Lcy11g015500 (gene) Sponge gourd (P93075) v1

Overview
NameLcy11g015500
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRNase H domain-containing protein
LocationChr11: 36675154 .. 36676324 (-)
RNA-Seq ExpressionLcy11g015500
SyntenyLcy11g015500
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGACTTACTGCGCCAACACTTCAGCCCCCACGAGGTAAGTCTTATCTTATTTATTCCTATTAGGCGGCCTGGTGCATATGACTCCCTTATTTGGCATTTTGAAAATTCTGGCATATATTCTGTTAGGAGTGGATATCGTGTAGGCCGGATGCCTTATCTGGCACAATGCCCATCATCCTCCTCGCTCTCTCGGCTTGGTTAGTGGAATGGATGCTGGAAAATGACAATCCCAAGTAAGATTAAAATTTTCTTCTGGCGTATGTGTTTGGACCGTCTCCCGACTATTGATAACTTGCTTAAAATAGGGGTTGATGTGGTGAACGTTTGTTCCTTTTGTGGGTGTCAAGGAGAGTCTTCATTGCATGTTTTCTGGCTTTGCAAATTTTCTAGGAATGTTATTTGTGATGCTGGTTTTGGCTCTCTTGTGGATAGGCTTAGAACGGATAATCTCTTCCTGGTGTTGAGAGATGCGATGGACAATCTCGACTGGAACGGTTTGAATCTTTTGTGGTGCTATTATGGGCCATTTGGGGTCGCAGAAATCGTGTGCTTTTTAAGGGAGAGAGTCCGTCAGGGGAATTACCTGCTTGGTCGGTTAGGCTACTTGATTCATATAGGCGTGCTAATGCTCAATCGACGATTGGAGTGAGGGGCGGGGCTGGCAGAGATGCTGTGAAATGGGTTGTGCCGCCGGAAGGGTGGTACAAATTGAATGTAGACGCCGCCTTCAATGGTAAGAAATGGATTGTTGGGGTGGGTCTGTGCATGAGGAATAGCGGTGGGGAAGCGATGGCTTCAGCTGTGAGGTTGCATGAATTTGTAAGGGACTCGGATTTTGCAGAAGGTTGGGCGATGGGCGATGGTTTGAGTTTCGCGGCTGAGATGGATTTTTTCCCTGTGATGTTTGAGACGAATTCTAAGCGGGTTTGTGAGTTAATGAGAGGCAAGAGGGAGGAGCTATCTGATCTGAAATGTGTAGTTGCTGATGCTTTGGAGACTTGGCTATCATCATGGCCGTTGCAATTTGTCTTCTCGTTCCGTGAAGGGAACCGTCTGGCTCATCATTTGGCTAGATTAGCTTTGCGTGATCAACTTGATTTTGTGTGGTTTGAAGAAGTGTCTTCATGTGCAGAGAATATTTTACTTCTTGATTCTATTTCTCTGTAA

mRNA sequence

ATGTGGACTTACTGCGCCAACACTTCAGCCCCCACGAGGCCGGATGCCTTATCTGGCACAATGCCCATCATCCTCCTCGCTCTCTCGGCTTGGTTAGTGGAATGGATGCTGGAAAATGACAATCCCAAGAATGTTATTTGTGATGCTGGTTTTGGCTCTCTTGTGGATAGGCTTAGAACGGATAATCTCTTCCTGGTGTTGAGAGATGCGATGGACAATCTCGACTGGAACGGGGAATTACCTGCTTGGTCGGTTAGGCTACTTGATTCATATAGGCGTGCTAATGCTCAATCGACGATTGGAGTGAGGGGCGGGGCTGGCAGAGATGCTGTGAAATGGGTTGTGCCGCCGGAAGGGTGGTACAAATTGAATGTAGACGCCGCCTTCAATGGTAAGAAATGGATTGTTGGGGTGGGTCTGTGCATGAGGAATAGCGGTGGGGAAGCGATGGCTTCAGCTGTGAGGTTGCATGAATTTGTAAGGGACTCGGATTTTGCAGAAGGTTGGGCGATGGGCGATGGTTTGAGTTTCGCGGCTGAGATGGATTTTTTCCCTGTGATGTTTGAGACGAATTCTAAGCGGGTTTGTGAGTTAATGAGAGGCAAGAGGGAGGAGCTATCTGATCTGAAATGTGTAGTTGCTGATGCTTTGGAGACTTGGCTATCATCATGGCCGTTGCAATTTGTCTTCTCGTTCCGTGAAGGGAACCGTCTGGCTCATCATTTGGCTAGATTAGCTTTGCGTGATCAACTTGATTTTGTGTGGTTTGAAGAAGTGTCTTCATGTGCAGAGAATATTTTACTTCTTGATTCTATTTCTCTGTAA

Coding sequence (CDS)

ATGTGGACTTACTGCGCCAACACTTCAGCCCCCACGAGGCCGGATGCCTTATCTGGCACAATGCCCATCATCCTCCTCGCTCTCTCGGCTTGGTTAGTGGAATGGATGCTGGAAAATGACAATCCCAAGAATGTTATTTGTGATGCTGGTTTTGGCTCTCTTGTGGATAGGCTTAGAACGGATAATCTCTTCCTGGTGTTGAGAGATGCGATGGACAATCTCGACTGGAACGGGGAATTACCTGCTTGGTCGGTTAGGCTACTTGATTCATATAGGCGTGCTAATGCTCAATCGACGATTGGAGTGAGGGGCGGGGCTGGCAGAGATGCTGTGAAATGGGTTGTGCCGCCGGAAGGGTGGTACAAATTGAATGTAGACGCCGCCTTCAATGGTAAGAAATGGATTGTTGGGGTGGGTCTGTGCATGAGGAATAGCGGTGGGGAAGCGATGGCTTCAGCTGTGAGGTTGCATGAATTTGTAAGGGACTCGGATTTTGCAGAAGGTTGGGCGATGGGCGATGGTTTGAGTTTCGCGGCTGAGATGGATTTTTTCCCTGTGATGTTTGAGACGAATTCTAAGCGGGTTTGTGAGTTAATGAGAGGCAAGAGGGAGGAGCTATCTGATCTGAAATGTGTAGTTGCTGATGCTTTGGAGACTTGGCTATCATCATGGCCGTTGCAATTTGTCTTCTCGTTCCGTGAAGGGAACCGTCTGGCTCATCATTTGGCTAGATTAGCTTTGCGTGATCAACTTGATTTTGTGTGGTTTGAAGAAGTGTCTTCATGTGCAGAGAATATTTTACTTCTTGATTCTATTTCTCTGTAA

Protein sequence

MWTYCANTSAPTRPDALSGTMPIILLALSAWLVEWMLENDNPKNVICDAGFGSLVDRLRTDNLFLVLRDAMDNLDWNGELPAWSVRLLDSYRRANAQSTIGVRGGAGRDAVKWVVPPEGWYKLNVDAAFNGKKWIVGVGLCMRNSGGEAMASAVRLHEFVRDSDFAEGWAMGDGLSFAAEMDFFPVMFETNSKRVCELMRGKREELSDLKCVVADALETWLSSWPLQFVFSFREGNRLAHHLARLALRDQLDFVWFEEVSSCAENILLLDSISL
Homology
BLAST of Lcy11g015500 vs. ExPASy TrEMBL
Match: A0A6J1CIF1 (uncharacterized protein LOC111011237 OS=Momordica charantia OX=3673 GN=LOC111011237 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.6e-19
Identity = 64/190 (33.68%), Postives = 95/190 (50.00%), Query Frame = 0

Query: 79  ELPAWSVRLLDSYRRANAQSTIGVRGGAGRDAVKWVVPPEGWYKLNVDAAFNGKKWIVGV 138
           +L  W+ + +  +R AN+    G         V W+ P +  YK+N DA+F       G+
Sbjct: 2   KLVEWANKYVMEFREANSNPFPGRVTNTAE--VLWLPPDKRIYKINTDASFLASDQHAGL 61

Query: 139 GLCMRNSGGEAMASAVRLHEFVRDSDFAEGWAMGDGLSFAAEMDFFPVMFETNSKRVCEL 198
           G+ +RN  G+ MASA +  E ++  D AE     +GL  A+++   PV+ ET+S R+  L
Sbjct: 62  GIIIRNDRGQVMASATKYLENIQSVDMAEAIVAVEGLQLASKIGVNPVILETDSSRIFNL 121

Query: 199 MRGKREELSDLKCVVADALETWLSSWPLQFVFSFREGNRLAHHLARLALRDQLDFVWFE- 258
                E+LS+   +V  A   W  S    F F  REGN+ AH LAR AL  +   +W E 
Sbjct: 122 FSQPSEDLSETGEIVLKAKNFWTQSLHASFNFVKREGNKAAHMLARRALLLREFSIWMED 181

Query: 259 ---EVSSCAE 265
              E+ SC E
Sbjct: 182 WPLELKSCLE 189

BLAST of Lcy11g015500 vs. ExPASy TrEMBL
Match: V4UMR3 (RNase H domain-containing protein (Fragment) OS=Citrus clementina OX=85681 GN=CICLE_v10027161mg PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 8.7e-18
Identity = 53/148 (35.81%), Postives = 83/148 (56.08%), Query Frame = 0

Query: 113 WVVPPEGWYKLNVDAAFNGKKWIVGVGLCMRNSGGEAMASAVRLHEFVRDSDFAEGWAMG 172
           W  PP  WYK+NVDAA +  +   G+G+ + NS GE MA+++    F RD +F E  A+ 
Sbjct: 3   WQSPPPSWYKVNVDAAVSSTEDRAGIGVLVCNSTGEVMAASICTVIFSRDIEFVEAVAVH 62

Query: 173 DGLSFAAEMDFFPVMFETNSKRVCELMRGKREELSDLKCVVADALETWLSS-WPLQFVFS 232
           +GL    ++   P + E++S  V  L+  K     ++  +++D  E   SS    Q  F+
Sbjct: 63  NGLQLVMDIGLAPAIIESDSFNVVNLINNKIHSRCEVGWLISDVQEVLSSSESSFQVKFA 122

Query: 233 FREGNRLAHHLARLALRDQLDFVWFEEV 260
            R  N +AHHL++LAL + ++ VW EEV
Sbjct: 123 PRSCNEVAHHLSKLALCNSMEKVWLEEV 150

BLAST of Lcy11g015500 vs. ExPASy TrEMBL
Match: A0A5C7HKD5 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_018677 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 4.3e-17
Identity = 58/189 (30.69%), Postives = 93/189 (49.21%), Query Frame = 0

Query: 83  WSVRLLDSYRRANAQSTIGVRGGAGRDAV---KWVVPPEGWYKLNVDAAFNGKKWIVGVG 142
           W+ + +D ++ AN + T    G   R+ +   KW  PP G +KLN DAA    +  VG G
Sbjct: 110 WATKFVDKFQAANNKGT----GSQRREQIERPKWQCPPSGMFKLNTDAALLATQMKVGFG 169

Query: 143 LCMRNSGGEAMASAVRLHEFVRDSDFAEGWAMGDGLSFAAEMDFFPVMFETNSKRVCELM 202
           + +R+  G  M S+++          AE  A+  G++FA E  F P++ E+++K V E++
Sbjct: 170 IIIRDDTGAVMGSSIQPALATVTPQAAEAMAIYRGITFAVETGFLPLVVESDAKGVVEMI 229

Query: 203 RGKREELSDLKCVVADALETWLSSW-PLQFVFSFREGNRLAHHLARLALRDQLDFVWFEE 262
                  ++   V+AD L    SS  P+   FS R  N +AH LA LA R    + W   
Sbjct: 230 NKGVPSDAEYGVVIADILSLINSSLVPISVTFSSRNSNGVAHELANLAARATCSYFWMYS 289

Query: 263 VSSCAENIL 268
                E+++
Sbjct: 290 CPPQVESLV 294

BLAST of Lcy11g015500 vs. ExPASy TrEMBL
Match: A0A5B6X0L3 (Reverse transcriptase OS=Gossypium australe OX=47621 GN=EPI10_031605 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 4.3e-17
Identity = 61/205 (29.76%), Postives = 95/205 (46.34%), Query Frame = 0

Query: 62  NLFLVLRDAMDNLDWNGELPAWSVR--------LLDSYRRANAQSTIGVRGGAGRDAVKW 121
           N+ L+ + +   L+  G L A  +R         L++   AN      ++    RD  KW
Sbjct: 206 NIALLAKQSWRLLENPGLLTAQLIRAKYCNGSNFLEASLGANPSLVCALKHPRPRDLNKW 265

Query: 122 VVPPEGWYKLNVDAAFNGKKWIVGVGLCMRNSGGEAMASAVRLHEFVRDSDFAEGWAMGD 181
            +PP  W K+NVD  F+  +     G  +RN     M S  R H  VR    AE   +  
Sbjct: 266 GLPPPNWVKINVDTGFSAARQHAASGFIIRNDEWLIMGSGFRTHNLVRSVVLAEATVVLH 325

Query: 182 GLSFAAEMDFFPVMFETNSKRVCELMRGKREELSDLKCVVADALETWLSSWPLQFVFSFR 241
           GL FA EM F  V+ E++ K V + ++  +E+ S+++ +  DA     +    +F F  R
Sbjct: 326 GLHFAPEMGFSNVILESDPKLVIQNLQSSKEDYSEIRPLTWDAKALTRNFSSCRFEFVAR 385

Query: 242 EGNRLAHHLARLALRDQLDFVWFEE 259
           +GN  AH +A   L+   DF W E+
Sbjct: 386 DGNSAAHAMAVEGLKRYEDFFWVED 410

BLAST of Lcy11g015500 vs. ExPASy TrEMBL
Match: A0A2I4ENH2 (uncharacterized protein LOC108991215 OS=Juglans regia OX=51240 GN=LOC108991215 PE=4 SV=2)

HSP 1 Score: 96.3 bits (238), Expect = 2.1e-16
Identity = 63/206 (30.58%), Postives = 104/206 (50.49%), Query Frame = 0

Query: 72  DNLDWN-GELPAWSVRLLDSYRRANAQSTIGVRGGAGRDAVK--WVVPPEGWYKLNVDAA 131
           +N  W  G +   +V  L+ Y   N + T G+  G G D  K  W  P +  +K+N D A
Sbjct: 116 ENKFWRPGNVVQMAVTGLEDYYSVNEKKT-GLNKGKGEDRGKSHWRCPVDVDFKVNFDGA 175

Query: 132 FNGKKWIVGVGLCMRNSGGEAMASAVRLHEFVRDSDFAEGWAMGDGLSFAAEMDFFPVMF 191
           F+     +G+G+ +R+  GE +A+        +++  AEG A+   + F  E+    V F
Sbjct: 176 FDQSSSKIGMGVVIRDKKGEVVAALSASRREGQNAFVAEGMALWRAMEFCLEIGMVDVEF 235

Query: 192 ETNSKRVCELMRGKREELSDLKCVVAD--ALETWLSSWPLQFVFSFREGNRLAHHLARLA 251
           + +SK + E +    EE S    +V D   L    S+W  + VF++RE N +AH+LA++A
Sbjct: 236 DGDSKELIEAVMSDEEEDSRWGQIVEDIKQLRHQYSNW--KVVFNYRESNEVAHNLAKMA 295

Query: 252 LRDQLDFVWFEEVSSCAENILLLDSI 273
           L    + VW EEV S     ++ D++
Sbjct: 296 LLFDEELVWIEEVPSSIHQYIVKDNL 318

BLAST of Lcy11g015500 vs. NCBI nr
Match: XP_022140628.1 (uncharacterized protein LOC111011237 [Momordica charantia])

HSP 1 Score: 106.7 bits (265), Expect = 3.3e-19
Identity = 64/190 (33.68%), Postives = 95/190 (50.00%), Query Frame = 0

Query: 79  ELPAWSVRLLDSYRRANAQSTIGVRGGAGRDAVKWVVPPEGWYKLNVDAAFNGKKWIVGV 138
           +L  W+ + +  +R AN+    G         V W+ P +  YK+N DA+F       G+
Sbjct: 2   KLVEWANKYVMEFREANSNPFPGRVTNTAE--VLWLPPDKRIYKINTDASFLASDQHAGL 61

Query: 139 GLCMRNSGGEAMASAVRLHEFVRDSDFAEGWAMGDGLSFAAEMDFFPVMFETNSKRVCEL 198
           G+ +RN  G+ MASA +  E ++  D AE     +GL  A+++   PV+ ET+S R+  L
Sbjct: 62  GIIIRNDRGQVMASATKYLENIQSVDMAEAIVAVEGLQLASKIGVNPVILETDSSRIFNL 121

Query: 199 MRGKREELSDLKCVVADALETWLSSWPLQFVFSFREGNRLAHHLARLALRDQLDFVWFE- 258
                E+LS+   +V  A   W  S    F F  REGN+ AH LAR AL  +   +W E 
Sbjct: 122 FSQPSEDLSETGEIVLKAKNFWTQSLHASFNFVKREGNKAAHMLARRALLLREFSIWMED 181

Query: 259 ---EVSSCAE 265
              E+ SC E
Sbjct: 182 WPLELKSCLE 189

BLAST of Lcy11g015500 vs. NCBI nr
Match: XP_024046691.1 (uncharacterized protein LOC112101027 [Citrus clementina])

HSP 1 Score: 101.3 bits (251), Expect = 1.4e-17
Identity = 57/176 (32.39%), Postives = 98/176 (55.68%), Query Frame = 0

Query: 87  LLDSYRRANAQSTIGVRGGAGRDAVKWVVPPEGWYKLNVDAAFNGKKWIVGVGLCMRNSG 146
           ++ SY R       G    +  +  +W  PPEGW+K+NVDAA   ++   G+G+ +RNS 
Sbjct: 100 MVQSYSRIQMPQMQGNSQQSTANQKQWKHPPEGWFKVNVDAAVRVEQQRTGMGIVIRNSR 159

Query: 147 GEAMASAVRLHEFVRDSDFAEGWAMGDGLSFAAEMDFFPVMFETNSKRVCELMRGKREEL 206
           G+ MA+A++  +F+   D+A+  A+  GL  A  +  FP++ E++S+ V +L+  K    
Sbjct: 160 GKVMAAAMKPSKFIGKVDYAKAEAIRFGLEIAENVRCFPLIVESDSQEVVDLINSKTSSR 219

Query: 207 SDLKCVVADALETWLSSWPLQFVFSFREGNRLAHHLARLALRDQLDFV-WFEEVSS 262
           +++  V ++  +       ++   + R  N LAH LARLAL +Q DFV W + + S
Sbjct: 220 AEIFWVASEVQDRMKRLNQVKVQHTPRGCNTLAHSLARLAL-EQTDFVFWVDNIPS 274

BLAST of Lcy11g015500 vs. NCBI nr
Match: ESR40694.1 (hypothetical protein CICLE_v10027161mg, partial [Citrus clementina])

HSP 1 Score: 100.9 bits (250), Expect = 1.8e-17
Identity = 53/148 (35.81%), Postives = 83/148 (56.08%), Query Frame = 0

Query: 113 WVVPPEGWYKLNVDAAFNGKKWIVGVGLCMRNSGGEAMASAVRLHEFVRDSDFAEGWAMG 172
           W  PP  WYK+NVDAA +  +   G+G+ + NS GE MA+++    F RD +F E  A+ 
Sbjct: 3   WQSPPPSWYKVNVDAAVSSTEDRAGIGVLVCNSTGEVMAASICTVIFSRDIEFVEAVAVH 62

Query: 173 DGLSFAAEMDFFPVMFETNSKRVCELMRGKREELSDLKCVVADALETWLSS-WPLQFVFS 232
           +GL    ++   P + E++S  V  L+  K     ++  +++D  E   SS    Q  F+
Sbjct: 63  NGLQLVMDIGLAPAIIESDSFNVVNLINNKIHSRCEVGWLISDVQEVLSSSESSFQVKFA 122

Query: 233 FREGNRLAHHLARLALRDQLDFVWFEEV 260
            R  N +AHHL++LAL + ++ VW EEV
Sbjct: 123 PRSCNEVAHHLSKLALCNSMEKVWLEEV 150

BLAST of Lcy11g015500 vs. NCBI nr
Match: TXG57364.1 (hypothetical protein EZV62_018677 [Acer yangbiense])

HSP 1 Score: 98.6 bits (244), Expect = 8.9e-17
Identity = 58/189 (30.69%), Postives = 93/189 (49.21%), Query Frame = 0

Query: 83  WSVRLLDSYRRANAQSTIGVRGGAGRDAV---KWVVPPEGWYKLNVDAAFNGKKWIVGVG 142
           W+ + +D ++ AN + T    G   R+ +   KW  PP G +KLN DAA    +  VG G
Sbjct: 110 WATKFVDKFQAANNKGT----GSQRREQIERPKWQCPPSGMFKLNTDAALLATQMKVGFG 169

Query: 143 LCMRNSGGEAMASAVRLHEFVRDSDFAEGWAMGDGLSFAAEMDFFPVMFETNSKRVCELM 202
           + +R+  G  M S+++          AE  A+  G++FA E  F P++ E+++K V E++
Sbjct: 170 IIIRDDTGAVMGSSIQPALATVTPQAAEAMAIYRGITFAVETGFLPLVVESDAKGVVEMI 229

Query: 203 RGKREELSDLKCVVADALETWLSSW-PLQFVFSFREGNRLAHHLARLALRDQLDFVWFEE 262
                  ++   V+AD L    SS  P+   FS R  N +AH LA LA R    + W   
Sbjct: 230 NKGVPSDAEYGVVIADILSLINSSLVPISVTFSSRNSNGVAHELANLAARATCSYFWMYS 289

Query: 263 VSSCAENIL 268
                E+++
Sbjct: 290 CPPQVESLV 294

BLAST of Lcy11g015500 vs. NCBI nr
Match: KAA3487801.1 (reverse transcriptase [Gossypium australe])

HSP 1 Score: 98.6 bits (244), Expect = 8.9e-17
Identity = 61/205 (29.76%), Postives = 95/205 (46.34%), Query Frame = 0

Query: 62  NLFLVLRDAMDNLDWNGELPAWSVR--------LLDSYRRANAQSTIGVRGGAGRDAVKW 121
           N+ L+ + +   L+  G L A  +R         L++   AN      ++    RD  KW
Sbjct: 206 NIALLAKQSWRLLENPGLLTAQLIRAKYCNGSNFLEASLGANPSLVCALKHPRPRDLNKW 265

Query: 122 VVPPEGWYKLNVDAAFNGKKWIVGVGLCMRNSGGEAMASAVRLHEFVRDSDFAEGWAMGD 181
            +PP  W K+NVD  F+  +     G  +RN     M S  R H  VR    AE   +  
Sbjct: 266 GLPPPNWVKINVDTGFSAARQHAASGFIIRNDEWLIMGSGFRTHNLVRSVVLAEATVVLH 325

Query: 182 GLSFAAEMDFFPVMFETNSKRVCELMRGKREELSDLKCVVADALETWLSSWPLQFVFSFR 241
           GL FA EM F  V+ E++ K V + ++  +E+ S+++ +  DA     +    +F F  R
Sbjct: 326 GLHFAPEMGFSNVILESDPKLVIQNLQSSKEDYSEIRPLTWDAKALTRNFSSCRFEFVAR 385

Query: 242 EGNRLAHHLARLALRDQLDFVWFEE 259
           +GN  AH +A   L+   DF W E+
Sbjct: 386 DGNSAAHAMAVEGLKRYEDFFWVED 410

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1CIF11.6e-1933.68uncharacterized protein LOC111011237 OS=Momordica charantia OX=3673 GN=LOC111011... [more]
V4UMR38.7e-1835.81RNase H domain-containing protein (Fragment) OS=Citrus clementina OX=85681 GN=CI... [more]
A0A5C7HKD54.3e-1730.69Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_018677 PE=4 SV=1[more]
A0A5B6X0L34.3e-1729.76Reverse transcriptase OS=Gossypium australe OX=47621 GN=EPI10_031605 PE=4 SV=1[more]
A0A2I4ENH22.1e-1630.58uncharacterized protein LOC108991215 OS=Juglans regia OX=51240 GN=LOC108991215 P... [more]
Match NameE-valueIdentityDescription
XP_022140628.13.3e-1933.68uncharacterized protein LOC111011237 [Momordica charantia][more]
XP_024046691.11.4e-1732.39uncharacterized protein LOC112101027 [Citrus clementina][more]
ESR40694.11.8e-1735.81hypothetical protein CICLE_v10027161mg, partial [Citrus clementina][more]
TXG57364.18.9e-1730.69hypothetical protein EZV62_018677 [Acer yangbiense][more]
KAA3487801.18.9e-1729.76reverse transcriptase [Gossypium australe][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 120..249
e-value: 1.1E-10
score: 43.7
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 124..246
e-value: 1.2E-14
score: 54.2
NoneNo IPR availablePANTHERPTHR33033POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 108..271
NoneNo IPR availablePANTHERPTHR33033:SF67SUBFAMILY NOT NAMEDcoord: 108..271
IPR044730Ribonuclease H-like domain, plant typeCDDcd06222RNase_H_likecoord: 123..244
e-value: 1.2148E-9
score: 53.0868
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 119..254

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy11g015500.1Lcy11g015500.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity