Lcy11g014710 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g014710
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Unknown protein
Location	Chr11: 31003408 .. 31004102 (-)
RNA-Seq Expression	Lcy11g014710
Synteny	Lcy11g014710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTGCAAGCTTCTCTTTCTCATGCTCCTTGGCGCCCTTGTTTGCGCCACCGGAGCTCGAAAGCTCGTCCACGATCCGTTAAAAGATGAGAAATTTTTCCATGGTGGCGGGTTCGGCGGAGGCCGAGGTGGAGGGTTTGGTGGAGGATCTGGATTTGGTGGGGGTGGTGGGGCTGGAGGTGGCTTCGGTGGGGGTGGCGGTCGAGGTGGAGGAGGAGGTTTTGGAGGTGGATCTGGTGGAGGCTTCGGAGGAGGATCCGGTGGAGGGTTCGGAGGTGGGGCTGGTTCAGGTGGTGGATTTGGTGGTGGAGGAGGTGGAGGGTTTGGTGGTGGTGGTGGAGGTGGACTTGGCGGTGGCGGAGGATTCGGCGGAGGCGCCGGGTCCGGTGGCGGATTTGGAGGATTTCCTTGAACTAATCAAAAGTGTTTCTATATACTAAAAACACTGTCACTACTATAAGTACTTTGTGCAATGTGTGTTTGTATGCTGAAAAGAGTTTGACGAGGACTTATCTCAACTCTCAGTATAAGTTTGTTTATTTCCTGCGACTACAAAGTATATTAAACACAGCAAAACTACAGAATAATTCTGCCTATGTTCCTGGTTGTATTTTCAATCAAGAAGCTTTTTGTTATTGTAATCTCAATCACTACAAATTCCATATCCTAATTAATATATCAACTCAAGTTCTG

mRNA sequence

ATGGCTTGCAAGCTTCTCTTTCTCATGCTCCTTGGCGCCCTTGTTTGCGCCACCGGAGCTCGAAAGCTCGTCCACGATCCGTTAAAAGATGAGAAATTTTTCCATGGTGGCGGGTTCGGCGGAGGCCGAGGTGGAGGGTTTGGTGGAGGATCTGGATTTGGTGGGGGTGGTGGGGCTGGAGGTGGCTTCGGTGGGGGTGGCGGTCGAGGTGGAGGAGGAGGTTTTGGAGGTGGATCTGGTGGAGGCTTCGGAGGAGGATCCGGTGGAGGGTTCGGAGGTGGGGCTGGTTCAGGTGGTGGATTTGGTGGTGGAGGAGGTGGAGGGTTTGGTGGTGGTGGTGGAGGTGGACTTGGCGGTGGCGGAGGATTCGGCGGAGGCGCCGGGTCCGGTGGCGGATTTGGAGGATTTCCTTGAACTAATCAAAAGTGTTTCTATATACTAAAAACACTGTCACTACTATAAGTACTTTGTGCAATGTGTGTTTGTATGCTGAAAAGAGTTTGACGAGGACTTATCTCAACTCTCAGTATAAGTTTGTTTATTTCCTGCGACTACAAAGTATATTAAACACAGCAAAACTACAGAATAATTCTGCCTATGTTCCTGGTTGTATTTTCAATCAAGAAGCTTTTTGTTATTGTAATCTCAATCACTACAAATTCCATATCCTAATTAATATATCAACTCAAGTTCTG

Coding sequence (CDS)

ATGGCTTGCAAGCTTCTCTTTCTCATGCTCCTTGGCGCCCTTGTTTGCGCCACCGGAGCTCGAAAGCTCGTCCACGATCCGTTAAAAGATGAGAAATTTTTCCATGGTGGCGGGTTCGGCGGAGGCCGAGGTGGAGGGTTTGGTGGAGGATCTGGATTTGGTGGGGGTGGTGGGGCTGGAGGTGGCTTCGGTGGGGGTGGCGGTCGAGGTGGAGGAGGAGGTTTTGGAGGTGGATCTGGTGGAGGCTTCGGAGGAGGATCCGGTGGAGGGTTCGGAGGTGGGGCTGGTTCAGGTGGTGGATTTGGTGGTGGAGGAGGTGGAGGGTTTGGTGGTGGTGGTGGAGGTGGACTTGGCGGTGGCGGAGGATTCGGCGGAGGCGCCGGGTCCGGTGGCGGATTTGGAGGATTTCCTTGA

Protein sequence

MACKLLFLMLLGALVCATGARKLVHDPLKDEKFFHGGGFGGGRGGGFGGGSGFGGGGGAGGGFGGGGGRGGGGGFGGGSGGGFGGGSGGGFGGGAGSGGGFGGGGGGGFGGGGGGGLGGGGGFGGGAGSGGGFGGFP

Homology

[Close]

BLAST of Lcy11g014710 vs. ExPASy TrEMBL
Match: A0A0A0L4Y2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G064230 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 6.7e-11
Identity = 106/137 (77.37%), Postives = 108/137 (78.83%), Query Frame = 0


Query: 1   MACKLLFLMLLGALVCATGARKLVHDPLKDEKFFHGGGFGGGRGGGFGGGSGFGGGGGAG 60
           MACKL FLMLLG   CATGARKL HDPLKDEKFFHGGG GGG GGG GGG G GGG G G
Sbjct: 1   MACKLFFLMLLGVFFCATGARKLAHDPLKDEKFFHGGGLGGGGGGGLGGGGGAGGGFGGG 60

Query: 61  GGFGGGGGRGGGGGFGGGSGGGFGGGSGGGFGGGAGSGGGFGGGGGGGFGGGGGGGLGGG 120
            GFGGG G GGG G G G GGG GGGSGGGFG G G GGG+G GGGGGFGGG GGG G G
Sbjct: 61  SGFGGGSGFGGGAGGGYGGGGGLGGGSGGGFGSGGGFGGGYGSGGGGGFGGGSGGGGGLG 120

Query: 121 GGFGGGAGSGGGFGGFP 138
           GG+GGG GSGGGFG FP
Sbjct: 121 GGYGGGVGSGGGFGEFP 137

[Close]

BLAST of Lcy11g014710 vs. NCBI nr
Match: XP_031737995.1 (glycine-rich protein 5 [Cucumis sativus] >KGN56074.1 hypothetical protein Csa_011582 [Cucumis sativus])

HSP 1 Score: 77.0 bits (188), Expect = 1.4e-10
Identity = 106/137 (77.37%), Postives = 108/137 (78.83%), Query Frame = 0


Query: 1   MACKLLFLMLLGALVCATGARKLVHDPLKDEKFFHGGGFGGGRGGGFGGGSGFGGGGGAG 60
           MACKL FLMLLG   CATGARKL HDPLKDEKFFHGGG GGG GGG GGG G GGG G G
Sbjct: 1   MACKLFFLMLLGVFFCATGARKLAHDPLKDEKFFHGGGLGGGGGGGLGGGGGAGGGFGGG 60

Query: 61  GGFGGGGGRGGGGGFGGGSGGGFGGGSGGGFGGGAGSGGGFGGGGGGGFGGGGGGGLGGG 120
            GFGGG G GGG G G G GGG GGGSGGGFG G G GGG+G GGGGGFGGG GGG G G
Sbjct: 61  SGFGGGSGFGGGAGGGYGGGGGLGGGSGGGFGSGGGFGGGYGSGGGGGFGGGSGGGGGLG 120

Query: 121 GGFGGGAGSGGGFGGFP 138
           GG+GGG GSGGGFG FP
Sbjct: 121 GGYGGGVGSGGGFGEFP 137

The following BLAST results are available for this feature:

BLAST of Lcy11g014710 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy11g014710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4Y2	6.7e-11	77.37	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G064230 PE=4 SV=1	[more]

BLAST of Lcy11g014710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031737995.1	1.4e-10	77.37	glycine-rich protein 5 [Cucumis sativus] >KGN56074.1 hypothetical protein Csa_01...	[more]

BLAST of Lcy11g014710 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g014710.1	Lcy11g014710.1	mRNA