Lcy11g017280 (gene) Sponge gourd (P93075) v1

Overview
NameLcy11g017280
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionTransposase
LocationChr11: 42995303 .. 43005653 (-)
RNA-Seq ExpressionLcy11g017280
SyntenyLcy11g017280
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTTCCTCTTTCTTTGATTATTTTTGGTGATGTCCTGGGCTCTTTTGTTGAGGCTACTCAGGCTAGAGTTTAGTTCCTTGCCTTTTCTTGTTCTAGCAATGTTATTGTATTGTCTTGAAGCAACTTATTGTGTTATGAATGTTGGTATTTACTATTTTGTGGAATATATCTTGGTTTAACTTTTAAGGTTGCATTACAAGCATTTTTATGCCCACAATATTTCTTTGAAGCTCATTGTCTTCCTTTTACTAAGATATTCCATACCTTAGTATTTGGAAGGTATCCCAATATTTAGATTTTACACAGGGAACAATGTATCATTTTGGTCACTTTGTTTGATGTATAGTAACACATAACTTCAAATTGGATGACGAGGATCAGGGGTTTCGATTGCAACGTGATTTTGGACAGCAAATTGTTGACAATAGGTACGCTTTGCCTTAAGTTTAAATTGGACGATGTATGTCATGGGTGCTTTTTTACTAGTTTATATTTTGTGGCTAGGTTCAAGAATTTTTTTGAGGTATTTCTTTGGCTTCATAATGAGTATTTTGTTGGTTGAATTTTCATGCATTCTTTTTGGTCATTTCACAAGTAATTTTCTAATTTGGTTTTAAGGTGATAATTTCACCATGAATTCAATTTTAGGATTTAATATTTATGTTTAAGGTCAGAATTCAATCACTGAGTTTGGTCTAAGAGTGAATCTTGATTTTTTTCCATAAAGAGCTAATACTGATCATACCTTAGACATTTATTGTTGTAGAATTGTCTAAACTTAGAGTTCAAATGTATGTGATGGGACATAATGTCATCTTTTTGAATGTTTGTGCTTACTGTATCAATGCACTAGGAAAATCAATTTTACTTGAGCATGGAATGCATATATGAAGTATATATGAAGTTGACTTGCAATGCTTGAATGTTGTACAAAGCATGGAAAAAAAAAAGTAGCTTGCAATGTTTTTGATGCAAATATAAATAATAATGTCAAGGTAATTGTTTAGGATTAATTTGTAATTATCTTGGGTTAAGGGCTATTATTAGGGTCAGTATCTGACAAGGACAATTGATTTTAGCACTATTTTGACATAGCTTTTCTTAAAGAAGCTTATAAGTCGTTACTGTGAATTTCACTTTCTGACTTTTCTCGTTGTTCATTATCATTGTTATTTCTTTGAATGAGATTGTTTATTACCATTGTTCTTATATTCAGTTATAAACAGATTAAGTTTGTTTTAAGAAGTTTGAACCGTATGCTTTTGTTGAGTTAGGTTGAGGCCCTGTTAGGTAGTTGTTGATACGAGACCTGACTCGTATGGTGATATTGTGTTGTGTTGAAGTTAGGTGGAGTAGATGAAGATGTTATAGAAGTATTATTCTTGTGTTGACGTGTGTTTGAATTTCATGCCTCACATTTTTATAAAATTTAAAACCGATCTCTTAAAAAAAAAAATACAGGTCGAGTAAGACAGTCGGTGAGATTTTTTGACATAAGAATTTTTAAAAATAAGCAGGTTGGGGTTTAGGAATAAGATCAAGAGAAGATTTTTAAAAATTGTCTTCGTTGGTGGGTGGGTTTTTAAGAGGAGATGGTGATTAAAAAAAAAAAAATTACACAGATGAATTTAATTGTTGGGCCATTTATTCAATAAATAAAATGCATGATCATATTTCAAAACATGCATTTAAATTTTATCATTAGTTATCACTTTTTTTAAAAGAGTTGAACTGAAAAAACAAAAAAGAAAAAAAAATTCACCCATAAACTTTCAATTTCATCAAATTGGACTCGAGAGATAGTTAAACATTACCATTTTTAACCTCAATTCAAAATTTGCTAATTCACCCACTATTTTTAACAAAAACTAATGTGAAATCTTTATAAACTCACTAATTTCAATAATATCAAAATTTGTACAAATTTAAGTTTGAATGCACAAGTATTAACAACAAATTTAGCTCTAAATGTTGTTTTTCTTTAATCTTATCAATTTTGTATCATATAAAATATATTTTATAATTTATGGGAAGCATTTGAGAATATTATCTTAATGAATTCTCAAACAAAACTTATTTTAGGGTAAAAATTATAACATTTTTTCAAGTTGAAAGTTAAGATTGCAACACTCATCGAAGTTTCAGGTGCAATTTGATGAAATTGGAAGTTTGGGATAAAAATTTAAACAACTTACCAATTTAGAGGTAAAAATTGATTAAAAAAAATGATGAAACTAGGAGATCTACTTTATTTTCTTGTAAAAGGAGGTATATTTGTAAAATTTTGCTAAATGTTCATTTCATTGTCATCTATGCACAGTTTTATCTCTTCTAAATTTGTTAAAAAAAAAAAAAAAAACTCTTCCAAACTCCTTTTCCATCTAATTATTATTAAATTTTTTTAATAATAAATAAAATCTCCATTGATGTGAGTTTGCATTTTTCTTCTTTGCCATTTCCATCGTATTTCTCTAATTGGTTGATTTCTCTTTATGTTTTTCTTTCTCTATTTTATTTAAATCTAAGAGATGTAACACATTTTCAGAAACATTGTTTTCTTTATTTTTCTTCCATTTTCATATTTCCTCGGAAAGTTAATTAAACCTATTTTTCTTATTGTATTTTAATTTTTTATATATGATAAAACTATTTTTCTTATCGTATCGATTTTGAAAGATAAAATTGATGGGAGAATTTGAAGCAAGATAATGAAATGAAATACATTTTAAAAATTATGATAGAAACCTTTTTGTTTCCAAAGAGACTAAAATTTGAAAAAAACTTCTATGACTTGACAAAACCTTTCTTTTATTCTTGATTCTTTCCCCTTCTTTTCCAATAATTTTCTTTTTCATGGTTTTTGTTTTTTAAAACAAATTTAATAAGAGAGATATCTATTAATAATCTGACTAAGCTTGATTGATTTAATTTATGTTCGAAAAATGAGATGGAGAAGAGTCATGATTTTTTCAATAAGCTTATAACTACAATGATTTTAGTTCACATTTTAAAATCACATGTTCCTTGGGTATATTTATAGTTTATAATAATAATAGTAATGCTACCAAAAGTCTGGATTAATTAAGTTGTCTTACATAATATATCTAAGAAATTGTCATAAATGACCCATTTAGAGTTTGTTTTGTTTTTTTTTGTTTTGTTTTTTTTTTTTAAAAAAAAAATCAAATTTGTGTTGTAATTTGAAATTAATTTACAAATATAGTCTTGTAACATAAAAGGGGAAAATCCATCATTTATATGTGTATATTTGCATATATATATATATATATATATATATATATAATTGATTGGGAAACCAAAACCTAAGCCACTCCCTCAACCCTTTTCTTTTCTTTATGTCCAAACATTGGGTCATAGTCTAACTACTGAATATAAATGGTTTCTTCTACCAAAGCTAGGGCCTATTTATAGAAAATTACGTGAGAATTGGTAACTATTTTCTTTCAAAATAAATAATTATAAATATTTAAAACTTGAGAATAAATAGATAAGAAAATAATCCAAATGAAATTCGAATGAAAATTTTTAAATCAAATCCTAACAATCAAATGAAAAGGAGTACAATGATAAATATTTGATTATAACAAATATTTATGAAAATATTTTTCTCACTTTTTTATTTTTTAAATCTTTCGTCGTTATAAATTAGCATAACTTGTAGGATTCACGAGCGAAGCAACAAAATTTGAAAAAAAAAAAGAAAGCCAACTATGACCATTTGAACTCCATATTGAACACCATGAATTAGTAAAACAATTAACGACAAAATTAATGTAAAATACTAAAAGAGAAATCATATTCGAGAAAGAAGATGCAAATGACAAAGTAAAAAAATAGAAACCATTGTAGTGAAGAGATGGAGACTTGAGACTGAAATTTTAGATCAAAAGAGATTGGGAGAAGATGGGGGACGAATTAGCAAAATTTTCAAATGTGCCTTTTCTTTTTATGAGATAATAAAGTGGAACCAATCATTTCTCAAGTAAAGTGCAAATATTTGACTCCTTTCATTTCATTTAAATATTGTATTTAAATGATGTACCTAAAAAAAAAAAATATTGTTTTTAAATACTTTTCAAAAAAATATATTGAATTTAAATATCTTCAAAACCTGTGCTAAAAAAACAACAATAATAACAATAATAATTCAAAAGAAATCAAAATTAGTCTTTCATTTCCCTCTCTGGATGGATTATATATCTATAAAATAGTTTCTAATATTATCGCACCACATGATTTATTTTCTTTTAGAACATTTTACGAAATGAGCTCATATATATTTTATCTCTTATCTTACGATTATCCATTTTTCAAATTATACGTTTATTTTTATGAATTAAAAGTTAAATAGGTAGATGCTAATTTCATTTTAGTTTATTTATAGTAATTAACTATATTTTTATGAGTTAAAACTAAGTGTTAGTTTATTAAATAATATAAGTAGATTAAAAATACTCAACTTTTCAAAATTGCAGAAATTATTCTGCTATGTTGGGTTTTTACTTTTTAAAGTGGGTATAATATGGTTTGTAGCGATGGGTAAAAAATATCTTCTCGTCTCTCCCTTTATTAGTTCTCTATTTATTTCTCTTCTCTCACTACAACAAATTCGACTTTTAATGTTGGACAATGCTCGACATTAAAAACACCGACATTGAAAGCTCTGTCCGACATTAAAAGTACCCTTTTAATGTCGGTTATTGCCTGACATTAAAAGACTGTTTTAATGTCGGTCATAGGCTGGTTGACCGACATAAAAAGGGCGCTTTTAATGTCCATCATCATTTTTATTTAGTATTAAATAAGAAAAAATTGTTGGTTGCACACGTAGCTAACCAATAATATTATTTTTTCTTTATGTAAAAACCTGTAAACAAACTAGAGTTTAACTTTATAACTTCCAATACAAATAGCCCAATCCAAACACAATTTTTTTATATCACAAAACCAACTTGAAATACAAACACTTTCATATATCATTTACAATATAATATTTGGACCACCCATCCCTCCACAAATCAGATCTAACCAAATATTCCAGAATCATGCATTTTCAAAAGAGAGAACACATATGAACATTCACTATTGAAGAGTATATGTACACCTAAATAAATCCTAAACAATTCCTCCACTATATATACACACATTTAGAGTTAATTAATGTATTCAAGTACATCTGGCCTACACAAATCTTCCAACAAAATTTGCCCATTCTATACGAACATCGTCGTTCTCATCTTGTGTAAATGTATTCTTTGTGTTAAACTACAACAAAACAAAAACAATTATATGACAAAAGAATGAAAAGAAACATAAATTATAATCACACACGTAAGGATAGTGATAATACTTACAAGGTTTAGTTATAAGGGTATTAGAGTTGTGCATTATTTCTCTTATATATTTTTGCACAAAATACCCACACTCTACCGAACTTGATTGACGGGGGCACTACAATGAAAAAGAACATACTTGAGTATGCATACAAGATTTCAATGTCTATAATATCATGAATGTGAATTTACCTTCACTAGTTTCCAACTAATATCAGATCGATATTGAGGTAGTGAGTGCTTAACTCGTTACATTCTCAACCCCCTAAATAATTTAAAACATTAGAACAATTCAAGTTTTATTTTTCCTTTTAAATAATACAAAAATTTGAGACACACTTACGTACTTATGGTTCCACTAAACTCTTCTTCAACTTTACTATGCAAAGAATTCAATATATACATAGTGTTTTCCCGAGGCTGGATCGCGATTAACATCAATGATGACTATATATAATCACAATTTTGATCATATTATTTTTTTTTAATAAGAAAAGTTACAATAAAGTAAATATCGCTAGTAAGAATTACTTGCCCAGCGATAAATGAAATGAGAACTAGTTGATCCAAATCAACCATATCTAGTCTGTTAGATAGATTTCTAAAATGAAGTTCTTGAGAGTTCACCTACGATGAGATTGTTGCTTGATTAACCATAAAAAACTTGTTTGTTATCTCGGGATCAAGTACAGTCCAGAGGTACCTAAAAAAAATAATACAAGTATTTATCAACTCAAACACTATAATTTTCACAAACACTTCCAAAGCATAATACAAGTATTATCACCCCCCAAACTCAACTAAACTTGTAAACCAACACCTCCAATACTAAAACTTAACTCAAACACTTTTAAAACATAATACAAGTATTTATCACCCCTCAAACTCAACTAAACTTGTAAACCAACATCTCCAATACTAAAACTTAAGTCAAGCATTTTTCAAAGCATAATACAAGTATTATCACCCCCCAAACTCAACTAAAATTGTAAACCAACACCTCCAATACTAAAACTTAAGTTAAATACTTTCAAAACATAATACAAGTATTTATCAACTCATAAACACTTCCAAAGCATAATACAAGTATTTATCACCCCCCTCAAACTAACACAAACAACTTCAAGTCTTAAATATTAAGAAAATCTCATTCTACTAAGAAAATAGAAAACTCATGAATTAAAATATGTAATAACTTTGTTTACTTACGTAATGTACGTGAGTATGCATGAGTAACCTATCTCAACATTCCTACAATATTGCATGATGTCGTCGCGATGTAAATATGTTGATGCTTCCTTTCCCAAGATACGCTCGTGCATATTGATCTTTAGCATATCTTCTTGTTGCATCGAAAGCATCGCGTATCTATTCAGGAGCCTAATAGTAACATAGACATCCGTATGTTTGCTTGATTGTACTATGGGCTCAGCTTTGGCAGGAGACTCCTATAAAAAATATCTGGTCACTATATTTTTTTTAAAAAAATTATTCAATTGAAATTAAACATACCTCTTTGTCATCTACGGTAATAACAAGTCTGCGAGCCCATCCCACAAAATTACCGACTGCTTGATGCAACGTTTGTAGTTCATCGTTCATAGGAATCGGTAATGCACAATCATCACCTATGACCATGTCCACCACAACTCGAACATTTCCATCTCCTAATGGAACTCCATGAATGGTTGCATTTTGTGGAGCGACTCGTACATTGTGCCTACGGTAACAATGTTATCCATAGAGACTATCGCTAGGTGGCAAGGTGTTCCACCCTATAAAAGTTTAAAACATCAAAGCTAAGTATGTATATATATATATATATATATATATATATATATATATATATATACAAAATTCCAACAAGGATAATAATAATTTACCTCCAAATTCTCAGGTATCTCACGTACAACATCTTTTCCCTTTGACTTTTTATGTGTGACACTATTTTCTTCGTTTGAAGATTGCTTTCGTCGAGGGGCTTCGGTTTTGACAATCGAAGCTTTGCTTTGTGGTTTCTGACTCAACTTTGACTTCTCTTTTGCAACATTGTAGTACATAGAGGGCGTTACGAACTCACCCACTCCCCTTATACGCCCTCTGTGTTTTGGCATGCCCAACGCTTCAGTCAAGATGTCTTTACCTTTATTCAATGCAGCTAATTTGTCCAATCAAATAAACATTTCAATAAAAAATTTTCAATTACTAAGTATCACATAATCCAAAACTTATTTAAAAAATATATATAAAAATTTACAATTCGATTGACACGTGTTAGAGTGATCTCATCACAATATTCTTTATTTTTTTCCCTTTCGTGCTTCCTTCCATAGAATTGCACGATTGGAAGGATCGTCGGACAATTCCTGTAGAAACATACATATTATTAAAAGTATGAATATTTAATTCACAAAATAATTTCACTAATCTGAAGTTTAGTTACCTCCCACTCTACAGTTAGTCTACTACTAACAAATGTTTCCCAGTCCTTTTGATCAATGTGTGAATATTTGGAAGGAGGAGTTGTCTAGCGCTCTGCTTCATCTTTCAATGGAAGCACATACTTCTACGTTAGGTACGTCTTGAACGTTTGAAATTTTCTAGAGGTAGATTGAAGAATACTACTCTTGGACCTAGGGTCCACCACGAACGACATCTGCATAAGAAAAAAACCAAAGTAGTTAGTAAAACAAGTAAACTAAATAAGCTCTTCACTCCTATAGATTAATAAACTTTTTACCCCTATGCAATAAAAAATCTTATCCTTCAGTTCGTTTGGCACATCTTTCCAATTTTCGTATGTTATTGGGATTTGTTGTCTCACACAAACCCCAATGTAAATCTGCATCTGGTTTGCATTCTCTCCAACAGCTTGACCTTAGTTGTTGTATACAATCGTCAAGCGTTCTCCCGTATTTCTGAGGCGTGCCAATCGATGCAACCTAGTGAGCCCTCGTCCTGGCACCCGTGGTTGAATAAGAACAATTCCTTCATCTCCACTACTACTGTTTTGTTCACTCATTGTAACAATCTGCAAGAAAGACGCAAAACATACATTCATGAGATATATAAACTTAGAAGATCTATTAACTCATAAAAAGTATATGAAATAAATGAATTTGAGACAGTACCATATTCAACATACTACTTATCAACCCATATACCCTCACAATCATTTCTAGCATATGTTGATGACATTTCATCGTCATCCTGAAATACATCAAGATTAGGTATTATTTCTAGGATCCTATAACCACAATCTTGGACAATATCTCTAACTTTATATTCATAGAAATCTTCTTCAACTATTCTTTGAGGAGGTGTTAAAACCACTGACAAACGAGGATTTAGGGGATCTTTTACGTAGAATACTTGCTTGACTTGAGAGGCCAAAATGAATGAGTCTGGGAACAAGAACAGGCTTATAATAAACGAGCTTGGGTTTACCACTGTAGATCTTAATCGCATTGGGCATAAATCAGACACATTCATCTTGGCCTCTCAAGTCAAGCAAGTATTTTACGTAAAAGATCCCCTAAATACTCGTTGGTCAGTGGTTTTAAAACCTCCTCAAAGAATAGTTGAAGAAAATTTCTATGAAGATGAAGTTGGAGATATTGTCCAAGATTGTGGTTATGGGGTCCTAGAAAGAATGCCTAATCTTGATGTATTTCAGGATGACGATGAAATGTCATCAACATATGCTAGAAATGATTGTGAGGGTATATGAGTTGATAAGTAGTGTGTTGAATATGGTACTGTCTCAAATTCATTTATTTATTATATTTTTTTATGAGTTAATAGATCTTCTAAGTTTATATATCTCATGAATATATGTTTTGCGTCTTTCTTGCAGATTGTTACAATGAGTGAACAAAACAGTAGCAGTGGAGATGAAGGAATTGTTCTTATTCAACCACGGGTGCCAGGAGGAGGGCTCACTAGGTTGCATCGATTGGCACGCCTCAGAAATACGGGAGAACGCTTGACGATTGTATACAACAACTAAGGTCAAGCTGTTGGAGAGAATGCAAACCAGATGCAGATTTACATTGGGGTTTGTGTGAGACAACAAATCCCAATAACATACGAAAATTGGAAAGATGTGCCAAACGAACTGAAGGATAAGATTTTTTATTGCATAGGGGTAAAAAGTTTATTAATCTATAGGAGTGAAGAGCTTGTTTTGCTTATTACTTTGGTTTTTTTTCTTATGCAGATGTCGTTCGTGGTGGACCTTAGGTCCAAGAGTAGTATTCTTCAATCTGTCTCTAGAAAATTTTGAACGTTCAAGACGTACCTAACGTAGAAGTATGTGCTTCCATTGAAAGATGAACCAGAGCACTTGGCAACTCCTCTTTCCAAATATTCACACATTGATCAAAAGGACTGGGAGACATTTGTTAGTAGTAGACTAACTGCAGAGTGGGAGGTAACTAAACTTCAAATTAGTGAAATTATTTTGTAAATTAAGTATTCATACTTTTAATAATATGTATGTTTCTATAGGAATTGTTCGACGATCCTTCCAATCTTGCAATTTTATGGAAGGAAGCACGAAAGGGAAAAAAATAAAAAATATTGCGATGAGGTCACTCTAGCACGTGTCAATCGAATTGTAAGTTTATATATATTTTTGAAATAAGTTTTGGATTATGTGATACTTTAGTAGTTGAAAAATTCTTATTGAAATGTTTATGATAGGCTGAATTGAATAAAGGTAAAGACATCTTGACTGAAGCGTTGGGCACACCAGAACACAGAGGGCGTGTAAGGGGAGTGGGCGAGTTCGTAACGCCTTCTGTGTACAAAAGGAAAAGAGTTGTACGTGACAAACCTGAGAATTTGGAGGTAAATTATTATTTTGTTGGAATTTTGTATATATATATATACTTAGGTTTGATGTGTTAAACTTTTGAAGGGTGGAACACCCTTGCCACCTAGCAATAGGTTGCTAAGCTCTATGGATAACATTGTTACCGTAGGCACAATGTATG

mRNA sequence

TCTTCCTCTTTCTTTGATTATTTTTGGTGATGTCCTGGGCTCTTTTGTTGAGGCTACTCAGGCTAGAGTTTAGTTCCTTGCCTTTTCTTGTTCTAGCAATGTTATTGTATTGTCTTGAAGCAACTTATTGTGTTATGAATGTTGGTATTTACTATTTTGTGGAATATATCTTGGTTTAACTTTTAAGGTTGCATTACAAGCATTTTTATGCCCACAATATTTCTTTGAAGCTCATTGTCTTCCTTTTACTAAGATATTCCATACCTTAGTATTTGGAAGGTATCCCAATATTTAGATTTTACACAGGGAACAATGTATCATTTTGGTCACTTTGTTTGATGTATAGTAACACATAACTTCAAATTGGATGACGAGGATCAGGGGTTTCGATTGCAACGTGATTTTGGACAGCAAATTGTTGACAATAGATTGCTTTCGTCGAGGGGCTTCGGTTTTGACAATCGAAGCTTTGCTTTGTGGTTTCTGACTCAACTTTGACTTCTCTTTTGCAACATTGTAGTACATAGAGGGCGTTACGAACTCACCCACTCCCCTTATACGCCCTCTGTGTTTTGGCATGCCCAACGCTTCAGTCAAGATGTCTTTACCTTTATTCAATGCAGCTAATTTGTCCAATCAAATAAACATTTCAATAAAAAATTTTCAATTACTAAGTATCACATAATCCAAAACTTATTTAAAAAATATATATAAAAATTTACAATTCGATTGACACGTGTTAGAGTGATCTCATCACAATATTCTTTATTTTTTTCCCTTTCGTGCTTCCTTCCATAGAATTGCACGATTGGAAGGATCGTCGGACAATTCCTGTAGAAACATACATATTATTAAAAGTATGAATATTTAATTCACAAAATAATTTCACTAATCTGAAGTTTAGTTACCTCCCACTCTACAGTTAGTCTACTACTAACAAATGTTTCCCAGTCCTTTTGATCAATGTGTGAATATTTGGAAGGAGGAGTTGTCTAGCGCTCTGCTTCATCTTTCAATGGAAGCACATACTTCTACGTTAGGTACGTCTTGAACGTTTGAAATTTTCTAGAGGTAGATTGAAGAATACTACTCTTGGACCTAGGGTCCACCACGAACGACATCTGCATAAGAAAAAAACCAAAGTAGTTAGTAAAACAAGTAAACTAAATAAGCTCTTCACTCCTATAGATTAATAAACTTTTTACCCCTATGCAATAAAAAATCTTATCCTTCAGTTCGTTTGGCACATCTTTCCAATTTTCGTATGTTATTGGGATTTGTTGTCTCACACAAACCCCAATGTAAATCTGCATCTGGTTTGCATTCTCTCCAACAGCTTGACCTTAGTTGTTGTATACAATCGTCAAGCGTTCTCCCGTATTTCTGAGGCGTGCCAATCGATGCAACCTAGTGAGCCCTCGTCCTGGCACCCGTGGTTGAATAAGAACAATTCCTTCATCTCCACTACTACTGTTTTGTTCACTCATTGTAACAATCTGCAAGAAAGACGCAAAACATACATTCATGAGATATATAAACTTAGAAGATCTATTAACTCATAAAAAGTATATGAAATAAATGAATTTGAGACAGTACCATATTCAACATACTACTTATCAACCCATATACCCTCACAATCATTTCTAGCATATGTTGATGACATTTCATCGTCATCCTGAAATACATCAAGATTAGGTATTATTTCTAGGATCCTATAACCACAATCTTGGACAATATCTCTAACTTTATATTCATAGAAATCTTCTTCAACTATTCTTTGAGGAGGTGTTAAAACCACTGACAAACGAGGATTTAGGGGATCTTTTACGTAGAATACTTGCTTGACTTGAGAGGCCAAAATGAATGAGTCTGGGAACAAGAACAGGCTTATAATAAACGAGCTTGGGTTTACCACTGTAGATCTTAATCGCATTGGGCATAAATCAGACACATTCATCTTGGCCTCTCAAGTCAAGCAAGTATTTTACGTAAAAGATCCCCTAAATACTCGTTGGTCAGTGGTTTTAAAACCTCCTCAAAGAATAGTTGAAGAAAATTTCTATGAAGATGAAGTTGGAGATATTGTCCAAGATTGTGGTTATGGGGTCCTAGAAAGAATGCCTAATCTTGATGTATTTCAGGATGACGATGAAATGTCATCAACATATGCTAGAAATGATTGTGAGGGTATATGAGTTGATAAGTAGTGTGTTGAATATGGTACTGTCTCAAATTCATTTATTTATTATATTTTTTTATGAGTTAATAGATCTTCTAAGTTTATATATCTCATGAATATATGTTTTGCGTCTTTCTTGCAGATTGTTACAATGAGTGAACAAAACAGTAGCAGTGGAGATGAAGGAATTGTTCTTATTCAACCACGGGTGCCAGGAGGAGGGCTCACTAGGTTGCATCGATTGGCACGCCTCAGAAATACGGGAGAACGCTTGACGATTGTATACAACAACTAAGGTCAAGCTGTTGGAGAGAATGCAAACCAGATGCAGATTTACATTGGGGTTTGTGTGAGACAACAAATCCCAATAACATACGAAAATTGGAAAGATGTGCCAAACGAACTGAAGGATAAGATTTTTTATTGCATAGGGGTAAAAAGTTTATTAATCTATAGGAGTGAAGAGCTTGTTTTGCTTATTACTTTGGTTTTTTTTCTTATGCAGATGTCGTTCGTGGTGGACCTTAGGTCCAAGAGTAGTATTCTTCAATCTGTCTCTAGAAAATTTTGAACGTTCAAGACGTACCTAACGTAGAAGTATGTGCTTCCATTGAAAGATGAACCAGAGCACTTGGCAACTCCTCTTTCCAAATATTCACACATTGATCAAAAGGACTGGGAGACATTTGTTAGTAGTAGACTAACTGCAGAGTGGGAGGAATTGTTCGACGATCCTTCCAATCTTGCAATTTTATGGAAGGAAGCACGAAAGGGAAAAAAATAAAAAATATTGCGATGAGGTCACTCTAGCACGTGTCAATCGAATTGCTGAATTGAATAAAGGTAAAGACATCTTGACTGAAGCGTTGGGCACACCAGAACACAGAGGGCGTGTAAGGGGAGTGGGCGAGTTCGTAACGCCTTCTGTGTACAAAAGGAAAAGAGTTGTACGTGACAAACCTGAGAATTTGGAGGCACAATGTATG

Coding sequence (CDS)

ATGAATGAGTCTGGGAACAAGAACAGGCTTATAATAAACGAGCTTGGGTTTACCACTGTAGATCTTAATCGCATTGGGCATAAATCAGACACATTCATCTTGGCCTCTCAAGTCAAGCAAGTATTTTACGTAAAAGATCCCCTAAATACTCGTTGGTCAGTGGTTTTAAAACCTCCTCAAAGAATAGTTGAAGAAAATTTCTATGAAGATGAAGTTGGAGATATTGTCCAAGATTGTGGTTATGGGGTCCTAGAAAGAATGCCTAATCTTGATGTATTTCAGGATGACGATGAAATGTCATCAACATATGCTAGAAATGATTGTGAGGGTATATGA

Protein sequence

MNESGNKNRLIINELGFTTVDLNRIGHKSDTFILASQVKQVFYVKDPLNTRWSVVLKPPQRIVEENFYEDEVGDIVQDCGYGVLERMPNLDVFQDDDEMSSTYARNDCEGI
Homology
[Close]
BLAST of Lcy11g017280 vs. ExPASy TrEMBL
Match: A0A6J1DR79 (uncharacterized protein LOC111023590 OS=Momordica charantia OX=3673 GN=LOC111023590 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 8.9e-38
Identity = 76/104 (73.08%), Postives = 88/104 (84.62%), Query Frame = 0 

Query: 6   NKNRLIINELGFTTVDLNRIGHKSDTFILASQVKQVFYVKDPLNTRWSVVLKPPQRIVEE 65
           NKN L I+ELGFTTVDLN IGHK D+FILASQ KQVF+V+DP+N RWSVVL  PQRIVE+
Sbjct: 733 NKNGLKIDELGFTTVDLNHIGHKLDSFILASQAKQVFFVRDPINPRWSVVLTSPQRIVED 792

Query: 66  NFYEDEVGDIVQDCGYGVLERMPNLDVFQDDDEMSSTYARNDCE 110
           +FYEDE+GD V+DCGYGVL  MPN++ F + DE SSTY RNDCE
Sbjct: 793 DFYEDELGDNVEDCGYGVLPSMPNIETFHESDETSSTYVRNDCE 836

[Close]
BLAST of Lcy11g017280 vs. ExPASy TrEMBL
Match: A0A5A7V303 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G00190 PE=3 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 4.3e-32
Identity = 64/105 (60.95%), Postives = 85/105 (80.95%), Query Frame = 0 

Query: 6   NKNRLIINELGFTTVDLNRIGHKSDTFILASQVKQVFYVKDPLNTRWSVVLKPPQRIVEE 65
           N++ + ++ELGFT VDL RIGHKSD+FILA+Q KQVFYV+D  N  WSVVL  PQR +EE
Sbjct: 728 NRSGVKVDELGFTIVDLKRIGHKSDSFILATQAKQVFYVQDSANPEWSVVLTSPQRTIEE 787

Query: 66  NFYEDEVGDIVQDCGYGVLERMPNLDVFQDDDEMSSTYARNDCEG 111
           NF+EDE+GD++Q+CGY  ++RMPN+D   + D+ +STY R+DCEG
Sbjct: 788 NFFEDEIGDMLQECGYETIKRMPNVDTPNETDDTNSTYIRHDCEG 832

[Close]
BLAST of Lcy11g017280 vs. ExPASy TrEMBL
Match: A0A5D3C2U9 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold398G00070 PE=3 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.6e-31
Identity = 63/105 (60.00%), Postives = 85/105 (80.95%), Query Frame = 0 

Query: 6   NKNRLIINELGFTTVDLNRIGHKSDTFILASQVKQVFYVKDPLNTRWSVVLKPPQRIVEE 65
           N++ + ++ELGFT VDL RIGHKSD+FILA+Q KQVFYV+D  N  WSVVL  PQR +EE
Sbjct: 775 NRSGVKVDELGFTIVDLKRIGHKSDSFILATQAKQVFYVQDSANPEWSVVLTSPQRTIEE 834

Query: 66  NFYEDEVGDIVQDCGYGVLERMPNLDVFQDDDEMSSTYARNDCEG 111
           +F+EDE+GD++Q+CGY  ++RMPN+D   + D+ +STY R+DCEG
Sbjct: 835 DFFEDEIGDMLQECGYETIKRMPNVDTPNETDDTNSTYIRHDCEG 879

[Close]
BLAST of Lcy11g017280 vs. ExPASy TrEMBL
Match: A0A5A7TY60 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold230G00820 PE=3 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.6e-31
Identity = 63/105 (60.00%), Postives = 85/105 (80.95%), Query Frame = 0 

Query: 6   NKNRLIINELGFTTVDLNRIGHKSDTFILASQVKQVFYVKDPLNTRWSVVLKPPQRIVEE 65
           N++ + ++ELGFT VDL RIGHKSD+FILA+Q KQVFYV+D  N  WSVVL  PQR +EE
Sbjct: 438 NRSGVKVDELGFTIVDLKRIGHKSDSFILATQAKQVFYVQDSANPEWSVVLTSPQRTIEE 497

Query: 66  NFYEDEVGDIVQDCGYGVLERMPNLDVFQDDDEMSSTYARNDCEG 111
           +F+EDE+GD++Q+CGY  ++RMPN+D   + D+ +STY R+DCEG
Sbjct: 498 DFFEDEIGDMLQECGYETIKRMPNVDTPNETDDTNSTYIRHDCEG 542

[Close]
BLAST of Lcy11g017280 vs. ExPASy TrEMBL
Match: A0A5A7TC02 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold121G00030 PE=3 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.6e-31
Identity = 63/105 (60.00%), Postives = 85/105 (80.95%), Query Frame = 0 

Query: 6   NKNRLIINELGFTTVDLNRIGHKSDTFILASQVKQVFYVKDPLNTRWSVVLKPPQRIVEE 65
           N++ + ++ELGFT VDL RIGHKSD+FILA+Q KQVFYV+D  N  WSVVL  PQR +EE
Sbjct: 179 NRSGVKVDELGFTIVDLKRIGHKSDSFILATQAKQVFYVQDSANPEWSVVLTSPQRTIEE 238

Query: 66  NFYEDEVGDIVQDCGYGVLERMPNLDVFQDDDEMSSTYARNDCEG 111
           +F+EDE+GD++Q+CGY  ++RMPN+D   + D+ +STY R+DCEG
Sbjct: 239 DFFEDEIGDMLQECGYETIKRMPNVDTPNETDDTNSTYIRHDCEG 283

[Close]
BLAST of Lcy11g017280 vs. NCBI nr
Match: XP_022156750.1 (uncharacterized protein LOC111023590 [Momordica charantia])

HSP 1 Score: 166.0 bits (419), Expect = 1.8e-37
Identity = 76/104 (73.08%), Postives = 88/104 (84.62%), Query Frame = 0 

Query: 6   NKNRLIINELGFTTVDLNRIGHKSDTFILASQVKQVFYVKDPLNTRWSVVLKPPQRIVEE 65
           NKN L I+ELGFTTVDLN IGHK D+FILASQ KQVF+V+DP+N RWSVVL  PQRIVE+
Sbjct: 733 NKNGLKIDELGFTTVDLNHIGHKLDSFILASQAKQVFFVRDPINPRWSVVLTSPQRIVED 792

Query: 66  NFYEDEVGDIVQDCGYGVLERMPNLDVFQDDDEMSSTYARNDCE 110
           +FYEDE+GD V+DCGYGVL  MPN++ F + DE SSTY RNDCE
Sbjct: 793 DFYEDELGDNVEDCGYGVLPSMPNIETFHESDETSSTYVRNDCE 836

[Close]
BLAST of Lcy11g017280 vs. NCBI nr
Match: KAA0060255.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 147.1 bits (370), Expect = 8.8e-32
Identity = 64/105 (60.95%), Postives = 85/105 (80.95%), Query Frame = 0 

Query: 6   NKNRLIINELGFTTVDLNRIGHKSDTFILASQVKQVFYVKDPLNTRWSVVLKPPQRIVEE 65
           N++ + ++ELGFT VDL RIGHKSD+FILA+Q KQVFYV+D  N  WSVVL  PQR +EE
Sbjct: 728 NRSGVKVDELGFTIVDLKRIGHKSDSFILATQAKQVFYVQDSANPEWSVVLTSPQRTIEE 787

Query: 66  NFYEDEVGDIVQDCGYGVLERMPNLDVFQDDDEMSSTYARNDCEG 111
           NF+EDE+GD++Q+CGY  ++RMPN+D   + D+ +STY R+DCEG
Sbjct: 788 NFFEDEIGDMLQECGYETIKRMPNVDTPNETDDTNSTYIRHDCEG 832

[Close]
BLAST of Lcy11g017280 vs. NCBI nr
Match: TYK11813.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 145.2 bits (365), Expect = 3.4e-31
Identity = 63/105 (60.00%), Postives = 85/105 (80.95%), Query Frame = 0 

Query: 6   NKNRLIINELGFTTVDLNRIGHKSDTFILASQVKQVFYVKDPLNTRWSVVLKPPQRIVEE 65
           N++ + ++ELGFT VDL RIGHKSD+FILA+Q KQVFYV+D  N  WSVVL  PQR +EE
Sbjct: 775 NRSGVKVDELGFTIVDLKRIGHKSDSFILATQAKQVFYVQDSANPEWSVVLTSPQRTIEE 834

Query: 66  NFYEDEVGDIVQDCGYGVLERMPNLDVFQDDDEMSSTYARNDCEG 111
           +F+EDE+GD++Q+CGY  ++RMPN+D   + D+ +STY R+DCEG
Sbjct: 835 DFFEDEIGDMLQECGYETIKRMPNVDTPNETDDTNSTYIRHDCEG 879

[Close]
BLAST of Lcy11g017280 vs. NCBI nr
Match: TYK27996.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 145.2 bits (365), Expect = 3.4e-31
Identity = 63/105 (60.00%), Postives = 85/105 (80.95%), Query Frame = 0 

Query: 6   NKNRLIINELGFTTVDLNRIGHKSDTFILASQVKQVFYVKDPLNTRWSVVLKPPQRIVEE 65
           N++ + ++ELGFT VDL RIGHKSD+FILA+Q KQVFYV+D  N  WSVVL  PQR +EE
Sbjct: 179 NRSGVKVDELGFTIVDLKRIGHKSDSFILATQAKQVFYVQDSANPEWSVVLTSPQRTIEE 238

Query: 66  NFYEDEVGDIVQDCGYGVLERMPNLDVFQDDDEMSSTYARNDCEG 111
           +F+EDE+GD++Q+CGY  ++RMPN+D   + D+ +STY R+DCEG
Sbjct: 239 DFFEDEIGDMLQECGYETIKRMPNVDTPNETDDTNSTYIRHDCEG 283

[Close]
BLAST of Lcy11g017280 vs. NCBI nr
Match: TYK21543.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 145.2 bits (365), Expect = 3.4e-31
Identity = 63/105 (60.00%), Postives = 85/105 (80.95%), Query Frame = 0 

Query: 6   NKNRLIINELGFTTVDLNRIGHKSDTFILASQVKQVFYVKDPLNTRWSVVLKPPQRIVEE 65
           N++ + ++ELGFT VDL RIGHKSD+FILA+Q KQVFYV+D  N  WSVVL  PQR +EE
Sbjct: 775 NRSGVKVDELGFTIVDLKRIGHKSDSFILATQAKQVFYVQDSANPEWSVVLTSPQRTIEE 834

Query: 66  NFYEDEVGDIVQDCGYGVLERMPNLDVFQDDDEMSSTYARNDCEG 111
           +F+EDE+GD++Q+CGY  ++RMPN+D   + D+ +STY R+DCEG
Sbjct: 835 DFFEDEIGDMLQECGYETIKRMPNVDTPNETDDTNSTYIRHDCEG 879

The following BLAST results are available for this feature:
BLAST of Lcy11g017280 vs.
Match NameE-valueIdentityDescription
BLAST of Lcy11g017280 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DR798.9e-3873.08uncharacterized protein LOC111023590 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A5A7V3034.3e-3260.95Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G00190 PE=... [more]
A0A5D3C2U91.6e-3160.00Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold398G00070 PE... [more]
A0A5A7TY601.6e-3160.00Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold230G00820 PE... [more]
A0A5A7TC021.6e-3160.00Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold121G00030 PE... [more]
BLAST of Lcy11g017280 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022156750.11.8e-3773.08uncharacterized protein LOC111023590 [Momordica charantia][more]
KAA0060255.18.8e-3260.95transposase [Cucumis melo var. makuwa][more]
TYK11813.13.4e-3160.00transposase [Cucumis melo var. makuwa][more]
TYK27996.13.4e-3160.00transposase [Cucumis melo var. makuwa][more]
TYK21543.13.4e-3160.00transposase [Cucumis melo var. makuwa][more]
BLAST of Lcy11g017280 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025312Domain of unknown function DUF4216PFAMPF13952DUF4216coord: 6..55
e-value: 2.1E-13
score: 50.4
NoneNo IPR availablePANTHERPTHR10775UNCHARACTERIZEDcoord: 10..62
NoneNo IPR availablePANTHERPTHR10775:SF152SUBFAMILY NOT NAMEDcoord: 10..62

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy11g017280.1Lcy11g017280.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0008234 cysteine-type peptidase activity