCTTGAGTCGATCCTATTCTTCATCTTTCCTTGATTAGAGTTTAGTCCATCATATTCTTCATCTTTCCTTGATTAAAGTGATTCAAACCAATTTTTCATCTTCACTTAATTAAGGTAAATCAATCCTATTTTTTTTTTATCTTCTATTGATCAAAGCGAGTCAATTCTATTTTACATCCAACAGTTATCAAAGGGAGTCAATCATTTCTTTTTATCCTTTTTATCCTCCCTAGATTAAAGTGAGTCATTTTCTGAAAACAATAAATCTAAGGCTTTATGTGTTGGTAACCTTAGAGTAAATCTCATTGAAGAGCTAAGTTCAAATGCAAGCAGATAATATGTTCACGATCGATTTGGGATTATCTTTGAAGCCGGAAGCTTTTGTACGAGGAAAAGTACTGCAAAGTAGGTTAATCTTCAAAAGAGGGAAGACATAATGGAAGCAGGAAATGAAAGAAAAGAAAAGGTGATACACTTTGACAAATGAACATTCCATGTCTCAAGCAGTGAAGTTATATTGAAGAACAAGGTTGAAGATCAAAAATGAAAGACACATATGTCAAAGATTCAGGTCAAGGCATCTTAATTCAGTGATCATAATGATAAGCTTTGAAATTCTCATTTTGTGGTTTTCTCTCGAAGTATGTGCAGATCCAGGTATTGATTCTCAAAACAAGTGAGATAGAAAATAGTCCTTGCAACAAAAAAAAAAGAAAAAAAAAAGCAAAAAGCAAAAAAAAAAAATAGAAAAAAGAAAGAGAAAAAAAGAAAAAAAGAAAAAAAAAAAAAGAAAAAAAATGCAAGGACCAGGGAGTTCGATGGTGATACTTTTGGGTTTGGCCATTATATTTCTTTAATGTTGAAGCAAAGATATCTCAAATGACGTGCATATGATTGATGCATCATTTCTTATTGAGAAATGCATAAGTAAGCTTGACGCAGATGCTGGGGCAATCGCAACATATGAGGCTATTATGGCAAATGTCAAAATATGAAACAAATGTCAGGTGACAAAATCACCATGTTACGCATCTTTTACTCAATTTTGGCAACGGGCAAAACTTTTTTCTTCAAATAGCGAGTAAAAAGACATTGGAGTTCTCTTCGGAGTTATCCAAATTGACATAAGAAGAAGTGATACCCTTACATGACTATTGACTACTTGAAGTACTTAATTGAAGAATACAAATGTCTACGCAAAAAGTCATATGATCAGTTGTAGCAATAGTCATTTCATCAACCCCAAGACCTTAACTGGGGCAATAAAGTGTTTTAGATGAAAAGAAGTTTTTCTCAATAAGGATCGAAGCTAGGTGATTGCAAACAGATCACACGGGCATGTCATTCCTAATCAGTTTATCAAGAAGCCACTTAAGAAGAAAGATAGCATTGACAAAAGCAAAGGTGACTCATTCTTTGAAGAAAATTATCATTTGCTGGAAGAAATATATGAGTTAGAACATTATAAGTGGCTTGAGGAGTTTGTTACATCGAACTTGAGCCAACAATCATATGCTTACCAACACATTTGATCAATCTATGAGATAAATCTTGGGAAGCTAAGCATCAAGTTTTAGAGGAGTTGTTTAAGGAATGATTTCACTTTCATCTCCCTTTCGGTTATATCTTCGTTTTCCCACATTTATACTTCTTAAGCCCCATTTGTCAACTTTTTCGTGTCTCATGCTTCTTTCATCCAAATACTACTGTGAGAAACGATAGTTCCTCGTTCTCGTCATCCACGTTGGTCTTTATTTGTTCGTCCTTCTCAGGTCTTGAATTTGAAAGTAGCTCATTCAACTTATTATCTTTTGAGATCATGTCATTCCCATCATATGCTTGATATTTCCAAATAGAGATTGTGCTATAAGTTACCTTTATTAGTCATTCAAATAGTATATGAGACCATTTTAGTCCATCATATCCCATCATGTCTATTGTAAATAGTCAAGCTTATCCATTAGAGCATCTTTGTAACAACAAAAAGAGTTGCAACAATATCAAAATGAGGGCATTCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGACAAAAAAAATGTGCAACAAAAAGAAAAGGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAATTTTTAGACAAGGATAAAGTTATTTCCTCATGATTTAATATCACTTGATAGTCTATAAAGAAGTATGAGAATAAGTAAAATTAGCCGCCTTTCTTTTTTTTTCTTAAAAAAAAAAAAAGCACAGATACACACACACAAATTTTCTTCTTTCTGAATAAAGCTTTGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCACAAAAAAATCTTGCATAAATACTGGGGCAAATTGCAGATAAGAATGTCTATTGGAAGACATTTATCAAAAGAACCCCTTCATGATTTGATTCTTGTCTTTAAAAGGATGAAAACTTCTTTAAAAAAGTTACTTTTCTTGAAACTATGCTTTAAACTTCATTAATAAACACTAGGGCAATTTTTGGATGAAAGTCCGTATCACAAAGTGTTTTATTATGAAAAAACTCATGCATTCATAAGCATTGTAGGTTAAAATTTTGTCCGTGGAAGTTTTCTCACCATTTTAATACATCATCGGGTGCTTGTTTACCCTTGACCCGATACCTTTATCATGGAGGTGCTTGTTTACCCCTGGCCTCCAGCCCTTTTAATACATCATCGAGTGCTTGTTTACCCCTGGCTCGATACCTTTATAATGGAGGTGCTTGTTTACCCCTGGCCTCCAACCCTTTTAATACATCATTGGGTGCTTGTTTACCCCTGGCCCGATACATTTATCATGGAGGTTCTTGTTTACCTCTGGCCTCCAGCCCTTTTAATACATCATCGGGTGCTTGTTTACCCCTGGCCCGATACATTTATCATGGAGGTGCTTGTTTACCCCTGGCCTCCAGCTCTTTTAACACATCATCGAGTGCTTGTTTACCCCTGGCTCGATACCTTTATCATGGAGGTGCTTGTTTACCCATGACCTCCAGCCCTTTTAATACATCATCGGGTGCTTGTTTACCCCTGGCCCGATACATTTATCATGGAGGTGCTTGTTTACCCCTGACCTCCAGCTCTTTTAACACATCATCGAGTGCTTGTTTACCCCTGGCTCGATACTTTTATCATGGAGGTGCTTGTTTACCCCTGGCCTCCAGCCCTTTTAATACATCATCGAGTGCTTGTTTACCCCTGGCTCGATACCTTTATCATGGAGGTGCTTGTTTACCCCTGGCCTCCAGCCCTTTTAATACATCATCGGGTGCTTGTTTACCCCTGGCCCGATACATTTATCATGGAGGTGCTTGTTTACCCCTGGCCTTCAGCCCTTTTAATACATCATCGGGTGCTTGTTTACCCCTGGCCCGATACATTTATAATGGAGGTGCTTGTTTACCCCTGGCCTCCAGCTCTTTTAACACATCATCGAGTGCTTGTTTACCCCTGGCTCGATACCTTTATCATGGAGGTGCTTGTTTACCCCTGGCCTCCAGCTCTTTTAACACATCATCGAGTGCTTGTTTACCCCTGGCTCGATACCTTTATCATGGAGGTGCTTGTTTACCCATGACCTCCAGCCCTTTTAATACATCATCGGGTACTTGTTTACCCCTGGCCCGATACATTTATCATGGAGGTGCTTGTTTACCCCTGACCTCCAGCTCTTTTAACACATCATCGAGTGCTTGTTTACCCCTGGCTCGATACCTTTATCATGGAGGTGCTTGTTTACCCCTGGCCTCCAGCCCTTTTAATACATCATCGAGTGCTTGTTTACCCCTGGCTCGATACCTTTATCATGGAGGTGCTTGTTTACCCCTGGCCTCCAGCCCTTTTAATACATCATCGGGTGCTTGTTTACCCCTGGCCCGATACATTTATCATGGAGGTGCTTGTTTACCCCTGGCCTTCAGCCCTTTTAATACATCATCGGGTGCTTGTTTACCCCTGGCCCGATACATTTATAATGGAGGTGCTTGTTTACCCCTGGCCTCCAGCTCTTTTAACACATCATCGAGTGCTTGTTTACCCCTGGCTCGATACCTTTATCATGGAGGTGCTTGTTTACCCCTGGCCTCCAGCCCTTTTAATACATCATCGAGTGCTTGTTTACCCCTGGCTCGATACCTTTATCATGGAGGTGCTTGTTTACCCCTGGCCTCCAGCCCTTTTAATACATCATCGAGTGCTTGTTTACCCCTGGCTCGATACCTTTATCATCGAGTGCTTGTTTACCCCTGGCTCGATACCTTTATCATGGAGGTGCTTGTTTACCCCTAGTCTCCAGCCCTTTTAATACATCATCGAGTGCTTGTTTACCCCTGGCTCGATACCTTTATCATGGAGGTGCTTGTTTACCCCTGGCCTCCAGCCCTTTTAATACATCATCGAGTGCTTGTTTACCCCTGGCTCGATACCTTTATAATGGAGGTGCTTGTTTACCCCTGGCCTCCAGCTCCTTTAATACACCATCGGGTGCTTGTTTACCCCTGGCCCGATACCTTTATCATGGAGGTGCTTGTTTAGCCCTGGCCTCCAACTCCTTTAATACATCATGGGGCGCTTGTCTATCCCTGACCGTCCCCAAAATTTAACAATTTAACGTTTACCCCTGGCTGTCCCAAAATTTAACAATTTAGTGTTTACCCCTGGCTGTTTCCAAACATTTACGGTTTAGTGTTTACCCCTCGCCGTTCCAAAATTCTTTCGATTTAGTGTTTTCCCCTATTTATTTCCCCAAAAAAAAAAAAAAAAAAAAAAGCTTAAATTTTACCATTGGTTGTCTATTTATTTTGCTAAATATAAAATTTCGAACAAATAAGGTCTACACCTTTGTCCATCCTTTTATTCTATAAGAATGAACAAAGGGGGGCAAACTGTAGACCCCTAAATTTGTCCGAAATTTTATTCTTTTAATTGATTTTGTCTTTTTAAAAAATAATAAATAAAAGAAAAAAAAGTGTTCTAGAGTTTTTAAATAGCCCAATCATATTTATTAATTTTTGGTGAGAATAATTAGGTCAAATATTTTATTTTAATTAATTGATTTGTCAAATCAAATATCAGGTTTATTTGGCAAGTTTTAATTAATCAAAATATTTTGTTTCCTTAAAGGATTGATTGGCAATTAAAATTTTGTAAATATGGGAGATAAAATTTGAGTATTTATTTGTTTCTTCTTTTATTTTATTTTATTTTATTTTTAATTTTATTTGATCACATTCCTAATATGTTGTGGTTAGAATTGGCTATAAATAGGGATCCCATCACCCTTGCTTTTCACGATTTTTGGGGCCTTGTAGTACCCTCTACACGTTTTTTTTGGGCTAAAAATAGGCTCCCAAATTTCTCTCCCTTCAAACCCTAGATACACTTTCCTCCCTTTTCCACCTAACTTCCCTCCCCCTTTCCCACCTAACTTCCCTCTCATACTATAACGCTTTCTCTTTTCCTCTCCAACGATTTCACCCCCTCACCATCACCCTCTCTCTAAATTTCACGTCGCCACTTCTCCAAGTCTTATTCTCAATCCAACGGTCACACATGTTTTTTTACCATTTTAGCATATTGTTGGGTGCCCAGTCACACCCTCTAAATCAAGACTGGTGGCGACTCCATTTTCCTCCTCTTGGGAACAAAGTCGGCCGCTCCGCGTCGCAAACCCGTAGCGACAATGACTACCTTGACGGGCTTGCCAACCTTAACACGCGTAAATGCACGTGCAGAAAGTTTGACTACATGGAGATACCATGTTCGCACGCGATGGCGGCCGCACGATATCGTAATGTCCCCGCGTCCAGCCTATGCAGTTCGTTCCTACTCCGTTGATTGTCTAATTGCTGCATACGCGCAGCCAGTCAATCCGGTTGGATTCTCACAAAAACGAGTCAGTTGGGTATATCTCAAGAAATCATAACAGGATGGCACACATACTAGCTCAAAAAGCGTGTGAATTGAAGTCATCTGAGATGTGGACTAATCTCTTTCCTGATTGGTTAGTTTCTTTTAATGAGGTTGATACATGTACTGGGAATCATAATAGTGGAGGAACCTGACCCACCAGTGGCAGTGATTTCCTTTTGGAAGCAATTGCCCATTCTTAATAAAAGTATTTTCTTCACCTCAATAATACTCTTCCCAAAAAAACTCCTGTCAGCGTACAGGCTCTCTCTCGATATGAGAGGTAGGGTTTTAGTTTAGGTTTAGTTCTGGTTGTGCGGCGACTTAGTGTTCTGGTGGTGCGGCGGCTTAGGGTTCTAGGGCGGCAGCGTTTTTTGGGTTTGCGGCGGTGATGGCTGTGGTCGGCGATGGGGCTTTTGATGATCTTGTTGAACGATGGAGCAGTATGGGTCTCTCGGAGGAGGAGTCGAAGGCGGTGCCGGTGCCGGAGAATGTCCCTCTACTTGACGACGCGACTGTTCAGGTATGCGCAGTGTGGAAAGTTTTGACGAGCCGATTTGTTAACCCTGATGCGTTAAGGAGAGTGATGTTGTCGGCCTGGAATGCCCATCGGTCTACTCGGATCGAGCCTCTAGGCGAAAACCTTTTTGTGATCCAGTTTTTTTCTGTAGGTGAGAAGCGACGTGTATTGACGTCAGGACCGTGGAATTTTGATAAAGCGCTTTTTGTCCTGGTCTCTCCCTCTGGTGCTGATAGTCCGACACTCATTGACTTCACAAAGTGTGCCTTTTGGGTGCATATCAATAAGGTACCGTTGAATTTCCTTACCCCTGCGATGGCTCGTGCTCTTGGCAGTGTTATTGGCCCAGTGGGGGAGGTTTCGGGCGAATGCTGCGGGGATTGGATTGGTCCTATCATGAGGGTGCGAGTTGTTTTGGATGTTACGAGACCATTGCGTCGGGTGGTGCGGTTTCAAGAAGGTGTGGAGACGTTCAGGTGGTGCCCAATTCAGTACGAACGTCTTTCGGATTTTTGCTTTAGGTGTGGCTGCATAGGCCATTCCCATCGCGAGTGTTCCGCTGAAAATTTGCCGAATGTGACTGAGGGCCTTTTCCCTTTTGGGGACTGGCTTTGTGCCCAATCTCTCAGGCGGCCTATTTAG

mRNA sequence

ATGGATTCTTTGGGACTGGGTTGGTACCCGTTGATGGTTGGCTTCAGATGCATCCAACGAAGATGGAAGGTCTGCTGGTTGGAAGCCTTAGTAATCTGTGAAGGCCTTCGTGTGATATCGAGCGAAGCACCCAAAATTTGCGTGGAGATGGATGCTATCCAAATCGTGCACCTTCTCTCTAATGAGGAACAAGACCTTACAGAGCTCTCAAATTTTATTGTCGATGCCCAAGGACTTTTGGATTCTCACAAAAACGAGTCAGTTGGGTATATCTCAAGAAATCATAACAGGATGGCACACATAATAGCTCAAAAAGCGTGTGAATTGAAGTCATCTGAGATGTGGACTAATCTCTTTTCTGATTGGTTAGTTTCTTTTAATGAGGAGGCAGAAGATGGCGCAGGGTTTGGATCCATGGGGGATGGCAGGGACGTAGCCACCAATAATAATGACGGTTTGAGGAGCGCGGGAACATGTCACTACAAGGGGGTTGAACATGCACGTGACCCTCGTAGTGTTGAAATAGTTGGTATGCCGGGCCGAAGCGCGGAGTTGTCGGCCAGTTATTGTGGTAGACGGTTCCCACCTGAAAGGGAAGTACAATGGGACCATGTTGATCGATGTAGTTCTAGACAGAAACAACCAAGTGTTTCCTCTAGCCTACGCAATCGTGGACAAGGAGACCGATCGGTCATGGACATGGTTCGTGTAGAATCAAAGATTGTGATAAGAGAGGACGCAAGAATGATGTTTGTTTCTGACCGCCACATGTCCATAGCAAATTCGGTGGAGGTACTGGCAACAGATATCGCAATTGAGGGGGGTGTCGTTGCAGATTATCTGAATGAGATCGGAATTGAAAGGTGGTCCCGATGCCATGAAACACATAGGCGGTACGACAGCATGACCAACAATGAGGCTGAGTGCTTCAATGCCTTAACCGTGGAGACCAGACTATTGCCAATCACTGCTCTGTTAGACCACACACGGGGGATCGTACAGACGTGGTTTTACGAGTGGCGCAACTACTGGGCATCTCGAACTTCCACGCACTCAAACTATGCACTGGAGCGGATGACATTCGAGCTGGAAAGGGGGAGACGGTATCCGGTTGAACCGATAGACTGTTATCGACTAAATGGTTCTAGGGCGGCAGCGTTTTTTGGGTTTGCGGCGGTGATGGCTGTGGTCGGCGATGGGGCTTTTGATGATCTTGTTGAACGATGGAGCAGTATGGGTCTCTCGGAGGAGGAGTCGAAGGCGGTGCCGGTGCCGGAGAATGTCCCTCTACTTGACGACGCGACTGTTCAGGTATGCGCAGTGTGGAAAGTTTTGACGAGCCGATTTGTTAACCCTGATGCGTTAAGGAGAGTGATGTTGTCGGCCTGGAATGCCCATCGGTCTACTCGGATCGAGCCTCTAGGCGAAAACCTTTTTGTGATCCAGTTTTTTTCTGTAGGTGAGAAGCGACGTGTATTGACGTCAGGACCGTGGAATTTTGATAAAGCGCTTTTTGTCCTGGTCTCTCCCTCTGGTGCTGATAGTCCGACACTCATTGACTTCACAAAGTGTGCCTTTTGGGTGCATATCAATAAGGTACCGTTGAATTTCCTTACCCCTGCGATGGCTCGTGCTCTTGGCAGTGTTATTGGCCCAGTGGGGGAGGTTTCGGGCGAATGCTGCGGGGATTGGATTGGTCCTATCATGAGGGTGCGAGTTGTTTTGGATGTTACGAGACCATTGCGTCGGGTGGTGCGGTTTCAAGAAGGTGTGGAGACGTTCAGGTGGTGCCCAATTCAGTACGAACGTCTTTCGGATTTTTGCTTTAGGTGTGGCTGCATAGGCCATTCCCATCGCGAGTGTTCCGCTGAAAATTTGCCGAATGTGACTGAGGGCCTTTTCCCTTTTGGGGACTGGCTTTGTGCCCAATCTCTCAGGCGGCCTATTTAG

Coding sequence (CDS)

ATGGATTCTTTGGGACTGGGTTGGTACCCGTTGATGGTTGGCTTCAGATGCATCCAACGAAGATGGAAGGTCTGCTGGTTGGAAGCCTTAGTAATCTGTGAAGGCCTTCGTGTGATATCGAGCGAAGCACCCAAAATTTGCGTGGAGATGGATGCTATCCAAATCGTGCACCTTCTCTCTAATGAGGAACAAGACCTTACAGAGCTCTCAAATTTTATTGTCGATGCCCAAGGACTTTTGGATTCTCACAAAAACGAGTCAGTTGGGTATATCTCAAGAAATCATAACAGGATGGCACACATAATAGCTCAAAAAGCGTGTGAATTGAAGTCATCTGAGATGTGGACTAATCTCTTTTCTGATTGGTTAGTTTCTTTTAATGAGGAGGCAGAAGATGGCGCAGGGTTTGGATCCATGGGGGATGGCAGGGACGTAGCCACCAATAATAATGACGGTTTGAGGAGCGCGGGAACATGTCACTACAAGGGGGTTGAACATGCACGTGACCCTCGTAGTGTTGAAATAGTTGGTATGCCGGGCCGAAGCGCGGAGTTGTCGGCCAGTTATTGTGGTAGACGGTTCCCACCTGAAAGGGAAGTACAATGGGACCATGTTGATCGATGTAGTTCTAGACAGAAACAACCAAGTGTTTCCTCTAGCCTACGCAATCGTGGACAAGGAGACCGATCGGTCATGGACATGGTTCGTGTAGAATCAAAGATTGTGATAAGAGAGGACGCAAGAATGATGTTTGTTTCTGACCGCCACATGTCCATAGCAAATTCGGTGGAGGTACTGGCAACAGATATCGCAATTGAGGGGGGTGTCGTTGCAGATTATCTGAATGAGATCGGAATTGAAAGGTGGTCCCGATGCCATGAAACACATAGGCGGTACGACAGCATGACCAACAATGAGGCTGAGTGCTTCAATGCCTTAACCGTGGAGACCAGACTATTGCCAATCACTGCTCTGTTAGACCACACACGGGGGATCGTACAGACGTGGTTTTACGAGTGGCGCAACTACTGGGCATCTCGAACTTCCACGCACTCAAACTATGCACTGGAGCGGATGACATTCGAGCTGGAAAGGGGGAGACGGTATCCGGTTGAACCGATAGACTGTTATCGACTAAATGGTTCTAGGGCGGCAGCGTTTTTTGGGTTTGCGGCGGTGATGGCTGTGGTCGGCGATGGGGCTTTTGATGATCTTGTTGAACGATGGAGCAGTATGGGTCTCTCGGAGGAGGAGTCGAAGGCGGTGCCGGTGCCGGAGAATGTCCCTCTACTTGACGACGCGACTGTTCAGGTATGCGCAGTGTGGAAAGTTTTGACGAGCCGATTTGTTAACCCTGATGCGTTAAGGAGAGTGATGTTGTCGGCCTGGAATGCCCATCGGTCTACTCGGATCGAGCCTCTAGGCGAAAACCTTTTTGTGATCCAGTTTTTTTCTGTAGGTGAGAAGCGACGTGTATTGACGTCAGGACCGTGGAATTTTGATAAAGCGCTTTTTGTCCTGGTCTCTCCCTCTGGTGCTGATAGTCCGACACTCATTGACTTCACAAAGTGTGCCTTTTGGGTGCATATCAATAAGGTACCGTTGAATTTCCTTACCCCTGCGATGGCTCGTGCTCTTGGCAGTGTTATTGGCCCAGTGGGGGAGGTTTCGGGCGAATGCTGCGGGGATTGGATTGGTCCTATCATGAGGGTGCGAGTTGTTTTGGATGTTACGAGACCATTGCGTCGGGTGGTGCGGTTTCAAGAAGGTGTGGAGACGTTCAGGTGGTGCCCAATTCAGTACGAACGTCTTTCGGATTTTTGCTTTAGGTGTGGCTGCATAGGCCATTCCCATCGCGAGTGTTCCGCTGAAAATTTGCCGAATGTGACTGAGGGCCTTTTCCCTTTTGGGGACTGGCTTTGTGCCCAATCTCTCAGGCGGCCTATTTAG

Protein sequence

MDSLGLGWYPLMVGFRCIQRRWKVCWLEALVICEGLRVISSEAPKICVEMDAIQIVHLLSNEEQDLTELSNFIVDAQGLLDSHKNESVGYISRNHNRMAHIIAQKACELKSSEMWTNLFSDWLVSFNEEAEDGAGFGSMGDGRDVATNNNDGLRSAGTCHYKGVEHARDPRSVEIVGMPGRSAELSASYCGRRFPPEREVQWDHVDRCSSRQKQPSVSSSLRNRGQGDRSVMDMVRVESKIVIREDARMMFVSDRHMSIANSVEVLATDIAIEGGVVADYLNEIGIERWSRCHETHRRYDSMTNNEAECFNALTVETRLLPITALLDHTRGIVQTWFYEWRNYWASRTSTHSNYALERMTFELERGRRYPVEPIDCYRLNGSRAAAFFGFAAVMAVVGDGAFDDLVERWSSMGLSEEESKAVPVPENVPLLDDATVQVCAVWKVLTSRFVNPDALRRVMLSAWNAHRSTRIEPLGENLFVIQFFSVGEKRRVLTSGPWNFDKALFVLVSPSGADSPTLIDFTKCAFWVHINKVPLNFLTPAMARALGSVIGPVGEVSGECCGDWIGPIMRVRVVLDVTRPLRRVVRFQEGVETFRWCPIQYERLSDFCFRCGCIGHSHRECSAENLPNVTEGLFPFGDWLCAQSLRRPI

Homology

[Close]

BLAST of Lcy11g017430 vs. ExPASy TrEMBL
Match: A0A6J1D765 (uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017902 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 3.5e-57
Identity = 101/247 (40.89%), Postives = 153/247 (61.94%), Query Frame = 0


Query: 403 DDLVERWSSMGLSEEESKAVPVPENVPLLDDATVQVCAVWKVLTSRFVNPDALRRVMLSA 462
           D++ + W     + +E++ V +    P+L    V++C V K+ TS+ ++ +A+R VM S 
Sbjct: 2   DEITDLWEHFKSTNDENETVTIDRGKPILTADNVKLCVVAKLHTSKRISAEAIRSVMKSV 61

Query: 463 WNAHRSTRIEPLGENLFVIQFFSVGEKRRVLTSGPWNFDKALFVLVSPSGADSPTLIDFT 522
           W  H STR EPLG N++VI F S+ EK RVL+SGPW F+K+L VL SP+  + P  ++F 
Sbjct: 62  WRVHNSTRFEPLGMNIYVILFKSLSEKSRVLSSGPWTFNKSLLVLTSPTATNQPLDMNFN 121

Query: 523 KCAFWVHINKVPLNFLTPAMARALGSVIGPVGEVSGECCGDWIGPIMRVRVVLDVTRPLR 582
            CAFW+ I+ +P   ++  MA  LG+ +G V E+ G+    W GP +RVRV +DV++PLR
Sbjct: 122 FCAFWIQIHNIPFECISTEMANILGAKLGDVEEIEGDGADGWAGPFIRVRVKIDVSKPLR 181

Query: 583 RVVRFQEGVETFRWCPIQYERLSDFCFRCGCIGHSHRECSAENLPNVTEGLFPFGDWLCA 642
           R ++ +       WCP++YE+L DFC+ CG IGHS REC   +    T     +GDWL A
Sbjct: 182 RGIKLKNSDGKDIWCPLRYEKLPDFCYECGKIGHSGRECEQRSKVVTTNSPEQYGDWLRA 241

Query: 643 QSLRRPI 650
             L++ +
Sbjct: 242 TLLKKSV 248

[Close]

BLAST of Lcy11g017430 vs. ExPASy TrEMBL
Match: A0A6J1DVS4 (uncharacterized protein LOC111023555 OS=Momordica charantia OX=3673 GN=LOC111023555 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 5.5e-47
Identity = 91/218 (41.74%), Postives = 132/218 (60.55%), Query Frame = 0


Query: 403 DDLVERWSSMGLSEEESKAVPVPENVPLLDDATVQVCAVWKVLTSRFVNPDALRRVMLSA 462
           DD+ + W +  L +EE   + +    P+L    +Q+CAV K+  S+ +  +A   VM   
Sbjct: 2   DDITKLWENFTLIKEEEDTIVIDNQKPILTVDNIQLCAVGKLHPSKRITVEAFASVMKQV 61

Query: 463 WNAHRSTRIEPLGENLFVIQFFSVGEKRRVLTSGPWNFDKALFVLVSPSGADSPTLIDFT 522
           W  H STRIE  G N++VI F ++ EK RV + GPW FDK+L +LV  + A+ P  ID +
Sbjct: 62  WKIHNSTRIETAGLNIYVIAFKTMAEKIRVFSLGPWTFDKSLLILVPTTAANKPLDIDIS 121

Query: 523 KCAFWVHINKVPLNFLTPAMARALGSVIGPVGEVSGECCGDWIGPIMRVRVVLDVTRPLR 582
            CAFWV I+ +    +T  MA+ LG+ +G V EV G    DW+ P + VRV ++V +PLR
Sbjct: 122 LCAFWVQIHYITFECMTKDMAKFLGARLGEVEEVDGMSSYDWVRPFLWVRVKINVLKPLR 181

Query: 583 RVVRFQEGVETFRWCPIQYERLSDFCFRCGCIGHSHRE 621
           R ++ +       WCP++YERL DFC+ CGC+GHS RE
Sbjct: 182 RGLKVKTSDGKDIWCPLRYERLPDFCYGCGCVGHSIRE 219

[Close]

BLAST of Lcy11g017430 vs. ExPASy TrEMBL
Match: A0A1S8AC25 (CCHC-type domain-containing protein (Fragment) OS=Citrus limon OX=2708 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 4.5e-41
Identity = 88/245 (35.92%), Postives = 139/245 (56.73%), Query Frame = 0


Query: 403 DDLVERWSSMGLSEEESKAVPVPENVPLLDDATVQVCAVWKVLTSRFVNPDALRRVMLSA 462
           ++L++R  ++ LS+EE   V     + +  +  +  C V KVL +R V+ + L+  M   
Sbjct: 4   EELIKRCRAIRLSDEEGGRVSFKNRMKINGEKILAGCLVGKVLHTREVSIEGLKMAMQRV 63

Query: 463 WNAHRSTRIEPLGENLFVIQFFSVGEKRRVLTSGPWNFDKALFVLVSPSGADSPTLIDFT 522
           W   R  +IE LGEN+F+ +F S  +KR ++  GPW+FD+AL  L  P+G       DF+
Sbjct: 64  WRTSREVKIEKLGENVFMFKFGSEVDKRSIMVGGPWHFDRALIGLTEPTGIGDIKKQDFS 123

Query: 523 KCAFWVHINKVPLNFLTPAMARALGSVIGPVGEVSGECCGDWIGPIMRVRVVLDVTRPLR 582
             +FWV I+ VP+  ++  MA  LG VIG V EV  +  G+  G  +R+R+ +D+T+PL+
Sbjct: 124 HVSFWVQIHDVPIMCMSKDMAAELGKVIGKVEEVETDAAGECFGQFLRLRISVDITKPLK 183

Query: 583 RVVRFQEGVETFRWCP--IQYERLSDFCFRCGCIGHSHRECSAENLPNVTEGLFPFGDWL 642
           +++  ++  E     P  + YERL DFCF CG IGH +REC      +  E    +G WL
Sbjct: 184 KIIELEQEEEDADDIPMRVMYERLPDFCFCCGRIGHQYRECFYYKSQSKDE--LAYGPWL 243

Query: 643 CAQSL 646
            A ++
Sbjct: 244 KANTV 246

[Close]

BLAST of Lcy11g017430 vs. ExPASy TrEMBL
Match: A0A6J1DP89 (uncharacterized protein LOC111022932 OS=Momordica charantia OX=3673 GN=LOC111022932 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 3.3e-39
Identity = 80/200 (40.00%), Postives = 122/200 (61.00%), Query Frame = 0


Query: 403 DDLVERWSSMGLSEEESKAVPVPENVPLLDDATVQVCAVWKVLTSRFVNPDALRRVMLSA 462
           D++ E W +  L++E+ + + +    PL+    VQ  AV K+ TS+ ++ +A R VM S 
Sbjct: 2   DEITELWENFTLTKEKEETIIIDSEKPLMTPENVQRYAVGKLHTSKRISVEAFRSVMKSL 61

Query: 463 WNAHRSTRIEPLGENLFVIQFFSVGEKRRVLTSGPWNFDKALFVLVSPSGADSPTLIDFT 522
           W  H ST IE  G NL+VI F S+ EK RVLTSGPW+F+ +L VL SP+  D P  ++F 
Sbjct: 62  WKVHESTHIETAGMNLYVIVFKSMAEKNRVLTSGPWSFETSLLVLTSPTATDQPRDMNFN 121

Query: 523 KCAFWVHINKVPLNFLTPAMARALGSVIGPVGEVSGECCGDWIGPIMRVRVVLDVTRPLR 582
             A W+ I+ +P   +   MA+ LG+ IG V E+      +W GP +RVRV +D+++P +
Sbjct: 122 FFALWIQIHCIPFQCMIKDMAKFLGTRIGEVEEIDCNGSYEWTGPFIRVRVQIDISKPFK 181

Query: 583 RVVRFQEGVETFRWCPIQYE 603
           R ++ + G E   WCP++YE
Sbjct: 182 RGLKVRTGDEKESWCPLRYE 201

[Close]

BLAST of Lcy11g017430 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.2e-38
Identity = 87/242 (35.95%), Postives = 135/242 (55.79%), Query Frame = 0


Query: 403 DDLVERWSSMGL-SEEESKAVPVPENVPLLDDATVQVCAVWKVLTSRFVNPDALRRVMLS 462
           ++L+  W    L SEE+  A+ V  +   + +  +    V K+L  R ++ D L RV+L 
Sbjct: 4   ENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRVLLL 63

Query: 463 AWNAHRSTRIEPLGENLFVIQFFSVGEKRRVLTSGPWNFDKALFVLVSPSGADSPTLIDF 522
           AW       +E +G+NLF+  F    +  RV+ +GPW FDKAL VL  P  + + + ++F
Sbjct: 64  AWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISELEF 123

Query: 523 TKCAFWVHINKVPLNFLTPAMARALGSVIGPVGEVSGECCGDWIGPIMRVRVVLDVTRPL 582
            + AFW+H+  +P+++L   MA  LG+ IG   +V     G   G  +R+RV++D+T+PL
Sbjct: 124 NRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDITKPL 183

Query: 583 RRVVRFQ-EGVETFRWCPIQYERLSDFCFRCGCIGHSHRECSAENL--PNVTEGLFPFGD 641
           RR ++   +G     W PIQYERL DFC+ CG IGHS  +C A  L   + +     +G 
Sbjct: 184 RRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATSEYGP 243

[Close]

BLAST of Lcy11g017430 vs. NCBI nr
Match: XP_022149484.1 (uncharacterized protein LOC111017902 [Momordica charantia])

HSP 1 Score: 233.0 bits (593), Expect = 7.2e-57
Identity = 101/247 (40.89%), Postives = 153/247 (61.94%), Query Frame = 0


Query: 403 DDLVERWSSMGLSEEESKAVPVPENVPLLDDATVQVCAVWKVLTSRFVNPDALRRVMLSA 462
           D++ + W     + +E++ V +    P+L    V++C V K+ TS+ ++ +A+R VM S 
Sbjct: 2   DEITDLWEHFKSTNDENETVTIDRGKPILTADNVKLCVVAKLHTSKRISAEAIRSVMKSV 61

Query: 463 WNAHRSTRIEPLGENLFVIQFFSVGEKRRVLTSGPWNFDKALFVLVSPSGADSPTLIDFT 522
           W  H STR EPLG N++VI F S+ EK RVL+SGPW F+K+L VL SP+  + P  ++F 
Sbjct: 62  WRVHNSTRFEPLGMNIYVILFKSLSEKSRVLSSGPWTFNKSLLVLTSPTATNQPLDMNFN 121

Query: 523 KCAFWVHINKVPLNFLTPAMARALGSVIGPVGEVSGECCGDWIGPIMRVRVVLDVTRPLR 582
            CAFW+ I+ +P   ++  MA  LG+ +G V E+ G+    W GP +RVRV +DV++PLR
Sbjct: 122 FCAFWIQIHNIPFECISTEMANILGAKLGDVEEIEGDGADGWAGPFIRVRVKIDVSKPLR 181

Query: 583 RVVRFQEGVETFRWCPIQYERLSDFCFRCGCIGHSHRECSAENLPNVTEGLFPFGDWLCA 642
           R ++ +       WCP++YE+L DFC+ CG IGHS REC   +    T     +GDWL A
Sbjct: 182 RGIKLKNSDGKDIWCPLRYEKLPDFCYECGKIGHSGRECEQRSKVVTTNSPEQYGDWLRA 241

Query: 643 QSLRRPI 650
             L++ +
Sbjct: 242 TLLKKSV 248

[Close]

BLAST of Lcy11g017430 vs. NCBI nr
Match: XP_022156711.1 (uncharacterized protein LOC111023555 [Momordica charantia])

HSP 1 Score: 199.1 bits (505), Expect = 1.1e-46
Identity = 91/218 (41.74%), Postives = 132/218 (60.55%), Query Frame = 0


Query: 403 DDLVERWSSMGLSEEESKAVPVPENVPLLDDATVQVCAVWKVLTSRFVNPDALRRVMLSA 462
           DD+ + W +  L +EE   + +    P+L    +Q+CAV K+  S+ +  +A   VM   
Sbjct: 2   DDITKLWENFTLIKEEEDTIVIDNQKPILTVDNIQLCAVGKLHPSKRITVEAFASVMKQV 61

Query: 463 WNAHRSTRIEPLGENLFVIQFFSVGEKRRVLTSGPWNFDKALFVLVSPSGADSPTLIDFT 522
           W  H STRIE  G N++VI F ++ EK RV + GPW FDK+L +LV  + A+ P  ID +
Sbjct: 62  WKIHNSTRIETAGLNIYVIAFKTMAEKIRVFSLGPWTFDKSLLILVPTTAANKPLDIDIS 121

Query: 523 KCAFWVHINKVPLNFLTPAMARALGSVIGPVGEVSGECCGDWIGPIMRVRVVLDVTRPLR 582
            CAFWV I+ +    +T  MA+ LG+ +G V EV G    DW+ P + VRV ++V +PLR
Sbjct: 122 LCAFWVQIHYITFECMTKDMAKFLGARLGEVEEVDGMSSYDWVRPFLWVRVKINVLKPLR 181

Query: 583 RVVRFQEGVETFRWCPIQYERLSDFCFRCGCIGHSHRE 621
           R ++ +       WCP++YERL DFC+ CGC+GHS RE
Sbjct: 182 RGLKVKTSDGKDIWCPLRYERLPDFCYGCGCVGHSIRE 219

[Close]

BLAST of Lcy11g017430 vs. NCBI nr
Match: XP_024953751.1 (uncharacterized protein LOC112498094 [Citrus sinensis])

HSP 1 Score: 184.9 bits (468), Expect = 2.2e-42
Identity = 88/245 (35.92%), Postives = 141/245 (57.55%), Query Frame = 0


Query: 403 DDLVERWSSMGLSEEESKAVPVPENVPLLDDATVQVCAVWKVLTSRFVNPDALRRVMLSA 462
           ++L+ R  ++ LS+EE   V     +    +  V  C + KV+ +R V+ + L+  M   
Sbjct: 4   EELIRRCRAIKLSDEEGGRVSFKSKMKDKGEKIVAGCLIGKVINTRGVSIEGLKMAMQRV 63

Query: 463 WNAHRSTRIEPLGENLFVIQFFSVGEKRRVLTSGPWNFDKALFVLVSPSGADSPTLIDFT 522
           W   R  +IE LG+N+F+ +F S  +KR +L  GPW+FD+AL VL+ P G       DF+
Sbjct: 64  WKTTREVKIESLGDNIFIFKFGSEADKRSILVGGPWHFDRALIVLIEPVGIGDVKKQDFS 123

Query: 523 KCAFWVHINKVPLNFLTPAMARALGSVIGPVGEVSGECCGDWIGPIMRVRVVLDVTRPLR 582
             +FWV I+ VP+  +T  M  ALG  IG V EV  +  G+  G  +R+R+ +D+TRPL+
Sbjct: 124 HTSFWVQIHDVPIMCMTKEMKPALGEAIGKVEEVETDAAGECFGQFLRLRISVDITRPLK 183

Query: 583 RVVRFQEGVETFRWCPIQ--YERLSDFCFRCGCIGHSHRECSAENLPNVTEGLFPFGDWL 642
           +++  ++  +     P+Q  YERL DFCF CG IGH +REC+  +  + ++    +G WL
Sbjct: 184 KILELEQEGQAEEDIPMQVMYERLPDFCFCCGRIGHQYRECA--HYKSQSKDELAYGPWL 243

Query: 643 CAQSL 646
            A ++
Sbjct: 244 KASTI 246

[Close]

BLAST of Lcy11g017430 vs. NCBI nr
Match: XP_024041282.1 (uncharacterized protein LOC112098886 [Citrus clementina])

HSP 1 Score: 181.0 bits (458), Expect = 3.2e-41
Identity = 89/247 (36.03%), Postives = 141/247 (57.09%), Query Frame = 0


Query: 404 DLVERWSSMGLSEEESKAVPVPENVPLLDDATVQVCAVWKVLTSRFVNPDALRRVMLSAW 463
           +L++R  ++ LS+EE   V     +    +  V  C + KVL +R VN + L+  M   W
Sbjct: 5   ELIKRCRAIRLSDEEYGRVTFMSKMKAKREIIVAGCLIGKVLNTRGVNSEGLKMAMQRVW 64

Query: 464 NAHRSTRIEPLGENLFVIQFFSVGEKRRVLTSGPWNFDKALFVLVSPSGADSPTLIDFTK 523
              R  +IE LG+N+F+ +F S  +KR ++  GPW+FD+AL VL  P G  +    DF  
Sbjct: 65  KTSREVKIESLGDNVFMFKFGSEADKRSIIAGGPWHFDRALMVLTEPVGIGAVKKQDFRH 124

Query: 524 CAFWVHINKVPLNFLTPAMARALGSVIGPVGEVSGECCGDWIGPIMRVRVVLDVTRPLRR 583
            +FWV I+ VP+  +T  MA  LG V+G V EV  +  G++IG  +R+R+ +DVT+ L++
Sbjct: 125 LSFWVQIHDVPIMCMTKEMATVLGEVVGKVEEVETDAAGEYIGQFLRMRISVDVTKLLKK 184

Query: 584 VVRFQEGVETFR-WCPIQYERLSDFCFRCGCIGHSHRECSAENLPNVTEGLFPFGDWLCA 643
           ++  QEG +       + YERL DFCF CG I H +REC   +  + ++    +G WL A
Sbjct: 185 IMLEQEGEDDEDILIRVMYERLLDFCFCCGRIRHQYREC--VHYKSQSKDEMAYGPWLKA 244

Query: 644 QSLRRPI 650
            ++ + +
Sbjct: 245 MTITKKL 249

[Close]

BLAST of Lcy11g017430 vs. NCBI nr
Match: XP_006484927.1 (uncharacterized protein LOC102626623 [Citrus sinensis])

HSP 1 Score: 175.6 bits (444), Expect = 1.4e-39
Identity = 88/219 (40.18%), Postives = 127/219 (57.99%), Query Frame = 0


Query: 403 DDLVERWSSMGLSEEESKAVPVPENVPLLDDATVQVCAVWKVLTSRFVNPDALRRVMLSA 462
           ++L+ R  ++ L +EE  AV     +    +     C V K+L +R VN + LR  M  A
Sbjct: 4   EELIRRCKTITLKDEEDDAVMFIGGMKNDGERVAAHCLVGKILLNRDVNKEGLRYAMQLA 63

Query: 463 WNAHRSTRIEPLGENLFVIQFFSVGEKRRVLTSGPWNFDKALFVLVSPSGADSPTLIDFT 522
           W   +  ++E LG+N+FV +F +  +K+RVLT GPW+FDKAL VLV P G  S     FT
Sbjct: 64  WKTTKEIKVESLGDNIFVFKFATEQDKKRVLTEGPWHFDKALIVLVEPVGMGSIKRQPFT 123

Query: 523 KCAFWVHINKVPLNFLTPAMARALGSVIGPVGEVSGECCGDWIGPIMRVRVVLDVTRPLR 582
             +FWV I+ +P+  +       LG  IG V EV  +  G+ IGP  RVR+ +D+T+PL+
Sbjct: 124 HTSFWVQIHGMPIKCMVKGTIEKLGEKIGQVEEVETDEEGECIGPFARVRISVDITKPLK 183

Query: 583 RVVRFQEGVETFRWCPIQYERLSDFCFRCGCIGHSHREC 622
           R++  ++  E      I+Y+RL DFCF CG IGH  REC
Sbjct: 184 RILILKQEGEEDIVMLIKYDRLPDFCFCCGLIGHQFREC 222

[Close]

BLAST of Lcy11g017430 vs. TAIR 10
Match: AT3G42140.1 (zinc ion binding;nucleic acid binding )

HSP 1 Score: 53.1 bits (126), Expect = 9.4e-07
Identity = 36/130 (27.69%), Postives = 58/130 (44.62%), Query Frame = 0


Query: 492 VLTSGPWNFDKALFVLVSPSGADSPTLIDFTKCAFWVHINKVPLNFLTPAMARALGSVIG 551
           +L  GPW+F+  + V+   +   S    +F +  FW+ I  +PL FLT   AR + S+  
Sbjct: 75  ILRRGPWSFNDWMCVIQRWTKLHSDA--EFKRIPFWIQIRGIPLRFLT---ARIITSI-- 134

Query: 552 PVGEVSGECCGDWIGPIMRVRVVLDVTRPLRRVVRFQEGVETFRWCPIQYERLSDFCFRC 611
                     G+ +G  +   +  DV+     V++F            QYE+L +FC  C
Sbjct: 135 ----------GERMGLFLETNLGRDVS-----VLKF------------QYEKLKNFCTTC 170

Query: 612 GCIGHSHREC 622
           G + H   EC
Sbjct: 195 GMLSHDASEC 170

The following BLAST results are available for this feature:

BLAST of Lcy11g017430 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy11g017430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D765	3.5e-57	40.89	uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A6J1DVS4	5.5e-47	41.74	uncharacterized protein LOC111023555 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A1S8AC25	4.5e-41	35.92	CCHC-type domain-containing protein (Fragment) OS=Citrus limon OX=2708 PE=4 SV=1	[more]
A0A6J1DP89	3.3e-39	40.00	uncharacterized protein LOC111022932 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1DU55	1.2e-38	35.95	uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]

BLAST of Lcy11g017430 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149484.1	7.2e-57	40.89	uncharacterized protein LOC111017902 [Momordica charantia]	[more]
XP_022156711.1	1.1e-46	41.74	uncharacterized protein LOC111023555 [Momordica charantia]	[more]
XP_024953751.1	2.2e-42	35.92	uncharacterized protein LOC112498094 [Citrus sinensis]	[more]
XP_024041282.1	3.2e-41	36.03	uncharacterized protein LOC112098886 [Citrus clementina]	[more]
XP_006484927.1	1.4e-39	40.18	uncharacterized protein LOC102626623 [Citrus sinensis]	[more]

BLAST of Lcy11g017430 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G42140.1	9.4e-07	27.69	zinc ion binding;nucleic acid binding	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025558	Domain of unknown function DUF4283	PFAM	PF14111	DUF4283	coord: 435..559 e-value: 1.2E-17 score: 63.8
IPR025836	Zinc knuckle CX2CX4HX4C	PFAM	PF14392	zf-CCHC_4	coord: 575..622 e-value: 5.1E-13 score: 48.5
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 28..106 e-value: 4.2E-9 score: 36.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 205..228
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 211..226
None	No IPR available	PANTHER	PTHR31286:SF84	SUBFAMILY NOT NAMED	coord: 416..635
IPR040256	Uncharacterized protein At4g02000-like	PANTHER	PTHR31286	GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKE	coord: 416..635
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 608..621 score: 9.075821

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g017430.1	Lcy11g017430.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity
molecular_function	GO:0008270	zinc ion binding