Lcy11g014600 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g014600
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Unknown protein
Location	Chr11: 30311512 .. 30315129 (+)
RNA-Seq Expression	Lcy11g014600
Synteny	Lcy11g014600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGACGCTCTCTATTTCTCTTCTCTCTCATTTCTCACTCTCTCTCTGTCCAAAGCTCAGCTTCTCCCGCTCTTTCTCTGTATCTCTGCTGAGAGCTCTCCAGACCGCCATTGGAGGCCGTGGAGCTCTCGTCAGAGCCGTAAGTTCAAGCTTTGCATTGATATTTTTTTATTATCGCTTTATCTGATCTCTTGCGCTCATTTACAAGTATTTATTTTGTGTGTTTGAACGCTTGTTTGGTTGTTTTAGCGGTTTCGAATCTCTGACGGATGATGATTGTTGTGGACGTTTCGATTTACTTGTTTTGGTGCACGACGTGGATCCATAGCGCCGATTTCCGTTTTATTTAAGTCTATTGAGAAATCTAGCTTGCGCTTGATGCTCTGGCCTTTGTCTTGCTGTTCAAATCGTGTGGATTTTTAAGCGTACTGCATGATTTCTCGTTGTTGCATCCATGTGCTTCGTTTTGGAGGCGGAAATTTGATTTATTAAGTTTTTGGAAGCGTGCGTGTTTCATGGGCGGCGGTGGTGAGAGGGCTTGTATTGGGTGGGGGTGGGTGGAGGGAGAGGAGAAATAGGGAGTTTTCTACGGTTACGGGACGAAAATTAAATTATTAGGTTTGCACATTGGGCTTTTGTGTTGTCTATTGTTTATTGTTGTTGTAATCTATGTCCGTAAGTTTCTTTGAAAATGTAACAGGAACTCCATACTACTTTTCGTTCCTCTTTACTTGCACTGGAACAGCTTTACTACAAAGCCAGAGAATAAATTATGGGTCGAGTGTCTTAGTAGTTTTACACGTTTTTCAGATTTTTATCTAATAGTTGTAGAGGTGAAGAGGGCCTTCTGCTATAGCATTTCCTTCAAGTCTTCAATCAAGCATTGCATATTATTTCACTTTCTGAAATAGCCGCTTATCATGCTTGCTTTTTCTGGATTTTCATCTGTACCTCTACTTTTCACTGTTTTCAGCTTTCGTGGAGTTTGGCTCTCATACTGTACTACTCTCGTTTATAAATAGATGATTCAAGTTCACATGTAGGCTTGTTAGTTCTCTTTTGAGAGCCGAGGGAACTTCGTACAAGAAAAGGACTCCATCACCGATTCGGTATTGTCTTCTTCTCTTTTTTCATTTCTCTCTACAATTCGGCTGTTAATATCTTCTTCTTGACGGTATTGTCTTCTTCTTCTTTTATTTCTTGACTTATTGTCTTCTTCTCTCTATAATTTGGTCATTAGTACAAATTTTATGTTTAATTTTGTTTGAAAGTTAAAAAACTCTTTGCATGGCCGGTAAAATGGAGACAATAATAAATGTTAACTTTCAAATTGGCTTAGGATCTAAGGGAAGCACTCGGAAAAAAATTAAATGGAATCTAGACTGAATGGATTGAGGTTCTCACGAAAGGAAAACAAACAAAAAGAATGTCTTATTCAATACAATTTGGAAAAAAACTTGGTGAAGTTGAGGCTCAGAAAATGGAATAATTCAAATAATTCAAATTGTAAGAACGGCCTGGAGGAGTCCGTTGGAGAAACTAACCAACCAATTTCTGAAAAAGAGAAAGAAGAAAAGGAAGAAGAGAAAGAGCAGTATGAGAAATTTGTAGACGTTTCGGATGAAAAACAAGAGCAAAAGCATGAATTTTTGGACCTTCTGAAAGAAATTTTATCAACATCCTTGCAATATGTCGAGCATGTTTTGACGTTGGCCAGAGACAGGGAGAAAAATCTACTACAATGGGTTTTTCATCTTACCTGGGGTATTGAGATACTAGATGCATTATCAGAGAAAATTCTCGATATACAGAATGAAGATCTCTTCAAGGATAATGAGAAGAACTGCTACGACATTCAAGGTGTTATCGCTAACCTGCTCGACGTTTTCAAACGTCTGGACATTCCTGAAATGTTAATTGTTTGGAATAAGAACTGTACCGAAGAAGAATTGTCCCTTTGTGCAGGGAACCTTTTCGAATGCAAGAATATATTGACAGAGAATTTGGAAGGAAATAAATCAAACAAAAATTCAGTGGAATCTGCTTCCAGGAAGGAGAAAGAAGGATGTATTGACCAATACAATCTGGAGAAAGATCATGTGGCATTGACGCTGGAAAAGTGGCACCGTTTAAATGTTTCAGACTTTCTCCACATAACAGCCGAGGTTGATCCGACAGAAGTCTTGGAGGAATTGGAATGGCTTTTTGATGACTTTATCGGATATATTTGCTGGAAAATAGAAAATGATGATCTTTATGAAAGTACTAGGCAACACCTAGTAGAATCCATGGAAAGGATATACCAGAGAGTACTGAAGGTAGAAGTAGGCAAGGATGACTCTCCAGAACTCGTAGATATTCTTAATCAAGTGAAAAATGTTTTTCAGGACCTTCAGAACCTCACTCATTTGTCGAACACTGATGATGTAAATAAGTCTAAGAAACAAATCAATGCACTACTTTGGGAAACTATCCAGTGGAAGACCAGAGAATCGAAAATAAGTAAGAAGAGAAGAAGAGAAAATATAACGGTAGTGGAATTAGACCGAGGATTGTTTACTGACTTTCTGAATGACATTCTATTGGGATCCTTGGACTACATTGGTCATGTTGACAAGCTTTTGATACTGGCCCAAAATAAAGAGAAGAATTCAGACAGATGGATTTTTGAACTCAAATGCGGAATTGAGAATCTTGATAAATTGTCTCAGACAATTATCAACGTACAAGATGAGTTGGAACTATTCAAGGATGATATCAACAATTATAATGACATCCAAACCATTATATTTGATATGCTTCCCGTTTTTAGACATTCGAACACTCTTGAAATTTTGATTGATTGGAACATAAATCCTACGGAGGAAGAATTATGGATTTGTGATGGGGAACTTAATAAATGTAGAATTGCTCTGGAAGAAAAAATTGATAGGCTTCTGGAAGGTGGAGATAGTAACTAAAATTCATGTACATTTTTTTTTTTTCATATAATTGAATAACTAATGAATAGAAAGAAAAATGTCAGATCCCTTTCTATTATAATATACAGGTTAGAGAAAGGGAGATTCTATGTTAGTTAGTCGAATCTTTGTGGCTGCCGATTTTCAATATAAAGATTTTTTTTGTCTCTCGGCTTCCTCTTCTCTCTGGTTTTTGCATGGGTTGGTTTCTGCATTTTATTGTCCTTTTCTTGTTCTCGGTGTTTTAAAGTTCCCTCATCTTTCCTAAGAAAATTTACAAGCCTATATATGGATAGACATACATACATGTGAGTTGCTCTTGTAGTCTTTAACTAAATTATGAATCGAGTTTGAAACTATTGCTTCAAATCTGAAGTTCATTGCTTGGAACTTTTATAATTAGTTGATGTTGCTATATTGGAGCTGCTCCTTGACCTTGGTGCGTGAAATATGGAGACGGACATTGAATTGGTTGAACTGTTTAATCCTCGGTTGGAAAGACTCAATTAAAATTACATGTCGTGGCCATTCTTTCAAGTGTCTTTTATAATTAATTATGCCTTTGAGCCCTCAGATTGGCTCTGCCAGCCGGCAGCAAATAGTGTATGGGCTAAAGCAGTTGATTGTTGGACCTTGTGCAATTAACTCTCTAGTGGTCTC

mRNA sequence

TGACGCTCTCTATTTCTCTTCTCTCTCATTTCTCACTCTCTCTCTGTCCAAAGCTCAGCTTCTCCCGCTCTTTCTCTGTATCTCTGCTGAGAGCTCTCCAGACCGCCATTGGAGGCCGTGGAGCTCTCGTCAGAGCCCTTTCGTGGAGTTTGGCTCTCATACTGTACTACTCTCGTTTATAAATAGATGATTCAAGTTCACATGTAGGCTTGTTAGTTCTCTTTTGAGAGCCGAGGGAACTTCGTACAAGAAAAGGACTCCATCACCGATTCGGTATTGTCTTCTTCTCTTTTTTCATTTCTCTCTACAATTCGGCTGTTAATATCTTCTTCTTGACGGTATTGTCTTCTTCTTCTTTTATTTCTTGACTTATTGTCTTCTTCTCTCTATAATTTGGTCATTAGTACAAATTTTATGTTTAATTTTGTTTGAAAGTTAAAAAACTCTTTGCATGGCCGGTAAAATGGAGACAATAATAAATGTTAACTTTCAAATTGGCTTAGGATCTAAGGGAAGCACTCGGAAAAAAATTAAATGGAATCTAGACTGAATGGATTGAGGTTCTCACGAAAGGAAAACAAACAAAAAGAATGTCTTATTCAATACAATTTGGAAAAAAACTTGGTGAAGTTGAGGCTCAGAAAATGGAATAATTCAAATAATTCAAATTGTAAGAACGGCCTGGAGGAGTCCGTTGGAGAAACTAACCAACCAATTTCTGAAAAAGAGAAAGAAGAAAAGGAAGAAGAGAAAGAGCAGTATGAGAAATTTGTAGACGTTTCGGATGAAAAACAAGAGCAAAAGCATGAATTTTTGGACCTTCTGAAAGAAATTTTATCAACATCCTTGCAATATGTCGAGCATGTTTTGACGTTGGCCAGAGACAGGGAGAAAAATCTACTACAATGGGTTTTTCATCTTACCTGGGGTATTGAGATACTAGATGCATTATCAGAGAAAATTCTCGATATACAGAATGAAGATCTCTTCAAGGATAATGAGAAGAACTGCTACGACATTCAAGGTGTTATCGCTAACCTGCTCGACGTTTTCAAACGTCTGGACATTCCTGAAATGTTAATTGTTTGGAATAAGAACTGTACCGAAGAAGAATTGTCCCTTTGTGCAGGGAACCTTTTCGAATGCAAGAATATATTGACAGAGAATTTGGAAGGAAATAAATCAAACAAAAATTCAGTGGAATCTGCTTCCAGGAAGGAGAAAGAAGGATGTATTGACCAATACAATCTGGAGAAAGATCATGTGGCATTGACGCTGGAAAAGTGGCACCGTTTAAATGTTTCAGACTTTCTCCACATAACAGCCGAGGTTGATCCGACAGAAGTCTTGGAGGAATTGGAATGGCTTTTTGATGACTTTATCGGATATATTTGCTGGAAAATAGAAAATGATGATCTTTATGAAAGTACTAGGCAACACCTAGTAGAATCCATGGAAAGGATATACCAGAGAGTACTGAAGGTAGAAGTAGGCAAGGATGACTCTCCAGAACTCGTAGATATTCTTAATCAAGTGAAAAATGTTTTTCAGGACCTTCAGAACCTCACTCATTTGTCGAACACTGATGATGTAAATAAGTCTAAGAAACAAATCAATGCACTACTTTGGGAAACTATCCAGTGGAAGACCAGAGAATCGAAAATAAGTAAGAAGAGAAGAAGAGAAAATATAACGGTAGTGGAATTAGACCGAGGATTGTTTACTGACTTTCTGAATGACATTCTATTGGGATCCTTGGACTACATTGGTCATGTTGACAAGCTTTTGATACTGGCCCAAAATAAAGAGAAGAATTCAGACAGATGGATTTTTGAACTCAAATGCGGAATTGAGAATCTTGATAAATTGTCTCAGACAATTATCAACGTACAAGATGAGTTGGAACTATTCAAGGATGATATCAACAATTATAATGACATCCAAACCATTATATTTGATATGCTTCCCGTTTTTAGACATTCGAACACTCTTGAAATTTTGATTGATTGGAACATAAATCCTACGGAGGAAGAATTATGGATTTGTGATGGGGAACTTAATAAATGTAGAATTGCTCTGGAAGAAAAAATTGATAGGCTTCTGGAAGGTGGAGATAGTAACTAAAATTCATGTACATTTTTTTTTTTTCATATAATTGAATAACTAATGAATAGAAAGAAAAATGTCAGATCCCTTTCTATTATAATATACAGGTTAGAGAAAGGGAGATTCTATGTTAGTTAGTCGAATCTTTGTGGCTGCCGATTTTCAATATAAAGATTTTTTTTGTCTCTCGGCTTCCTCTTCTCTCTGGTTTTTGCATGGGTTGGTTTCTGCATTTTATTGTCCTTTTCTTGTTCTCGGTGTTTTAAAGTTCCCTCATCTTTCCTAAGAAAATTTACAAGCCTATATATGGATAGACATACATACATGTGAGTTGCTCTTGTAGTCTTTAACTAAATTATGAATCGAGTTTGAAACTATTGCTTCAAATCTGAAGTTCATTGCTTGGAACTTTTATAATTAGTTGATGTTGCTATATTGGAGCTGCTCCTTGACCTTGGTGCGTGAAATATGGAGACGGACATTGAATTGGTTGAACTGTTTAATCCTCGGTTGGAAAGACTCAATTAAAATTACATGTCGTGGCCATTCTTTCAAGTGTCTTTTATAATTAATTATGCCTTTGAGCCCTCAGATTGGCTCTGCCAGCCGGCAGCAAATAGTGTATGGGCTAAAGCAGTTGATTGTTGGACCTTGTGCAATTAACTCTCTAGTGGTCTC

Coding sequence (CDS)

ATGGAATCTAGACTGAATGGATTGAGGTTCTCACGAAAGGAAAACAAACAAAAAGAATGTCTTATTCAATACAATTTGGAAAAAAACTTGGTGAAGTTGAGGCTCAGAAAATGGAATAATTCAAATAATTCAAATTGTAAGAACGGCCTGGAGGAGTCCGTTGGAGAAACTAACCAACCAATTTCTGAAAAAGAGAAAGAAGAAAAGGAAGAAGAGAAAGAGCAGTATGAGAAATTTGTAGACGTTTCGGATGAAAAACAAGAGCAAAAGCATGAATTTTTGGACCTTCTGAAAGAAATTTTATCAACATCCTTGCAATATGTCGAGCATGTTTTGACGTTGGCCAGAGACAGGGAGAAAAATCTACTACAATGGGTTTTTCATCTTACCTGGGGTATTGAGATACTAGATGCATTATCAGAGAAAATTCTCGATATACAGAATGAAGATCTCTTCAAGGATAATGAGAAGAACTGCTACGACATTCAAGGTGTTATCGCTAACCTGCTCGACGTTTTCAAACGTCTGGACATTCCTGAAATGTTAATTGTTTGGAATAAGAACTGTACCGAAGAAGAATTGTCCCTTTGTGCAGGGAACCTTTTCGAATGCAAGAATATATTGACAGAGAATTTGGAAGGAAATAAATCAAACAAAAATTCAGTGGAATCTGCTTCCAGGAAGGAGAAAGAAGGATGTATTGACCAATACAATCTGGAGAAAGATCATGTGGCATTGACGCTGGAAAAGTGGCACCGTTTAAATGTTTCAGACTTTCTCCACATAACAGCCGAGGTTGATCCGACAGAAGTCTTGGAGGAATTGGAATGGCTTTTTGATGACTTTATCGGATATATTTGCTGGAAAATAGAAAATGATGATCTTTATGAAAGTACTAGGCAACACCTAGTAGAATCCATGGAAAGGATATACCAGAGAGTACTGAAGGTAGAAGTAGGCAAGGATGACTCTCCAGAACTCGTAGATATTCTTAATCAAGTGAAAAATGTTTTTCAGGACCTTCAGAACCTCACTCATTTGTCGAACACTGATGATGTAAATAAGTCTAAGAAACAAATCAATGCACTACTTTGGGAAACTATCCAGTGGAAGACCAGAGAATCGAAAATAAGTAAGAAGAGAAGAAGAGAAAATATAACGGTAGTGGAATTAGACCGAGGATTGTTTACTGACTTTCTGAATGACATTCTATTGGGATCCTTGGACTACATTGGTCATGTTGACAAGCTTTTGATACTGGCCCAAAATAAAGAGAAGAATTCAGACAGATGGATTTTTGAACTCAAATGCGGAATTGAGAATCTTGATAAATTGTCTCAGACAATTATCAACGTACAAGATGAGTTGGAACTATTCAAGGATGATATCAACAATTATAATGACATCCAAACCATTATATTTGATATGCTTCCCGTTTTTAGACATTCGAACACTCTTGAAATTTTGATTGATTGGAACATAAATCCTACGGAGGAAGAATTATGGATTTGTGATGGGGAACTTAATAAATGTAGAATTGCTCTGGAAGAAAAAATTGATAGGCTTCTGGAAGGTGGAGATAGTAACTAA

Protein sequence

MESRLNGLRFSRKENKQKECLIQYNLEKNLVKLRLRKWNNSNNSNCKNGLEESVGETNQPISEKEKEEKEEEKEQYEKFVDVSDEKQEQKHEFLDLLKEILSTSLQYVEHVLTLARDREKNLLQWVFHLTWGIEILDALSEKILDIQNEDLFKDNEKNCYDIQGVIANLLDVFKRLDIPEMLIVWNKNCTEEELSLCAGNLFECKNILTENLEGNKSNKNSVESASRKEKEGCIDQYNLEKDHVALTLEKWHRLNVSDFLHITAEVDPTEVLEELEWLFDDFIGYICWKIENDDLYESTRQHLVESMERIYQRVLKVEVGKDDSPELVDILNQVKNVFQDLQNLTHLSNTDDVNKSKKQINALLWETIQWKTRESKISKKRRRENITVVELDRGLFTDFLNDILLGSLDYIGHVDKLLILAQNKEKNSDRWIFELKCGIENLDKLSQTIINVQDELELFKDDINNYNDIQTIIFDMLPVFRHSNTLEILIDWNINPTEEELWICDGELNKCRIALEEKIDRLLEGGDSN

Homology

The following BLAST results are available for this feature:

BLAST of Lcy11g014600 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy11g014600 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy11g014600 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy11g014600 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 62..89
None	No IPR available	COILS	Coil	Coil	coord: 442..462
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g014600.1	Lcy11g014600.1	mRNA