Lcy11g015450 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g015450
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	zinc finger CCCH domain-containing protein 18-like
Location	Chr11: 36540634 .. 36544518 (-)
RNA-Seq Expression	Lcy11g015450
Synteny	Lcy11g015450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTTGTTAAACGCGGCCTTATTTTGTCTACCATGGTTGCTTGAAGCTTTCTGTCTACTGTTCATTCTCTTGAAGAAATTCCGTCTTGATCTAAATCTTTCAAATTTGGTACTTATCCTTCCACTCTCATTTTCAATTCTAAACTTCATTTGTTTCAACATTTCTTTTTTTGTTTTGTTTTTTTCAATTATCTTGTGTTTTTTGAAATGGGTTTTTCAAAAGTTCCTTCATTTTTCGCTTTTAAAAAGATTTCCAGCATTTTTCAGAGTTTGAGACGGAGCACAGAAGAAGAAGAAGAAAAAGGAGGAGGATTCAACTTTTTTCTTTTAAAAAAAATAATTTTGAGTAGTTTTTATTTATTTTTATATGGAAAGAACATAAATTGTTTTGAGCATAAAAATTATGATGTTGGAATGTGAGAATGATTTTTGCCATATTTGATGAAAACGTTTCTGGTTTTTCTGGCACTGCCTCTTTTTAATCTAATTTTCACAGTTTGTATATTTTTCTTTCTAAAATGGTTTTATTTTTCCTTAGATTGTTATGTTTGGTTGCTTGAATGCATTATTATTTGAATTCTGAAGGTTGTTGCTTGCTTGAATTCACCCAGATCGTTTATGTTTGATTGTAGTGTTTAAATGCATAATGGAGTTTTCAGAGTACACAAGAATTGTATTCAATCGAATCAGTAAGATAGATCCAGAGAATGTTAGGAAGATCGTTGGTTTTTTACTTCTTCATGATCATGTTGATCAAGAAATGGCTCGCTTGGCACTAGGTCCTGACCAATATATCCTGGATGTGGTTTACCTAGCCAAGACGGAGCTGCATATATTAGCTCTCAGATCGATGCAGCTGTCGACGGTGTCGTCGCCGGGGGCTTTCGTTCCTCTGGCTCGAAACCGGCAGCAATTTCCATCTTCGGACAACTTTCATGCCCCTTCAACTTGGGACCAACACCTTACTAACAAACGTTCTTCTGATTACATACCATTAGGCTGCACTGATTCTATGTATGAAGTCCAAAATCCAGCTCAGTACTTTAGTTTAGATGAGCATATAGAATCGCCCAACTCCGGCCTCTCTGGCTTTGATTGCAGCTATGCTGACAATGCTGCAATGGTGAACAGCTTGATGAGTAGTACTAGGACCGCACGCCACTACTCGACCGTGTCCGAGGTTCAGACTAATAAGATATGTCACTATTACAACAAAGGATTTTGCAAGCATGGAAATAGTTGTAGGTATGTCCACAGCAACCTCATACCTGACACCTTCTCTCAGCTATATAATACCAATTCTGTCAATGATGATCATGTTTTTCGGCCCGGTTCGCTCGAGAAGTTGGAGTTTGAAATTGTTGAGCTTCTTAAATCAAGAAGAGGCACTCCTATTTCAATTGCTTCACTGCCAATGATTTACTATGAAAAGTATGGAAAAGTTCTTCAAGCTGAAGGATACCTGACTGAGAGCCAGAGGCATGGTAAATCAGGCTTTAGCTTGACCAAGCTCCTCACTCGATTGAAAAGCAGCATTCAGGTGATCGACAGGTCGGTTTCGCTTCTAAGCTATCGAAACATGCCTTTCGAATTTTAGTGAGCTTTCTATATGCTTAACATTGGTTTGTTTTGTATGTCATTCAGGCCTCATGGGCAGCACGCAGTCATCTTGGCAGAAGATGCTTCTAAATTCATCGACCATCGGAATGAGAAGAACGACCCCGGTCCGATCGTTAGCAGCGCACGACAAATATATTTGACATTTCCAGCTGACAGCACCTTCACTGAAAATGATGTTGCTGATTACTTCAGGTGAATGCTTGTTTTAGCCTCTCCTTTGATTTGATACAATTTATTGGCATTCTCTTCGTTTCCAACTGTTTTGCAAATATCTTGTGTGTGTGTGTAGTGACCACTATGGATTGGTTGAAGATGTAAGGATCCCTTGCCAACAAAGAAGGATGTTCGGGTTCGTGACGTTTCACAGTATCGAAACTGTGAAACTAATCTTGTCACAGGACAGCGAGCATTTAATTTGCGGCGCTCGGGTTCTGGTGAAACCTTACAGGGAAAAGTCTAAGCTTTTGGAAAGGTTTACTACTAATACTTTGATTAGTATTCCATTCCTCTGGGCTGTTCCATCTGCATTGCCTTGAACTTGTTGATACTCGTGTTCACTTAGTCTCTTTGGTATCATTCTTATTCGATTCAGGAAGTTCCAAGAAAAATTTGAACAGCAACAGCATCAGCAAACTTATTATTCTCCGCACTATAACGACCTCGAAGCCGAGCAGCAGCTTCACTCAAGTAAGTAGGAAACCAAATACATATATTTTCTCAAATCCTATTTGTTTGGTTGTCTGGTTTAGTCATGACATCCTTTGTAACAAATTAATGATTCCAGTTCCAAGAGGCTATGAGGCCTCTAGACTGCTGAGGCTGAGGCTGGAAGAAGAAGAACAACAACAACAACAGGCACTCGAAGTCGAGAGGAGGCTTTCGGAGATGAGCTTAATGCAGAAATCTGTACTAAATCAGCCCTACTTCAGCTATCAGATGAAGGAACTGAAAGTTCCAGAAGGTCATTGCTCATTAGCTTATTAATGAATGAATCAGCTTTCTGTTCCCTCTGTCTAAATTAACAATTGAAGTTATAACATAACATGTGCATTGTGCAGAGCATTTCAGTTTCCCAACTACAGATAGGTTTGATCATCTGTTGGAAGTTTTGAAAAGTGGCTCTGGCTCTCGCTCTGGCTCTCTCAGTGATGATAATATTAATAAGCCACCTCGAAACCCGACGGATTGGAATCACCCGAACCTCGAGCACCTCGAACTCGACCTCGATAGGTAAAACAAAACATACTTGGTCCATGTCATGGTGAAATGGTTAATGATTTTGGTGTGTTTGTTTGATGTTGATGGCAGTGAAGTATATAATCTACCAGACAGCCCATTTGAATCTCCAACAGGAAGTAACACATAGGAAGTGACACAATCCTCCAGACTCACATAGGATTACCAAATCAAGTTTTTGTTACATAGAGAAGGAAGGAAGGAAGGAAGGAAGCAGTTAATAGAGTTTCAAATTCTACCATTACCATTTCATTCATGACAGTCATCTTCTTCTTGGCTACCATTTCCATTTCATTCATGACAGACCCGTCTTTGGAGTATATAGAATCAGAACAGCTTATGTGATGAGTAGTATTAGTGAATGTTATGCACAGAAAAAGAAAAACATGTAAGGAAGATTCTAAGGTTTCTTTTTTCTTTTCATAATAATTTTCAGATACAAGGATGAAGAGAAGAGGTTTCTCTTTGGCCTTTAGACATAGAAATATAGGATTTTGGATTTTGGATTTTGTAGGTGTAAGGAACCACAATACATCAATCTCTTGAAAGATTGTGAAATGTTACTAGAATCTTCATGCAATGAATAAAAGTGTTTTGTTCTTTAATTATTTCTTCCTTCTTTTTCTTTGTTAATGCAATTAACATCTTGTCTAAGACTGGTTTTATTACAATACTACTCTATGACCAAAGAAGAGGGAAATTGTAAAAAATAGGACAAAATGATGGGGGTTAAAGAGATTTAGGATGATTTTTATTTTATAGAGTAGTGAGGATGTGAAATTACTATGTTGCCTTTCTTAGAAAAATCCCTAATTTCACTTTTTTTTTTTTTTTTTTGTAGTCTCTCACGCAACTTTCTCTTCCTTCATGCACATTTCTCCTTCACCCACCATCAAGTGATTGAAGCTCCACATCAACCTTGAAATCTTCCTCTTTGGCTAGACGCTTGAGAAACTTTCTTCACAATTTTATATGTTGATGAAAAAATTTGCTTCTTCACTTTTACTTTGCTGCTGGAGGAACAAAAT

mRNA sequence

ATGGTTTGTTAAACGCGGCCTTATTTTGTCTACCATGGTTGCTTGAAGCTTTCTGTCTACTGTTCATTCTCTTGAAGAAATTCCGTCTTGATCTAAATCTTTCAAATTTGTGTTTAAATGCATAATGGAGTTTTCAGAGTACACAAGAATTGTATTCAATCGAATCAGTAAGATAGATCCAGAGAATGTTAGGAAGATCGTTGGTTTTTTACTTCTTCATGATCATGTTGATCAAGAAATGGCTCGCTTGGCACTAGGTCCTGACCAATATATCCTGGATGTGGTTTACCTAGCCAAGACGGAGCTGCATATATTAGCTCTCAGATCGATGCAGCTGTCGACGGTGTCGTCGCCGGGGGCTTTCGTTCCTCTGGCTCGAAACCGGCAGCAATTTCCATCTTCGGACAACTTTCATGCCCCTTCAACTTGGGACCAACACCTTACTAACAAACGTTCTTCTGATTACATACCATTAGGCTGCACTGATTCTATGTATGAAGTCCAAAATCCAGCTCAGTACTTTAGTTTAGATGAGCATATAGAATCGCCCAACTCCGGCCTCTCTGGCTTTGATTGCAGCTATGCTGACAATGCTGCAATGGTGAACAGCTTGATGAGTAGTACTAGGACCGCACGCCACTACTCGACCGTGTCCGAGGTTCAGACTAATAAGATATGTCACTATTACAACAAAGGATTTTGCAAGCATGGAAATAGTTGTAGGTATGTCCACAGCAACCTCATACCTGACACCTTCTCTCAGCTATATAATACCAATTCTGTCAATGATGATCATGTTTTTCGGCCCGGTTCGCTCGAGAAGTTGGAGTTTGAAATTGTTGAGCTTCTTAAATCAAGAAGAGGCACTCCTATTTCAATTGCTTCACTGCCAATGATTTACTATGAAAAGTATGGAAAAGTTCTTCAAGCTGAAGGATACCTGACTGAGAGCCAGAGGCATGGTAAATCAGGCTTTAGCTTGACCAAGCTCCTCACTCGATTGAAAAGCAGCATTCAGGTGATCGACAGGCCTCATGGGCAGCACGCAGTCATCTTGGCAGAAGATGCTTCTAAATTCATCGACCATCGGAATGAGAAGAACGACCCCGGTCCGATCGTTAGCAGCGCACGACAAATATATTTGACATTTCCAGCTGACAGCACCTTCACTGAAAATGATGTTGCTGATTACTTCAGTGACCACTATGGATTGGTTGAAGATGTAAGGATCCCTTGCCAACAAAGAAGGATGTTCGGGTTCGTGACGTTTCACAGTATCGAAACTGTGAAACTAATCTTGTCACAGGACAGCGAGCATTTAATTTGCGGCGCTCGGGTTCTGGTGAAACCTTACAGGGAAAAGTCTAAGCTTTTGGAAAGGAAGTTCCAAGAAAAATTTGAACAGCAACAGCATCAGCAAACTTATTATTCTCCGCACTATAACGACCTCGAAGCCGAGCAGCAGCTTCACTCAATTCCAAGAGGCTATGAGGCCTCTAGACTGCTGAGGCTGAGGCTGGAAGAAGAAGAACAACAACAACAACAGGCACTCGAAGTCGAGAGGAGGCTTTCGGAGATGAGCTTAATGCAGAAATCTGTACTAAATCAGCCCTACTTCAGCTATCAGATGAAGGAACTGAAAGTTCCAGAAGAGCATTTCAGTTTCCCAACTACAGATAGGTTTGATCATCTGTTGGAAGTTTTGAAAAGTGGCTCTGGCTCTCGCTCTGGCTCTCTCAGTGATGATAATATTAATAAGCCACCTCGAAACCCGACGGATTGGAATCACCCGAACCTCGAGCACCTCGAACTCGACCTCGATAGTCTCTCACGCAACTTTCTCTTCCTTCATGCACATTTCTCCTTCACCCACCATCAAGTGATTGAAGCTCCACATCAACCTTGAAATCTTCCTCTTTGGCTAGACGCTTGAGAAACTTTCTTCACAATTTTATATGTTGATGAAAAAATTTGCTTCTTCACTTTTACTTTGCTGCTGGAGGAACAAAAT

Coding sequence (CDS)

ATGGAGTTTTCAGAGTACACAAGAATTGTATTCAATCGAATCAGTAAGATAGATCCAGAGAATGTTAGGAAGATCGTTGGTTTTTTACTTCTTCATGATCATGTTGATCAAGAAATGGCTCGCTTGGCACTAGGTCCTGACCAATATATCCTGGATGTGGTTTACCTAGCCAAGACGGAGCTGCATATATTAGCTCTCAGATCGATGCAGCTGTCGACGGTGTCGTCGCCGGGGGCTTTCGTTCCTCTGGCTCGAAACCGGCAGCAATTTCCATCTTCGGACAACTTTCATGCCCCTTCAACTTGGGACCAACACCTTACTAACAAACGTTCTTCTGATTACATACCATTAGGCTGCACTGATTCTATGTATGAAGTCCAAAATCCAGCTCAGTACTTTAGTTTAGATGAGCATATAGAATCGCCCAACTCCGGCCTCTCTGGCTTTGATTGCAGCTATGCTGACAATGCTGCAATGGTGAACAGCTTGATGAGTAGTACTAGGACCGCACGCCACTACTCGACCGTGTCCGAGGTTCAGACTAATAAGATATGTCACTATTACAACAAAGGATTTTGCAAGCATGGAAATAGTTGTAGGTATGTCCACAGCAACCTCATACCTGACACCTTCTCTCAGCTATATAATACCAATTCTGTCAATGATGATCATGTTTTTCGGCCCGGTTCGCTCGAGAAGTTGGAGTTTGAAATTGTTGAGCTTCTTAAATCAAGAAGAGGCACTCCTATTTCAATTGCTTCACTGCCAATGATTTACTATGAAAAGTATGGAAAAGTTCTTCAAGCTGAAGGATACCTGACTGAGAGCCAGAGGCATGGTAAATCAGGCTTTAGCTTGACCAAGCTCCTCACTCGATTGAAAAGCAGCATTCAGGTGATCGACAGGCCTCATGGGCAGCACGCAGTCATCTTGGCAGAAGATGCTTCTAAATTCATCGACCATCGGAATGAGAAGAACGACCCCGGTCCGATCGTTAGCAGCGCACGACAAATATATTTGACATTTCCAGCTGACAGCACCTTCACTGAAAATGATGTTGCTGATTACTTCAGTGACCACTATGGATTGGTTGAAGATGTAAGGATCCCTTGCCAACAAAGAAGGATGTTCGGGTTCGTGACGTTTCACAGTATCGAAACTGTGAAACTAATCTTGTCACAGGACAGCGAGCATTTAATTTGCGGCGCTCGGGTTCTGGTGAAACCTTACAGGGAAAAGTCTAAGCTTTTGGAAAGGAAGTTCCAAGAAAAATTTGAACAGCAACAGCATCAGCAAACTTATTATTCTCCGCACTATAACGACCTCGAAGCCGAGCAGCAGCTTCACTCAATTCCAAGAGGCTATGAGGCCTCTAGACTGCTGAGGCTGAGGCTGGAAGAAGAAGAACAACAACAACAACAGGCACTCGAAGTCGAGAGGAGGCTTTCGGAGATGAGCTTAATGCAGAAATCTGTACTAAATCAGCCCTACTTCAGCTATCAGATGAAGGAACTGAAAGTTCCAGAAGAGCATTTCAGTTTCCCAACTACAGATAGGTTTGATCATCTGTTGGAAGTTTTGAAAAGTGGCTCTGGCTCTCGCTCTGGCTCTCTCAGTGATGATAATATTAATAAGCCACCTCGAAACCCGACGGATTGGAATCACCCGAACCTCGAGCACCTCGAACTCGACCTCGATAGTCTCTCACGCAACTTTCTCTTCCTTCATGCACATTTCTCCTTCACCCACCATCAAGTGATTGAAGCTCCACATCAACCTTGA

Protein sequence

MEFSEYTRIVFNRISKIDPENVRKIVGFLLLHDHVDQEMARLALGPDQYILDVVYLAKTELHILALRSMQLSTVSSPGAFVPLARNRQQFPSSDNFHAPSTWDQHLTNKRSSDYIPLGCTDSMYEVQNPAQYFSLDEHIESPNSGLSGFDCSYADNAAMVNSLMSSTRTARHYSTVSEVQTNKICHYYNKGFCKHGNSCRYVHSNLIPDTFSQLYNTNSVNDDHVFRPGSLEKLEFEIVELLKSRRGTPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKSSIQVIDRPHGQHAVILAEDASKFIDHRNEKNDPGPIVSSARQIYLTFPADSTFTENDVADYFSDHYGLVEDVRIPCQQRRMFGFVTFHSIETVKLILSQDSEHLICGARVLVKPYREKSKLLERKFQEKFEQQQHQQTYYSPHYNDLEAEQQLHSIPRGYEASRLLRLRLEEEEQQQQQALEVERRLSEMSLMQKSVLNQPYFSYQMKELKVPEEHFSFPTTDRFDHLLEVLKSGSGSRSGSLSDDNINKPPRNPTDWNHPNLEHLELDLDSLSRNFLFLHAHFSFTHHQVIEAPHQP

Homology

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BLAST of Lcy11g015450 vs. ExPASy Swiss-Prot
Match: Q9SJ41 (Zinc finger CCCH domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=At2g05160 PE=2 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 7.7e-101
Identity = 227/543 (41.80%), Postives = 324/543 (59.67%), Query Frame = 0


Query: 1   MEFSEYTRIVFNRISKIDPENVRKIVGFLLL-HDHVDQEMARLALGPDQYILDVVYLAKT 60
           M F+E   +V  RI +++PEN  KI G+LLL  ++ +++M RLA  PD  +  V+   K 
Sbjct: 1   MNFTESMNVVHARIQQLEPENAAKIFGYLLLMQENGNRDMIRLAFCPDSVMCSVINCVKY 60

Query: 61  ELHILALRSMQLSTVSSPGAFVPLARNRQQFPSSDNFHAPSTWDQHLTNKRS-----SDY 120
           E                      LARN   + S  + H P+      T         S  
Sbjct: 61  E----------------------LARNSHHYHSPPSDHIPTPKFGSFTGSSPLSVSVSPP 120

Query: 121 IPLGCTDSMYE---VQNPAQYFSLDEHIESPNSGLSGFDCSYADNAAMVNSLMSSTRTAR 180
           +  G  ++  E   +QN  Q+ + ++ + SP          +++            RT+R
Sbjct: 121 MKTGFWENSTEMDTLQNNLQFLNFEDPLTSP---------EFSNGFFSQERQCLPLRTSR 180

Query: 181 HYSTVSEVQTNKICHYYNKGFCKHGNSCRYVHSNLIP--DTFSQLYNTNS--VNDDHVFR 240
              ++ E    KICHY+NKGFCKHGN+CRY H  +IP  ++F+Q++N N+   +++HV  
Sbjct: 181 RSPSLPEFPV-KICHYFNKGFCKHGNNCRYFHGQIIPERESFAQMFNPNNNLSDEEHVVS 240

Query: 241 PGSLEKLEFEIVELLKSRRGTPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLT 300
           P SLEKLE EI+ELLK RRG PISIASLPM+YYEKYG+ LQAEGYLTESQRHGK+G+SLT
Sbjct: 241 PVSLEKLEGEIIELLKLRRGAPISIASLPMMYYEKYGRTLQAEGYLTESQRHGKAGYSLT 300

Query: 301 KLLTRLKSSIQVIDRPHGQHAVILAEDASKFIDHRNEKNDPGPIVSSARQIYLTFPADST 360
           KLL RLK++I+++DRPHGQH+VILAEDASKF+++  E+N+ G I++ +RQIYLTFPA+S+
Sbjct: 301 KLLARLKNTIRLVDRPHGQHSVILAEDASKFVEYTGERNEHGAILAGSRQIYLTFPAESS 360

Query: 361 FTENDVADYFSDHYGLVEDVRIPCQQRRMFGFVTFHSIETVKLILSQDSEHLICGARVLV 420
           FTE+DV+ YF+  YG VEDVRIPCQQ+RM+GFVTF S ETVK IL++ + H IC ARVLV
Sbjct: 361 FTEHDVSIYFTS-YGHVEDVRIPCQQKRMYGFVTFASSETVKHILAKGNPHFICNARVLV 420

Query: 421 KPYREKSKLLERKFQEKFEQQQHQQTYYSPHYNDLEAEQQLHSI-PRGYEASRLLRLRLE 480
           KPYREKS+    ++ + + +  H   Y S     +E + +++++ PR  E+SR+ +  L 
Sbjct: 421 KPYREKSR--SSRYLDNY-KPLHGMRYGSKF---IERDIEMNTLPPRVSESSRMRKPFLS 480

Query: 481 EEEQQQQQALEVERRLSEMSLMQKSVLNQPYFSYQMKELKVPEEHFSFPTTDRFDHLLEV 530
           E EQ   ++L                 N  Y  +   + K+          +R  +LL+ 
Sbjct: 481 EPEQSVSKSLPT---------------NYSYLGFSSDDFKLTSNAEQEEQAERLSYLLDY 489

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BLAST of Lcy11g015450 vs. ExPASy Swiss-Prot
Match: Q6ZK57 (Zinc finger CCCH domain-containing protein 54 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0126700 PE=2 SV=2)

HSP 1 Score: 306.2 bits (783), Expect = 8.0e-82
Identity = 205/548 (37.41%), Postives = 295/548 (53.83%), Query Frame = 0


Query: 1   MEFSEYTRIVFNRISKIDPENVRKIVGFLLLHDHVDQEMARLALGPDQYILDVVYLAKTE 60
           ME  E  ++ F R+ +++PE+V KI G +LL +  + E+ +LA GP+  +L  +   K  
Sbjct: 50  MEVPELVKLAFARVQRVEPEHVGKIFGVMLLREPDEDELVQLAYGPEATLLAKIEDTKAA 109

Query: 61  LHILALRSMQLSTVSSPGA---------------------------------FVPLARNR 120
           L ++  R    +    PG                                  + P A   
Sbjct: 110 LTVIYARCSAAAAHGPPGGGGVGVGGGGGYHQQPQQLFSRPPVPACGGVRHHYSPAAAAA 169

Query: 121 QQFPSSDNFHAPSTWDQH----LTNKRSSDYIPLG-CTDSMYEVQNPAQYFSLDEHIESP 180
             F       +P  W        T     ++ P G   D+  E   P +     +H+   
Sbjct: 170 AAF--GYQVQSPQYWPDSPPAPPTKAAQQEFAPPGLVVDASAEGPYPLRG---GQHVLDD 229

Query: 181 NSGLSGFDCSYADNAAMVNSLMSSTRTARHYSTVSEVQTNKICHYYNKGFCKHGNSCRYV 240
           N+   G+     ++A            AR   + + + T + CHY++KG CK+G +C Y 
Sbjct: 230 NNFGGGYYYPAGEDAFPNGGGGGGGSPARARRS-NGLSTRRPCHYFSKGICKNGQNCHYS 289

Query: 241 HSNLIPDTFSQLYNTNSVNDDHV--FRPGSLEKLEFEIVELLKSRRGTPISIASLPMIYY 300
           H  +  D  +       V +       PGSLE LE EI ELL SRRG P+SIASLP +Y 
Sbjct: 290 HHQVYQDALAGAAINGDVYNHQPGGVTPGSLETLEMEITELLNSRRGQPVSIASLPTLYG 349

Query: 301 EKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKSSIQVIDRPHGQHAVILAEDASKFID 360
           EKYGK LQA+GYLTESQRHGK+G+SLT+LL+RL + I+VI+RPHGQH+V+LAEDA+K++D
Sbjct: 350 EKYGKGLQADGYLTESQRHGKAGYSLTRLLSRL-NKIRVIERPHGQHSVVLAEDAAKYMD 409

Query: 361 HR----NEKNDPGPIVSSARQIYLTFPADSTFTENDVADYFSDHYGLVEDVRIPCQQRRM 420
            R        D G + +S+ QIYLTFPA+STF E+DVA+YF   YG V DVRIPCQ+RRM
Sbjct: 410 FRGGGGGGGGDTGSVPASSHQIYLTFPAESTFAEDDVANYFG-QYGPVRDVRIPCQERRM 469

Query: 421 FGFVTFHSIETVKLILSQDSEHLICGARVLVKPYREKSKLLERKFQEKFEQQQHQQTYYS 480
           FGFV+F S ETV  IL + + H ICG+RVLVKPYREKSK ++R   +  +       Y  
Sbjct: 470 FGFVSFQSPETVSTILMRRNPHFICGSRVLVKPYREKSKCVDRTCVDNIKS---MVPYCP 529

Query: 481 PHYNDLEAEQQLHSIPRGYEASRLLRLRLEEEEQQQQQALEVERRLSEMSLMQKSVLNQP 505
           P +   E +Q+L++    Y+ASRL+R +L E   +++  LE+ERR + +  ++       
Sbjct: 530 PRF--FEFDQELYTAE--YDASRLMRKQLAE---KREMLLEMERRRATVRRLESMPPQFA 579

[Close]

BLAST of Lcy11g015450 vs. ExPASy Swiss-Prot
Match: Q84ZT0 (Putative zinc finger CCCH domain-containing protein 51 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0583300 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 2.9e-47
Identity = 113/247 (45.75%), Postives = 161/247 (65.18%), Query Frame = 0


Query: 177 SEVQTNKICHY-YNKGFCKHGNSCRYVHSNLIPDTFSQLYNTNSVNDDHVFRPGSLEKLE 236
           S   ++K CH+ + +G+CK G +C++ H ++      +L+N   V   H F   SL KL+
Sbjct: 174 SSKSSSKPCHFHFFRGYCKKGVNCQFFHGSV-----PELHNPRQV---HPF--ASLSKLD 233

Query: 237 FEIVELLKSRRGTPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKS 296
            EI ELL      P+++  LP +Y+EKYGK L+ +G+LTESQ+HG++G SLT LL  L +
Sbjct: 234 MEIRELLIG-IPPPVAVDRLPSMYFEKYGKPLRPDGWLTESQQHGRTGCSLTSLLMGL-N 293

Query: 297 SIQVIDRPHGQHAVILAEDA-SKFID-----HRNEKNDPGPIVSSARQIYLTFPADSTFT 356
           +I+V++R HGQ+ V+L EDA  K++D     H     D G   + + QIY+TFP  S FT
Sbjct: 294 TIRVVEREHGQYHVVLVEDARKKYMDCLGLAHSCNLMDTG---TGSNQIYMTFPVHSKFT 353

Query: 357 ENDVADYFSDHYGLVEDVRIPCQQRRMFGFVTFHSIETVKLILSQDSEHLICGARVLVKP 416
           ++DV +YF   +G V  VRIP Q++RMFGFV+F   ETV+LILS+ + H ICG RVLVK 
Sbjct: 354 DDDVENYFK-QFGPVSGVRIPYQEKRMFGFVSFLYTETVRLILSKGTAHFICGLRVLVKR 404

[Close]

BLAST of Lcy11g015450 vs. ExPASy Swiss-Prot
Match: Q0D3J9 (Zinc finger CCCH domain-containing protein 53 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0682400 PE=2 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 6.2e-42
Identity = 172/557 (30.88%), Postives = 269/557 (48.29%), Query Frame = 0


Query: 1   MEFSEYTRIVFNRISKIDPENVRKIVGFLLLHDHVDQEMARLALGPDQYILDVVYLAKTE 60
           M+  E T++VF+RI  +DP++  KI+GFLL+ DH ++EM RLA GP+  +  V+  A+ E
Sbjct: 1   MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGEKEMIRLAFGPEALLHTVMAKARKE 60

Query: 61  LHILALRSMQLST---VSSPGAFVPLARNRQQ------FPSSDNFHAPSTW--------D 120
           L +L        T    ++  A  P   +RQ        PS  +  +PS+W        +
Sbjct: 61  LGLLPASGPGTPTSVAAAAAAAHSPFMLSRQNSGRCGTAPSPLSVSSPSSWAPPPVFSRN 120

Query: 121 QHLTNKRSSDYIPLGCTDSMYEVQN----PAQYF---------SLDEHIESPNSG----- 180
             ++N    + + LG  D +    N    P+ +F          L + +   N G     
Sbjct: 121 NSISNGAGEEMVGLG--DELISPANGGGPPSPFFGGDPLMDELQLQDQLAFLNEGGVPAG 180

Query: 181 -----LSGFDCS---------YADNAAMVNSLMSSTRTARHYSTVSEVQTN-------KI 240
                  G +C          ++ N    N      R+A    +VSE+          K 
Sbjct: 181 HQMPMFDGGECRSPGGGDGGLFSYNLGWANGGPGHRRSA----SVSELCLGGADGLGWKP 240

Query: 241 CHYYNKGFCKHGNSCRYVHSNLIPDTFSQLYNTNSVNDDHVFRPGSLEKLEFEIVELLKS 300
           C YY +G+CK+G++CR+VH  L  D   ++             P ++E+   + +   KS
Sbjct: 241 CLYYARGYCKNGSACRFVHGGLPDDAAGKM------------DPSAVEQQCQDFLIRSKS 300

Query: 301 RRGTPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKSSIQVIDRPH 360
           +R   ++ A+ P   Y   G +  +    T+             LL + +       R  
Sbjct: 301 QR---LAAAAFP---YSPTGSLPGSPSAATK----------CLSLLLQQQQQQNESQRAA 360

Query: 361 GQHAVIL-AEDASKFIDH-RNEKNDPGPIVS-SARQIYLTFPADSTFTENDVADYFSDHY 420
              A++L  ++A KF+   R E+ D   +++  +RQIYLTFPADSTF E DV++YFS  Y
Sbjct: 361 AAAALMLGGDEAHKFMGRPRLERADFASMMNPGSRQIYLTFPADSTFREEDVSNYFS-IY 420

Query: 421 GLVEDVRIPCQQRRMFGFVTFHSIETVKLILSQDSEHLICGARVLVKPYREKSKLLER-K 480
           G V DVRIP QQ+RMFGFVTF   ETVKLIL++ + H IC ARVLVKPY+EK K+ ++ +
Sbjct: 421 GPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPDKYR 480

Query: 481 FQEKFEQQQHQQTYYSPHYNDLEAEQQLHSI-PRGYEASR-----LLRLRLEEEEQ--QQ 489
            Q +  ++    +  +P   D      +H +  R  + S      LLR +LEE++Q  + 
Sbjct: 481 KQHQPGERVDFSSCTTPTGLDARDPFDMHQLGARMLQHSNSANEMLLRRKLEEQQQAAEL 522

[Close]

BLAST of Lcy11g015450 vs. ExPASy Swiss-Prot
Match: Q10LZ9 (Zinc finger CCCH domain-containing protein 23 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0329200 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.1e-41
Identity = 174/553 (31.46%), Postives = 258/553 (46.65%), Query Frame = 0


Query: 1   MEFSEYTRIVFNRISKIDPENVRKIVGFLLLHDHVDQEMARLALGPDQYILDVVYLAKTE 60
           M+  E T++VF+RI  +DP++  KI+G LL+ DH D+EM RLA GP+  +  V+  A+ E
Sbjct: 1   MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGDKEMIRLAFGPEALLHSVMAQARKE 60

Query: 61  LHILALRSMQLSTVSSPGAFVPLARNRQQFPSSDNFHAPSTWDQHLTNKRSSDYIPLGCT 120
           L +L       S+ + P A  P   +RQ         +PS+W Q     RS+     G  
Sbjct: 61  LALLPPPQAASSSPTVPAAHSPFLLSRQN-SGRCPAPSPSSWAQAQPFSRSNSMGNGGAA 120

Query: 121 DSMY----EVQNP----------------------AQYFSLDEHIESPNSGLSGFDCSYA 180
           D M     E+ +P                         F L E +   + G  G +  +A
Sbjct: 121 DEMVGAGEELMSPLNGGGGAAANAPPFFPRGGDALLDDFELQEQLAFLHDGAGGVNPGHA 180

Query: 181 ---------------DNAAMVNSLMSSTRTA---RHYSTVSEVQTN------KICHYYNK 240
                          ++  M+   ++        R  ++V+E+         K C YY +
Sbjct: 181 LQAFDGAECRSPGPGESGGMLPYGLAWANGGPGHRRSASVNELCLGGDGFGWKPCLYYAR 240

Query: 241 GFCKHGNSCRYVHSNLIPDTFSQLYNTNSVNDDHVFRPGSLEKLEFEIVEL-LKSRRGTP 300
           GFCK+G++CR+VH  L              +DD      + E+ + +   L  KS+R  P
Sbjct: 241 GFCKNGSTCRFVHGGL--------------SDDAAMDATTAEQQQCQDFLLRSKSQRLGP 300

Query: 301 ISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKSSIQVIDRPHGQHAV 360
            +    P              G L  S        SL      L+   Q  D      A 
Sbjct: 301 AAFPFTP-------------TGSLPASPSATSKCLSLL-----LQQQQQHNDNQRAAAAA 360

Query: 361 IL---AEDASKFIDH-RNEKNDPGPIVS-SARQIYLTFPADSTFTENDVADYFSDHYGLV 420
           ++    ++A KF+   R ++ D   +++  +RQIYLTFPADSTF E DV++YFS  YG V
Sbjct: 361 LMLAGGDEAHKFMGRPRLDRVDFASMMNPGSRQIYLTFPADSTFREEDVSNYFS-IYGPV 420

Query: 421 EDVRIPCQQRRMFGFVTFHSIETVKLILSQDSEHLICGARVLVKPYREKSKLLERKFQEK 480
            DVRIP QQ+RMFGFVTF   ETVKLIL++ + H IC ARVLVKPY+EK K+ + K++  
Sbjct: 421 HDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPD-KYR-- 480

Query: 481 FEQQQHQQTYYSPHYNDLEAEQQLHSI-PRGYEASR-----LLRLRLEEEEQ--QQQQAL 489
            +QQQ      SP   D       H +  R  + S      +LR +LEE++Q  + QQA+
Sbjct: 481 -KQQQGDFCCMSPTGLDARDPFDFHQLGARMLQHSNSANELMLRRKLEEQQQAAELQQAI 515

[Close]

BLAST of Lcy11g015450 vs. ExPASy TrEMBL
Match: A0A6J1KX51 (zinc finger CCCH domain-containing protein 18-like OS=Cucurbita maxima OX=3661 GN=LOC111498363 PE=4 SV=1)

HSP 1 Score: 742.3 bits (1915), Expect = 1.6e-210
Identity = 412/613 (67.21%), Postives = 475/613 (77.49%), Query Frame = 0


Query: 2   EFSEYTRIVFNRISKIDPENVRKIVGFLLLHDHVDQEMARLALGPDQYILDVVYLAKTEL 61
           EFSE TRIV NRIS+IDPENVRKI+GFLLLHDH DQEMARLALGPD Y+L VV+L KTEL
Sbjct: 14  EFSECTRIVHNRISRIDPENVRKIIGFLLLHDHGDQEMARLALGPDHYMLQVVHLVKTEL 73

Query: 62  HILALRSMQLSTVS-------------SP--------GAFVPLARNRQQ-FPSSDNFHAP 121
           H++ALRSM LS ++             SP        G F+P A +R + FPSS     P
Sbjct: 74  HLIALRSMPLSMLTPETPLALPPSPPPSPPLSRSLPTGGFIPFALSRNRLFPSS-----P 133

Query: 122 STWDQHLTNKRSSDYIPLGCTDSMYEVQNPAQYFSLDEHIESPNSGLSGFDCSYADNAAM 181
           ST  Q LT+K + D+I L  TDSMYE+QNPAQ+FSLD+H+E PNSGLSG+DCSY D+A +
Sbjct: 134 ST-PQQLTDKPTPDFITLSYTDSMYELQNPAQFFSLDDHVEPPNSGLSGYDCSYVDHAGL 193

Query: 182 VNSLMSSTRTARHYSTVSEVQTNKICHYYNKGFCKHGNSCRYVHSNLIPDTFSQLYNTNS 241
           VN+L + T TARHYSTV E    KICHYYNKG+CKHG  CRY+H+N I ++ SQ+YN NS
Sbjct: 194 VNNLSTRT-TARHYSTVPEYHP-KICHYYNKGYCKHGYGCRYLHTNPIFESVSQVYNGNS 253

Query: 242 VNDDHVFRPGSLEKLEFEIVELLKSRRGTPISIASLPMIYYEKYGKVLQAEGYLTESQRH 301
           VN+DHVFRPGSLEKLEFEIVELLKSRRG PISIASLPMIYYE YGKVLQAEGYLTESQRH
Sbjct: 254 VNEDHVFRPGSLEKLEFEIVELLKSRRGNPISIASLPMIYYENYGKVLQAEGYLTESQRH 313

Query: 302 GKSGFSLTKLLTRLKSSIQVIDRPHGQHAVILAEDASKFIDHRNEKND---PGPIVSSAR 361
           GKSGFSLTKLLTRLK SIQVIDRPHGQHAVILAEDA +FIDHR EKND    GPIVSSAR
Sbjct: 314 GKSGFSLTKLLTRLK-SIQVIDRPHGQHAVILAEDAPRFIDHRTEKNDHGPHGPIVSSAR 373

Query: 362 QIYLTFPADSTFTENDVADYFSDHYGLVEDVRIPCQQRRMFGFVTFHSIETVKLILSQDS 421
           QIYLTFPADS FTE+DV+DYFSD YGLVEDVRIPCQQ+RMFGFVTF++IETV LILSQD+
Sbjct: 374 QIYLTFPADSNFTEDDVSDYFSDQYGLVEDVRIPCQQKRMFGFVTFYNIETVNLILSQDN 433

Query: 422 EHLICGARVLVKPYREKSKLLERKFQEKFEQQQHQQTYYSPHYNDLEAEQQLHSIPRGYE 481
           EHLICGARVLVKPYREKSK L+R+ QEK EQ   Q+ YY+ HYN+    +QLHS   GYE
Sbjct: 434 EHLICGARVLVKPYREKSK-LDRRNQEKIEQ---QKLYYASHYNNSLETEQLHS---GYE 493

Query: 482 ASRLLRLRLE--------EEEQQQQQALEVERRLSEMSLMQKSVLNQPYFSYQMKELKVP 541
            SR+  LR+E        +++QQQQQA EVERRLSEM+LM KSV+NQPYFSYQMK+L VP
Sbjct: 494 DSRMFNLRIEQQQQQQQQQQQQQQQQAYEVERRLSEMNLMVKSVMNQPYFSYQMKQLDVP 553

Query: 542 EEHFSFPTTDRFDHLLEVLKSGSGSRS----------GSLSDDNINKPPRNPTDWNHPNL 572
           E+HFSFP  +R D+LL+ LK+G+G+ +          G+ S  + NKP     DWN    
Sbjct: 554 EDHFSFPIAERLDNLLDALKTGAGASASASASANAGVGAGSSGHNNKPAE--ADWN---- 603

[Close]

BLAST of Lcy11g015450 vs. ExPASy TrEMBL
Match: A0A6J1F359 (zinc finger CCCH domain-containing protein 18-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111440872 PE=4 SV=1)

HSP 1 Score: 739.6 bits (1908), Expect = 1.0e-209
Identity = 411/611 (67.27%), Postives = 472/611 (77.25%), Query Frame = 0


Query: 2   EFSEYTRIVFNRISKIDPENVRKIVGFLLLHDHVDQEMARLALGPDQYILDVVYLAKTEL 61
           EFSE TRIV NRIS+IDPENVRKI+GFLLLHDH DQEMARLALGPD Y+L VV+L KTEL
Sbjct: 14  EFSECTRIVHNRISRIDPENVRKIIGFLLLHDHGDQEMARLALGPDHYMLQVVHLVKTEL 73

Query: 62  HILALRSM---------------------QLSTVSSPGAFVPLARNRQQ-FPSSDNFHAP 121
           H++ALRSM                      LST  S G FVP A +R + FPSS     P
Sbjct: 74  HLIALRSMPLSMLTPDTPLALPSPPPPSPPLSTSLSMGGFVPFALSRNRLFPSS-----P 133

Query: 122 STWDQHLTNKRSSDYIPLGCTDSMYEVQNPAQYFSLDEHIESPNSGLSGFDCSYADNAAM 181
           ST  Q LT+K + D+I L  TDSMYE+QNPAQ+FSLD+H+E PNSGLSG+DCSY D+A +
Sbjct: 134 ST-PQQLTDKPTPDFITLSYTDSMYELQNPAQFFSLDDHVEPPNSGLSGYDCSYVDHAGL 193

Query: 182 VNSLMSSTRTARHYSTVSEVQTNKICHYYNKGFCKHGNSCRYVHSNLIPDTFSQLYNTNS 241
           VN+L + T TARHYSTV E    KICHYYNKG+CKHG  CRY+H+N I ++ SQ+YN NS
Sbjct: 194 VNNLSTRT-TARHYSTVPEYHP-KICHYYNKGYCKHGYGCRYLHTNPIFESVSQVYNGNS 253

Query: 242 VNDDHVFRPGSLEKLEFEIVELLKSRRGTPISIASLPMIYYEKYGKVLQAEGYLTESQRH 301
           VN+DHVFRPGSLEKLEFEIVELLKSRRG PISIASLPMIYYE YGKVLQAEGYLTESQRH
Sbjct: 254 VNEDHVFRPGSLEKLEFEIVELLKSRRGNPISIASLPMIYYENYGKVLQAEGYLTESQRH 313

Query: 302 GKSGFSLTKLLTRLKSSIQVIDRPHGQHAVILAEDASKFIDHRNEKND---PGPIVSSAR 361
           GKSGFSLTKLLTRLK SIQVIDRPHGQHAVILAEDA +FIDHR EKND    GPIVSSAR
Sbjct: 314 GKSGFSLTKLLTRLK-SIQVIDRPHGQHAVILAEDAPRFIDHRTEKNDHGPHGPIVSSAR 373

Query: 362 QIYLTFPADSTFTENDVADYFSDHYGLVEDVRIPCQQRRMFGFVTFHSIETVKLILSQDS 421
           QIYLTFPADS FTE+DV+DYFSD YGLVEDVRIPCQQ+RMFGFVTF++IETV LILSQD+
Sbjct: 374 QIYLTFPADSNFTEDDVSDYFSDQYGLVEDVRIPCQQKRMFGFVTFYNIETVNLILSQDN 433

Query: 422 EHLICGARVLVKPYREKSKLLERKFQEKFEQQQHQQTYYSPHYNDLEAEQQLHSIPRGYE 481
           EHLICGARVLVKPYREKSK L+R+ QEK EQ   Q+ YY+ +YN+    +QLHS    YE
Sbjct: 434 EHLICGARVLVKPYREKSK-LDRRNQEKIEQ---QKLYYASYYNNSLETEQLHS---SYE 493

Query: 482 ASRLLRLRLE--------EEEQQQQQALEVERRLSEMSLMQKSVLNQPYFSYQMKELKVP 541
            SR+  LR+E        +++QQQQQA EVERRLSEM+LM KSV+NQPYFSYQMK+L VP
Sbjct: 494 DSRMFSLRIEQHQQHQQQQQQQQQQQAYEVERRLSEMNLMVKSVMNQPYFSYQMKQLDVP 553

Query: 542 EEHFSFPTTDRFDHLLEVLKSGSGSRSGSL--------SDDNINKPPRNPTDWNHPNLEH 572
           E+HFSFP  +R D+LL+ LK+G+G+ +G+         S  + NKP     DWN     H
Sbjct: 554 EDHFSFPIAERLDNLLDALKTGAGAGAGASASAGAGAGSSGHNNKPAE--ADWN-----H 601

[Close]

BLAST of Lcy11g015450 vs. ExPASy TrEMBL
Match: A0A6J1F075 (zinc finger CCCH domain-containing protein 18-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111440872 PE=4 SV=1)

HSP 1 Score: 734.6 bits (1895), Expect = 3.3e-208
Identity = 411/624 (65.87%), Postives = 472/624 (75.64%), Query Frame = 0


Query: 2   EFSEYTRIVFNRISKIDPENVRKIVGFLLLHDHVDQEMARLALGPDQYILDVVYLAKTEL 61
           EFSE TRIV NRIS+IDPENVRKI+GFLLLHDH DQEMARLALGPD Y+L VV+L KTEL
Sbjct: 14  EFSECTRIVHNRISRIDPENVRKIIGFLLLHDHGDQEMARLALGPDHYMLQVVHLVKTEL 73

Query: 62  HILALRSM---------------------QLSTVSSPGAFVPLARNRQQ-FPSSDNFHAP 121
           H++ALRSM                      LST  S G FVP A +R + FPSS     P
Sbjct: 74  HLIALRSMPLSMLTPDTPLALPSPPPPSPPLSTSLSMGGFVPFALSRNRLFPSS-----P 133

Query: 122 STWDQHLTNKRSSDYIPLGCTDSMYEVQNPAQYFSLDEHIESPNSGLSGFDCSYADNAAM 181
           ST  Q LT+K + D+I L  TDSMYE+QNPAQ+FSLD+H+E PNSGLSG+DCSY D+A +
Sbjct: 134 ST-PQQLTDKPTPDFITLSYTDSMYELQNPAQFFSLDDHVEPPNSGLSGYDCSYVDHAGL 193

Query: 182 VNSLMSSTRTARHYSTVSEVQTNKICHYYNKGFCKHGNSCRYVHSNLIPDTFSQLYNTNS 241
           VN+L + T TARHYSTV E    KICHYYNKG+CKHG  CRY+H+N I ++ SQ+YN NS
Sbjct: 194 VNNLSTRT-TARHYSTVPEYHP-KICHYYNKGYCKHGYGCRYLHTNPIFESVSQVYNGNS 253

Query: 242 VNDDHVFRPGSLEKLEFEIVELLKSRRGTPISIASLPMIYYEKYGKVLQAEGYLTESQRH 301
           VN+DHVFRPGSLEKLEFEIVELLKSRRG PISIASLPMIYYE YGKVLQAEGYLTESQRH
Sbjct: 254 VNEDHVFRPGSLEKLEFEIVELLKSRRGNPISIASLPMIYYENYGKVLQAEGYLTESQRH 313

Query: 302 GKSGFSLTKLLTRLKSSIQVIDRPHGQHAVILAEDASKFIDHRNEKND---PGPIVSSAR 361
           GKSGFSLTKLLTRLK SIQVIDRPHGQHAVILAEDA +FIDHR EKND    GPIVSSAR
Sbjct: 314 GKSGFSLTKLLTRLK-SIQVIDRPHGQHAVILAEDAPRFIDHRTEKNDHGPHGPIVSSAR 373

Query: 362 QIYLTFPADSTFTENDVADYFSDHYGLVEDVRIPCQQRRMFGFVTFHSIETVKLILSQDS 421
           QIYLTFPADS FTE+DV+DYFSD YGLVEDVRIPCQQ+RMFGFVTF++IETV LILSQD+
Sbjct: 374 QIYLTFPADSNFTEDDVSDYFSDQYGLVEDVRIPCQQKRMFGFVTFYNIETVNLILSQDN 433

Query: 422 EHLICGARVLVKPYREKSKLLERKFQEKFEQQQHQQTYYSPHYNDLEAEQQLHSIPRGYE 481
           EHLICGARVLVKPYREKSK L+R+ QEK EQ   Q+ YY+ +YN+    +QLHS    YE
Sbjct: 434 EHLICGARVLVKPYREKSK-LDRRNQEKIEQ---QKLYYASYYNNSLETEQLHS---SYE 493

Query: 482 ASRLLRLRLE---------------------EEEQQQQQALEVERRLSEMSLMQKSVLNQ 541
            SR+  LR+E                     +++QQQQQA EVERRLSEM+LM KSV+NQ
Sbjct: 494 DSRMFSLRIEQQQQQHQQQQQHQQHQQHQQQQQQQQQQQAYEVERRLSEMNLMVKSVMNQ 553

Query: 542 PYFSYQMKELKVPEEHFSFPTTDRFDHLLEVLKSGSGSRSGSL--------SDDNINKPP 572
           PYFSYQMK+L VPE+HFSFP  +R D+LL+ LK+G+G+ +G+         S  + NKP 
Sbjct: 554 PYFSYQMKQLDVPEDHFSFPIAERLDNLLDALKTGAGAGAGASASAGAGAGSSGHNNKPA 613

[Close]

BLAST of Lcy11g015450 vs. ExPASy TrEMBL
Match: A0A0A0L4W6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G061520 PE=4 SV=1)

HSP 1 Score: 722.2 bits (1863), Expect = 1.7e-204
Identity = 402/579 (69.43%), Postives = 459/579 (79.27%), Query Frame = 0


Query: 1   MEFSEYTRIVFNRISKIDPENVRKIVGFLLLHDHVDQEMARLALGPDQYILDVVYLAKTE 60
           MEFS +TR VF+RI++IDP+NV KI+GFLLLHD+ DQEMARLAL  + +I  VV LAKTE
Sbjct: 36  MEFSAHTRTVFHRINQIDPDNVMKIIGFLLLHDNGDQEMARLALANESHIEKVVMLAKTE 95

Query: 61  LHILALRSMQLSTVSSPGAFVPLA-RNRQQFPSSDNFHAPSTWD-QHLTNKRSSDYIPLG 120
           LH   LRSM       P    PLA RNRQ  PS+    +P  W+ Q LTNK + DYI LG
Sbjct: 96  LH--QLRSM-------PVPVSPLAIRNRQ--PST----SPPGWEQQQLTNKHTPDYISLG 155

Query: 121 CTD-SMYEVQNPAQYFSLDEHIESPNSGLSGFDCSYADNAAMVNSLMSSTRTARHYSTVS 180
             D SMY++QN A  F L++H+E  NSGLS FDCSYADN  M+NS   STR  RHYS V 
Sbjct: 156 YHDSSMYDLQNAANLFCLEDHMEQSNSGLSSFDCSYADN--MLNSF--STRNTRHYSNVP 215

Query: 181 EVQTNKICHYYNKGFCKHGNSCRYVHSNLIPDTFSQLYNTNS-VNDDHVFRPGSLEKLEF 240
           + Q  + CHYYNKGFCKHGNSCRY+HSNL+P + S LYNTNS VNDDHVFRPGSLE+LEF
Sbjct: 216 DFQP-RTCHYYNKGFCKHGNSCRYLHSNLVPGSLSHLYNTNSNVNDDHVFRPGSLERLEF 275

Query: 241 EIVELLKSRRGTPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKSS 300
           EIVELLKSRRG+PISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLK+S
Sbjct: 276 EIVELLKSRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKNS 335

Query: 301 IQVIDRPHGQHAVILAEDASKFIDHRNEKNDPGPIVSSARQIYLTFPADSTFTENDVADY 360
           IQVIDRPHGQHAVILAEDA KF+DHR ++NDPGPIVSSARQIY+TFPADSTFTE+DV+DY
Sbjct: 336 IQVIDRPHGQHAVILAEDAPKFMDHRKDRNDPGPIVSSARQIYMTFPADSTFTEDDVSDY 395

Query: 361 FSDHYGLVEDVRIPCQQRRMFGFVTFHSIETVKLILSQDSEHLICGARVLVKPYREKSKL 420
           FS HYG+VEDVRIPCQQRRMFGFVTFHS+ETVKLILS DSEHLICGARVLVKPYREKSKL
Sbjct: 396 FSVHYGMVEDVRIPCQQRRMFGFVTFHSMETVKLILSDDSEHLICGARVLVKPYREKSKL 455

Query: 421 LERKFQEKFEQQQHQQTYYSPHYNDLEAEQQLHSIPRGYE-ASRLLRLRLEEEEQQQQQA 480
           LERK+QE+ EQQ   Q Y++ HYN LE+E QLHSI RGY+    +LRLR+EE++QQQ+  
Sbjct: 456 LERKYQERIEQQ--HQDYFASHYNSLESE-QLHSIGRGYDFPPTMLRLRMEEQQQQQR-- 515

Query: 481 LEVERRLSEMSLMQKSVLNQPYFSYQMKELKVPEEHFSFPTTDRFDHL---LEVLKSGSG 540
            E+ER LSEM+L+QKSV+NQPYFSYQM ELKVP        T+ F+HL   L VL SGS 
Sbjct: 516 -ELERSLSEMTLVQKSVVNQPYFSYQMNELKVPVPE----ATESFEHLMDILNVLNSGSN 575

Query: 541 SRSGSLSDDNINKPPRNPTDWNHPNLEHLELDLDSLSRN 572
           S S S  D+     P+N TDWN     H+EL+L+S   N
Sbjct: 576 SSSSSTDDNKQQPHPQNVTDWN-----HMELNLESEGYN 579

[Close]

BLAST of Lcy11g015450 vs. ExPASy TrEMBL
Match: A0A5A7VHD9 (Zinc finger CCCH domain-containing protein 18-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37G00570 PE=4 SV=1)

HSP 1 Score: 706.4 bits (1822), Expect = 9.8e-200
Identity = 396/574 (68.99%), Postives = 452/574 (78.75%), Query Frame = 0


Query: 1   MEFSEYTRIVFNRISKIDPENVRKIVGFLLLHDHVDQEMARLALGPDQYILDVVYLAKTE 60
           MEFS +T+ VF+RI +IDP+NV KI+GFLLLHD  DQEMARLAL  + +I  VV LAKTE
Sbjct: 1   MEFSGHTKTVFHRIRQIDPDNVMKIIGFLLLHDDGDQEMARLALAHESHIEKVVMLAKTE 60

Query: 61  LHILALRSMQLSTVSSPGAFVPLA-RNRQQFPSSDNFHAPSTWD-QHLTNKRSSDYIPLG 120
           LH    RSM       P    PLA RNRQ   S      P  W+ Q LTNK + DYIPLG
Sbjct: 61  LH--QRRSM-------PVPVSPLAIRNRQSSTS------PPGWEQQQLTNKHTPDYIPLG 120

Query: 121 CTDSMYEVQNPAQYFSLDEHIESPNSGLSGFDCSYADNAAMVNSLMSSTRTARHYSTVSE 180
             DSMY++QN    F L++H+E     LS FDCSYA+N  ++NS   STR  RHYS V +
Sbjct: 121 YHDSMYDIQNSVNLFCLEDHLE---QSLSSFDCSYAEN--VMNSF--STRNTRHYSNVPD 180

Query: 181 VQTNKICHYYNKGFCKHGNSCRYVHS-NLIPDTFSQLYNTNS-VNDDHVFRPGSLEKLEF 240
            Q  + CHYYNKGFCKHGNSCRY+HS NL+P + S LYN+NS VNDDHVFRPGSLE+LEF
Sbjct: 181 FQP-RTCHYYNKGFCKHGNSCRYLHSNNLLPGSLSHLYNSNSNVNDDHVFRPGSLERLEF 240

Query: 241 EIVELLKSRRGTPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKSS 300
           EIVELLKSRRG+PISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKSS
Sbjct: 241 EIVELLKSRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKSS 300

Query: 301 IQVIDRPHGQHAVILAEDASKFIDHRNEKNDPGPIVSSARQIYLTFPADSTFTENDVADY 360
           IQVIDRPHGQHAVILAEDA KF+DHR ++NDPG IVSSARQIY+TFPADSTFTE+DV+DY
Sbjct: 301 IQVIDRPHGQHAVILAEDAPKFMDHRKDRNDPGSIVSSARQIYMTFPADSTFTEDDVSDY 360

Query: 361 FSDHYGLVEDVRIPCQQRRMFGFVTFHSIETVKLILSQDSEHLICGARVLVKPYREKSKL 420
           FS HYG+VEDVRIPCQQRRMFGFVTFHSIETVKLILS DSEHLICGARVLVKPYREKSKL
Sbjct: 361 FSVHYGMVEDVRIPCQQRRMFGFVTFHSIETVKLILSDDSEHLICGARVLVKPYREKSKL 420

Query: 421 LERKFQEKFEQQQHQQTYYSPHYNDLEAEQQLHSIPRGYE-ASRLLRLRLEEEEQQQQQA 480
           LERK+QE+ EQ   QQ Y++PHYN+LE+E QLHSI RGY+    +LRLR+EE++QQQQ+A
Sbjct: 421 LERKYQERIEQ---QQDYFAPHYNNLESE-QLHSIARGYDFPPTMLRLRMEEQQQQQQRA 480

Query: 481 LEVERRLSEMSLMQKSVLNQPYFSYQMKELKVPEEHFSFPTTDRFDHL---LEVLKSGSG 540
           L  ER LSEM+L+QKSV+NQPYFSYQM ELK+P        T+ FDHL   L VL SG+ 
Sbjct: 481 L--ERSLSEMTLVQKSVVNQPYFSYQMNELKLPVPE----DTESFDHLMDILNVLNSGTN 535

Query: 541 SRSGSLSDDNINKPPRNPTDWNHPNLEHLELDLD 567
           S S S +DDN    P+N TDWN     H+EL+L+
Sbjct: 541 SSSSS-TDDNKQPQPQNMTDWN-----HIELNLE 535

[Close]

BLAST of Lcy11g015450 vs. NCBI nr
Match: XP_023005335.1 (zinc finger CCCH domain-containing protein 18-like [Cucurbita maxima])

HSP 1 Score: 742.3 bits (1915), Expect = 3.3e-210
Identity = 412/613 (67.21%), Postives = 475/613 (77.49%), Query Frame = 0


Query: 2   EFSEYTRIVFNRISKIDPENVRKIVGFLLLHDHVDQEMARLALGPDQYILDVVYLAKTEL 61
           EFSE TRIV NRIS+IDPENVRKI+GFLLLHDH DQEMARLALGPD Y+L VV+L KTEL
Sbjct: 14  EFSECTRIVHNRISRIDPENVRKIIGFLLLHDHGDQEMARLALGPDHYMLQVVHLVKTEL 73

Query: 62  HILALRSMQLSTVS-------------SP--------GAFVPLARNRQQ-FPSSDNFHAP 121
           H++ALRSM LS ++             SP        G F+P A +R + FPSS     P
Sbjct: 74  HLIALRSMPLSMLTPETPLALPPSPPPSPPLSRSLPTGGFIPFALSRNRLFPSS-----P 133

Query: 122 STWDQHLTNKRSSDYIPLGCTDSMYEVQNPAQYFSLDEHIESPNSGLSGFDCSYADNAAM 181
           ST  Q LT+K + D+I L  TDSMYE+QNPAQ+FSLD+H+E PNSGLSG+DCSY D+A +
Sbjct: 134 ST-PQQLTDKPTPDFITLSYTDSMYELQNPAQFFSLDDHVEPPNSGLSGYDCSYVDHAGL 193

Query: 182 VNSLMSSTRTARHYSTVSEVQTNKICHYYNKGFCKHGNSCRYVHSNLIPDTFSQLYNTNS 241
           VN+L + T TARHYSTV E    KICHYYNKG+CKHG  CRY+H+N I ++ SQ+YN NS
Sbjct: 194 VNNLSTRT-TARHYSTVPEYHP-KICHYYNKGYCKHGYGCRYLHTNPIFESVSQVYNGNS 253

Query: 242 VNDDHVFRPGSLEKLEFEIVELLKSRRGTPISIASLPMIYYEKYGKVLQAEGYLTESQRH 301
           VN+DHVFRPGSLEKLEFEIVELLKSRRG PISIASLPMIYYE YGKVLQAEGYLTESQRH
Sbjct: 254 VNEDHVFRPGSLEKLEFEIVELLKSRRGNPISIASLPMIYYENYGKVLQAEGYLTESQRH 313

Query: 302 GKSGFSLTKLLTRLKSSIQVIDRPHGQHAVILAEDASKFIDHRNEKND---PGPIVSSAR 361
           GKSGFSLTKLLTRLK SIQVIDRPHGQHAVILAEDA +FIDHR EKND    GPIVSSAR
Sbjct: 314 GKSGFSLTKLLTRLK-SIQVIDRPHGQHAVILAEDAPRFIDHRTEKNDHGPHGPIVSSAR 373

Query: 362 QIYLTFPADSTFTENDVADYFSDHYGLVEDVRIPCQQRRMFGFVTFHSIETVKLILSQDS 421
           QIYLTFPADS FTE+DV+DYFSD YGLVEDVRIPCQQ+RMFGFVTF++IETV LILSQD+
Sbjct: 374 QIYLTFPADSNFTEDDVSDYFSDQYGLVEDVRIPCQQKRMFGFVTFYNIETVNLILSQDN 433

Query: 422 EHLICGARVLVKPYREKSKLLERKFQEKFEQQQHQQTYYSPHYNDLEAEQQLHSIPRGYE 481
           EHLICGARVLVKPYREKSK L+R+ QEK EQ   Q+ YY+ HYN+    +QLHS   GYE
Sbjct: 434 EHLICGARVLVKPYREKSK-LDRRNQEKIEQ---QKLYYASHYNNSLETEQLHS---GYE 493

Query: 482 ASRLLRLRLE--------EEEQQQQQALEVERRLSEMSLMQKSVLNQPYFSYQMKELKVP 541
            SR+  LR+E        +++QQQQQA EVERRLSEM+LM KSV+NQPYFSYQMK+L VP
Sbjct: 494 DSRMFNLRIEQQQQQQQQQQQQQQQQAYEVERRLSEMNLMVKSVMNQPYFSYQMKQLDVP 553

Query: 542 EEHFSFPTTDRFDHLLEVLKSGSGSRS----------GSLSDDNINKPPRNPTDWNHPNL 572
           E+HFSFP  +R D+LL+ LK+G+G+ +          G+ S  + NKP     DWN    
Sbjct: 554 EDHFSFPIAERLDNLLDALKTGAGASASASASANAGVGAGSSGHNNKPAE--ADWN---- 603

[Close]

BLAST of Lcy11g015450 vs. NCBI nr
Match: XP_022934572.1 (zinc finger CCCH domain-containing protein 18-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 739.6 bits (1908), Expect = 2.1e-209
Identity = 411/611 (67.27%), Postives = 472/611 (77.25%), Query Frame = 0


Query: 2   EFSEYTRIVFNRISKIDPENVRKIVGFLLLHDHVDQEMARLALGPDQYILDVVYLAKTEL 61
           EFSE TRIV NRIS+IDPENVRKI+GFLLLHDH DQEMARLALGPD Y+L VV+L KTEL
Sbjct: 14  EFSECTRIVHNRISRIDPENVRKIIGFLLLHDHGDQEMARLALGPDHYMLQVVHLVKTEL 73

Query: 62  HILALRSM---------------------QLSTVSSPGAFVPLARNRQQ-FPSSDNFHAP 121
           H++ALRSM                      LST  S G FVP A +R + FPSS     P
Sbjct: 74  HLIALRSMPLSMLTPDTPLALPSPPPPSPPLSTSLSMGGFVPFALSRNRLFPSS-----P 133

Query: 122 STWDQHLTNKRSSDYIPLGCTDSMYEVQNPAQYFSLDEHIESPNSGLSGFDCSYADNAAM 181
           ST  Q LT+K + D+I L  TDSMYE+QNPAQ+FSLD+H+E PNSGLSG+DCSY D+A +
Sbjct: 134 ST-PQQLTDKPTPDFITLSYTDSMYELQNPAQFFSLDDHVEPPNSGLSGYDCSYVDHAGL 193

Query: 182 VNSLMSSTRTARHYSTVSEVQTNKICHYYNKGFCKHGNSCRYVHSNLIPDTFSQLYNTNS 241
           VN+L + T TARHYSTV E    KICHYYNKG+CKHG  CRY+H+N I ++ SQ+YN NS
Sbjct: 194 VNNLSTRT-TARHYSTVPEYHP-KICHYYNKGYCKHGYGCRYLHTNPIFESVSQVYNGNS 253

Query: 242 VNDDHVFRPGSLEKLEFEIVELLKSRRGTPISIASLPMIYYEKYGKVLQAEGYLTESQRH 301
           VN+DHVFRPGSLEKLEFEIVELLKSRRG PISIASLPMIYYE YGKVLQAEGYLTESQRH
Sbjct: 254 VNEDHVFRPGSLEKLEFEIVELLKSRRGNPISIASLPMIYYENYGKVLQAEGYLTESQRH 313

Query: 302 GKSGFSLTKLLTRLKSSIQVIDRPHGQHAVILAEDASKFIDHRNEKND---PGPIVSSAR 361
           GKSGFSLTKLLTRLK SIQVIDRPHGQHAVILAEDA +FIDHR EKND    GPIVSSAR
Sbjct: 314 GKSGFSLTKLLTRLK-SIQVIDRPHGQHAVILAEDAPRFIDHRTEKNDHGPHGPIVSSAR 373

Query: 362 QIYLTFPADSTFTENDVADYFSDHYGLVEDVRIPCQQRRMFGFVTFHSIETVKLILSQDS 421
           QIYLTFPADS FTE+DV+DYFSD YGLVEDVRIPCQQ+RMFGFVTF++IETV LILSQD+
Sbjct: 374 QIYLTFPADSNFTEDDVSDYFSDQYGLVEDVRIPCQQKRMFGFVTFYNIETVNLILSQDN 433

Query: 422 EHLICGARVLVKPYREKSKLLERKFQEKFEQQQHQQTYYSPHYNDLEAEQQLHSIPRGYE 481
           EHLICGARVLVKPYREKSK L+R+ QEK EQ   Q+ YY+ +YN+    +QLHS    YE
Sbjct: 434 EHLICGARVLVKPYREKSK-LDRRNQEKIEQ---QKLYYASYYNNSLETEQLHS---SYE 493

Query: 482 ASRLLRLRLE--------EEEQQQQQALEVERRLSEMSLMQKSVLNQPYFSYQMKELKVP 541
            SR+  LR+E        +++QQQQQA EVERRLSEM+LM KSV+NQPYFSYQMK+L VP
Sbjct: 494 DSRMFSLRIEQHQQHQQQQQQQQQQQAYEVERRLSEMNLMVKSVMNQPYFSYQMKQLDVP 553

Query: 542 EEHFSFPTTDRFDHLLEVLKSGSGSRSGSL--------SDDNINKPPRNPTDWNHPNLEH 572
           E+HFSFP  +R D+LL+ LK+G+G+ +G+         S  + NKP     DWN     H
Sbjct: 554 EDHFSFPIAERLDNLLDALKTGAGAGAGASASAGAGAGSSGHNNKPAE--ADWN-----H 601

[Close]

BLAST of Lcy11g015450 vs. NCBI nr
Match: XP_038905763.1 (zinc finger CCCH domain-containing protein 18-like isoform X1 [Benincasa hispida])

HSP 1 Score: 739.2 bits (1907), Expect = 2.8e-209
Identity = 408/582 (70.10%), Postives = 459/582 (78.87%), Query Frame = 0


Query: 1   MEFSEYTRIVFNRISKIDPENVRKIVGFLLLHDHVDQEMARLALGPDQYILDVVYLAKTE 60
           MEFS+YTR+VF+RISKIDPENV+KI+GFLLLHDH DQEMARLALGPD +I +V+ LAK E
Sbjct: 14  MEFSDYTRVVFHRISKIDPENVKKIIGFLLLHDHGDQEMARLALGPDSHIQEVIMLAKNE 73

Query: 61  LHILALRSMQL-----STVSSPGAFVPLARNRQQFPSSDNFHAPSTWDQ-HLTNKRSSDY 120
           LH   LRSM       S   S G F+  A   +QF +S     P  W+Q  LTNK + DY
Sbjct: 74  LH--QLRSMPAPVSPPSLSPSHGGFISSAIRNRQFSTS-----PPGWEQPQLTNKPTPDY 133

Query: 121 IPLGCTDSMYEVQNPAQYFSLDEHIESPNSGLSGFDCSYADNAAMVNSLMSSTRTARHYS 180
           IPL  +DSMYE+ NP  +F LD+H+E  NSGLS FDC Y +NAAMVNS +  TR  RHYS
Sbjct: 134 IPLSYSDSMYELHNP-HFFCLDDHMEPSNSGLSSFDCRYVENAAMVNSFI--TRNTRHYS 193

Query: 181 TVSEVQTNKICHYYNKGFCKHGNSCRYVHSNLIPDTFSQLYNTNS-VNDDHVFRPGSLEK 240
            V E Q  + CHY+NKGFCKHG+SCRY+HS         LYN+NS VNDDHVFRPGSLE+
Sbjct: 194 NVPEFQP-RTCHYFNKGFCKHGSSCRYLHS-------GSLYNSNSNVNDDHVFRPGSLER 253

Query: 241 LEFEIVELLKSRRGTPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRL 300
           LEFEIVELLKSRRG+PISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRL
Sbjct: 254 LEFEIVELLKSRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRL 313

Query: 301 KSSIQVIDRPHGQHAVILAEDASKFIDHRNEKNDPGPIVSSARQIYLTFPADSTFTENDV 360
           KSSIQVIDRPHGQHAVILAEDA KF+DHR +KNDPGPIVSSARQIY+TFPADSTFTE+DV
Sbjct: 314 KSSIQVIDRPHGQHAVILAEDAPKFMDHRKDKNDPGPIVSSARQIYMTFPADSTFTEDDV 373

Query: 361 ADYFSDHYGLVEDVRIPCQQRRMFGFVTFHSIETVKLILSQDSEHLICGARVLVKPYREK 420
           +DYFS HYGLVEDVRIPCQQRRMFGFVTFHSIETVKLILS DSEHLICGARVLVKPYREK
Sbjct: 374 SDYFSVHYGLVEDVRIPCQQRRMFGFVTFHSIETVKLILSDDSEHLICGARVLVKPYREK 433

Query: 421 SKLLERKFQEKFEQQQHQQTYYSPHYNDLEAEQQLHSIPRGYEAS-RLLRLRLEEEEQQQ 480
           SKLLERK+QE+ EQQ   Q Y+S  YN+LE E QLH I RGY+ S  +LRLR+EE++Q+Q
Sbjct: 434 SKLLERKYQERIEQQ--NQDYFSSRYNNLEPE-QLHLIARGYDFSPTMLRLRMEEQQQRQ 493

Query: 481 QQALEVERRLSEMSLMQKSVLNQPYFSYQMKELKVPEEHFSFPTTDRFDHL---LEVLKS 540
           QQ   +ER LSEM+L+QKSV+NQPYFSYQM ELK+P         +RFDHL   L VLKS
Sbjct: 494 QQQHALERSLSEMTLIQKSVVNQPYFSYQMNELKLPVPE------ERFDHLMDILNVLKS 553

Query: 541 GSGSRSGSLSDDNINKPPRNPTDWNHPNLEHLELDLDSLSRN 572
           GSGS S S S  + NK PRN  DWN     H+EL+L S   N
Sbjct: 554 GSGSSSSSSSITDENKQPRNVIDWN-----HIELNLKSEGYN 563

[Close]

BLAST of Lcy11g015450 vs. NCBI nr
Match: XP_038905764.1 (zinc finger CCCH domain-containing protein 18-like isoform X2 [Benincasa hispida])

HSP 1 Score: 739.2 bits (1907), Expect = 2.8e-209
Identity = 408/582 (70.10%), Postives = 459/582 (78.87%), Query Frame = 0


Query: 1   MEFSEYTRIVFNRISKIDPENVRKIVGFLLLHDHVDQEMARLALGPDQYILDVVYLAKTE 60
           MEFS+YTR+VF+RISKIDPENV+KI+GFLLLHDH DQEMARLALGPD +I +V+ LAK E
Sbjct: 3   MEFSDYTRVVFHRISKIDPENVKKIIGFLLLHDHGDQEMARLALGPDSHIQEVIMLAKNE 62

Query: 61  LHILALRSMQL-----STVSSPGAFVPLARNRQQFPSSDNFHAPSTWDQ-HLTNKRSSDY 120
           LH   LRSM       S   S G F+  A   +QF +S     P  W+Q  LTNK + DY
Sbjct: 63  LH--QLRSMPAPVSPPSLSPSHGGFISSAIRNRQFSTS-----PPGWEQPQLTNKPTPDY 122

Query: 121 IPLGCTDSMYEVQNPAQYFSLDEHIESPNSGLSGFDCSYADNAAMVNSLMSSTRTARHYS 180
           IPL  +DSMYE+ NP  +F LD+H+E  NSGLS FDC Y +NAAMVNS +  TR  RHYS
Sbjct: 123 IPLSYSDSMYELHNP-HFFCLDDHMEPSNSGLSSFDCRYVENAAMVNSFI--TRNTRHYS 182

Query: 181 TVSEVQTNKICHYYNKGFCKHGNSCRYVHSNLIPDTFSQLYNTNS-VNDDHVFRPGSLEK 240
            V E Q  + CHY+NKGFCKHG+SCRY+HS         LYN+NS VNDDHVFRPGSLE+
Sbjct: 183 NVPEFQP-RTCHYFNKGFCKHGSSCRYLHS-------GSLYNSNSNVNDDHVFRPGSLER 242

Query: 241 LEFEIVELLKSRRGTPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRL 300
           LEFEIVELLKSRRG+PISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRL
Sbjct: 243 LEFEIVELLKSRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRL 302

Query: 301 KSSIQVIDRPHGQHAVILAEDASKFIDHRNEKNDPGPIVSSARQIYLTFPADSTFTENDV 360
           KSSIQVIDRPHGQHAVILAEDA KF+DHR +KNDPGPIVSSARQIY+TFPADSTFTE+DV
Sbjct: 303 KSSIQVIDRPHGQHAVILAEDAPKFMDHRKDKNDPGPIVSSARQIYMTFPADSTFTEDDV 362

Query: 361 ADYFSDHYGLVEDVRIPCQQRRMFGFVTFHSIETVKLILSQDSEHLICGARVLVKPYREK 420
           +DYFS HYGLVEDVRIPCQQRRMFGFVTFHSIETVKLILS DSEHLICGARVLVKPYREK
Sbjct: 363 SDYFSVHYGLVEDVRIPCQQRRMFGFVTFHSIETVKLILSDDSEHLICGARVLVKPYREK 422

Query: 421 SKLLERKFQEKFEQQQHQQTYYSPHYNDLEAEQQLHSIPRGYEAS-RLLRLRLEEEEQQQ 480
           SKLLERK+QE+ EQQ   Q Y+S  YN+LE E QLH I RGY+ S  +LRLR+EE++Q+Q
Sbjct: 423 SKLLERKYQERIEQQ--NQDYFSSRYNNLEPE-QLHLIARGYDFSPTMLRLRMEEQQQRQ 482

Query: 481 QQALEVERRLSEMSLMQKSVLNQPYFSYQMKELKVPEEHFSFPTTDRFDHL---LEVLKS 540
           QQ   +ER LSEM+L+QKSV+NQPYFSYQM ELK+P         +RFDHL   L VLKS
Sbjct: 483 QQQHALERSLSEMTLIQKSVVNQPYFSYQMNELKLPVPE------ERFDHLMDILNVLKS 542

Query: 541 GSGSRSGSLSDDNINKPPRNPTDWNHPNLEHLELDLDSLSRN 572
           GSGS S S S  + NK PRN  DWN     H+EL+L S   N
Sbjct: 543 GSGSSSSSSSITDENKQPRNVIDWN-----HIELNLKSEGYN 552

[Close]

BLAST of Lcy11g015450 vs. NCBI nr
Match: KAG7028283.1 (Zinc finger CCCH domain-containing protein 18 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 737.3 bits (1902), Expect = 1.1e-208
Identity = 411/616 (66.72%), Postives = 472/616 (76.62%), Query Frame = 0


Query: 2   EFSEYTRIVFNRISKIDPENVRKIVGFLLLHDHVDQEMARLALGPDQYILDVVYLAKTEL 61
           EFSE TRIV NRIS+IDPENVRKI+GFLLLHDH DQEMARLALGPD Y+L VV+L KTEL
Sbjct: 14  EFSECTRIVHNRISRIDPENVRKIIGFLLLHDHGDQEMARLALGPDHYMLQVVHLVKTEL 73

Query: 62  HILALRSMQLS--TVSSP-------------------GAFVPLARNRQQ-FPSSDNFHAP 121
           H++ALRSM LS  T  +P                   G FVP A +R + FPSS     P
Sbjct: 74  HLIALRSMPLSMLTAETPLALPSPPPPSPPPSTSLPTGGFVPFALSRNRLFPSS-----P 133

Query: 122 STWDQHLTNKRSSDYIPLGCTDSMYEVQNPAQYFSLDEHIESPNSGLSGFDCSYADNAAM 181
           ST  Q LT+K + D+I L  TDSMYE+QNPAQ+FSLD+H+E PNSGLSG+DCSY D+A +
Sbjct: 134 ST-PQQLTDKPTPDFITLSYTDSMYELQNPAQFFSLDDHVEPPNSGLSGYDCSYVDHAGL 193

Query: 182 VNSLMSSTRTARHYSTVSEVQTNKICHYYNKGFCKHGNSCRYVHSNLIPDTFSQLYNTNS 241
           VN+L + T TARHYSTV E    KICHYYNKG+CKHG  CRY+H+N I ++ SQ+YN NS
Sbjct: 194 VNNLSTRT-TARHYSTVPEYHP-KICHYYNKGYCKHGYGCRYLHTNPIFESVSQVYNGNS 253

Query: 242 VNDDHVFRPGSLEKLEFEIVELLKSRRGTPISIASLPMIYYEKYGKVLQAEGYLTESQRH 301
           VN+DHVFRPGSLEKLEFEIVELLKSRRG PISIASLPMIYYE YGKVLQAEGYLTESQRH
Sbjct: 254 VNEDHVFRPGSLEKLEFEIVELLKSRRGNPISIASLPMIYYENYGKVLQAEGYLTESQRH 313

Query: 302 GKSGFSLTKLLTRLKSSIQVIDRPHGQHAVILAEDASKFIDHRNEKND---PGPIVSSAR 361
           GKSGFSLTKLLTRLK SIQVIDRPHGQHAVILAEDA +FIDHR EKND    GPIVSSAR
Sbjct: 314 GKSGFSLTKLLTRLK-SIQVIDRPHGQHAVILAEDAPRFIDHRTEKNDHGPHGPIVSSAR 373

Query: 362 QIYLTFPADSTFTENDVADYFSDHYGLVEDVRIPCQQRRMFGFVTFHSIETVKLILSQDS 421
           QIYLTFPADS FTE+DV+DYFSD YGLVEDVRIPCQQ+RMFGFVTF++IETV LILSQD+
Sbjct: 374 QIYLTFPADSNFTEDDVSDYFSDQYGLVEDVRIPCQQKRMFGFVTFYNIETVNLILSQDN 433

Query: 422 EHLICGARVLVKPYREKSKLLERKFQEKFEQQQHQQTYYSPHYNDLEAEQQLHSIPRGYE 481
           EHLICGARVLVKPYREKSK L+R+ QEK EQ   Q+ YY+ HYN+    + LHS    YE
Sbjct: 434 EHLICGARVLVKPYREKSK-LDRRNQEKIEQ---QKLYYASHYNNSLETEHLHS---SYE 493

Query: 482 ASRLLRLRLE-------------EEEQQQQQALEVERRLSEMSLMQKSVLNQPYFSYQMK 541
            SR+  LR+E             +++QQQQQA EVERRLSEM+LM KSV+NQPYFSYQMK
Sbjct: 494 DSRMFSLRIEQQQQQQQQQQQQQQQQQQQQQAYEVERRLSEMNLMVKSVMNQPYFSYQMK 553

Query: 542 ELKVPEEHFSFPTTDRFDHLLEVLKSGSGSR--------SGSLSDDNINKPPRNPTDWNH 572
           +L VPE+HFSFP  +R D+LL+ LK+G+G+         +G+ S  + NKP     DWN 
Sbjct: 554 QLDVPEDHFSFPIAERLDNLLDALKTGAGASASASASAGAGAGSSGHNNKPAE--ADWN- 606

[Close]

BLAST of Lcy11g015450 vs. TAIR 10
Match: AT2G05160.1 (CCCH-type zinc fingerfamily protein with RNA-binding domain )

HSP 1 Score: 369.4 bits (947), Expect = 5.4e-102
Identity = 227/543 (41.80%), Postives = 324/543 (59.67%), Query Frame = 0


Query: 1   MEFSEYTRIVFNRISKIDPENVRKIVGFLLL-HDHVDQEMARLALGPDQYILDVVYLAKT 60
           M F+E   +V  RI +++PEN  KI G+LLL  ++ +++M RLA  PD  +  V+   K 
Sbjct: 1   MNFTESMNVVHARIQQLEPENAAKIFGYLLLMQENGNRDMIRLAFCPDSVMCSVINCVKY 60

Query: 61  ELHILALRSMQLSTVSSPGAFVPLARNRQQFPSSDNFHAPSTWDQHLTNKRS-----SDY 120
           E                      LARN   + S  + H P+      T         S  
Sbjct: 61  E----------------------LARNSHHYHSPPSDHIPTPKFGSFTGSSPLSVSVSPP 120

Query: 121 IPLGCTDSMYE---VQNPAQYFSLDEHIESPNSGLSGFDCSYADNAAMVNSLMSSTRTAR 180
           +  G  ++  E   +QN  Q+ + ++ + SP          +++            RT+R
Sbjct: 121 MKTGFWENSTEMDTLQNNLQFLNFEDPLTSP---------EFSNGFFSQERQCLPLRTSR 180

Query: 181 HYSTVSEVQTNKICHYYNKGFCKHGNSCRYVHSNLIP--DTFSQLYNTNS--VNDDHVFR 240
              ++ E    KICHY+NKGFCKHGN+CRY H  +IP  ++F+Q++N N+   +++HV  
Sbjct: 181 RSPSLPEFPV-KICHYFNKGFCKHGNNCRYFHGQIIPERESFAQMFNPNNNLSDEEHVVS 240

Query: 241 PGSLEKLEFEIVELLKSRRGTPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLT 300
           P SLEKLE EI+ELLK RRG PISIASLPM+YYEKYG+ LQAEGYLTESQRHGK+G+SLT
Sbjct: 241 PVSLEKLEGEIIELLKLRRGAPISIASLPMMYYEKYGRTLQAEGYLTESQRHGKAGYSLT 300

Query: 301 KLLTRLKSSIQVIDRPHGQHAVILAEDASKFIDHRNEKNDPGPIVSSARQIYLTFPADST 360
           KLL RLK++I+++DRPHGQH+VILAEDASKF+++  E+N+ G I++ +RQIYLTFPA+S+
Sbjct: 301 KLLARLKNTIRLVDRPHGQHSVILAEDASKFVEYTGERNEHGAILAGSRQIYLTFPAESS 360

Query: 361 FTENDVADYFSDHYGLVEDVRIPCQQRRMFGFVTFHSIETVKLILSQDSEHLICGARVLV 420
           FTE+DV+ YF+  YG VEDVRIPCQQ+RM+GFVTF S ETVK IL++ + H IC ARVLV
Sbjct: 361 FTEHDVSIYFTS-YGHVEDVRIPCQQKRMYGFVTFASSETVKHILAKGNPHFICNARVLV 420

Query: 421 KPYREKSKLLERKFQEKFEQQQHQQTYYSPHYNDLEAEQQLHSI-PRGYEASRLLRLRLE 480
           KPYREKS+    ++ + + +  H   Y S     +E + +++++ PR  E+SR+ +  L 
Sbjct: 421 KPYREKSR--SSRYLDNY-KPLHGMRYGSKF---IERDIEMNTLPPRVSESSRMRKPFLS 480

Query: 481 EEEQQQQQALEVERRLSEMSLMQKSVLNQPYFSYQMKELKVPEEHFSFPTTDRFDHLLEV 530
           E EQ   ++L                 N  Y  +   + K+          +R  +LL+ 
Sbjct: 481 EPEQSVSKSLPT---------------NYSYLGFSSDDFKLTSNAEQEEQAERLSYLLDY 489

[Close]

BLAST of Lcy11g015450 vs. TAIR 10
Match: AT3G52980.1 (Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein )

HSP 1 Score: 320.5 bits (820), Expect = 2.9e-87
Identity = 193/409 (47.19%), Postives = 256/409 (62.59%), Query Frame = 0


Query: 1   MEFSEYTRIVFNRISKIDPENVRKIVGFLLL-HDHVDQEMARLALGPDQYILDVVYLAKT 60
           M F+E   +V NRI +++PEN  KI+G+LLL  D  D++M RLA  PD  +  ++   K 
Sbjct: 1   MNFTEAMNVVHNRIHQLEPENASKIIGYLLLMQDQNDRDMIRLAFCPDSVMRSMINCVKC 60

Query: 61  EL-------------HILALRSMQLSTVSSPGAFVPLARNRQQFPSSDNFHAPSTWDQHL 120
           EL             HI   +   LS  S+    V  +      P S      S W+   
Sbjct: 61  ELAKNSHYNNIPSSDHIQIRKFGSLSGSSNQSLLVSAS------PPSVLSMGTSFWEN-- 120

Query: 121 TNKRSSDYIPLGCTDSMYEVQNPAQYF-SLDEHIESPNSGLSGFDCSYADNAAMVNSLMS 180
           TN   S             +++  QYF   ++ + SP    S F       +    SL  
Sbjct: 121 TNDMDS------------SLKDNVQYFLDFEDSVTSPEFSTSFF-------SQKKQSL-- 180

Query: 181 STRTARHYSTVSEVQTNKICHYYNKGFCKHGNSCRYVHSNLIPDTFSQLYNTNSVNDDHV 240
           S RT+R   ++ E    KICHY+NKGFCKHGN+C   H+NL              +++HV
Sbjct: 181 SLRTSRRSLSLPEFPL-KICHYFNKGFCKHGNNC---HNNL-------------SDEEHV 240

Query: 241 FRPGSLEKLEFEIVELLKSRRGTPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFS 300
             PGSLEKLE EI+ELLKSRRG PISIA LPM+Y+EKYG+ LQAEGYLTESQRHGK+GFS
Sbjct: 241 VSPGSLEKLEREIIELLKSRRGAPISIAFLPMMYHEKYGRSLQAEGYLTESQRHGKAGFS 300

Query: 301 LTKLLTRLKSSIQVIDRPHGQHAVILAEDASKFIDHRNEKNDPGPIVSSARQIYLTFPAD 360
           LTKLL RLK++I++IDRPHGQH+VILAED SKF+++  E+++ G I++ +RQ+YLTFPA+
Sbjct: 301 LTKLLARLKNTIRLIDRPHGQHSVILAEDVSKFVEYTGERSEHGAILAGSRQVYLTFPAE 360

Query: 361 STFTENDVADYFSDHYGLVEDVRIPCQQRRMFGFVTFHSIETVKLILSQ 395
           S+FTE+DV++YFS+  G VEDVRIPCQQ+RM+GFVTF  +ETVK IL++
Sbjct: 361 SSFTEHDVSNYFSE-VGPVEDVRIPCQQKRMYGFVTFVYMETVKRILAK 362

[Close]

BLAST of Lcy11g015450 vs. TAIR 10
Match: AT5G12440.1 (CCCH-type zinc fingerfamily protein with RNA-binding domain )

HSP 1 Score: 153.7 bits (387), Expect = 4.7e-37
Identity = 150/537 (27.93%), Postives = 243/537 (45.25%), Query Frame = 0


Query: 1   MEFSEYTRIVFNRISKIDPENVRKIVGFLLLHDHVDQEMARLALGPDQYILDVVYLAKTE 60
           M+  + T ++  +I  ++P+   KI+G+LLLHD  D+++  LA GP+  +   +   K+ 
Sbjct: 1   MDSGDATSLLLTKIRSLEPDYAPKIIGYLLLHDFGDRDLMHLARGPESILQSTISKVKSL 60

Query: 61  LHILALRSMQLSTVSSPGAFVPLARN----------------RQQFPSSDNFHAPSTWDQ 120
           L I +  S   ST +SP    P+ R                 R+  PSS +  +P +++ 
Sbjct: 61  LGIFSNNSPS-STPTSPSPLNPICRPPLNGRGSSHSNGFMDFRRNSPSSPSSTSPWSFNN 120

Query: 121 HLTNKR------SSDYIPLGCTDSMYEVQNPAQYFSLDEHIESPNSGLSG---FDC-SYA 180
            +          S  + P+    S ++    +   S           L      DC S+ 
Sbjct: 121 CINGNNGNNPHISPKHTPISKPFSSHQSNGLSATHSGSADAAGGADLLDDQQLNDCLSFL 180

Query: 181 DNAAMVNSLMSSTRTARHYSTVSEVQTN-----------------------KICHYYNKG 240
           D++      +        YS   + +T+                       K C Y+++G
Sbjct: 181 DDSCSKTEDLVDPSIPLDYSVDGDGETHLHRRSFSCDASFVSGDDGFGGGCKPCVYFSRG 240

Query: 241 FCKHGNSCRYVHSNLIPDTFSQLYNTNSVNDDHVFRPGSLEKLEFEIVEL---LKSRRGT 300
            CK+G SC+++H    PD      + N +  D   +  +  +   E++ L    + +R  
Sbjct: 241 LCKNGESCKFIHGG-YPDNM----DGNGIVADSPRKMENFVRQHEEMMRLKLAYQQQRLA 300

Query: 301 PISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKSSIQVIDRPHGQHA 360
              +   P + YEK    L  +     +QR G   F   +  +   SS   ++R      
Sbjct: 301 SQILGRAPQLPYEKRMDFLLQQ----HAQRDGGLPFGDERFWS---SSPGRLER------ 360

Query: 361 VILAEDASKFIDHRNEKNDPGPIVSSARQIYLTFPADSTFTENDVADYFSDHYGLVEDVR 420
               E A    D  N         S++RQIYLTFPADSTF + DVA YFS  +G V+DVR
Sbjct: 361 ---MELAMHLGDQSN---------SASRQIYLTFPADSTFKDEDVATYFS-LFGTVQDVR 420

Query: 421 IPCQQRRMFGFVTFHSIETVKLILSQDSEHLICGARVLVKPYREKSKLLERKFQEKFEQQ 480
           IP QQ+RMFGFV+F   ETVK++L++ + H IC +RVLVKPY+EK K+L++K Q+  +QQ
Sbjct: 421 IPYQQKRMFGFVSFAHPETVKVVLARGNPHFICDSRVLVKPYKEKGKVLDKKQQQLLQQQ 480

Query: 481 QHQQTY---YSPHYNDLEAEQQLH-SIPRGYEASRLLRLRLEEEEQQQQQALEVERR 482
             +  Y    SP   D   +   H      YE   ++R ++E+ +    +A+E+ERR
Sbjct: 481 IERGNYSPCSSPSGIDPREQSDFHLGSKMLYERREMMRRKIEQAD--LLRAIELERR 503

[Close]

BLAST of Lcy11g015450 vs. TAIR 10
Match: AT5G12440.2 (CCCH-type zinc fingerfamily protein with RNA-binding domain )

HSP 1 Score: 153.7 bits (387), Expect = 4.7e-37
Identity = 150/537 (27.93%), Postives = 243/537 (45.25%), Query Frame = 0


Query: 1   MEFSEYTRIVFNRISKIDPENVRKIVGFLLLHDHVDQEMARLALGPDQYILDVVYLAKTE 60
           M+  + T ++  +I  ++P+   KI+G+LLLHD  D+++  LA GP+  +   +   K+ 
Sbjct: 1   MDSGDATSLLLTKIRSLEPDYAPKIIGYLLLHDFGDRDLMHLARGPESILQSTISKVKSL 60

Query: 61  LHILALRSMQLSTVSSPGAFVPLARN----------------RQQFPSSDNFHAPSTWDQ 120
           L I +  S   ST +SP    P+ R                 R+  PSS +  +P +++ 
Sbjct: 61  LGIFSNNSPS-STPTSPSPLNPICRPPLNGRGSSHSNGFMDFRRNSPSSPSSTSPWSFNN 120

Query: 121 HLTNKR------SSDYIPLGCTDSMYEVQNPAQYFSLDEHIESPNSGLSG---FDC-SYA 180
            +          S  + P+    S ++    +   S           L      DC S+ 
Sbjct: 121 CINGNNGNNPHISPKHTPISKPFSSHQSNGLSATHSGSADAAGGADLLDDQQLNDCLSFL 180

Query: 181 DNAAMVNSLMSSTRTARHYSTVSEVQTN-----------------------KICHYYNKG 240
           D++      +        YS   + +T+                       K C Y+++G
Sbjct: 181 DDSCSKTEDLVDPSIPLDYSVDGDGETHLHRRSFSCDASFVSGDDGFGGGCKPCVYFSRG 240

Query: 241 FCKHGNSCRYVHSNLIPDTFSQLYNTNSVNDDHVFRPGSLEKLEFEIVEL---LKSRRGT 300
            CK+G SC+++H    PD      + N +  D   +  +  +   E++ L    + +R  
Sbjct: 241 LCKNGESCKFIHGG-YPDNM----DGNGIVADSPRKMENFVRQHEEMMRLKLAYQQQRLA 300

Query: 301 PISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKSSIQVIDRPHGQHA 360
              +   P + YEK    L  +     +QR G   F   +  +   SS   ++R      
Sbjct: 301 SQILGRAPQLPYEKRMDFLLQQ----HAQRDGGLPFGDERFWS---SSPGRLER------ 360

Query: 361 VILAEDASKFIDHRNEKNDPGPIVSSARQIYLTFPADSTFTENDVADYFSDHYGLVEDVR 420
               E A    D  N         S++RQIYLTFPADSTF + DVA YFS  +G V+DVR
Sbjct: 361 ---MELAMHLGDQSN---------SASRQIYLTFPADSTFKDEDVATYFS-LFGTVQDVR 420

Query: 421 IPCQQRRMFGFVTFHSIETVKLILSQDSEHLICGARVLVKPYREKSKLLERKFQEKFEQQ 480
           IP QQ+RMFGFV+F   ETVK++L++ + H IC +RVLVKPY+EK K+L++K Q+  +QQ
Sbjct: 421 IPYQQKRMFGFVSFAHPETVKVVLARGNPHFICDSRVLVKPYKEKGKVLDKKQQQLLQQQ 480

Query: 481 QHQQTY---YSPHYNDLEAEQQLH-SIPRGYEASRLLRLRLEEEEQQQQQALEVERR 482
             +  Y    SP   D   +   H      YE   ++R ++E+ +    +A+E+ERR
Sbjct: 481 IERGNYSPCSSPSGIDPREQSDFHLGSKMLYERREMMRRKIEQAD--LLRAIELERR 503

[Close]

BLAST of Lcy11g015450 vs. TAIR 10
Match: AT5G12440.3 (CCCH-type zinc fingerfamily protein with RNA-binding domain )

HSP 1 Score: 153.7 bits (387), Expect = 4.7e-37
Identity = 150/537 (27.93%), Postives = 243/537 (45.25%), Query Frame = 0


Query: 1   MEFSEYTRIVFNRISKIDPENVRKIVGFLLLHDHVDQEMARLALGPDQYILDVVYLAKTE 60
           M+  + T ++  +I  ++P+   KI+G+LLLHD  D+++  LA GP+  +   +   K+ 
Sbjct: 1   MDSGDATSLLLTKIRSLEPDYAPKIIGYLLLHDFGDRDLMHLARGPESILQSTISKVKSL 60

Query: 61  LHILALRSMQLSTVSSPGAFVPLARN----------------RQQFPSSDNFHAPSTWDQ 120
           L I +  S   ST +SP    P+ R                 R+  PSS +  +P +++ 
Sbjct: 61  LGIFSNNSPS-STPTSPSPLNPICRPPLNGRGSSHSNGFMDFRRNSPSSPSSTSPWSFNN 120

Query: 121 HLTNKR------SSDYIPLGCTDSMYEVQNPAQYFSLDEHIESPNSGLSG---FDC-SYA 180
            +          S  + P+    S ++    +   S           L      DC S+ 
Sbjct: 121 CINGNNGNNPHISPKHTPISKPFSSHQSNGLSATHSGSADAAGGADLLDDQQLNDCLSFL 180

Query: 181 DNAAMVNSLMSSTRTARHYSTVSEVQTN-----------------------KICHYYNKG 240
           D++      +        YS   + +T+                       K C Y+++G
Sbjct: 181 DDSCSKTEDLVDPSIPLDYSVDGDGETHLHRRSFSCDASFVSGDDGFGGGCKPCVYFSRG 240

Query: 241 FCKHGNSCRYVHSNLIPDTFSQLYNTNSVNDDHVFRPGSLEKLEFEIVEL---LKSRRGT 300
            CK+G SC+++H    PD      + N +  D   +  +  +   E++ L    + +R  
Sbjct: 241 LCKNGESCKFIHGG-YPDNM----DGNGIVADSPRKMENFVRQHEEMMRLKLAYQQQRLA 300

Query: 301 PISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKSSIQVIDRPHGQHA 360
              +   P + YEK    L  +     +QR G   F   +  +   SS   ++R      
Sbjct: 301 SQILGRAPQLPYEKRMDFLLQQ----HAQRDGGLPFGDERFWS---SSPGRLER------ 360

Query: 361 VILAEDASKFIDHRNEKNDPGPIVSSARQIYLTFPADSTFTENDVADYFSDHYGLVEDVR 420
               E A    D  N         S++RQIYLTFPADSTF + DVA YFS  +G V+DVR
Sbjct: 361 ---MELAMHLGDQSN---------SASRQIYLTFPADSTFKDEDVATYFS-LFGTVQDVR 420

Query: 421 IPCQQRRMFGFVTFHSIETVKLILSQDSEHLICGARVLVKPYREKSKLLERKFQEKFEQQ 480
           IP QQ+RMFGFV+F   ETVK++L++ + H IC +RVLVKPY+EK K+L++K Q+  +QQ
Sbjct: 421 IPYQQKRMFGFVSFAHPETVKVVLARGNPHFICDSRVLVKPYKEKGKVLDKKQQQLLQQQ 480

Query: 481 QHQQTY---YSPHYNDLEAEQQLH-SIPRGYEASRLLRLRLEEEEQQQQQALEVERR 482
             +  Y    SP   D   +   H      YE   ++R ++E+ +    +A+E+ERR
Sbjct: 481 IERGNYSPCSSPSGIDPREQSDFHLGSKMLYERREMMRRKIEQAD--LLRAIELERR 503

The following BLAST results are available for this feature:

BLAST of Lcy11g015450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJ41	7.7e-101	41.80	Zinc finger CCCH domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q6ZK57	8.0e-82	37.41	Zinc finger CCCH domain-containing protein 54 OS=Oryza sativa subsp. japonica OX...	[more]
Q84ZT0	2.9e-47	45.75	Putative zinc finger CCCH domain-containing protein 51 OS=Oryza sativa subsp. ja...	[more]
Q0D3J9	6.2e-42	30.88	Zinc finger CCCH domain-containing protein 53 OS=Oryza sativa subsp. japonica OX...	[more]
Q10LZ9	3.1e-41	31.46	Zinc finger CCCH domain-containing protein 23 OS=Oryza sativa subsp. japonica OX...	[more]

BLAST of Lcy11g015450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KX51	1.6e-210	67.21	zinc finger CCCH domain-containing protein 18-like OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1F359	1.0e-209	67.27	zinc finger CCCH domain-containing protein 18-like isoform X2 OS=Cucurbita mosch...	[more]
A0A6J1F075	3.3e-208	65.87	zinc finger CCCH domain-containing protein 18-like isoform X1 OS=Cucurbita mosch...	[more]
A0A0A0L4W6	1.7e-204	69.43	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G061520 PE=4 SV=1	[more]
A0A5A7VHD9	9.8e-200	68.99	Zinc finger CCCH domain-containing protein 18-like OS=Cucumis melo var. makuwa O...	[more]

BLAST of Lcy11g015450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023005335.1	3.3e-210	67.21	zinc finger CCCH domain-containing protein 18-like [Cucurbita maxima]	[more]
XP_022934572.1	2.1e-209	67.27	zinc finger CCCH domain-containing protein 18-like isoform X2 [Cucurbita moschat...	[more]
XP_038905763.1	2.8e-209	70.10	zinc finger CCCH domain-containing protein 18-like isoform X1 [Benincasa hispida...	[more]
XP_038905764.1	2.8e-209	70.10	zinc finger CCCH domain-containing protein 18-like isoform X2 [Benincasa hispida...	[more]
KAG7028283.1	1.1e-208	66.72	Zinc finger CCCH domain-containing protein 18 [Cucurbita argyrosperma subsp. arg...	[more]

BLAST of Lcy11g015450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G05160.1	5.4e-102	41.80	CCCH-type zinc fingerfamily protein with RNA-binding domain	[more]
AT3G52980.1	2.9e-87	47.19	Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing ...	[more]
AT5G12440.1	4.7e-37	27.93	CCCH-type zinc fingerfamily protein with RNA-binding domain	[more]
AT5G12440.2	4.7e-37	27.93	CCCH-type zinc fingerfamily protein with RNA-binding domain	[more]
AT5G12440.3	4.7e-37	27.93	CCCH-type zinc fingerfamily protein with RNA-binding domain	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 462..485
None	No IPR available	GENE3D	4.10.1000.10		coord: 174..264 e-value: 7.2E-6 score: 27.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 530..551
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 530..557
None	No IPR available	PANTHER	PTHR24009:SF23	TRANSCRIPTION FACTOR C3H FAMILY-RELATED	coord: 1..536
None	No IPR available	PANTHER	PTHR24009	RNA-BINDING (RRM/RBD/RNP MOTIFS)	coord: 1..536
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 337..408 e-value: 3.2E-5 score: 33.3
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 347..393 e-value: 1.1E-5 score: 25.2
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 336..412 score: 9.882637
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 342..410 e-value: 5.4E-9 score: 38.2
IPR025605	OST-HTH/LOTUS domain	PFAM	PF12872	OST-HTH	coord: 230..307 e-value: 1.9E-10 score: 40.4
IPR025605	OST-HTH/LOTUS domain	PROSITE	PS51644	HTH_OST	coord: 230..313 score: 10.65761
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 184..204 e-value: 1.3E-4 score: 21.8
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 180..206 score: 14.1828
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 346..415
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 182..204

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g015450.1	Lcy11g015450.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding