Lcy11g016690 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g016690
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Zinc finger protein
Location	Chr11: 40278122 .. 40278841 (+)
RNA-Seq Expression	Lcy11g016690
Synteny	Lcy11g016690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGAAGATAGTAGAAGTTCAAATGGAGAAGAAGGCGAACAAGTGATTGGCAGCCTCAAATGCGAGTTTTGTAACAAAGAGTTTACTTCATGGAAGGCTTTGTATGGTCATATGAGGTCTCATCCGGAGAGGCCATGGAGGGGAATGAAACCCCCAACTTCCTCTTCCTCTTCCTCTGCCGCCGCTTTCCGTGGCGGCTCTCCGCCTGTCGATTGTTCCACATCTTTGACGCCCTGGCCCATCACCGCCAAGAGAGGTGGCACGGGCTCTCCCTTGCCTTCTTCTTCTTCTTCAAATCAGGAGGAGCAGATTAACAAGAAAAGGGAAATCATTGATGAAGAAGAGAACGACCATACTAATGGTACTCATGATCATCAAATTGACCTAAAGGATTTGACTTCCATGAATAATAAATATCAATGTGTTTTGTGCAACAAATCGTTTTCATCTCATCAAGCATTGGGAGGCCACAAGTCCAGCCACAAAAAAAGGAACAAAACCCACCCACAAAAACCTGAGGATGACCATGTGGTTGCAGTCTTGAATGACATGACTATTAATACTTCCCACTCTATTGGAACAACCATGGAACAACAACCTCAGACGACGCCGTCACCAGAACCGACTCAAAATGGTCGGAGGAGGATGCTGGATGTTGATCTCAATGAGCCTCCACCGGTGGACGACAACGAAAACCAAGGTACAGATAGTATCTAA

mRNA sequence

ATGGATGAAGATAGTAGAAGTTCAAATGGAGAAGAAGGCGAACAAGTGATTGGCAGCCTCAAATGCGAGTTTTGTAACAAAGAGTTTACTTCATGGAAGGCTTTGTATGGTCATATGAGGTCTCATCCGGAGAGGCCATGGAGGGGAATGAAACCCCCAACTTCCTCTTCCTCTTCCTCTGCCGCCGCTTTCCGTGGCGGCTCTCCGCCTGTCGATTGTTCCACATCTTTGACGCCCTGGCCCATCACCGCCAAGAGAGGTGGCACGGGCTCTCCCTTGCCTTCTTCTTCTTCTTCAAATCAGGAGGAGCAGATTAACAAGAAAAGGGAAATCATTGATGAAGAAGAGAACGACCATACTAATGGTACTCATGATCATCAAATTGACCTAAAGGATTTGACTTCCATGAATAATAAATATCAATGTGTTTTGTGCAACAAATCGTTTTCATCTCATCAAGCATTGGGAGGCCACAAGTCCAGCCACAAAAAAAGGAACAAAACCCACCCACAAAAACCTGAGGATGACCATGTGGTTGCAGTCTTGAATGACATGACTATTAATACTTCCCACTCTATTGGAACAACCATGGAACAACAACCTCAGACGACGCCGTCACCAGAACCGACTCAAAATGGTCGGAGGAGGATGCTGGATGTTGATCTCAATGAGCCTCCACCGGTGGACGACAACGAAAACCAAGGTACAGATAGTATCTAA

Coding sequence (CDS)

ATGGATGAAGATAGTAGAAGTTCAAATGGAGAAGAAGGCGAACAAGTGATTGGCAGCCTCAAATGCGAGTTTTGTAACAAAGAGTTTACTTCATGGAAGGCTTTGTATGGTCATATGAGGTCTCATCCGGAGAGGCCATGGAGGGGAATGAAACCCCCAACTTCCTCTTCCTCTTCCTCTGCCGCCGCTTTCCGTGGCGGCTCTCCGCCTGTCGATTGTTCCACATCTTTGACGCCCTGGCCCATCACCGCCAAGAGAGGTGGCACGGGCTCTCCCTTGCCTTCTTCTTCTTCTTCAAATCAGGAGGAGCAGATTAACAAGAAAAGGGAAATCATTGATGAAGAAGAGAACGACCATACTAATGGTACTCATGATCATCAAATTGACCTAAAGGATTTGACTTCCATGAATAATAAATATCAATGTGTTTTGTGCAACAAATCGTTTTCATCTCATCAAGCATTGGGAGGCCACAAGTCCAGCCACAAAAAAAGGAACAAAACCCACCCACAAAAACCTGAGGATGACCATGTGGTTGCAGTCTTGAATGACATGACTATTAATACTTCCCACTCTATTGGAACAACCATGGAACAACAACCTCAGACGACGCCGTCACCAGAACCGACTCAAAATGGTCGGAGGAGGATGCTGGATGTTGATCTCAATGAGCCTCCACCGGTGGACGACAACGAAAACCAAGGTACAGATAGTATCTAA

Protein sequence

MDEDSRSSNGEEGEQVIGSLKCEFCNKEFTSWKALYGHMRSHPERPWRGMKPPTSSSSSSAAAFRGGSPPVDCSTSLTPWPITAKRGGTGSPLPSSSSSNQEEQINKKREIIDEEENDHTNGTHDHQIDLKDLTSMNNKYQCVLCNKSFSSHQALGGHKSSHKKRNKTHPQKPEDDHVVAVLNDMTINTSHSIGTTMEQQPQTTPSPEPTQNGRRRMLDVDLNEPPPVDDNENQGTDSI

Homology

[Close]

BLAST of Lcy11g016690 vs. ExPASy Swiss-Prot
Match: O65499 (Zinc finger protein ZAT3 OS=Arabidopsis thaliana OX=3702 GN=ZAT3 PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.9e-10
Identity = 51/151 (33.77%), Postives = 68/151 (45.03%), Query Frame = 0


Query: 22  CEFCNKEFTSWKALYGHMRSHPERPWRGMKPPTSSSSSSAAAFRGGSPPVDCSTSLTPWP 81
           C  C ++F SWKAL+GHMR HPER WRG+ PP +        +R                
Sbjct: 79  CTECGRKFWSWKALFGHMRCHPERQWRGINPPPN--------YR---------------- 138

Query: 82  ITAKRGGTGSPLPSSSSSNQEEQINKKREIIDEEENDH---------TNGTHDHQIDLKD 141
                      +P+++SS Q  QI         EE DH         +NGT         
Sbjct: 139 -----------VPTAASSKQLNQILPNWVSFMSEE-DHEVASCLLMLSNGTPS------- 185

Query: 142 LTSMNNKYQCVLCNKSFSSHQALGGHKSSHK 164
            +S   +++C  C K F SHQALGGH++SHK
Sbjct: 199 -SSSIERFECGGCKKVFGSHQALGGHRASHK 185

[Close]

BLAST of Lcy11g016690 vs. ExPASy Swiss-Prot
Match: Q9SIJ0 (Zinc finger protein ZAT2 OS=Arabidopsis thaliana OX=3702 GN=ZAT2 PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.8e-08
Identity = 43/142 (30.28%), Postives = 63/142 (44.37%), Query Frame = 0


Query: 22  CEFCNKEFTSWKALYGHMRSHPERPWRGMKPPTSSSSSSAAAFRGGSPPVDCSTSLTPWP 81
           C  C K+F S KAL+GHMR HPER WRG+ PP++                          
Sbjct: 67  CTECGKQFGSLKALFGHMRCHPERQWRGINPPSNFK------------------------ 126

Query: 82  ITAKRGGTGSPLPSSSSSNQEEQINKKREIIDEEENDHTNGTHDHQIDLKDLTSMNNKYQ 141
              +R  + +   SSS    EE+ N    ++     D    +          + +  +++
Sbjct: 127 ---RRINSNAASSSSSWDPSEEEHNIASCLLMMANGDVPTRS----------SEVEERFE 171

Query: 142 CVLCNKSFSSHQALGGHKSSHK 164
           C  C K F SHQALGGH+++HK
Sbjct: 187 CDGCKKVFGSHQALGGHRATHK 171

[Close]

BLAST of Lcy11g016690 vs. ExPASy Swiss-Prot
Match: Q9LFG0 (Zinc finger protein ZAT18 OS=Arabidopsis thaliana OX=3702 GN=ZAT18 PE=2 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 2.7e-04
Identity = 30/84 (35.71%), Postives = 42/84 (50.00%), Query Frame = 0


Query: 127 QIDLK----DLTSMNNKYQCVLCNKSFSSHQALGGHKSSHKK-------RNKTHPQKPED 186
           QID+K      T+ NN ++C  CN+ F S QALGGH++SHKK           H  K  D
Sbjct: 32  QIDVKQSTGSKTNHNNHFECKTCNRKFDSFQALGGHRASHKKPKLIVDQEQVKHRNKEND 91

Query: 187 DHVVAVLNDMTINTSHSIGTTMEQ 200
            H   + + M   T  ++G  M +
Sbjct: 92  MHKCTICDQM-FGTGQALGGHMRK 114

[Close]

BLAST of Lcy11g016690 vs. ExPASy TrEMBL
Match: A0A6J1CQU4 (zinc finger protein ZAT3-like OS=Momordica charantia OX=3673 GN=LOC111013364 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 6.2e-20
Identity = 82/217 (37.79%), Postives = 99/217 (45.62%), Query Frame = 0


Query: 17  IGSLKCEFCNKEFTSWKALYGHMRSHPERPWRGMKPPTSSSSSSAAAFRGGSPPVDCSTS 76
           I S KC  C K F + KALYGHMRSHP+R WRGM P  SSSSSSAAA          ST 
Sbjct: 17  INSSKCGLCGKLFRTMKALYGHMRSHPDRTWRGMHPTPSSSSSSAAA----------STP 76

Query: 77  LTPWPITAKRG--GTGSPLPSSSSSNQEEQINKKREIIDEEENDHTNGTHDHQIDLKDLT 136
           L  W +T +RG   T S   S+S+SN E   + K+++                       
Sbjct: 77  LPTWSVTGRRGRKRTSSAAASTSNSNDEHDSSSKKKV----------------------- 136

Query: 137 SMNNKYQCVLCNKSFSSHQALGGHKSSHKKRNKTHPQKPEDDHVVAVLNDMTINTSHSIG 196
              + Y+C +C K F S QALGGHKSSH K  KT               D  + TS S  
Sbjct: 137 ---HVYRCNVCGKEFWSPQALGGHKSSHYKPEKT---------------DFVVQTSSS-- 161

Query: 197 TTMEQQPQTTPSPEPTQNGRRRMLDVDLNEPPPVDDN 232
                               RR +D DLNE PP+DD+
Sbjct: 197 -------------------GRRTVDFDLNELPPMDDH 161

[Close]

BLAST of Lcy11g016690 vs. ExPASy TrEMBL
Match: A0A1S3BLH2 (LOW QUALITY PROTEIN: uncharacterized protein LOC103491133 OS=Cucumis melo OX=3656 GN=LOC103491133 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 7.6e-18
Identity = 76/225 (33.78%), Postives = 114/225 (50.67%), Query Frame = 0


Query: 21  KCEFCNKEFTSWKALYGHMRSHPERPWRGMKPPTSSSSSSAAAFRGGSPPVDCSTSLTPW 80
           KCE CN+EF S KALYGHMRSHP+R W+G++PP S +SSS+++          S+ L  W
Sbjct: 17  KCEVCNREFNSIKALYGHMRSHPDRSWKGIQPPISIASSSSSS---------SSSPLPSW 76

Query: 81  PITAKRG------GTGSPLPSSSSSNQEEQINKKREI-----IDEEENDHTNGTHDHQID 140
            +TAKRG       T +P  SSS S+  E   K   +     + E++         ++I+
Sbjct: 77  SLTAKRGCKGISCVTAAPSSSSSRSSSSETEAKLESLYSNPDVVEDQRKVKKMKKINEIE 136

Query: 141 LKDLTSMNNKYQCVLCNKSFSSHQALGGHKSSHKKRNKTHPQKPEDDHVVAVLNDMTINT 200
           LK +      Y+C  C K + SHQALGGHKS H+K                  + + + T
Sbjct: 137 LKKV------YKCNSCEKEYLSHQALGGHKSRHRK------------------SKILLRT 194

Query: 201 SHSIGTTMEQQPQTTPSPEPTQNGRRRMLDVDLNEPPPVDDNENQ 235
           S ++ T   Q+              R++L+ DLNE P ++ ++N+
Sbjct: 197 SSNLTTRTHQE--------------RKILNFDLNELPTMEHDDNE 194

[Close]

BLAST of Lcy11g016690 vs. ExPASy TrEMBL
Match: A0A0A0L2N1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G043940 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 7.1e-16
Identity = 69/223 (30.94%), Postives = 108/223 (48.43%), Query Frame = 0


Query: 21  KCEFCNKEFTSWKALYGHMRSHPERPWRGMKPPTSSSSSSAAAFRGGSPPVDCSTSLTPW 80
           KC+ CN+EF S KALYGHMRSHP+R W+G++PP + +SSS+++          S+ L  W
Sbjct: 17  KCKVCNREFNSIKALYGHMRSHPDRSWKGIQPPITIASSSSSS---------SSSPLPSW 76

Query: 81  PITAKRG-------GTGSPLPSSSSSNQEEQINKKREIIDEEENDHTNGTHDHQIDLKDL 140
             TAKRG        T +    SSSS++   +  + ++     +            +K +
Sbjct: 77  SFTAKRGCKGIGCISTAAVAAPSSSSSRSSSLETEAKLESRFSDPDVVEDQRQVKKMKKI 136

Query: 141 T--SMNNKYQCVLCNKSFSSHQALGGHKSSHKKRNKTHPQKPEDDHVVAVLNDMTINTSH 200
               +N  Y+C  C K + SHQALGGHKS H+K                  + + + TS 
Sbjct: 137 NEIELNKVYKCNSCEKEYVSHQALGGHKSRHRK------------------SKILLRTSS 196

Query: 201 SIGTTMEQQPQTTPSPEPTQNGRRRMLDVDLNEPPPVDDNENQ 235
           ++     Q+              R++L+ DLNE P ++D+ N+
Sbjct: 197 NVTNPTHQE--------------RKILNFDLNELPTMEDDNNK 198

[Close]

BLAST of Lcy11g016690 vs. ExPASy TrEMBL
Match: A0A660KMF0 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_010152 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 2.3e-14
Identity = 75/237 (31.65%), Postives = 117/237 (49.37%), Query Frame = 0


Query: 14  EQVIGSLKCEFCNKEFTSWKALYGHMRSHPERPWRGMKPPTSS----SSSSAAAFRGGSP 73
           +Q +  + C  CNK+F S ++L+GHMR+HP+R WRG++PP  S    SSSS      G  
Sbjct: 86  KQRVTKMGCCVCNKDFPSMRSLFGHMRAHPDRDWRGIQPPLQSPLRKSSSSVDDADNGEQ 145

Query: 74  PV--DCSTSLTPWPIT--AKRGGTGSP-----LPSSSSSNQEEQI------NKKREIIDE 133
               D   S++ W  T   +R  TG+      L   +S   E Q+       KK + + E
Sbjct: 146 LTRSDLLKSVSNWSKTERRRRKSTGAVAAAQILVLMASGEHERQVGKRKMNKKKAKFLME 205

Query: 134 EENDHTNGTHDHQIDLKDL-TSMNNKYQCVLCNKSFSSHQALGGHKSSHKKRNKTHPQKP 193
           +  D         ID K++  ++   Y+C+ C++SF + Q LGGH+S H K  K + +  
Sbjct: 206 KLRDSETEEIGLNIDDKNVQKTVAESYKCITCDRSFGTFQGLGGHRSIHNKDIKKNRELK 265

Query: 194 EDDHVVAVLNDMTINTSHSIGTTMEQQPQTTPSP-EPTQNGRRRMLDVDLNEPPPVD 230
           E + + A  +   ++        +   P  +PSP E  Q G RR +D DLN+P  +D
Sbjct: 266 ETNVIAAFADTFRVDEGKESNKPI-PSPSPSPSPGEAIQTGPRRRMDFDLNQPYDMD 321

[Close]

BLAST of Lcy11g016690 vs. ExPASy TrEMBL
Match: A0A2G9GLJ0 (Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_21320 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 6.6e-14
Identity = 84/303 (27.72%), Postives = 120/303 (39.60%), Query Frame = 0


Query: 9   NGEEGEQVIGS---LKCEFCNKEFTSWKALYGHMRSHPERPWRGMKPPTS------SSSS 68
           NG+ G   +GS     C  C +EF S KAL+GHMRSHPER WRGM PP S        SS
Sbjct: 177 NGKRGHNSLGSPAGKYCVICGREFPSRKALFGHMRSHPERQWRGMDPPPSELESSDDDSS 236

Query: 69  SAAAFRGGSPPVDCSTSLTPWPITAKRG---------GTGSPLPSSSSSNQEEQINKKRE 128
            ++     SP  D ++SL  W +TAKRG          T  PLP   S      + K  +
Sbjct: 237 PSSEVAAPSPVADIASSLKGWCVTAKRGRPEISKPSPATADPLPIKDSDMFNNVVQKLVK 296

Query: 129 IIDEEENDHTNGTHD----------HQ---------IDLKDL------------------ 188
            ++ +     N   D          HQ         ID+ ++                  
Sbjct: 297 FMENQSAKQDNEVEDVGSSSLVDDNHQFKKRKTESAIDVAEVKLTEAGSKAEAESRAEAE 356

Query: 189 --------------TSMNNKYQCVLCNKSFSSHQALGGHKSSHKK--------------- 227
                         TS    Y C  CN+SF SHQALGGHKSSH K               
Sbjct: 357 TKAAAENIVQGNCGTSPKQNYVCTTCNRSFHSHQALGGHKSSHNKFKISIINAIDDDLNG 416

[Close]

BLAST of Lcy11g016690 vs. NCBI nr
Match: XP_022143488.1 (zinc finger protein ZAT3-like [Momordica charantia])

HSP 1 Score: 107.8 bits (268), Expect = 1.3e-19
Identity = 82/217 (37.79%), Postives = 99/217 (45.62%), Query Frame = 0


Query: 17  IGSLKCEFCNKEFTSWKALYGHMRSHPERPWRGMKPPTSSSSSSAAAFRGGSPPVDCSTS 76
           I S KC  C K F + KALYGHMRSHP+R WRGM P  SSSSSSAAA          ST 
Sbjct: 17  INSSKCGLCGKLFRTMKALYGHMRSHPDRTWRGMHPTPSSSSSSAAA----------STP 76

Query: 77  LTPWPITAKRG--GTGSPLPSSSSSNQEEQINKKREIIDEEENDHTNGTHDHQIDLKDLT 136
           L  W +T +RG   T S   S+S+SN E   + K+++                       
Sbjct: 77  LPTWSVTGRRGRKRTSSAAASTSNSNDEHDSSSKKKV----------------------- 136

Query: 137 SMNNKYQCVLCNKSFSSHQALGGHKSSHKKRNKTHPQKPEDDHVVAVLNDMTINTSHSIG 196
              + Y+C +C K F S QALGGHKSSH K  KT               D  + TS S  
Sbjct: 137 ---HVYRCNVCGKEFWSPQALGGHKSSHYKPEKT---------------DFVVQTSSS-- 161

Query: 197 TTMEQQPQTTPSPEPTQNGRRRMLDVDLNEPPPVDDN 232
                               RR +D DLNE PP+DD+
Sbjct: 197 -------------------GRRTVDFDLNELPPMDDH 161

[Close]

BLAST of Lcy11g016690 vs. NCBI nr
Match: XP_008449183.1 (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103491133 [Cucumis melo])

HSP 1 Score: 100.9 bits (250), Expect = 1.6e-17
Identity = 76/225 (33.78%), Postives = 114/225 (50.67%), Query Frame = 0


Query: 21  KCEFCNKEFTSWKALYGHMRSHPERPWRGMKPPTSSSSSSAAAFRGGSPPVDCSTSLTPW 80
           KCE CN+EF S KALYGHMRSHP+R W+G++PP S +SSS+++          S+ L  W
Sbjct: 17  KCEVCNREFNSIKALYGHMRSHPDRSWKGIQPPISIASSSSSS---------SSSPLPSW 76

Query: 81  PITAKRG------GTGSPLPSSSSSNQEEQINKKREI-----IDEEENDHTNGTHDHQID 140
            +TAKRG       T +P  SSS S+  E   K   +     + E++         ++I+
Sbjct: 77  SLTAKRGCKGISCVTAAPSSSSSRSSSSETEAKLESLYSNPDVVEDQRKVKKMKKINEIE 136

Query: 141 LKDLTSMNNKYQCVLCNKSFSSHQALGGHKSSHKKRNKTHPQKPEDDHVVAVLNDMTINT 200
           LK +      Y+C  C K + SHQALGGHKS H+K                  + + + T
Sbjct: 137 LKKV------YKCNSCEKEYLSHQALGGHKSRHRK------------------SKILLRT 194

Query: 201 SHSIGTTMEQQPQTTPSPEPTQNGRRRMLDVDLNEPPPVDDNENQ 235
           S ++ T   Q+              R++L+ DLNE P ++ ++N+
Sbjct: 197 SSNLTTRTHQE--------------RKILNFDLNELPTMEHDDNE 194

[Close]

BLAST of Lcy11g016690 vs. NCBI nr
Match: KGN55978.1 (hypothetical protein Csa_010625 [Cucumis sativus])

HSP 1 Score: 94.4 bits (233), Expect = 1.5e-15
Identity = 69/223 (30.94%), Postives = 108/223 (48.43%), Query Frame = 0


Query: 21  KCEFCNKEFTSWKALYGHMRSHPERPWRGMKPPTSSSSSSAAAFRGGSPPVDCSTSLTPW 80
           KC+ CN+EF S KALYGHMRSHP+R W+G++PP + +SSS+++          S+ L  W
Sbjct: 17  KCKVCNREFNSIKALYGHMRSHPDRSWKGIQPPITIASSSSSS---------SSSPLPSW 76

Query: 81  PITAKRG-------GTGSPLPSSSSSNQEEQINKKREIIDEEENDHTNGTHDHQIDLKDL 140
             TAKRG        T +    SSSS++   +  + ++     +            +K +
Sbjct: 77  SFTAKRGCKGIGCISTAAVAAPSSSSSRSSSLETEAKLESRFSDPDVVEDQRQVKKMKKI 136

Query: 141 T--SMNNKYQCVLCNKSFSSHQALGGHKSSHKKRNKTHPQKPEDDHVVAVLNDMTINTSH 200
               +N  Y+C  C K + SHQALGGHKS H+K                  + + + TS 
Sbjct: 137 NEIELNKVYKCNSCEKEYVSHQALGGHKSRHRK------------------SKILLRTSS 196

Query: 201 SIGTTMEQQPQTTPSPEPTQNGRRRMLDVDLNEPPPVDDNENQ 235
           ++     Q+              R++L+ DLNE P ++D+ N+
Sbjct: 197 NVTNPTHQE--------------RKILNFDLNELPTMEDDNNK 198

[Close]

BLAST of Lcy11g016690 vs. NCBI nr
Match: KAE8037573.1 (hypothetical protein FH972_010152 [Carpinus fangiana])

HSP 1 Score: 89.4 bits (220), Expect = 4.7e-14
Identity = 75/237 (31.65%), Postives = 117/237 (49.37%), Query Frame = 0


Query: 14  EQVIGSLKCEFCNKEFTSWKALYGHMRSHPERPWRGMKPPTSS----SSSSAAAFRGGSP 73
           +Q +  + C  CNK+F S ++L+GHMR+HP+R WRG++PP  S    SSSS      G  
Sbjct: 86  KQRVTKMGCCVCNKDFPSMRSLFGHMRAHPDRDWRGIQPPLQSPLRKSSSSVDDADNGEQ 145

Query: 74  PV--DCSTSLTPWPIT--AKRGGTGSP-----LPSSSSSNQEEQI------NKKREIIDE 133
               D   S++ W  T   +R  TG+      L   +S   E Q+       KK + + E
Sbjct: 146 LTRSDLLKSVSNWSKTERRRRKSTGAVAAAQILVLMASGEHERQVGKRKMNKKKAKFLME 205

Query: 134 EENDHTNGTHDHQIDLKDL-TSMNNKYQCVLCNKSFSSHQALGGHKSSHKKRNKTHPQKP 193
           +  D         ID K++  ++   Y+C+ C++SF + Q LGGH+S H K  K + +  
Sbjct: 206 KLRDSETEEIGLNIDDKNVQKTVAESYKCITCDRSFGTFQGLGGHRSIHNKDIKKNRELK 265

Query: 194 EDDHVVAVLNDMTINTSHSIGTTMEQQPQTTPSP-EPTQNGRRRMLDVDLNEPPPVD 230
           E + + A  +   ++        +   P  +PSP E  Q G RR +D DLN+P  +D
Sbjct: 266 ETNVIAAFADTFRVDEGKESNKPI-PSPSPSPSPGEAIQTGPRRRMDFDLNQPYDMD 321

[Close]

BLAST of Lcy11g016690 vs. NCBI nr
Match: KAG6596792.1 (Zinc finger protein ZAT3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 88.2 bits (217), Expect = 1.0e-13
Identity = 66/176 (37.50%), Postives = 85/176 (48.30%), Query Frame = 0


Query: 12  EGEQVIGSLKCEFCNKEFTSWKALYGHMRSHPERPWRGMKPPTSSSSSSAAAFRGGS--- 71
           +G       KC FC  EF S KAL+GHMRSHPER WRGM PP S+++++AA    GS   
Sbjct: 14  DGSDRKSRFKCGFCGSEFRSEKALHGHMRSHPERNWRGMNPPVSAAAAAAAVAATGSFSS 73

Query: 72  -----------PPVDCSTSLTPWPITAKRGGTGSPLPSSSSSNQEEQINKKREIIDEEEN 131
                         DC + L  W  TA RG    P+ SSSS++          ++D  + 
Sbjct: 74  SSSSGGVDHEVRDRDCYSPLLTWSTTACRG--RRPIGSSSSASS--------GVVDATDT 133

Query: 132 DHTNGTHDHQIDLKDLTSMNNKYQCVLCNKSFSSHQALGGHKSSHK-KRNKTHPQK 173
              N              + N+Y C  C K+F+S QALGGHKSS   K  K  PQ+
Sbjct: 134 GKENTD----------ALLRNEYPCDFCGKAFASPQALGGHKSSCPCKPRKNGPQE 169

[Close]

BLAST of Lcy11g016690 vs. TAIR 10
Match: AT4G35280.1 (C2H2-like zinc finger protein )

HSP 1 Score: 67.8 bits (164), Expect = 1.4e-11
Identity = 51/151 (33.77%), Postives = 68/151 (45.03%), Query Frame = 0


Query: 22  CEFCNKEFTSWKALYGHMRSHPERPWRGMKPPTSSSSSSAAAFRGGSPPVDCSTSLTPWP 81
           C  C ++F SWKAL+GHMR HPER WRG+ PP +        +R                
Sbjct: 79  CTECGRKFWSWKALFGHMRCHPERQWRGINPPPN--------YR---------------- 138

Query: 82  ITAKRGGTGSPLPSSSSSNQEEQINKKREIIDEEENDH---------TNGTHDHQIDLKD 141
                      +P+++SS Q  QI         EE DH         +NGT         
Sbjct: 139 -----------VPTAASSKQLNQILPNWVSFMSEE-DHEVASCLLMLSNGTPS------- 185

Query: 142 LTSMNNKYQCVLCNKSFSSHQALGGHKSSHK 164
            +S   +++C  C K F SHQALGGH++SHK
Sbjct: 199 -SSSIERFECGGCKKVFGSHQALGGHRASHK 185

[Close]

BLAST of Lcy11g016690 vs. TAIR 10
Match: AT2G17180.1 (C2H2-like zinc finger protein )

HSP 1 Score: 61.2 bits (147), Expect = 1.3e-09
Identity = 43/142 (30.28%), Postives = 63/142 (44.37%), Query Frame = 0


Query: 22  CEFCNKEFTSWKALYGHMRSHPERPWRGMKPPTSSSSSSAAAFRGGSPPVDCSTSLTPWP 81
           C  C K+F S KAL+GHMR HPER WRG+ PP++                          
Sbjct: 67  CTECGKQFGSLKALFGHMRCHPERQWRGINPPSNFK------------------------ 126

Query: 82  ITAKRGGTGSPLPSSSSSNQEEQINKKREIIDEEENDHTNGTHDHQIDLKDLTSMNNKYQ 141
              +R  + +   SSS    EE+ N    ++     D    +          + +  +++
Sbjct: 127 ---RRINSNAASSSSSWDPSEEEHNIASCLLMMANGDVPTRS----------SEVEERFE 171

Query: 142 CVLCNKSFSSHQALGGHKSSHK 164
           C  C K F SHQALGGH+++HK
Sbjct: 187 CDGCKKVFGSHQALGGHRATHK 171

[Close]

BLAST of Lcy11g016690 vs. TAIR 10
Match: AT5G56200.1 (C2H2 type zinc finger transcription factor family )

HSP 1 Score: 58.5 bits (140), Expect = 8.3e-09
Identity = 76/299 (25.42%), Postives = 114/299 (38.13%), Query Frame = 0


Query: 9   NGEEGEQVIGSLK--CEFCNKEFTSWKALYGHMRSHPERPWRGMKPP---------TSSS 68
           +G  G    G L+  C  C K+FTS KALYGHMR HP+R W+G+ PP          SSS
Sbjct: 117 SGMVGRSERGDLEVACCVCYKKFTSMKALYGHMRFHPDRGWKGVLPPPPLLPHPLGNSSS 176

Query: 69  SS----------------------------SAAAFRGGSPPVDCSTSLTPWPITAKRGGT 128
           S+                            ++  +       +   S+  W    KRG  
Sbjct: 177 STLDHDDEFISSDYDDDDDFDDDDDDDDDENSELWDSNLELENVVESIKGWSTKGKRGRR 236

Query: 129 GS-----------PL-----------------------------PSSSSSNQEEQI---- 188
           G            PL                              S+S S +E+ +    
Sbjct: 237 GDLKFDEADLKDPPLEDVKDIDDANGLLFLATTAEAAANLNVAETSASRSVEEKYLEMVK 296

Query: 189 ---NKKREIIDEEENDHTNGTHDHQIDLKDLTS--------MNNKYQCVLCNKSFSSHQA 214
               K++ + + E+   T+  HDHQ+D   + +           K+ CV CNKSFSS+QA
Sbjct: 297 KRKKKQKRLSEMEKESSTSTHHDHQLDQVVVVAAEEGGGAGAREKHVCVTCNKSFSSYQA 356

[Close]

BLAST of Lcy11g016690 vs. TAIR 10
Match: AT2G26940.1 (C2H2-type zinc finger family protein )

HSP 1 Score: 45.8 bits (107), Expect = 5.6e-05
Identity = 45/216 (20.83%), Postives = 87/216 (40.28%), Query Frame = 0


Query: 16  VIGSLKCEFCNKEFTSWKALYGHMRSHPERPWRGMKPPTSSSSSSAAAFRGGSPPVDCST 75
           V G ++C  C KEF +  +L+GHMR HP+R W+G++PP               PP     
Sbjct: 115 VEGKIRCCLCGKEFQTMHSLFGHMRRHPDRTWKGIRPP---------------PP----- 174

Query: 76  SLTPWPITAKRGGTGSPLPSSSSSNQEEQINKKREIIDEEENDHTNGTHDHQIDLKDLTS 135
                                   +++  ++   + +D+E+ D  +      + + D+  
Sbjct: 175 ------------------------SEKFNLSYLDDDVDDEDED-DDDVMSRSMMMSDVPE 234

Query: 136 MNNKYQCVLCNKSFSSHQALGGHKSSHKKRNKTHPQKPEDDHVVAVLNDMTINTSHSIGT 195
                 C+L   S++S     G + S K   ++     +D+    VL D  ++    +  
Sbjct: 235 DVQGAACILMMLSYASRNYWAGIEESPKSEVRSSSFYKDDEGKDKVLGDSRMDEKKGLIV 285

Query: 196 TMEQQPQTTPSPEPTQNGRRRMLDVDLNEPPPVDDN 232
            M+ + +        ++  +R L  DLN+PP  +D+
Sbjct: 295 DMKIKMEMEVKVNSPRDEAKRSLGFDLNQPPYHEDH 285

The following BLAST results are available for this feature:

BLAST of Lcy11g016690 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65499	1.9e-10	33.77	Zinc finger protein ZAT3 OS=Arabidopsis thaliana OX=3702 GN=ZAT3 PE=1 SV=1	[more]
Q9SIJ0	1.8e-08	30.28	Zinc finger protein ZAT2 OS=Arabidopsis thaliana OX=3702 GN=ZAT2 PE=1 SV=1	[more]
Q9LFG0	2.7e-04	35.71	Zinc finger protein ZAT18 OS=Arabidopsis thaliana OX=3702 GN=ZAT18 PE=2 SV=1	[more]

BLAST of Lcy11g016690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CQU4	6.2e-20	37.79	zinc finger protein ZAT3-like OS=Momordica charantia OX=3673 GN=LOC111013364 PE=...	[more]
A0A1S3BLH2	7.6e-18	33.78	LOW QUALITY PROTEIN: uncharacterized protein LOC103491133 OS=Cucumis melo OX=365...	[more]
A0A0A0L2N1	7.1e-16	30.94	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G043940 PE=4 SV=1	[more]
A0A660KMF0	2.3e-14	31.65	Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_010152 PE=4 SV=1	[more]
A0A2G9GLJ0	6.6e-14	27.72	Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_21320 P...	[more]

BLAST of Lcy11g016690 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143488.1	1.3e-19	37.79	zinc finger protein ZAT3-like [Momordica charantia]	[more]
XP_008449183.1	1.6e-17	33.78	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103491133 [Cucumis me...	[more]
KGN55978.1	1.5e-15	30.94	hypothetical protein Csa_010625 [Cucumis sativus]	[more]
KAE8037573.1	4.7e-14	31.65	hypothetical protein FH972_010152 [Carpinus fangiana]	[more]
KAG6596792.1	1.0e-13	37.50	Zinc finger protein ZAT3, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Lcy11g016690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35280.1	1.4e-11	33.77	C2H2-like zinc finger protein	[more]
AT2G17180.1	1.3e-09	30.28	C2H2-like zinc finger protein	[more]
AT5G56200.1	8.3e-09	25.42	C2H2 type zinc finger transcription factor family	[more]
AT2G26940.1	5.6e-05	20.83	C2H2-type zinc finger family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 98..118
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 118..199 e-value: 2.9E-5 score: 25.8
None	No IPR available	PFAM	PF13912	zf-C2H2_6	coord: 140..164 e-value: 1.2E-7 score: 31.5 coord: 21..44 e-value: 8.1E-6 score: 25.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 189..211
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 189..239
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 152..177
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..106
None	No IPR available	PANTHER	PTHR45988:SF18	C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY	coord: 6..232
IPR013087	Zinc finger C2H2-type	SMART	SM00355	c2h2final6	coord: 20..42 e-value: 2.0E-4 score: 30.7 coord: 140..162 e-value: 0.046 score: 22.9
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 22..42
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 142..162
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 20..42 score: 9.930481
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 140..167 score: 10.637106
IPR044653	C2H2-type zinc-finger protein AZF1/2/3-like	PANTHER	PTHR45988	C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED	coord: 6..232
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 21..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g016690.1	Lcy11g016690.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003700	DNA-binding transcription factor activity