Lcy11g015470 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g015470
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Reverse transcriptase domain-containing protein
Location	Chr11: 36598109 .. 36601606 (-)
RNA-Seq Expression	Lcy11g015470
Synteny	Lcy11g015470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATCTACTTAGATTTGAAGAAGGGTGGCTGAAATTCAAAGAAACGAAAGAGATTATTAAAGATAGCTGGAGAACAGAAGAAGGAGTTGGGGCTCATAAAATCAACCTTAGGCTCGGAAAATGTATCCAGAACCTCCATAGATGGAGTAAAAAGAGGTTGAAAGGGAGTATTAGTGCGGCGGTCAACAGGAAAGAAGAAGAAGTTCAGTATCTAAGCTCGAGGGAAGACAGTCTTATAGAAGGAGAGGTTGAAAGAGCTGAAGCAGAGCTAGAATCTCTCCTTGAAGAAGAAGAATTTTATTGGAGAAGCAGATCAAGAGAAGTGTGGTTGAAGAGCGGAGATAAGAATACCAAATGGTTTCACACCAAAGCTAATCAGAGAAGGAAAATAAATAAGATAGATGGAGTTGTGGACCACAAAGGAGATTGGGTATCGGAAGAAAGACAGATTGGAATGGTGGCTTCAGATTATTTTAGGGAGCTGTTTAGGACTTCAAGCCCTGATCAAGATGAGATTCATGATGTTATCAGATGTGTAGAAAATAAAATATCGGAAGAGGACAAGATCCTTCTTGATCAACCATACAGTAGGAAGGAAGTAGAGGATGCCATGAAAAGCCTAAGTCCGAGTAAGGCGCCCGGGTGTGATGGGATCCATGCTTCTTTTTTCCAATCGTATTGGGAGGTTGTGGGAGAGGATATAGTTCAGGTGTGCTTACAAATTCTGAACAGTGGTGCAGATATAACCCCTTTCAATAGAACCTTAATTACGCTGATACCAAAAGGAAAAGATCCAAAGTCTATGAAGGACTACAGACCGATTAGCCTATGCAATAACACTTACAAGATCATCGCGAAAACTATTGCTAATCGTCTTAAAAAAGTCCTCGATTCCATTATCTCCCCTACACAGGCAGCTTTTGTGCCAGGCAGACTCATCTCCGATAATGTGTTGGTGGGGTTTGAATGTATCCACGCCATTAACAGCCGAAAGAAGGGTAAAGAAGGCCAAATAGCAATCAAATTAGACATGAGTAAAGCCTACGATAGGGTGGAATGGAGCTATATTGAAGGAATACTAGGAAGATTGGGTTTTAGTGAAAAATGGTCAAAAATGATGATGAACTGTGTGCAAACAGTCTCCTTTTTGGTTCTTATCAACGGGAAGCCTCAAGAATAGTTCAAGCCAAGCAGAGGACTCCGGCAAGGAGATCCTTTATCGCCATATATCTTCCTCATCTGTGCAGAAGGGTTCTCGGGACTCCTGAACAGGGAAGTTGTCTCCTCTAAACTAAGAGGATTTCACATAAATAATTTTTGTCCCCCCATAACCCACCTATTCTTTGCTGATGATAGTCTTCTTTTTTGTAGGGCAACAAAGGATGAATGTCTAGCAATCAAGGATACTTTCAAGGCTTATGAGCGCGCTTCTGGGCAAGTAATAAATCTGGAGAAATCCAGTTTTATGGTGAGCAAGAATGTGGGCAAGAGGGAGGGACAGGAGCTAGGAGAAATTCTGGGAGTCAAACAGACAAAAGATCTTGGTACATACCTTGGGATGCCTTCAATGACGATCAAGAACAAAAAGTTTATGTTCAACAAGATTAAGGAAAAGGTAGAAAATCGGCTGCAAGGATGGAAGGAGAGACTTTTTTCTGCTGGAGGAAAAGAGGTGCTCATAAAAGCTATAATCCAGGCTATTCCCACCTACACGATGAGCTGCTTCAAGCTCCCCCTAAGCGTGTGCAAGGAAATAAACATGTTGTGTGCAAAGTTCTGGTGGGGTTCACTAGGTGACAAGAAGAAAATTCACTGGGCGAAATGGAAATCACTGTGCAAGGCTAAAGACTTTGGGGGGATGGGATTTTGAGATATCCACTTGTTTAACCAAGCAATGTTGGCTAAACAATCGTGGAGACTACTGAGATCACCAGAAAGTCTATTATTCAAAATTCTTAGGGGGAGATACTTTAGAGATGGAGATTATCTTAGGGCTCAAGTGGGTGGCAATGCATCCCAAACGTGGAAAAGCATTGTTTGGGGAAGAGATCTATTTGCGGAGGGATATAGGTGGCGTATAGGTAATGGGCGACACGTTTACATAGAGCAAGACCCTTGGCTCATAAGGAAAGGATCAAAAAGCCCATTAATTGTTCCTGAAGCATTAAAATGGGCAAAGGTGGGAGAGTTAATCACAGAGGAGAGGGAGTGGAATGAATCCCTCATTCGTGGGAACTTCATTCCTATAGATGCCGAGGATATTCTCTCAATCCCTCTAGGAAGGGATGGTAGCAAAGATGAGATTATATGGGATGTGGAGAAAAAAGGAGTTTTCTCGGTAAAGAGCGCATATCACCTAGCTGTTAACAGAGAGAAATCTTTGGAGGCCTCGAGTTCCAGCCAAGAAGAACATATAGCTATGTGGAGGAGTGTGTGGAATTTGAATATCCTTCCCAGGACAAAAATTGGCCTATGGAAGATCCTAAAAAACTACATCCCATCCAAACCAAACCTGTTATACAGAGGCATTGATGTTAATCCTATATGCTCCATGTGCAGGTCGAAAAGGGAAAGTGCAACACACACACTATGGAAATGCAAGGCCGTCAGGTATGTATGGCATAATTTTTTCCCTAATCTAATTGATTTTTTTTCTTACTGCAGAGAAAATGGGGATGTGGGAGAAATCTGGAATGGATTGGCGGATCAGCTAAACAAAGAAGATCTGGAAAAAGCGGCTGTAATTCTATGGTCTACTTGGAATTTTAGGAATAAAGCTACGATGGGATCAAGCAGATCAACAGTGCAAGAACTCTCCAGACAAATCAGAAGGAATTTGGAGGAGCAAAGGAAAGGCAGAAAAGACAATCAATGGATGCTATCCTCGGAGAACCAGGGGAATCAGGAAGTATGGACTCCCCCACCGGCTGGTCTGCTCAAAATTAATGTGGATGCCTCATGGAACAATGATCAGAGGAGAGGTGGTGTGGGTTGGATAATCCGTGATTCTCAAGGATCTTCTGTAGGAATGGGCAGTGCAAAGATTAAGAGAGGATGGTCAATCCGGACGATGGAGGCAGTGGCTGTCAAGGAGGGATTAAAAGCTTACCTGGCAGCAAAAGGAGAATCTCAATCCCGAATCCTCATTGAATCGGATTCGATTGAGGTCGTTAGAGCTCTGAACCACGAGATTGAAGATGCTTCAGAAACGAGGGTGATCTTGGACGAAATCCATCAATTATCGTCCCTGGCCGGTGAAGTCTCGTTTGTGAAGTGCCCTCGAGTGGTCAACGGAATCGCGCACCTGATCGCGCGTTCGACGGCTGGATTTTGGCCGAAGTCAGGCATATCTTCCGTAGTTGAAGATGGCAGTTTTGGGCAATTTATTTCTTCCACGCTGGAAGATAAATGGAGTTGTTGGGGAGGGAACTTCCCGCTTTTTGTATCCCATTTATTGTGGAGAGAATCTGGTGTATTAAACGTTTCTGGTAGTTAA

mRNA sequence

ATGCATCTACTTAGATTTGAAGAAGGGTGGCTGAAATTCAAAGAAACGAAAGAGATTATTAAAGATAGCTGGAGAACAGAAGAAGGAGTTGGGGCTCATAAAATCAACCTTAGGCTCGGAAAATGTATCCAGAACCTCCATAGATGGAGTAAAAAGAGGTTGAAAGGGAGTATTAGTGCGGCGGTCAACAGGAAAGAAGAAGAAGTTCAGTATCTAAGCTCGAGGGAAGACAGTCTTATAGAAGGAGAGGTTGAAAGAGCTGAAGCAGAGCTAGAATCTCTCCTTGAAGAAGAAGAATTTTATTGGAGAAGCAGATCAAGAGAAGTGTGGTTGAAGAGCGGAGATAAGAATACCAAATGGTTTCACACCAAAGCTAATCAGAGAAGGAAAATAAATAAGATAGATGGAGTTGTGGACCACAAAGGAGATTGGGTATCGGAAGAAAGACAGATTGGAATGGTGGCTTCAGATTATTTTAGGGAGCTGTTTAGGACTTCAAGCCCTGATCAAGATGAGATTCATGATGTTATCAGATGTGTAGAAAATAAAATATCGGAAGAGGACAAGATCCTTCTTGATCAACCATACAGTAGGAAGGAAGTAGAGGATGCCATGAAAAGCCTAAGTCCGAGTAAGGCGCCCGGGTGTGATGGGATCCATGCTTCTTTTTTCCAATCGTATTGGGAGGTTGTGGGAGAGGATATAGTTCAGGTGGGAGAGTTAATCACAGAGGAGAGGGAGTGGAATGAATCCCTCATTCGTGGGAACTTCATTCCTATAGATGCCGAGGATATTCTCTCAATCCCTCTAGGAAGGGATGGTAGCAAAGATGAGATTATATGGGATGTGGAGAAAAAAGGAGTTTTCTCGGTAAAGAGCGCATATCACCTAGCTGTTAACAGAGAGAAATCTTTGGAGGCCTCGAGTTCCAGCCAAGAAGAACATATAGCTATATCAACAGTGCAAGAACTCTCCAGACAAATCAGAAGGAATTTGGAGGAGCAAAGGAAAGGCAGAAAAGACAATCAATGGATGCTATCCTCGGAGAACCAGGGGAATCAGGAAGTATGGACTCCCCCACCGGCTGGTCTGCTCAAAATTAATGTGGATGCCTCATGGAACAATGATCAGAGGAGAGGTGGTGTGGGTTGGATAATCCGTGATTCTCAAGGATCTTCTGTAGGAATGGGCAGTGCAAAGATTAAGAGAGGATGGTCAATCCGGACGATGGAGGCAGTGGCTGTCAAGGAGGGATTAAAAGCTTACCTGGCAGCAAAAGGAGAATCTCAATCCCGAATCCTCATTGAATCGGATTCGATTGAGGTCGTTAGAGCTCTGAACCACGAGATTGAAGATGCTTCAGAAACGAGGGTGATCTTGGACGAAATCCATCAATTATCGTCCCTGGCCGGTGAAGTCTCGTTTGTGAAGTGCCCTCGAGTGGTCAACGGAATCGCGCACCTGATCGCGCGTTCGACGGCTGGATTTTGGCCGAAGTCAGGCATATCTTCCGTAGTTGAAGATGGCAGTTTTGGGCAATTTATTTCTTCCACGCTGGAAGATAAATGGAGTTGTTGGGGAGGGAACTTCCCGCTTTTTGTATCCCATTTATTGTGGAGAGAATCTGGTGTATTAAACGTTTCTGGTAGTTAA

Coding sequence (CDS)

ATGCATCTACTTAGATTTGAAGAAGGGTGGCTGAAATTCAAAGAAACGAAAGAGATTATTAAAGATAGCTGGAGAACAGAAGAAGGAGTTGGGGCTCATAAAATCAACCTTAGGCTCGGAAAATGTATCCAGAACCTCCATAGATGGAGTAAAAAGAGGTTGAAAGGGAGTATTAGTGCGGCGGTCAACAGGAAAGAAGAAGAAGTTCAGTATCTAAGCTCGAGGGAAGACAGTCTTATAGAAGGAGAGGTTGAAAGAGCTGAAGCAGAGCTAGAATCTCTCCTTGAAGAAGAAGAATTTTATTGGAGAAGCAGATCAAGAGAAGTGTGGTTGAAGAGCGGAGATAAGAATACCAAATGGTTTCACACCAAAGCTAATCAGAGAAGGAAAATAAATAAGATAGATGGAGTTGTGGACCACAAAGGAGATTGGGTATCGGAAGAAAGACAGATTGGAATGGTGGCTTCAGATTATTTTAGGGAGCTGTTTAGGACTTCAAGCCCTGATCAAGATGAGATTCATGATGTTATCAGATGTGTAGAAAATAAAATATCGGAAGAGGACAAGATCCTTCTTGATCAACCATACAGTAGGAAGGAAGTAGAGGATGCCATGAAAAGCCTAAGTCCGAGTAAGGCGCCCGGGTGTGATGGGATCCATGCTTCTTTTTTCCAATCGTATTGGGAGGTTGTGGGAGAGGATATAGTTCAGGTGGGAGAGTTAATCACAGAGGAGAGGGAGTGGAATGAATCCCTCATTCGTGGGAACTTCATTCCTATAGATGCCGAGGATATTCTCTCAATCCCTCTAGGAAGGGATGGTAGCAAAGATGAGATTATATGGGATGTGGAGAAAAAAGGAGTTTTCTCGGTAAAGAGCGCATATCACCTAGCTGTTAACAGAGAGAAATCTTTGGAGGCCTCGAGTTCCAGCCAAGAAGAACATATAGCTATATCAACAGTGCAAGAACTCTCCAGACAAATCAGAAGGAATTTGGAGGAGCAAAGGAAAGGCAGAAAAGACAATCAATGGATGCTATCCTCGGAGAACCAGGGGAATCAGGAAGTATGGACTCCCCCACCGGCTGGTCTGCTCAAAATTAATGTGGATGCCTCATGGAACAATGATCAGAGGAGAGGTGGTGTGGGTTGGATAATCCGTGATTCTCAAGGATCTTCTGTAGGAATGGGCAGTGCAAAGATTAAGAGAGGATGGTCAATCCGGACGATGGAGGCAGTGGCTGTCAAGGAGGGATTAAAAGCTTACCTGGCAGCAAAAGGAGAATCTCAATCCCGAATCCTCATTGAATCGGATTCGATTGAGGTCGTTAGAGCTCTGAACCACGAGATTGAAGATGCTTCAGAAACGAGGGTGATCTTGGACGAAATCCATCAATTATCGTCCCTGGCCGGTGAAGTCTCGTTTGTGAAGTGCCCTCGAGTGGTCAACGGAATCGCGCACCTGATCGCGCGTTCGACGGCTGGATTTTGGCCGAAGTCAGGCATATCTTCCGTAGTTGAAGATGGCAGTTTTGGGCAATTTATTTCTTCCACGCTGGAAGATAAATGGAGTTGTTGGGGAGGGAACTTCCCGCTTTTTGTATCCCATTTATTGTGGAGAGAATCTGGTGTATTAAACGTTTCTGGTAGTTAA

Protein sequence

MHLLRFEEGWLKFKETKEIIKDSWRTEEGVGAHKINLRLGKCIQNLHRWSKKRLKGSISAAVNRKEEEVQYLSSREDSLIEGEVERAEAELESLLEEEEFYWRSRSREVWLKSGDKNTKWFHTKANQRRKINKIDGVVDHKGDWVSEERQIGMVASDYFRELFRTSSPDQDEIHDVIRCVENKISEEDKILLDQPYSRKEVEDAMKSLSPSKAPGCDGIHASFFQSYWEVVGEDIVQVGELITEEREWNESLIRGNFIPIDAEDILSIPLGRDGSKDEIIWDVEKKGVFSVKSAYHLAVNREKSLEASSSSQEEHIAISTVQELSRQIRRNLEEQRKGRKDNQWMLSSENQGNQEVWTPPPAGLLKINVDASWNNDQRRGGVGWIIRDSQGSSVGMGSAKIKRGWSIRTMEAVAVKEGLKAYLAAKGESQSRILIESDSIEVVRALNHEIEDASETRVILDEIHQLSSLAGEVSFVKCPRVVNGIAHLIARSTAGFWPKSGISSVVEDGSFGQFISSTLEDKWSCWGGNFPLFVSHLLWRESGVLNVSGS

Homology

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BLAST of Lcy11g015470 vs. ExPASy Swiss-Prot
Match: P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 3.0e-06
Identity = 63/238 (26.47%), Postives = 110/238 (46.22%), Query Frame = 0


Query: 9   GWLKFKETKEIIKDSWRTEEGVGAHKINLRLGKCIQNLHRWSKKRLKGSISAAVNRKEEE 68
           GW  F++    +   W     VG  K++L+L      L +   K + G  +A +     E
Sbjct: 271 GWRAFQDEFATLNQWW----DVG--KVHLKL------LCQEYTKSVSGQRNAEIEALNGE 330

Query: 69  V----QYLSSREDSLIEGE-VERAEAELESLLEEEEFYWRSRSREVWLKSGDKNTKWFHT 128
           V    Q LS  ED  ++ E +ER EA L ++ + +      RSR   L   D+ +++F+ 
Sbjct: 331 VLDLEQRLSGSEDQALQCEYLERKEA-LRNMEQRQARGAFVRSRMQLLCDMDRGSRFFYA 390

Query: 129 KANQRRKINKIDGVVDHKGDWVSEERQIGMVASDYFRELFRTS--SPDQ-DEIHDVIRCV 188
              ++    +I  +    G  + +   I   A  +++ LF     SPD  +E+ D +  V
Sbjct: 391 LEKKKGNRKQITCLFAEDGTPLEDPEAIRDRARSFYQNLFSPDPISPDACEELWDGLPVV 450

Query: 189 ENKISEEDKILLDQPYSRKEVEDAMKSLSPSKAPGCDGIHASFFQSYWEVVGEDIVQV 239
               SE  K  L+ P +  E+  A++ +  +K+PG DG+   FFQ +W+ +G D  +V
Sbjct: 451 ----SERRKERLETPITLDELSQALRLMPHNKSPGLDGLTIEFFQFFWDTLGPDFHRV 491

[Close]

BLAST of Lcy11g015470 vs. ExPASy Swiss-Prot
Match: P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2)

HSP 1 Score: 49.7 bits (117), Expect = 1.2e-04
Identity = 57/212 (26.89%), Postives = 94/212 (44.34%), Query Frame = 0


Query: 45  NLHRWSKKRLKGS-ISAAVNRKEEEVQYLSSREDSLIEGEVERAEAELESLLEEEEFYWR 104
           NL    K  L+G  I+ + ++K+ E  + SS    L    +E+ EA             R
Sbjct: 293 NLWDTMKAFLRGKLIALSASKKKRETAHTSSLTTHL--KALEKKEANSPK---------R 352

Query: 105 SRSREVWLKSGDKN---TKWFHTKANQRR-----KINKID-----------------GVV 164
           SR +E+    G+ N   T+    + NQ R     KINKID                  + 
Sbjct: 353 SRRQEIIKLRGEINQVETRRTIQRINQTRSWFFEKINKIDKPLARLTKGHRDKILINKIR 412

Query: 165 DHKGDWVSEERQIGMVASDYFRELFRTSSPDQDEIHDVI-RCVENKISEEDKILLDQPYS 224
           + KGD  ++  +I      +++ L+ T   + DE+   + R    K++++    L+ P S
Sbjct: 413 NEKGDITTDPEEIQNTIRSFYKRLYSTKLENLDEMDKFLDRYQVPKLNQDQVDHLNSPIS 472

Query: 225 RKEVEDAMKSLSPSKAPGCDGIHASFFQSYWE 230
            KE+E  + SL   K+PG DG  A F+Q++ E
Sbjct: 473 PKEIEAVINSLPTKKSPGPDGFSAEFYQTFKE 493

[Close]

BLAST of Lcy11g015470 vs. ExPASy TrEMBL
Match: A0A2N9GPZ7 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS29430 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 6.8e-38
Identity = 85/237 (35.86%), Postives = 145/237 (61.18%), Query Frame = 0


Query: 3   LLRFEEGWLKFKETKEIIKDSW--RTEEGVGAHKINLRLGKCIQNLHRWSKKRLKGSISA 62
           L RFE  W+K ++ +E+I  +W     EG     +  ++  C  +L  WS++R  GS+++
Sbjct: 109 LFRFEAMWIKDEQCREVIDHAWGDGVTEGSPMFMVVEKMKLCRTSLIGWSRERF-GSLAS 168

Query: 63  AVNRKEEEVQYLSSREDSLIEGEVERAEAELESLLEEEEFYWRSRSREVWLKSGDKNTKW 122
           ++ RK E++Q+L +   S     +   + +L  LLE+EE +WR RSR  W+  GDKNTK+
Sbjct: 169 SIKRKREQLQHLINETPSGFSTGILELQDDLNGLLEKEEIFWRQRSRVAWMSEGDKNTKF 228

Query: 123 FHTKANQRRKINKIDGVVDHKGDWVSEERQIGMVASDYFRELFRTSSPDQDEIHDVIRCV 182
           FH + N+RR+ N I G+ D  G W +E+ +I  +A DYF+ +F +S+P  + I  V++ +
Sbjct: 229 FHAQCNERRRTNHISGLRDRDGVWQTEKTKIAEIAVDYFQGIFTSSNPSAESITTVLQGM 288

Query: 183 ENKISEEDKILLDQPYSRKEVEDAMKSLSPSKAPGCDGIHASFFQSYWEVVGEDIVQ 238
           E+ ++      L   +++ EV  A+K + P+KAPG DG+ A F+Q+YW++VG ++ Q
Sbjct: 289 ESVVTNAMNDQLQAEFTKDEVSLALKQMYPTKAPGPDGMSAIFYQTYWDIVGPEVTQ 344

[Close]

BLAST of Lcy11g015470 vs. ExPASy TrEMBL
Match: A0A2N9IPS8 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55418 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 6.8e-38
Identity = 85/237 (35.86%), Postives = 145/237 (61.18%), Query Frame = 0


Query: 3   LLRFEEGWLKFKETKEIIKDSW--RTEEGVGAHKINLRLGKCIQNLHRWSKKRLKGSISA 62
           L RFE  W+K ++ +E+I  +W     EG     +  ++  C  +L  WS++R  GS+++
Sbjct: 684 LFRFEAMWIKDEQCREVIDHAWGDGVTEGSPMFMVVEKMKLCRTSLIGWSRERF-GSLAS 743

Query: 63  AVNRKEEEVQYLSSREDSLIEGEVERAEAELESLLEEEEFYWRSRSREVWLKSGDKNTKW 122
           ++ RK E++Q+L +   S     +   + +L  LLE+EE +WR RSR  W+  GDKNTK+
Sbjct: 744 SIKRKREQLQHLINETPSGFSTGILELQDDLNGLLEKEEIFWRQRSRVAWMSEGDKNTKF 803

Query: 123 FHTKANQRRKINKIDGVVDHKGDWVSEERQIGMVASDYFRELFRTSSPDQDEIHDVIRCV 182
           FH + N+RR+ N I G+ D  G W +E+ +I  +A DYF+ +F +S+P  + I  V++ +
Sbjct: 804 FHAQCNERRRTNHISGLRDRDGVWQTEKTKIAEIAVDYFQGIFTSSNPSAESITTVLQGM 863

Query: 183 ENKISEEDKILLDQPYSRKEVEDAMKSLSPSKAPGCDGIHASFFQSYWEVVGEDIVQ 238
           E+ ++      L   +++ EV  A+K + P+KAPG DG+ A F+Q+YW++VG ++ Q
Sbjct: 864 ESVVTNAMNDQLQAEFTKDEVSLALKQMYPTKAPGPDGMSAIFYQTYWDIVGPEVTQ 919

[Close]

BLAST of Lcy11g015470 vs. ExPASy TrEMBL
Match: A0A2N9EEA9 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS967 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 3.4e-37
Identity = 83/236 (35.17%), Postives = 145/236 (61.44%), Query Frame = 0


Query: 3   LLRFEEGWLKFKETKEIIKDSWR--TEEGVGAHKINLRLGKCIQNLHRWSKKRLKGSISA 62
           + RFE  W+K +++K++++ +W   T EG    ++  +L  C  +L  WSK+R  G +++
Sbjct: 709 VFRFEAMWVKDEQSKDVVQQAWSLDTAEGSPMFQVFEKLKHCRVSLIAWSKERF-GKLAS 768

Query: 63  AVNRKEEEVQYLSSREDSLIEGEVERAEAELESLLEEEEFYWRSRSREVWLKSGDKNTKW 122
            +  K + +Q LS+     +  E+   + E+  LLE+EE +WR RSR  W++ GD+NT++
Sbjct: 769 RIKEKRKRLQELSNVNPIDLSAEILALQDEINDLLEKEEIFWRQRSRVAWMQDGDQNTRF 828

Query: 123 FHTKANQRRKINKIDGVVDHKGDWVSEERQIGMVASDYFRELFRTSSPDQDEIHDVIRCV 182
           FH + NQRRK N I G++D  G W +++ ++  +A +YFR +F +S P    I   +  V
Sbjct: 829 FHAQCNQRRKTNFISGLLDSDGCWQTDQMKVADLAVEYFRNIFTSSQPQSAVIDSCLWGV 888

Query: 183 ENKISEEDKILLDQPYSRKEVEDAMKSLSPSKAPGCDGIHASFFQSYWEVVGEDIV 237
           E  ++++    L Q +S +EV  A+  + P+KAPG DG+ A F+Q+YWE+VG +++
Sbjct: 889 ERVVTQDMNDALLQEFSEEEVRQALWQMYPTKAPGPDGMSAIFYQTYWEIVGPEVL 943

[Close]

BLAST of Lcy11g015470 vs. ExPASy TrEMBL
Match: A0A2N9EEA9 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS967 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 9.9e-05
Identity = 31/71 (43.66%), Postives = 41/71 (57.75%), Query Frame = 0


Query: 241  LITEEREWNESLIRGNFIPIDAEDILSIPLGRDGSKDEIIWDVEKKGVFSVKSAYHLAVN 300
            L+ E R WNE+LIR NF   +A  I+SI L  +   D + W+  K GVFSV+SAYHL + 
Sbjct: 1360 LLEEPRRWNENLIRENFSEWEAGVIMSIQLRDNRRGDRLFWNETKTGVFSVRSAYHLQLR 1419

Query: 301  REKSLEASSSS 312
                +    SS
Sbjct: 1420 HAAEVCGGESS 1430

HSP 2 Score: 166.4 bits (420), Expect = 3.4e-37
Identity = 83/236 (35.17%), Postives = 145/236 (61.44%), Query Frame = 0


Query: 3   LLRFEEGWLKFKETKEIIKDSWR--TEEGVGAHKINLRLGKCIQNLHRWSKKRLKGSISA 62
           + RFE  W+K +++K++++ +W   T EG    ++  +L  C  +L  WSK+R  G +++
Sbjct: 709 VFRFEAMWVKDEQSKDVVQQAWSLDTAEGSPMFQVFEKLKHCRVSLIAWSKERF-GKLAS 768

Query: 63  AVNRKEEEVQYLSSREDSLIEGEVERAEAELESLLEEEEFYWRSRSREVWLKSGDKNTKW 122
            +  K + +Q LS+     +  E+   + E+  LLE+EE +WR RSR  W++ GD+NT++
Sbjct: 769 RIKEKRKRLQELSNVNPIDLSAEILALQDEINDLLEKEEIFWRQRSRVAWMQDGDQNTRF 828

Query: 123 FHTKANQRRKINKIDGVVDHKGDWVSEERQIGMVASDYFRELFRTSSPDQDEIHDVIRCV 182
           FH + NQRRK N I G++D  G W +++ ++  +A +YFR +F +S P    I   +  V
Sbjct: 829 FHAQCNQRRKTNFISGLLDSDGCWQTDQMKVADLAVEYFRNIFTSSQPQSAVIDSCLWGV 888

Query: 183 ENKISEEDKILLDQPYSRKEVEDAMKSLSPSKAPGCDGIHASFFQSYWEVVGEDIV 237
           E  ++++    L Q +S +EV  A+  + P+KAPG DG+ A F+Q+YWE+VG +++
Sbjct: 889 ERVVTQDMNDALLQEFSEEEVRQALWQMYPTKAPGPDGMSAIFYQTYWEIVGPEVL 943

[Close]

BLAST of Lcy11g015470 vs. ExPASy TrEMBL
Match: A0A2N9HND5 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS41125 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 9.9e-05
Identity = 31/71 (43.66%), Postives = 41/71 (57.75%), Query Frame = 0


Query: 241  LITEEREWNESLIRGNFIPIDAEDILSIPLGRDGSKDEIIWDVEKKGVFSVKSAYHLAVN 300
            L+ E R WNE+LIR NF   +A  I+SI L  +   D + W+  K GVFSV+SAYHL + 
Sbjct: 1360 LLEEPRRWNENLIRENFSEWEAGVIMSIQLRDNRRGDRLFWNETKTGVFSVRSAYHLQLR 1419

Query: 301  REKSLEASSSS 312
                +    SS
Sbjct: 1420 HAAEVCGGESS 1430

HSP 2 Score: 165.6 bits (418), Expect = 5.8e-37
Identity = 135/509 (26.52%), Postives = 231/509 (45.38%), Query Frame = 0


Query: 5   RFEEGWLKFKETKEIIKDSWRTEEGVGAHKINLRLGKCIQNLHRWSKKRLKGSISAAVNR 64
           +FE  WLK ++  E++++ W  E   G  ++  R+  C + L RW +++ +      +  
Sbjct: 86  KFENLWLKEEDVDEVVEEGWCRE---GNIEVTERVEACAEELQRWGRRK-RTRFKEEIET 145

Query: 65  KEEEVQYLSSREDSLIEGEVERAEAELESLLEEEEFYWRSRSREVWLKSGDKNTKWFHTK 124
             E+++ L  R D       +  +     LL ++E YWR R++  WLK GD NTK+FH  
Sbjct: 146 CCEDMEKLRGRTDQRSVVRYQEVQNNHARLLVQKEAYWRQRAKMHWLKEGDLNTKFFHMS 205

Query: 125 ANQRRKINKIDGVVDHKGDWVSEERQIGMVASDYFRELFRTSSPDQDEIHDVIRCVENKI 184
           AN R K+ K+  +V+     V+ +  +  VA  YF  LF+    +Q+    V+  ++ ++
Sbjct: 206 ANARCKVKKVVKLVNDDDVVVTNQEGLCEVAKSYFESLFKAVEGNQE---PVLSLIQPRV 265

Query: 185 SEEDKILLDQPYSRKEVEDAMKSLSPSKAPGCDGIHASFFQSYWEVVGEDIVQVGELITE 244
           ++ D   L  P  ++E+  A+  + P K+PG DG + +F+Q +W++ G+DI         
Sbjct: 266 TDIDNERLTAPILKEEIHTALMQMHPDKSPGPDGFNPAFYQHFWQLCGDDIYD------P 325

Query: 245 EREWNESLIRGNFIPIDAEDILSIPLGRDGSKDEIIWDVEKKGVFSVKSAY--------- 304
            + W +           AE IL  PL  +  +D+++W  E  G+++VKS Y         
Sbjct: 326 VKSWLDR-------EAVAERILQTPLFEEVKEDQLVWQFENHGMYTVKSGYKNHIKSKAA 385

Query: 305 -----------------------HLAVNREKSLEASSSSQEEHIAISTVQELSRQIRRNL 364
                                  HL     ++L  +S S+E +    TV  ++R I  N 
Sbjct: 386 DSNNNMDGGWGALWRSSAPPKTKHLLWRVCRTLTLASVSKETNEIAGTVAAIARCIWHNR 445

Query: 365 EEQR-KGRKDN-------------QWMLSSENQGNQE-VWTPPPAGLLKINVDASWNNDQ 424
                 G KD+             +W   + +Q  Q  + T P  G LK NVDAS++   
Sbjct: 446 NNWLWNGTKDSAKGVALMAAHMIGEWRAVNMHQQQQHLITTCPRDGWLKCNVDASFSQAS 505

Query: 425 RRGGVGWIIRDSQGSSVGMGSAKIKRGWSIRTMEAVAVKEGLKAYLAAKGESQSRILIES 467
              G GW +R+S G  V  G+       +I   EA+A+ E ++  ++ +      I+ ES
Sbjct: 506 GHTGWGWCLRNSNGVFVAAGTNMSTHKLTIVEGEAMAILEAMREAISRR---WFNIVFES 565

[Close]

BLAST of Lcy11g015470 vs. NCBI nr
Match: KAF7844569.1 (protein BPS1, chloroplastic-like [Senna tora])

HSP 1 Score: 185.3 bits (469), Expect = 1.4e-42
Identity = 112/312 (35.90%), Postives = 173/312 (55.45%), Query Frame = 0


Query: 5   RFEEGWLKFKETKEIIKDSWRTEEGVGAHKINLRLGKCIQNLHRWSKKRLKGSISAAVNR 64
           RFEE W +     +I+   W     V   KIN      +  L + +K    GSI   +  
Sbjct: 42  RFEEFWCREHNCSDIVALGWDAGNTV-VDKIN-----NVTALLKEAKFHTTGSIRKKIKH 101

Query: 65  KEEEVQYLSSRE-DSLIEGEVERAEAELESLLEEEEFYWRSRSREVWLKSGDKNTKWFHT 124
            EE +  L + +    ++  ++  + EL+ L + EE  WR RSR VWLK GD NTK+FH 
Sbjct: 102 LEESLDILKNLDLTDAVKKNIQTTQLELDQLRKNEEILWRQRSRAVWLKEGDLNTKFFHR 161

Query: 125 KANQRRKINKIDGVVDHKGDWVSEERQIGMVASDYFRELFRTSSPDQDEIHDVIRCVENK 184
           KANQRR  N I  + D    + S+   +    + YF ELF+ S  + + + +V + ++ K
Sbjct: 162 KANQRRNRNTIRRIRDEHNIFHSDSNGLVNTITSYFLELFKAS--NLEGVEEVCKGIKLK 221

Query: 185 ISEEDKILLDQPYSRKEVEDAMKSLSPSKAPGCDGIHASFFQSYWEVVGEDI-VQVGELI 244
           ++EE    L +PY + EV+DA+ S+ PSKAPG DGI A FFQ +W  VG D+   V +++
Sbjct: 222 LNEEQCAFLSKPYCQIEVKDALDSMHPSKAPGPDGITALFFQKFWSTVGVDVSTTVLQIL 281

Query: 245 TEE------REWNESLIRGNFIPIDAEDILSIPLGRDGSKDEIIWDVEKKGVFSVKSAYH 304
            ++      R WN S +   F+P +A+ ILSIPL     +D ++W +EK G +SV+SAYH
Sbjct: 282 NDDLICHDSRSWNSSRVEELFLPFEAKIILSIPLSWRNVEDRLLWPLEKHGNYSVRSAYH 341

Query: 305 LAVNREKSLEAS 309
           L ++++ +  +S
Sbjct: 342 LIISQDSNTPSS 345

[Close]

BLAST of Lcy11g015470 vs. NCBI nr
Match: XP_023906330.1 (uncharacterized protein LOC112018052 [Quercus suber])

HSP 1 Score: 169.1 bits (427), Expect = 1.1e-37
Identity = 85/233 (36.48%), Postives = 142/233 (60.94%), Query Frame = 0


Query: 5   RFEEGWLKFKETKEIIKDSWRTEEGVGAHKINL--RLGKCIQNLHRWSKKRLKGSISAAV 64
           RFEE W+  +E   II+++WR    VG+    L  ++      L +W K    G+  A++
Sbjct: 351 RFEEKWVSNQECGRIIEEAWRQTVEVGSPMFCLFQKIKNTRLALLKWEKVAF-GNTKASL 410

Query: 65  NRKEEEVQYLSSREDSLIEGEVERAEAELESLLEEEEFYWRSRSREVWLKSGDKNTKWFH 124
             K  E++ L+S+ D  +   +   + E+ ++L +EE  WR RSR +WL +GDKNTK+FH
Sbjct: 411 KDKHRELEELNSKNDPALLERIRETKVEINNILHQEEVAWRQRSRAIWLPAGDKNTKFFH 470

Query: 125 TKANQRRKINKIDGVVDHKGDWVSEERQIGMVASDYFRELFRTSSPDQDEIHDVIRCVEN 184
            +A QR++ N+I GV +  G+W ++E QI  +A +YF+ LF +S P+ D++  V+  V+ 
Sbjct: 471 QRATQRKRRNQIVGVFNTVGEWCTDEDQIADIAVEYFQSLFTSSQPEDDDVSRVLEAVDR 530

Query: 185 KISEEDKILLDQPYSRKEVEDAMKSLSPSKAPGCDGIHASFFQSYWEVVGEDI 236
           ++++E    L +PY+ +E+  A+  + PSKAPG DG+   FFQ +W +VG D+
Sbjct: 531 RVTDEMNGTLLEPYTGEEIRQALFQMHPSKAPGPDGMSPFFFQKFWNIVGYDV 582

[Close]

BLAST of Lcy11g015470 vs. NCBI nr
Match: GAU44733.1 (hypothetical protein TSUD_88180 [Trifolium subterraneum])

HSP 1 Score: 165.6 bits (418), Expect = 1.2e-36
Identity = 135/509 (26.52%), Postives = 231/509 (45.38%), Query Frame = 0


Query: 5   RFEEGWLKFKETKEIIKDSWRTEEGVGAHKINLRLGKCIQNLHRWSKKRLKGSISAAVNR 64
           +FE  WLK ++  E++++ W  E   G  ++  R+  C + L RW +++ +      +  
Sbjct: 86  KFENLWLKEEDVDEVVEEGWCRE---GNIEVTERVEACAEELQRWGRRK-RTRFKEEIET 145

Query: 65  KEEEVQYLSSREDSLIEGEVERAEAELESLLEEEEFYWRSRSREVWLKSGDKNTKWFHTK 124
             E+++ L  R D       +  +     LL ++E YWR R++  WLK GD NTK+FH  
Sbjct: 146 CCEDMEKLRGRTDQRSVVRYQEVQNNHARLLVQKEAYWRQRAKMHWLKEGDLNTKFFHMS 205

Query: 125 ANQRRKINKIDGVVDHKGDWVSEERQIGMVASDYFRELFRTSSPDQDEIHDVIRCVENKI 184
           AN R K+ K+  +V+     V+ +  +  VA  YF  LF+    +Q+    V+  ++ ++
Sbjct: 206 ANARCKVKKVVKLVNDDDVVVTNQEGLCEVAKSYFESLFKAVEGNQE---PVLSLIQPRV 265

Query: 185 SEEDKILLDQPYSRKEVEDAMKSLSPSKAPGCDGIHASFFQSYWEVVGEDIVQVGELITE 244
           ++ D   L  P  ++E+  A+  + P K+PG DG + +F+Q +W++ G+DI         
Sbjct: 266 TDIDNERLTAPILKEEIHTALMQMHPDKSPGPDGFNPAFYQHFWQLCGDDIYD------P 325

Query: 245 EREWNESLIRGNFIPIDAEDILSIPLGRDGSKDEIIWDVEKKGVFSVKSAY--------- 304
            + W +           AE IL  PL  +  +D+++W  E  G+++VKS Y         
Sbjct: 326 VKSWLDR-------EAVAERILQTPLFEEVKEDQLVWQFENHGMYTVKSGYKNHIKSKAA 385

Query: 305 -----------------------HLAVNREKSLEASSSSQEEHIAISTVQELSRQIRRNL 364
                                  HL     ++L  +S S+E +    TV  ++R I  N 
Sbjct: 386 DSNNNMDGGWGALWRSSAPPKTKHLLWRVCRTLTLASVSKETNEIAGTVAAIARCIWHNR 445

Query: 365 EEQR-KGRKDN-------------QWMLSSENQGNQE-VWTPPPAGLLKINVDASWNNDQ 424
                 G KD+             +W   + +Q  Q  + T P  G LK NVDAS++   
Sbjct: 446 NNWLWNGTKDSAKGVALMAAHMIGEWRAVNMHQQQQHLITTCPRDGWLKCNVDASFSQAS 505

Query: 425 RRGGVGWIIRDSQGSSVGMGSAKIKRGWSIRTMEAVAVKEGLKAYLAAKGESQSRILIES 467
              G GW +R+S G  V  G+       +I   EA+A+ E ++  ++ +      I+ ES
Sbjct: 506 GHTGWGWCLRNSNGVFVAAGTNMSTHKLTIVEGEAMAILEAMREAISRR---WFNIVFES 565

[Close]

BLAST of Lcy11g015470 vs. NCBI nr
Match: XP_023881891.1 (uncharacterized protein LOC111994244 [Quercus suber])

HSP 1 Score: 161.4 bits (407), Expect = 2.2e-35
Identity = 91/235 (38.72%), Postives = 138/235 (58.72%), Query Frame = 0


Query: 5   RFEEGWLKFKETKEIIKDSWRTEEGVGAHK-INLRLGKCIQNLHRWSKKRLKGSISAAVN 64
           +FE  W + ++ K+II+  W +   V + + I  RL  C +NL  W+ K + G+I   + 
Sbjct: 78  QFEAMWTRREDCKDIIQGVWNSSHEVNSPRGIAARLRCCAENLSEWN-KMIFGNIPRKIQ 137

Query: 65  RKEEEVQYL--SSREDSLIEGEVERAEAELESLLEEEEFYWRSRSREVWLKSGDKNTKWF 124
            K+E +  L  S R  SL  GE+     E+  LL+ EE  W+ RSR  WL  GD+NTK+F
Sbjct: 138 EKKETLNALVHSDRNGSL-GGEINMLRKEINELLDSEEIKWQQRSRVQWLGLGDRNTKYF 197

Query: 125 HTKANQRRKINKIDGVVDHKGDWVSEERQIGMVASDYFRELFRTSSPDQDEIHDVIRCVE 184
           HTKA+ RR+ N I+G++D  G+W      I  VA  YF+ ++ +S P +  I +V+  + 
Sbjct: 198 HTKASDRRRRNTINGIMDENGNWQDSTEGIAKVAVSYFQTIYSSSVPTR--ISEVLDAIP 257

Query: 185 NKISEEDKILLDQPYSRKEVEDAMKSLSPSKAPGCDGIHASFFQSYWEVVGEDIV 237
             ++EE    L Q ++R+E+E A+  + P+KAPG DG+ A FFQ YW +VG DIV
Sbjct: 258 TTVTEEMNHSLIQEFTREEIETALNQMHPTKAPGPDGMSAIFFQKYWNIVGNDIV 308

[Close]

BLAST of Lcy11g015470 vs. NCBI nr
Match: XP_023881891.1 (uncharacterized protein LOC111994244 [Quercus suber])

HSP 1 Score: 68.6 bits (166), Expect = 2.0e-07
Identity = 36/80 (45.00%), Postives = 51/80 (63.75%), Query Frame = 0


Query: 233 EDIVQVGELITEERE-WNESLIRGNFIPIDAEDILSIPLGRDGSKDEIIWDVEKKGVFSV 292
           +D  +V  LI  ER+ W + ++R  F+P +A  ILSIPL  +  +D+IIW   +KG FSV
Sbjct: 796 DDYPRVSALIDRERKRWKDDVVRDLFLPFEARTILSIPLSHNFPEDQIIWVGNRKGEFSV 855

Query: 293 KSAYHLAVNREKSLEASSSS 312
           KSAY++AV    +LE   SS
Sbjct: 856 KSAYYIAVGVIDNLEVGESS 875

HSP 2 Score: 157.9 bits (398), Expect = 2.5e-34
Identity = 84/230 (36.52%), Postives = 144/230 (62.61%), Query Frame = 0


Query: 10  WLKFKETKEIIKDSWRTEEGVGAHKINLRLGKCIQNLHRWSKKRLKGSISAAVNRKEEEV 69
           W + K+   I+K +W+   G     +N +L   + N+H W +++  GSI   + + + E+
Sbjct: 2   WTQHKDHITIVKKAWQQANG----NLNKKLASILHNMHTWGQQQF-GSIPKKIKKVQSEL 61

Query: 70  QYLSSRED--SLIEGEVERAEAELESLLEEEEFYWRSRSREVWLKSGDKNTKWFHTKANQ 129
           Q L+S+ D  ++I+ ++   EAEL+ LLE EE +W  RSR +WL+ GDKNTK+FH KA+Q
Sbjct: 62  QELNSKSDMNNMIQ-QIHNKEAELDKLLENEEMWWCQRSRVMWLQHGDKNTKFFHQKASQ 121

Query: 130 RRKINKIDGVVDHKGDWVSEERQIGMVASDYFRELFRTSSPDQDEIHDVIRCVENKISEE 189
           RR+ NKID + D +G+  S+  ++  +  ++F+ELF  +S D   I   ++ V+NKI+ E
Sbjct: 122 RRQRNKIDSIQDKQGNTQSDHGEVENILLNHFKELF--TSQDTHNIETTVKVVKNKITPE 181

Query: 190 DKILLDQPYSRKEVEDAMKSLSPSKAPGCDGIHASFFQSYWEVVGEDIVQ 238
               L+  Y+ +EV +A+K +    APG DG+ A F+ +YWE++G+++ +
Sbjct: 182 MYDYLNTNYTEEEVLEAIKHMKGLAAPGPDGLPAIFYHNYWEIIGQEVTK 223

[Close]

BLAST of Lcy11g015470 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 73.2 bits (178), Expect = 7.5e-13
Identity = 52/176 (29.55%), Postives = 89/176 (50.57%), Query Frame = 0


Query: 322 QELSRQIRRNLEEQR-KGRKDNQWMLSSENQGNQEVWTPPPAGLLKINVDASWNNDQRRG 381
           QE+ R+   +LEE R +   ++       N+ +   W PPP   +K N DA+WN D  R 
Sbjct: 384 QEVLRRAEDDLEEWRIRTEAESCGTKPQVNRSSCGRWRPPPHQWVKCNTDATWNRDNERC 443

Query: 382 GVGWIIRDSQGSSVGMGSAKIKRGWSIRTMEAVAVKEGLKAYLAAKGESQSRILIESDSI 441
           G+GW++R+ +G    MG+  + +  S+   E  A++    A L+      + ++ ESDS 
Sbjct: 444 GIGWVLRNEKGEVKWMGARALPKLKSVLEAELEAMR---WAVLSLSRFQYNYVIFESDSQ 503

Query: 442 EVVRALNHEIEDASETRVILDEIHQLSSLAGEVSFVKCPRVVNGIAHLIARSTAGF 497
            ++  LN++ E     +  + ++ +L S   EV FV  PR  N +A  +AR +  F
Sbjct: 504 VLIEILNND-EIWPSLKPTIQDLQRLLSQFTEVKFVFIPREGNTLAERVARESLSF 555

[Close]

BLAST of Lcy11g015470 vs. TAIR 10
Match: AT2G34320.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 62.4 bits (150), Expect = 1.3e-09
Identity = 52/175 (29.71%), Postives = 82/175 (46.86%), Query Frame = 0


Query: 323 ELSRQIRRNLEEQRKGRKDNQWMLSSENQGNQEV-WTPPPAGLLKINVDASWNNDQRRGG 382
           E+ R+   + EE    R+        + + N  V W  PP   +K N DA+W  +  R G
Sbjct: 102 EVLRRAMEDFEEWSTRRELEGKASGPQVERNLSVQWKAPPYQWVKCNTDATWQLENPRCG 161

Query: 383 VGWIIRDSQGSSVGMGSAKIKRGWSIRTMEAVAVKEGLKAYLAAKGESQSRILIESDSIE 442
           +GWI+R+  G  + MG+  + R  ++   E  A++    A L     +  RI+ ESD+  
Sbjct: 162 IGWILRNESGGVLWMGARALPRTKNVLEAELEALR---WAVLTMSRFNYKRIIFESDAQA 221

Query: 443 VVRALNHEIEDASETRVILDEIHQLSSLAGEVSFVKCPRVVNGIAHLIARSTAGF 497
           +V  LN + +     +  L++I QL     EV F   PR  N +A  IAR +  F
Sbjct: 222 LVNLLNSD-DFWPTLQPALEDIQQLLHHFEEVKFEFTPRGGNKVADRIARESISF 272

[Close]

BLAST of Lcy11g015470 vs. TAIR 10
Match: AT1G43760.1 (DNAse I-like superfamily protein )

HSP 1 Score: 53.1 bits (126), Expect = 8.0e-07
Identity = 63/229 (27.51%), Postives = 99/229 (43.23%), Query Frame = 0


Query: 23  SWRTEEGVGAHKINL-----RLGKCIQNLHRWSKKRLKGSISAAVNRKEE-EVQYLSSRE 82
           +W  +  VG+H  +L        KC + L+R     ++     A++  E  + Q L++  
Sbjct: 351 AWEEQIPVGSHMFSLGEHLKAAKKCCKLLNRQGFGNIQHKTKEALDSLESIQSQLLTNPS 410

Query: 83  DSLIEGEVERAEAELESLLEEEEFYWRSRSREVWLKSGDKNTKWFH--TKANQRRKINKI 142
           DSL   E   A  +        E ++R +SR  WL+ GD NT++FH    ANQ + + K 
Sbjct: 411 DSLFRVE-HVARKKWNFFAAALESFYRQKSRIKWLQDGDANTRFFHKVILANQAKNLIKF 470

Query: 143 DGVVDHKGDWVSEERQIGMVASDYFRELFRTSS----PDQ-DEIHDV--IRCVENKISEE 202
             + D     V    Q+  +   Y+  L  + S    PD    I D+   RC +   S  
Sbjct: 471 LRMDDDVR--VENVTQVKEMIVAYYTHLLGSDSDILTPDSVQRIKDIHPFRCNDTLASR- 530

Query: 203 DKILLDQPYSRKEVEDAMKSLSPSKAPGCDGIHASFFQSYWEVVGEDIV 237
               L    S KE+  A+ ++  +KAPG D   A FF   W VV +  +
Sbjct: 531 ----LSALPSDKEITAAVFAMPRNKAPGPDSFTAEFFWESWFVVKDSTI 571

[Close]

BLAST of Lcy11g015470 vs. TAIR 10
Match: AT5G65005.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 52.0 bits (123), Expect = 1.8e-06
Identity = 40/154 (25.97%), Postives = 65/154 (42.21%), Query Frame = 0


Query: 345 MLSSENQGNQEV-------WTPPPAGLLKINVDASWNNDQRRGGVGWIIRDSQGSSVGMG 404
           M + +  GN+         W+PP    LK N DAS +      G+GWI+R+SQG+ +  G
Sbjct: 86  MTNEQQNGNRNADPSRNTKWSPPGRDKLKCNYDASHHERNTVSGLGWILRNSQGTVIECG 145

Query: 405 SAKIKRGWSIRTMEAVAVKEGLKAYLAAKGESQSRILIESDSIEVVRALNHEIEDASETR 464
             K +      T E       + A  A+ G    +++ E D+  + R +N +  +    +
Sbjct: 146 MGKFQ---GRMTTEEAECSTLIWAIQASYGFGHKKVIFEGDNQTITRMINTKSSN-PRLQ 205

Query: 465 VILDEIHQLSSLAGEVSFVKCPRVVNGIAHLIAR 492
             LD I         + F    R  NG A  +A+
Sbjct: 206 HFLDTIQSWIPSFESIEFSFKHREQNGCADFLAK 235

[Close]

BLAST of Lcy11g015470 vs. TAIR 10
Match: AT4G09775.1 (BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily protein (TAIR:AT2G02650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 50.4 bits (119), Expect = 5.2e-06
Identity = 24/69 (34.78%), Postives = 36/69 (52.17%), Query Frame = 0


Query: 352 GNQEVWTPPPAGLLKINVDASWNNDQRRGGVGWIIRDSQGSSVGMGSAKIKRGWSIRTME 411
           G  + W+PPP G LK N D+ +   +      WIIRDS G  +  G AK+++ +S    E
Sbjct: 57  GRSKEWSPPPEGYLKCNFDSGYVQGRDYTSTCWIIRDSNGHVIHSGCAKLQQSYSALQAE 116

Query: 412 AVAVKEGLK 421
           A+     L+
Sbjct: 117 ALGFLHALQ 125

The following BLAST results are available for this feature:

BLAST of Lcy11g015470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P14381	3.0e-06	26.47	Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV...	[more]
P11369	1.2e-04	26.89	LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE...	[more]

BLAST of Lcy11g015470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2N9GPZ7	6.8e-38	35.86	Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F...	[more]
A0A2N9IPS8	6.8e-38	35.86	Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F...	[more]
A0A2N9EEA9	3.4e-37	35.17	CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS967 ...	[more]
A0A2N9EEA9	9.9e-05	43.66	CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS967 ...	[more]
A0A2N9HND5	9.9e-05	43.66	CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS4112...	[more]

BLAST of Lcy11g015470 vs. NCBI nr


Match Name	E-value	Identity	Description
KAF7844569.1	1.4e-42	35.90	protein BPS1, chloroplastic-like [Senna tora]	[more]
XP_023906330.1	1.1e-37	36.48	uncharacterized protein LOC112018052 [Quercus suber]	[more]
GAU44733.1	1.2e-36	26.52	hypothetical protein TSUD_88180 [Trifolium subterraneum]	[more]
XP_023881891.1	2.2e-35	38.72	uncharacterized protein LOC111994244 [Quercus suber]	[more]
XP_023881891.1	2.0e-07	45.00	uncharacterized protein LOC111994244 [Quercus suber]	[more]

BLAST of Lcy11g015470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29090.1	7.5e-13	29.55	Ribonuclease H-like superfamily protein	[more]
AT2G34320.1	1.3e-09	29.71	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G43760.1	8.0e-07	27.51	DNAse I-like superfamily protein	[more]
AT5G65005.1	1.8e-06	25.97	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT4G09775.1	5.2e-06	34.78	BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily prot...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 77..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 333..356
None	No IPR available	PANTHER	PTHR33710	BNAC02G09200D PROTEIN	coord: 44..226
None	No IPR available	PANTHER	PTHR33710:SF24	SUBFAMILY NOT NAMED	coord: 44..226
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 368..492 e-value: 1.1E-17 score: 63.9
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 365..495 e-value: 1.2E-13 score: 53.2
IPR044730	Ribonuclease H-like domain, plant type	CDD	cd06222	RNase_H_like	coord: 367..491 e-value: 1.9237E-20 score: 85.0584
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 364..496

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g015470.1	Lcy11g015470.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity