Lcy11g014290 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g014290
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	upstream activation factor subunit UAF30
Location	Chr11: 28061430 .. 28063143 (+)
RNA-Seq Expression	Lcy11g014290
Synteny	Lcy11g014290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGCCACAACGGTTGAAGACGACCATTACAGATAACCCAAAGAAGCTTGCCAACTTGATTGATCTCGTAAACCTTCCTTCAACTCTCAGAGACTTTGTGGGACAGTCCCAAATTTCTCGTCTGGGCTGTTTCAAATGTGTGTGGTCTTATATCAAAACCAACAATCTTCAGGTTCTTTTTTGTCTCATTTTATGGGTTTTCTGATTAGTTTTAGATGCATATTGATTATATTGGTATCAAAAAGAGACTTCCCTTGTTAAAAGCTTAGATCTACTTTTAAAAATTTTGTTATATATTCTACATTTTGTTCTGGTTAAAGTATAGTTTAAAAAGGAGAGGAGGAAGAGGGATAAAAGGAAAAGAGCAATCAAAGAGGAGAAGAAAGATCTGTAGGAGGACATCATTGGAATTAGGTAAAGGCAGATATCATGCAACAACAGGGGAAGTGAAGATAAGTCTGAAGACTCAGGATGAAAGAGGATCTCCTGAAATGAAAGTAATGAGAAACTGATGGAGGGATTTAACACAAAATACAGTTTGATAAAAGCATCTTTTCGCAACGAAAGATTGGATAAACTGAGATAGAGGTTACAAAGAGGGTCTAATATAGCTCAAACAGATCTAGAATTATATTAAGATATAGAAGATAGAAGAACTACAAGATAACCCAAAGGTACCTGAACCTCCCTTCATTGAGTATACACACTCAAGCCTAAACCATAATAACAATTCTTTAGCTTCATCCTTTACTACTCACTCTATTTATAACAGATCCCCCTAACAAACTCCTTGATCTAATTACTAATATGCCCTCAATACCCTAATAATACTCCTTACAACAATAGTATTCCTATCAGAGAAGAGATGCTTTTTACAGTTTTTTCAACCGCAGGGTCACCAAAGGAACACGATCTTGAGTTATGACCCGAGGAAGACCTAAGCCTGAATAGGTCATAGGCAACATAGAGGACCTCACAACCCTCCAGATGAACCCACCTCTCAAGCTTGACTAGCTCACTATTAATACTGACTAACAAATATTTCTCGTTATTAAATAAGACCAGAAATGACTTCAAAAACCTATAAAGTCCTATTAAGGCTCACAAATGACTCCTCCCTCCGGAAGCATATGGAAATAGTATTGTAACTGTAAATAAGTTAGATAGATGATGATGATTTCTCTCCTTACCAATAAAAGCCCTTCTCTATTAAACATTTATCCATTCTTCTCAAAACTAAGTCTGTTAAGCACATCCGCAACCACCTGAAAAGAAAATGATGCTTGATTTTACTTGCAAATTCAGTGACTTTTGTTTTTTGCACCAATTTGTAGTACAGTAGACTTTATGACTTTTTTTTCTTTGACAAGTACACTTTATGACTGTTTTCCAGCTTCCCAAACTCATACCATATAACTGTTCCATTGCCATTGGATATGAGTTTTGGTAAGCTGGAAGTTCTTGAGACTTTAAAGTAGAAGCACTTTTTTTTTCTAACTCTTATAAATATGTTTTCTGCTGGCCGATTAGATGTGTTTCTCCATTCTGATTAAAGGTTATGGATATGTACCTTTCTTGTCTAGGATCCGACCAACAAGAATGTGGTCATTTGTGATGAGAAGTTAAAGAGTATCTTGCTAGGCAAGCCCAAGGTCGAGCTAGCCGAACTTCCTGCCCTGATTAAATTACATTTCCCCAAAAACCCCAAGTGA

mRNA sequence

ATGCTGCCACAACGGTTGAAGACGACCATTACAGATAACCCAAAGAAGCTTGCCAACTTGATTGATCTCGTAAACCTTCCTTCAACTCTCAGAGACTTTGTGGGACAGTCCCAAATTTCTCGTCTGGGCTGTTTCAAATGTGTGTGGTCTTATATCAAAACCAACAATCTTCAGGATCCGACCAACAAGAATGTGGTCATTTGTGATGAGAAGTTAAAGAGTATCTTGCTAGGCAAGCCCAAGGTCGAGCTAGCCGAACTTCCTGCCCTGATTAAATTACATTTCCCCAAAAACCCCAAGTGA

Coding sequence (CDS)

ATGCTGCCACAACGGTTGAAGACGACCATTACAGATAACCCAAAGAAGCTTGCCAACTTGATTGATCTCGTAAACCTTCCTTCAACTCTCAGAGACTTTGTGGGACAGTCCCAAATTTCTCGTCTGGGCTGTTTCAAATGTGTGTGGTCTTATATCAAAACCAACAATCTTCAGGATCCGACCAACAAGAATGTGGTCATTTGTGATGAGAAGTTAAAGAGTATCTTGCTAGGCAAGCCCAAGGTCGAGCTAGCCGAACTTCCTGCCCTGATTAAATTACATTTCCCCAAAAACCCCAAGTGA

Protein sequence

MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK

Homology

[Close]

BLAST of Lcy11g014290 vs. ExPASy Swiss-Prot
Match: O74503 (Upstream activation factor subunit spp27 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=spp27 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 2.4e-07
Identity = 23/52 (44.23%), Postives = 35/52 (67.31%), Query Frame = 0


Query: 24  VNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSI 76
           + L   L +F+G  Q+SR    K +W YIK ++LQDP +K  ++CD+KLKS+
Sbjct: 121 MKLSPKLAEFLGLEQLSRPQTVKKLWEYIKAHDLQDPNDKRTILCDDKLKSV 172

[Close]

BLAST of Lcy11g014290 vs. ExPASy Swiss-Prot
Match: Q08747 (Upstream activation factor subunit UAF30 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=UAF30 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 5.4e-07
Identity = 29/97 (29.90%), Postives = 55/97 (56.70%), Query Frame = 0


Query: 4   QRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQDPTNK 63
           ++ K T++ +P         V L  +L   +G+ +++R    + +W+YIK +NLQ+P NK
Sbjct: 108 EKKKGTVSKSPISTRK----VTLSKSLASLLGEHELTRTEVVRRLWAYIKAHNLQNPNNK 167

Query: 64  NVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK 101
             ++CDEKL+ ++LGK    + E+  ++  H  +  K
Sbjct: 168 KEILCDEKLE-LILGK-STNMFEMHKILASHMTEPKK 198

[Close]

BLAST of Lcy11g014290 vs. ExPASy Swiss-Prot
Match: Q05024 (Protein TRI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TRI1 PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 7.8e-06
Identity = 26/83 (31.33%), Postives = 48/83 (57.83%), Query Frame = 0


Query: 12  DNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEK 71
           D+P   +  +  V L + L+ F+G  ++ R    K +W YIK ++LQ+P ++  ++CDEK
Sbjct: 112 DSPDSNSISVRKVLLSAPLQKFLGSEELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEK 171

Query: 72  LKSILLGKPKVELAELPALIKLH 95
           ++ I  GK K+ +  +  L+  H
Sbjct: 172 MEPI-FGK-KMTMFSMNKLLTKH 192

[Close]

BLAST of Lcy11g014290 vs. ExPASy TrEMBL
Match: A0A6J1ELR1 (upstream activation factor subunit UAF30 OS=Cucurbita moschata OX=3662 GN=LOC111435564 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 6.1e-46
Identity = 94/100 (94.00%), Postives = 97/100 (97.00%), Query Frame = 0


Query: 1   MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQDP 60
           MLPQR+KT ITDNPKKLANLIDLVNLPSTLR+FVGQSQISRLGCFK VWSYIKTNNLQDP
Sbjct: 1   MLPQRMKTAITDNPKKLANLIDLVNLPSTLREFVGQSQISRLGCFKYVWSYIKTNNLQDP 60

Query: 61  TNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK 101
           TNKNVVICDEKLKSILLGK K+ELAELPALIKLHFPKNPK
Sbjct: 61  TNKNVVICDEKLKSILLGKSKIELAELPALIKLHFPKNPK 100

[Close]

BLAST of Lcy11g014290 vs. ExPASy TrEMBL
Match: A0A6J1HY33 (upstream activation factor subunit UAF30 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111467287 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.0e-45
Identity = 94/100 (94.00%), Postives = 97/100 (97.00%), Query Frame = 0


Query: 1   MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQDP 60
           MLPQR+KT ITDNPKKLANLIDLVNLPSTLR+FVGQSQISRLGCFK VWSYIKTNNLQDP
Sbjct: 1   MLPQRMKTAITDNPKKLANLIDLVNLPSTLREFVGQSQISRLGCFKYVWSYIKTNNLQDP 60

Query: 61  TNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK 101
           TNKNVVICDEKL+SILLGK KVELAELPALIKLHFPKNPK
Sbjct: 61  TNKNVVICDEKLRSILLGKSKVELAELPALIKLHFPKNPK 100

[Close]

BLAST of Lcy11g014290 vs. ExPASy TrEMBL
Match: A0A6J1HWJ0 (protein TRI1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467287 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.0e-45
Identity = 94/100 (94.00%), Postives = 97/100 (97.00%), Query Frame = 0


Query: 1   MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQDP 60
           MLPQR+KT ITDNPKKLANLIDLVNLPSTLR+FVGQSQISRLGCFK VWSYIKTNNLQDP
Sbjct: 56  MLPQRMKTAITDNPKKLANLIDLVNLPSTLREFVGQSQISRLGCFKYVWSYIKTNNLQDP 115

Query: 61  TNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK 101
           TNKNVVICDEKL+SILLGK KVELAELPALIKLHFPKNPK
Sbjct: 116 TNKNVVICDEKLRSILLGKSKVELAELPALIKLHFPKNPK 155

[Close]

BLAST of Lcy11g014290 vs. ExPASy TrEMBL
Match: A0A1S3BL41 (upstream activation factor subunit spp27 OS=Cucumis melo OX=3656 GN=LOC103491221 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 6.8e-45
Identity = 91/100 (91.00%), Postives = 96/100 (96.00%), Query Frame = 0


Query: 1   MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQDP 60
           M  +R+K  +TDNPKKLANLIDLVNLPSTLR+FVGQSQISRLGCFKCVWSYIKTNNLQDP
Sbjct: 1   MTIRRMKMAMTDNPKKLANLIDLVNLPSTLREFVGQSQISRLGCFKCVWSYIKTNNLQDP 60

Query: 61  TNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK 101
           TNKNVV+CDEKLKSILLGKPKVELAELPALIKLHFPKNPK
Sbjct: 61  TNKNVVVCDEKLKSILLGKPKVELAELPALIKLHFPKNPK 100

[Close]

BLAST of Lcy11g014290 vs. ExPASy TrEMBL
Match: A0A151SBL4 (Upstream activation factor subunit UAF30 OS=Cajanus cajan OX=3821 GN=KK1_025905 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 2.6e-44
Identity = 89/100 (89.00%), Postives = 95/100 (95.00%), Query Frame = 0


Query: 1   MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQDP 60
           MLPQR+K  ITDNPKKLANLIDL+NLPSTLR+FVGQSQISRLGCFKCVWSYIKTNNLQDP
Sbjct: 1   MLPQRMKKAITDNPKKLANLIDLINLPSTLREFVGQSQISRLGCFKCVWSYIKTNNLQDP 60

Query: 61  TNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK 101
            NKNVV CDEKLKSILLGKP+V+LAELPALIK+HFPK PK
Sbjct: 61  NNKNVVNCDEKLKSILLGKPQVDLAELPALIKMHFPKEPK 100

[Close]

BLAST of Lcy11g014290 vs. NCBI nr
Match: XP_038882021.1 (upstream activation factor subunit spp27 [Benincasa hispida])

HSP 1 Score: 196.8 bits (499), Expect = 8.8e-47
Identity = 95/100 (95.00%), Postives = 98/100 (98.00%), Query Frame = 0


Query: 1   MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQDP 60
           MLP+R+K  ITDNPKKLANLIDLVNLPSTLR+FVGQSQISRLGCFKCVWSYIKTNNLQDP
Sbjct: 1   MLPKRMKMAITDNPKKLANLIDLVNLPSTLREFVGQSQISRLGCFKCVWSYIKTNNLQDP 60

Query: 61  TNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK 101
           TNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK
Sbjct: 61  TNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK 100

[Close]

BLAST of Lcy11g014290 vs. NCBI nr
Match: XP_022928748.1 (upstream activation factor subunit UAF30 [Cucurbita moschata] >XP_022928749.1 upstream activation factor subunit UAF30 [Cucurbita moschata])

HSP 1 Score: 193.0 bits (489), Expect = 1.3e-45
Identity = 94/100 (94.00%), Postives = 97/100 (97.00%), Query Frame = 0


Query: 1   MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQDP 60
           MLPQR+KT ITDNPKKLANLIDLVNLPSTLR+FVGQSQISRLGCFK VWSYIKTNNLQDP
Sbjct: 1   MLPQRMKTAITDNPKKLANLIDLVNLPSTLREFVGQSQISRLGCFKYVWSYIKTNNLQDP 60

Query: 61  TNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK 101
           TNKNVVICDEKLKSILLGK K+ELAELPALIKLHFPKNPK
Sbjct: 61  TNKNVVICDEKLKSILLGKSKIELAELPALIKLHFPKNPK 100

[Close]

BLAST of Lcy11g014290 vs. NCBI nr
Match: KAG6603170.1 (hypothetical protein SDJN03_03779, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 193.0 bits (489), Expect = 1.3e-45
Identity = 94/100 (94.00%), Postives = 97/100 (97.00%), Query Frame = 0


Query: 1   MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQDP 60
           MLPQR+KT ITDNPKKLANLIDLVNLPSTLR+FVGQSQISRLGCFK VWSYIKTNNLQDP
Sbjct: 31  MLPQRMKTAITDNPKKLANLIDLVNLPSTLREFVGQSQISRLGCFKYVWSYIKTNNLQDP 90

Query: 61  TNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK 101
           TNKNVVICDEKLKSILLGK K+ELAELPALIKLHFPKNPK
Sbjct: 91  TNKNVVICDEKLKSILLGKSKIELAELPALIKLHFPKNPK 130

[Close]

BLAST of Lcy11g014290 vs. NCBI nr
Match: XP_022967914.1 (upstream activation factor subunit UAF30 isoform X2 [Cucurbita maxima] >XP_022967915.1 upstream activation factor subunit UAF30 isoform X2 [Cucurbita maxima])

HSP 1 Score: 192.2 bits (487), Expect = 2.2e-45
Identity = 94/100 (94.00%), Postives = 97/100 (97.00%), Query Frame = 0


Query: 1   MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQDP 60
           MLPQR+KT ITDNPKKLANLIDLVNLPSTLR+FVGQSQISRLGCFK VWSYIKTNNLQDP
Sbjct: 1   MLPQRMKTAITDNPKKLANLIDLVNLPSTLREFVGQSQISRLGCFKYVWSYIKTNNLQDP 60

Query: 61  TNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK 101
           TNKNVVICDEKL+SILLGK KVELAELPALIKLHFPKNPK
Sbjct: 61  TNKNVVICDEKLRSILLGKSKVELAELPALIKLHFPKNPK 100

[Close]

BLAST of Lcy11g014290 vs. NCBI nr
Match: XP_022967913.1 (protein TRI1 isoform X1 [Cucurbita maxima])

HSP 1 Score: 192.2 bits (487), Expect = 2.2e-45
Identity = 94/100 (94.00%), Postives = 97/100 (97.00%), Query Frame = 0


Query: 1   MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQDP 60
           MLPQR+KT ITDNPKKLANLIDLVNLPSTLR+FVGQSQISRLGCFK VWSYIKTNNLQDP
Sbjct: 56  MLPQRMKTAITDNPKKLANLIDLVNLPSTLREFVGQSQISRLGCFKYVWSYIKTNNLQDP 115

Query: 61  TNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK 101
           TNKNVVICDEKL+SILLGK KVELAELPALIKLHFPKNPK
Sbjct: 116 TNKNVVICDEKLRSILLGKSKVELAELPALIKLHFPKNPK 155

[Close]

BLAST of Lcy11g014290 vs. TAIR 10
Match: AT4G26810.1 (SWIB/MDM2 domain superfamily protein )

HSP 1 Score: 174.5 bits (441), Expect = 4.3e-44
Identity = 86/100 (86.00%), Postives = 90/100 (90.00%), Query Frame = 0


Query: 1   MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQDP 60
           MLPQRLK  ITDNPKKL NLIDLVNLPSTLR+FVGQSQISRLGCF  VWSYIKTNNLQDP
Sbjct: 1   MLPQRLKKAITDNPKKLGNLIDLVNLPSTLRNFVGQSQISRLGCFMRVWSYIKTNNLQDP 60

Query: 61  TNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK 101
            NKNVVICDEKLKSILLGK +VEL +LP+LIKLHFPK  K
Sbjct: 61  KNKNVVICDEKLKSILLGKQRVELVDLPSLIKLHFPKEQK 100

[Close]

BLAST of Lcy11g014290 vs. TAIR 10
Match: AT4G26810.2 (SWIB/MDM2 domain superfamily protein )

HSP 1 Score: 174.5 bits (441), Expect = 4.3e-44
Identity = 86/100 (86.00%), Postives = 90/100 (90.00%), Query Frame = 0


Query: 1   MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQDP 60
           MLPQRLK  ITDNPKKL NLIDLVNLPSTLR+FVGQSQISRLGCF  VWSYIKTNNLQDP
Sbjct: 1   MLPQRLKKAITDNPKKLGNLIDLVNLPSTLRNFVGQSQISRLGCFMRVWSYIKTNNLQDP 60

Query: 61  TNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK 101
            NKNVVICDEKLKSILLGK +VEL +LP+LIKLHFPK  K
Sbjct: 61  KNKNVVICDEKLKSILLGKQRVELVDLPSLIKLHFPKEQK 100

[Close]

BLAST of Lcy11g014290 vs. TAIR 10
Match: AT2G35605.1 (SWIB/MDM2 domain superfamily protein )

HSP 1 Score: 78.2 bits (191), Expect = 4.2e-15
Identity = 33/79 (41.77%), Postives = 52/79 (65.82%), Query Frame = 0


Query: 20  LIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGK 79
           ++ +V +   L +F+G++++SR    K +W YIK NNLQ+P NK  ++CDE+LK+I  GK
Sbjct: 30  ILKVVPVSKPLANFIGENEVSRTTAVKKIWEYIKLNNLQNPVNKREILCDEQLKTIFSGK 89

Query: 80  PKVELAELPALIKLHFPKN 99
             V   E+  L+  HFPK+
Sbjct: 90  DTVGFLEISKLLSQHFPKS 108

[Close]

BLAST of Lcy11g014290 vs. TAIR 10
Match: AT1G31760.1 (SWIB/MDM2 domain superfamily protein )

HSP 1 Score: 70.9 bits (172), Expect = 6.7e-13
Identity = 31/69 (44.93%), Postives = 45/69 (65.22%), Query Frame = 0


Query: 30  LRDFVGQSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPA 89
           L  F G+ +++R    K VW Y+K +NLQ+P NK  + CD+KLK+I  GK KV + E+  
Sbjct: 43  LASFAGERELTRGSALKKVWEYVKLHNLQNPANKKEIHCDDKLKTIFDGKDKVGITEIMK 102

Query: 90  LIKLHFPKN 99
           L+  HFPK+
Sbjct: 103 LLSPHFPKS 111

[Close]

BLAST of Lcy11g014290 vs. TAIR 10
Match: AT4G34290.1 (SWIB/MDM2 domain superfamily protein )

HSP 1 Score: 67.0 bits (162), Expect = 9.7e-12
Identity = 31/66 (46.97%), Postives = 42/66 (63.64%), Query Frame = 0


Query: 30  LRDFVGQSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPA 89
           ++D VG  +I R    K +W+YIK ++LQDP NK  ++CDEKLK I  GK +V   E+  
Sbjct: 78  MQDVVGVPEIPRTQALKRIWAYIKEHDLQDPQNKRDILCDEKLKKIFEGKERVGFLEIAK 137

Query: 90  LIKLHF 96
           LI  HF
Sbjct: 138 LIGPHF 143

The following BLAST results are available for this feature:

BLAST of Lcy11g014290 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O74503	2.4e-07	44.23	Upstream activation factor subunit spp27 OS=Schizosaccharomyces pombe (strain 97...	[more]
Q08747	5.4e-07	29.90	Upstream activation factor subunit UAF30 OS=Saccharomyces cerevisiae (strain ATC...	[more]
Q05024	7.8e-06	31.33	Protein TRI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 ...	[more]

BLAST of Lcy11g014290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ELR1	6.1e-46	94.00	upstream activation factor subunit UAF30 OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1HY33	1.0e-45	94.00	upstream activation factor subunit UAF30 isoform X2 OS=Cucurbita maxima OX=3661 ...	[more]
A0A6J1HWJ0	1.0e-45	94.00	protein TRI1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467287 PE=4 SV=1	[more]
A0A1S3BL41	6.8e-45	91.00	upstream activation factor subunit spp27 OS=Cucumis melo OX=3656 GN=LOC103491221...	[more]
A0A151SBL4	2.6e-44	89.00	Upstream activation factor subunit UAF30 OS=Cajanus cajan OX=3821 GN=KK1_025905 ...	[more]

BLAST of Lcy11g014290 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882021.1	8.8e-47	95.00	upstream activation factor subunit spp27 [Benincasa hispida]	[more]
XP_022928748.1	1.3e-45	94.00	upstream activation factor subunit UAF30 [Cucurbita moschata] >XP_022928749.1 up...	[more]
KAG6603170.1	1.3e-45	94.00	hypothetical protein SDJN03_03779, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022967914.1	2.2e-45	94.00	upstream activation factor subunit UAF30 isoform X2 [Cucurbita maxima] >XP_02296...	[more]
XP_022967913.1	2.2e-45	94.00	protein TRI1 isoform X1 [Cucurbita maxima]	[more]

BLAST of Lcy11g014290 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G26810.1	4.3e-44	86.00	SWIB/MDM2 domain superfamily protein	[more]
AT4G26810.2	4.3e-44	86.00	SWIB/MDM2 domain superfamily protein	[more]
AT2G35605.1	4.2e-15	41.77	SWIB/MDM2 domain superfamily protein	[more]
AT1G31760.1	6.7e-13	44.93	SWIB/MDM2 domain superfamily protein	[more]
AT4G34290.1	9.7e-12	46.97	SWIB/MDM2 domain superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019835	SWIB domain	SMART	SM00151	swib_2	coord: 20..100 e-value: 1.0E-11 score: 55.0
IPR036885	SWIB/MDM2 domain superfamily	GENE3D	1.10.245.10	SWIB/MDM2 domain	coord: 15..100 e-value: 1.2E-21 score: 78.5
IPR036885	SWIB/MDM2 domain superfamily	SUPERFAMILY	47592	SWIB/MDM2 domain	coord: 13..98
IPR003121	SWIB/MDM2 domain	PFAM	PF02201	SWIB	coord: 24..95 e-value: 1.2E-22 score: 79.6
IPR003121	SWIB/MDM2 domain	PROSITE	PS51925	SWIB_MDM2	coord: 19..97 score: 18.151392
None	No IPR available	PANTHER	PTHR13844:SF45	OS09G0133000 PROTEIN	coord: 2..100
None	No IPR available	PANTHER	PTHR13844	SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D	coord: 2..100
None	No IPR available	CDD	cd10567	SWIB-MDM2_like	coord: 24..95 e-value: 2.71321E-22 score: 80.2801

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g014290.1	Lcy11g014290.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus