Lcy11g013710 (gene) Sponge gourd (P93075) v1

Overview
NameLcy11g013710
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description2-iminobutanoate/2-iminopropanoate deaminase-like
LocationChr11: 22099296 .. 22102066 (+)
RNA-Seq ExpressionLcy11g013710
SyntenyLcy11g013710
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGAGACAAGACAAGGAATCAATTAAGAGGCACACACATATCACATATGGCTTGGTGCGCGGCTCAGAACCTCCGAATTCCTGCCCCCGACGCCATTTCACGGCGGCGCTCCGTCACTCCCTCAGCCGGCACCGCCCTGTCCATGTGGCGGCAGCCTTCATCGGTTCCATCTGTTTCAAACCGCAAAATGCCCTTCAAATGCCTTGCCATTGCCAAATGTGCTGGTACTACGCACTCACTTCTATCTCTTTCTGTTTCGTTCATCACAAAATTTAGGCCATTTCATGATAACCATTCCGTTTTTTAAAATTAAACTTGTTTTTTTTTTTTTTCAATTTCTTTATGATGGATTCATTTTTGTTGACACATTTGAATTCCTAACCAAATTCCAAAAATAAAAACAAGTTTTTGAAAAATATTTTTTTTAGTTTTGAAAACTTGACTTGGTTTCTGAAAACATGGTAAAAAGGTAGAGAAATTCATAGGTGTAAGTAGTGTTTTTAAGCCTAATTTTTAAAAGTAAAAAGGTTATCAAACGGGGTCTTAATTTTCCCACCCGATTGGATTTCTATTTCTTATCTGCATAATATTAAACATCAATTTAATATTTCTTTTGTAATTTAATCAACAAAATACTGAACATCAATCTAATTTAATTCTAAAAGATATAATTAATTTTTTTTTTTTGACAACATGTAGTGGTGGGGGATTGAACCTCTAACCTCTTGGTCGGAGTACAAGCTTTATGCTAGTTTTTTTTTTCCTTTCTTTCTAAATAAGTTTTATGCCAGTTGAGTCATGCTCTTGTTGACAGATATAATTAAATTTTAGATACGAAATTAATGGAAAAAAATTGAATCATATTTTACGGCATTTCCATACATCCAAGTACAACATAACGTTGTTGAACTAAAAGAAACTACCAATTATATTTCCATCCTACTTCATAGTCTAAGATAAAAATTATGAAAAAAAAAAACAATTTCTTCCCTTGAAGTTAATAATAGACGAGTGTGTGGTAGTGAAAAAATACAGTGGTGGTCTGCCAGTGTGCGATGCAGTAGAGAAGGAGATAAGGATAGAATGTAAAAATGACATTCTATTTCTTTTCAGATCCTAATTAATATAAAATCATTTAATTTCCTTTCAATTTTAGATGTGAAACAGAGCATAACAGATTTTTTCACCCGTTAATATAAATGTCTTTTATGGCAGATATCACAGCTATTGTCACTGATGAGGCTCCAGAAGCATTAGGGCCATATTCTCAGGGCATCATAGCCAACAACTTTATCTGCGTGTCTGGCTCCCTAGGCCTCGTTCCCGAGGTAGCTTCGTCACTTTATCATTGTAATTTATCCCTTCATCTTGTTGTACGAGATTGTCTAATCTGAACATAACTCAAATGATTATGTCCAATTACCTATCCTTATAGAGTCGTAGGTTTGAATTCCATGCACGTTTTATGCGCCCCAATTGAGTGTGTATGTTTATGGTTGAATGCAGACAGGGGAATTGATCTCAGATGATGTTGGAGAGCAAACTGAACAGGTAATTTTATTTTATTTTATTTTTTCCCATTAGATTTTGATGATTAAATCTGCTTGTAATGTTGTCCTTTGTAGACCAAATTTCTGATCTAAAAAACAAAATTTCTAAGTAAATGAAATATCATGCAGGCCCTAAAAAATGTAGGTGCAATATTGAGAGCTGGAGGTGCTGACTATAAGTGTGTGGTTAAGACAACTATTATGTATGAAATCTTGACCTCTTTTTACTTTTACCATCTTTTAACATTTTGAGAAATCATCTTGTGGTTTTGTTTGGGAAGTTTATTACCATTTAAGATAAAACAATTTCACACATCCTATACTATTTATTTATGCCTATATATATATTTTTTTTTTCCAAAGATATACAATTCTAATTTCTTCACAATCCTTTCTTGCAGGTTGGCTGATGTAGCAGACTTTGCATTAGTCAATGACATTTATGCTAAGTGTAAGTTCTTTTCAACCCAACCTCTAATCCATTTCTGCTATAATATGCTCAACCTTTATATATATATAGTTCAATTTTAGTTTCGAGAATATAATTATTTTGAGTGAATTTGAAAATTAAAACATCGACGAATCATGATAGTTTCTTTTCGGTATATAATTGTGATTGGCAGATGAAACTACCTATTTTTGTTGTTACTCGTCAAATTATCTCATATATTTTTAATTTTTATTTAAGTAAATTATATATTTTGCTTTGATATGTTTAGAGAACAAGTTGAATTTGAGACGACTCCCATTTTAGCGAAGTTGTTTTTTCTACAGACTTTAATAGCTCTCCTACACCAGCTCGATCGACATTTCAGGCTGGAGCATTGCCCAAAAATGCTAAGATTGAAATCGATGCAATAGCTGCGATTTAAATTGTGGTATAATTTCAGGCAGCTAGTTTCAAGGCATCATCATAAATTTAATAAGTTGGAGATAGCTAATAAAAGGAACATCCCAAACTTTCGATTTGGTTTGTGTATTCCCTAAGACTTTCTTGTCACAACATTGTAACCACTTCACTCTCACCCATATGCTTTTTAAGCTGGGGAAATAGAGCTGAATAAAATATATTGTTGCCTTGGATATGTGGTGTCCTTTTCATGCTACCATATTTACCTATGCAAATTTTCGGGTTAATGATGTTAATTTCATAGTCATTTGTGAGTCTTGTAAGATGGAATTGCAGACGCTAAAGAACAAGGTGAATAAGGTTGCCTACCA

mRNA sequence

GTGAGACAAGACAAGGAATCAATTAAGAGGCACACACATATCACATATGGCTTGGTGCGCGGCTCAGAACCTCCGAATTCCTGCCCCCGACGCCATTTCACGGCGGCGCTCCGTCACTCCCTCAGCCGGCACCGCCCTGTCCATGTGGCGGCAGCCTTCATCGGTTCCATCTGTTTCAAACCGCAAAATGCCCTTCAAATGCCTTGCCATTGCCAAATGTGCTGATATCACAGCTATTGTCACTGATGAGGCTCCAGAAGCATTAGGGCCATATTCTCAGGGCATCATAGCCAACAACTTTATCTGCGTGTCTGGCTCCCTAGGCCTCGTTCCCGAGACAGGGGAATTGATCTCAGATGATGTTGGAGAGCAAACTGAACAGGCCCTAAAAAATGTAGGTGCAATATTGAGAGCTGGAGGTGCTGACTATAAGTGTGTGGTTAAGACAACTATTATGTTGGCTGATGTAGCAGACTTTGCATTAGTCAATGACATTTATGCTAAGTACTTTAATAGCTCTCCTACACCAGCTCGATCGACATTTCAGGCTGGAGCATTGCCCAAAAATGCTAAGATTGAAATCGATGCAATAGCTGCGATTTAAATTGTGGTATAATTTCAGGCAGCTAGTTTCAAGGCATCATCATAAATTTAATAAGTTGGAGATAGCTAATAAAAGGAACATCCCAAACTTTCGATTTGGTTTGTGTATTCCCTAAGACTTTCTTGTCACAACATTGTAACCACTTCACTCTCACCCATATGCTTTTTAAGCTGGGGAAATAGAGCTGAATAAAATATATTGTTGCCTTGGATATGTGGTGTCCTTTTCATGCTACCATATTTACCTATGCAAATTTTCGGGTTAATGATGTTAATTTCATAGTCATTTGTGAGTCTTGTAAGATGGAATTGCAGACGCTAAAGAACAAGGTGAATAAGGTTGCCTACCA

Coding sequence (CDS)

ATGGCTTGGTGCGCGGCTCAGAACCTCCGAATTCCTGCCCCCGACGCCATTTCACGGCGGCGCTCCGTCACTCCCTCAGCCGGCACCGCCCTGTCCATGTGGCGGCAGCCTTCATCGGTTCCATCTGTTTCAAACCGCAAAATGCCCTTCAAATGCCTTGCCATTGCCAAATGTGCTGATATCACAGCTATTGTCACTGATGAGGCTCCAGAAGCATTAGGGCCATATTCTCAGGGCATCATAGCCAACAACTTTATCTGCGTGTCTGGCTCCCTAGGCCTCGTTCCCGAGACAGGGGAATTGATCTCAGATGATGTTGGAGAGCAAACTGAACAGGCCCTAAAAAATGTAGGTGCAATATTGAGAGCTGGAGGTGCTGACTATAAGTGTGTGGTTAAGACAACTATTATGTTGGCTGATGTAGCAGACTTTGCATTAGTCAATGACATTTATGCTAAGTACTTTAATAGCTCTCCTACACCAGCTCGATCGACATTTCAGGCTGGAGCATTGCCCAAAAATGCTAAGATTGAAATCGATGCAATAGCTGCGATTTAA

Protein sequence

MAWCAAQNLRIPAPDAISRRRSVTPSAGTALSMWRQPSSVPSVSNRKMPFKCLAIAKCADITAIVTDEAPEALGPYSQGIIANNFICVSGSLGLVPETGELISDDVGEQTEQALKNVGAILRAGGADYKCVVKTTIMLADVADFALVNDIYAKYFNSSPTPARSTFQAGALPKNAKIEIDAIAAI
Homology
[Close]
BLAST of Lcy11g013710 vs. ExPASy Swiss-Prot
Match: Q94JQ4 (Reactive Intermediate Deaminase A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RIDA PE=1 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.8e-40
Identity = 96/189 (50.79%), Postives = 127/189 (67.20%), Query Frame = 0 

Query: 1   MAWCAAQNLRIPAPDAISRRRSV-TP--SAGTALSMWRQPSSVPSVSNRKMPFKCLAI-A 60
           M W   +++  P  D  +  RS  TP  +AG   + +    S+  +S+R  PF  L++ A
Sbjct: 1   MTWSVFRSINTPTLDLSTALRSTRTPLVAAGVGCATF-AGVSLFRMSSRSPPFASLSVSA 60

Query: 61  KCADITAIVTDEAPEALGPYSQGIIANNFICVSGSLGLVPETGELISDDVGEQTEQALKN 120
                  + T++AP ALGPYSQ I ANN + +SG LGL+PETG+ +S+ V +QTEQ LKN
Sbjct: 61  SSVKKEVVSTEKAPAALGPYSQAIKANNLVFLSGVLGLIPETGKFVSESVEDQTEQVLKN 120

Query: 121 VGAILRAGGADYKCVVKTTIMLADVADFALVNDIYAKYFNSSPTPARSTFQAGALPKNAK 180
           +G IL+A GADY  VVKTTIMLAD+ADF  VN+IYAKYF  +P+PARST+Q  ALP NAK
Sbjct: 121 MGEILKASGADYSSVVKTTIMLADLADFKTVNEIYAKYF-PAPSPARSTYQVAALPLNAK 180

Query: 181 IEIDAIAAI 186
           IEI+ IA +
Sbjct: 181 IEIECIATL 187

[Close]
BLAST of Lcy11g013710 vs. ExPASy Swiss-Prot
Match: Q10121 (RutC family protein C23G10.2 OS=Caenorhabditis elegans OX=6239 GN=C23G10.2 PE=3 SV=3)

HSP 1 Score: 130.2 bits (326), Expect = 2.4e-29
Identity = 69/133 (51.88%), Postives = 94/133 (70.68%), Query Frame = 0 

Query: 51  KCLAIAKCADITAIVTDEAPEALGPYSQGIIANNFICVSGSLGLVPETGELISDDVGEQT 110
           K L +A+      I +  AP A+GPYSQ + A N I +SGSLGL P+TG+L  + V EQT
Sbjct: 31  KVLDMAQKVTRQIISSANAPGAIGPYSQAVRAGNTIYLSGSLGLDPKTGDL-KEGVVEQT 90

Query: 111 EQALKNVGAILRAGGADYKCVVKTTIMLADVADFALVNDIYAKYFNSSPTPARSTFQAGA 170
            Q+LKN+G +L+A GADY  VVKTT++L ++ADFA VN++Y +YF  SP PAR+ +Q  A
Sbjct: 91  HQSLKNLGEVLKAAGADYGNVVKTTVLLQNIADFAAVNEVYGQYF-KSPYPARAAYQVAA 150

Query: 171 LPKNAKIEIDAIA 184
           LPK   +EI+A+A
Sbjct: 151 LPKGGLVEIEAVA 161

[Close]
BLAST of Lcy11g013710 vs. ExPASy Swiss-Prot
Match: P52758 (2-iminobutanoate/2-iminopropanoate deaminase OS=Homo sapiens OX=9606 GN=RIDA PE=1 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 9.3e-29
Identity = 61/120 (50.83%), Postives = 89/120 (74.17%), Query Frame = 0 

Query: 64  IVTDEAPEALGPYSQGIIANNFICVSGSLGLVPETGELISDDVGEQTEQALKNVGAILRA 123
           I T +AP A+GPYSQ ++ +  I +SG +G+ P +G+L+S  V E+ +QALKN+G IL+A
Sbjct: 9   ISTAKAPGAIGPYSQAVLVDRTIYISGQIGMDPSSGQLVSGGVAEEAKQALKNMGEILKA 68

Query: 124 GGADYKCVVKTTIMLADVADFALVNDIYAKYFNSSPTPARSTFQAGALPKNAKIEIDAIA 183
            G D+  VVKTT++LAD+ DF  VN+IY +YF S+  PAR+ +Q  ALPK ++IEI+A+A
Sbjct: 69  AGCDFTNVVKTTVLLADINDFNTVNEIYKQYFKSN-FPARAAYQVAALPKGSRIEIEAVA 127

[Close]
BLAST of Lcy11g013710 vs. ExPASy Swiss-Prot
Match: Q3T114 (2-iminobutanoate/2-iminopropanoate deaminase OS=Bos taurus OX=9913 GN=RIDA PE=2 SV=3)

HSP 1 Score: 126.7 bits (317), Expect = 2.7e-28
Identity = 60/120 (50.00%), Postives = 86/120 (71.67%), Query Frame = 0 

Query: 64  IVTDEAPEALGPYSQGIIANNFICVSGSLGLVPETGELISDDVGEQTEQALKNVGAILRA 123
           I T +AP A+GPYSQ ++ +  I +SG LG+ P +G+L+   V E+ +QAL N+G IL+A
Sbjct: 9   ISTAKAPAAIGPYSQAVLVDRTIYISGQLGMDPASGQLVPGGVAEEAKQALTNIGEILKA 68

Query: 124 GGADYKCVVKTTIMLADVADFALVNDIYAKYFNSSPTPARSTFQAGALPKNAKIEIDAIA 183
            G D+  VVK T++LAD+ DF+ VND+Y +YF SS  PAR+ +Q  ALPK  ++EI+AIA
Sbjct: 69  AGCDFTNVVKATVLLADINDFSTVNDVYKQYFQSS-FPARAAYQVAALPKGGRVEIEAIA 127

[Close]
BLAST of Lcy11g013710 vs. ExPASy Swiss-Prot
Match: P80601 (2-iminobutanoate/2-iminopropanoate deaminase OS=Capra hircus OX=9925 GN=RIDA PE=1 SV=3)

HSP 1 Score: 125.6 bits (314), Expect = 6.0e-28
Identity = 60/120 (50.00%), Postives = 86/120 (71.67%), Query Frame = 0 

Query: 64  IVTDEAPEALGPYSQGIIANNFICVSGSLGLVPETGELISDDVGEQTEQALKNVGAILRA 123
           I T +AP A+GPYSQ ++ +  I +SG LG+ P +G+L+   V E+ +QAL N+G IL+A
Sbjct: 9   ISTAKAPAAIGPYSQAVLVDRTIYISGQLGMDPASGQLVPGGVVEEAKQALTNIGEILKA 68

Query: 124 GGADYKCVVKTTIMLADVADFALVNDIYAKYFNSSPTPARSTFQAGALPKNAKIEIDAIA 183
            G D+  VVK T++LAD+ DF+ VND+Y +YF SS  PAR+ +Q  ALPK  ++EI+AIA
Sbjct: 69  AGCDFTNVVKATVLLADINDFSAVNDVYKQYFQSS-FPARAAYQVAALPKGGRVEIEAIA 127

[Close]
BLAST of Lcy11g013710 vs. ExPASy TrEMBL
Match: A0A6J1JD57 (2-iminobutanoate/2-iminopropanoate deaminase-like OS=Cucurbita maxima OX=3661 GN=LOC111483310 PE=3 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 9.8e-74
Identity = 143/185 (77.30%), Postives = 160/185 (86.49%), Query Frame = 0 

Query: 1   MAWCAAQNLRIPAPDAISRRRSVTPSAGTALSMWRQPSSVPSVSNRKMPFKCLAIAKCAD 60
           MA+C A   +IPA + ISR R+VTPS G A+S+WR+PSS+PS+SNR M FKC AI+KC D
Sbjct: 1   MAYCTAHTFQIPASNVISRPRTVTPSVGAAVSLWRRPSSIPSISNRNMSFKCHAISKCDD 60

Query: 61  ITAIVTDEAPEALGPYSQGIIANNFICVSGSLGLVPETGELISDDVGEQTEQALKNVGAI 120
           IT I T+EAPEALGPYSQGIIANNFI VSGSLGL+PETGELISD VGEQ EQALKN+GAI
Sbjct: 61  ITTIETNEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGEQAEQALKNIGAI 120

Query: 121 LRAGGADYKCVVKTTIMLADVADFALVNDIYAKYFNSSPTPARSTFQAGALPKNAKIEID 180
           L+AGGADY  VVKTTIMLADVADFALVN IYA+YF+  P PARSTFQAGALPKNAKIEID
Sbjct: 121 LKAGGADYNRVVKTTIMLADVADFALVNQIYARYFSEYPAPARSTFQAGALPKNAKIEID 180

Query: 181 AIAAI 186
           AIA +
Sbjct: 181 AIAVV 185

[Close]
BLAST of Lcy11g013710 vs. ExPASy TrEMBL
Match: A0A6J1F0U9 (2-iminobutanoate/2-iminopropanoate deaminase-like OS=Cucurbita moschata OX=3662 GN=LOC111438474 PE=3 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 4.9e-73
Identity = 140/185 (75.68%), Postives = 161/185 (87.03%), Query Frame = 0 

Query: 1   MAWCAAQNLRIPAPDAISRRRSVTPSAGTALSMWRQPSSVPSVSNRKMPFKCLAIAKCAD 60
           MA+C +   +IPA + ISR R+VTPS G A+S+WR+PSS+PS+SNR M FKC AI+KC D
Sbjct: 1   MAYCTSHTFQIPASNVISRPRTVTPSVGAAVSLWRRPSSIPSISNRNMSFKCHAISKCND 60

Query: 61  ITAIVTDEAPEALGPYSQGIIANNFICVSGSLGLVPETGELISDDVGEQTEQALKNVGAI 120
           IT I+T+EAPEALGPYSQGIIANNFI VSGSLGL+PETGELISD VG+QT QALKN+GAI
Sbjct: 61  ITPIITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTVQALKNIGAI 120

Query: 121 LRAGGADYKCVVKTTIMLADVADFALVNDIYAKYFNSSPTPARSTFQAGALPKNAKIEID 180
           L+AGGADY  VVKTTIMLADVADFALVN+IYA+YF+  P PARSTFQ GALPKNAKIEID
Sbjct: 121 LKAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQVGALPKNAKIEID 180

Query: 181 AIAAI 186
           AIA +
Sbjct: 181 AIALV 185

[Close]
BLAST of Lcy11g013710 vs. ExPASy TrEMBL
Match: A0A6J1EVW2 (2-iminobutanoate/2-iminopropanoate deaminase-like OS=Cucurbita moschata OX=3662 GN=LOC111438479 PE=3 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.7e-71
Identity = 138/185 (74.59%), Postives = 159/185 (85.95%), Query Frame = 0 

Query: 1   MAWCAAQNLRIPAPDAISRRRSVTPSAGTALSMWRQPSSVPSVSNRKMPFKCLAIAKCAD 60
           MA+C+A + +IPA + ISR R+VTPS G ++S+WR+PSS+PS+SNR M FKC AI+KC D
Sbjct: 1   MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNRNMSFKCHAISKCRD 60

Query: 61  ITAIVTDEAPEALGPYSQGIIANNFICVSGSLGLVPETGELISDDVGEQTEQALKNVGAI 120
           I  I T EAPEALGPYSQGIIANNFI VSGSLGL+PETGELISD VG+Q  QAL+N+GAI
Sbjct: 61  IIPIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQPRQALRNIGAI 120

Query: 121 LRAGGADYKCVVKTTIMLADVADFALVNDIYAKYFNSSPTPARSTFQAGALPKNAKIEID 180
           LRAGGADY  VVKTTIMLADVADFALVN+IYA+YF+  P PARSTFQ GALPKNAKIEID
Sbjct: 121 LRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEID 180

Query: 181 AIAAI 186
           AIA +
Sbjct: 181 AIALV 185

[Close]
BLAST of Lcy11g013710 vs. ExPASy TrEMBL
Match: A0RZC7 (Plastid-lipid associated protein OS=Cucumis sativus OX=3659 GN=CHRD PE=2 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.9e-69
Identity = 140/187 (74.87%), Postives = 161/187 (86.10%), Query Frame = 0 

Query: 1   MAWCAAQNLRIPAPDAISRRRSVTPSAGTALSMWRQPS-SVPSVSNRKMPFKCLAIAKC- 60
           MA  AA  L+IPA  AI+RRRS+TPSAGTA+S+WR+PS ++PS+S+ +M FKC AI+KC 
Sbjct: 1   MAMSAAHTLQIPASTAITRRRSITPSAGTAVSLWRRPSPAIPSISSHQMSFKCHAISKCT 60

Query: 61  ADITAIVTDEAPEALGPYSQGIIANNFICVSGSLGLVPETGELISDDVGEQTEQALKNVG 120
            +I  I TD APEALGPYSQGIIANN + VSGSLGL+PETG+LISDDVGEQTEQALKNVG
Sbjct: 61  TEIIGIATDNAPEALGPYSQGIIANNLVYVSGSLGLIPETGQLISDDVGEQTEQALKNVG 120

Query: 121 AILRAGGADYKCVVKTTIMLADVADFALVNDIYAKYFNSSPTPARSTFQAGALPKNAKIE 180
           AILRAGGADY  V+KTTIMLA+VADF LVN+IY KYF +SP PARSTF AGALPKNAKIE
Sbjct: 121 AILRAGGADYDRVIKTTIMLANVADFTLVNEIYGKYFPNSPAPARSTFAAGALPKNAKIE 180

Query: 181 IDAIAAI 186
           IDAIA +
Sbjct: 181 IDAIAVL 187

[Close]
BLAST of Lcy11g013710 vs. ExPASy TrEMBL
Match: A0A5D3BWQ5 (Ribonuclease UK114-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold925G00100 PE=3 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 2.5e-69
Identity = 142/187 (75.94%), Postives = 161/187 (86.10%), Query Frame = 0 

Query: 1   MAWCAAQNLRIPAPDAISRRRSVTPSAGTALSMWRQP-SSVPSVSNRKMPFKCLAIAKC- 60
           MA  AA  L+IPA  AI+R RS TPSAGTA+S+WR+P  ++PS+S+R+M FKCLAI+KC 
Sbjct: 1   MAMSAAHTLQIPASTAITRGRSFTPSAGTAVSLWRRPLPAIPSISSRQMSFKCLAISKCT 60

Query: 61  ADITAIVTDEAPEALGPYSQGIIANNFICVSGSLGLVPETGELISDDVGEQTEQALKNVG 120
            +I  I TD APEALGPYSQGIIANN + VSGSLGL+P+TGELISDDVGEQTEQALKNVG
Sbjct: 61  TEIKGIATDNAPEALGPYSQGIIANNILYVSGSLGLIPKTGELISDDVGEQTEQALKNVG 120

Query: 121 AILRAGGADYKCVVKTTIMLADVADFALVNDIYAKYFNSSPTPARSTFQAGALPKNAKIE 180
           AILRAGGADY  VVKTTIMLA+VADF LVN+IYAKYF +SP PARSTF AGALPKNAKIE
Sbjct: 121 AILRAGGADYDRVVKTTIMLANVADFTLVNEIYAKYFPNSPAPARSTFAAGALPKNAKIE 180

Query: 181 IDAIAAI 186
           IDAIA +
Sbjct: 181 IDAIAVL 187

[Close]
BLAST of Lcy11g013710 vs. NCBI nr
Match: XP_023552960.1 (2-iminobutanoate/2-iminopropanoate deaminase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 286.6 bits (732), Expect = 1.6e-73
Identity = 142/185 (76.76%), Postives = 161/185 (87.03%), Query Frame = 0 

Query: 1   MAWCAAQNLRIPAPDAISRRRSVTPSAGTALSMWRQPSSVPSVSNRKMPFKCLAIAKCAD 60
           MA+C A   +IPA + ISR R+VTPS G A+S+WR+PSS+PS+SNR M FKC AI++C D
Sbjct: 1   MAYCTAHTFQIPASNVISRPRTVTPSVGAAVSLWRRPSSIPSISNRNMSFKCHAISECDD 60

Query: 61  ITAIVTDEAPEALGPYSQGIIANNFICVSGSLGLVPETGELISDDVGEQTEQALKNVGAI 120
           IT I T+EAPEALGPYSQGIIANNFI VSGSLGL+PETGELISD VG+QTEQALKN+GAI
Sbjct: 61  ITPIATEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTEQALKNIGAI 120

Query: 121 LRAGGADYKCVVKTTIMLADVADFALVNDIYAKYFNSSPTPARSTFQAGALPKNAKIEID 180
           L+AGG DY  VVKTTIMLADVADFALVN+IYAKYF+  P PARSTFQAGALPKNAKIEID
Sbjct: 121 LKAGGVDYNRVVKTTIMLADVADFALVNEIYAKYFSEYPAPARSTFQAGALPKNAKIEID 180

Query: 181 AIAAI 186
           AIA +
Sbjct: 181 AIAVV 185

[Close]
BLAST of Lcy11g013710 vs. NCBI nr
Match: XP_022985268.1 (2-iminobutanoate/2-iminopropanoate deaminase-like [Cucurbita maxima])

HSP 1 Score: 286.2 bits (731), Expect = 2.0e-73
Identity = 143/185 (77.30%), Postives = 160/185 (86.49%), Query Frame = 0 

Query: 1   MAWCAAQNLRIPAPDAISRRRSVTPSAGTALSMWRQPSSVPSVSNRKMPFKCLAIAKCAD 60
           MA+C A   +IPA + ISR R+VTPS G A+S+WR+PSS+PS+SNR M FKC AI+KC D
Sbjct: 1   MAYCTAHTFQIPASNVISRPRTVTPSVGAAVSLWRRPSSIPSISNRNMSFKCHAISKCDD 60

Query: 61  ITAIVTDEAPEALGPYSQGIIANNFICVSGSLGLVPETGELISDDVGEQTEQALKNVGAI 120
           IT I T+EAPEALGPYSQGIIANNFI VSGSLGL+PETGELISD VGEQ EQALKN+GAI
Sbjct: 61  ITTIETNEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGEQAEQALKNIGAI 120

Query: 121 LRAGGADYKCVVKTTIMLADVADFALVNDIYAKYFNSSPTPARSTFQAGALPKNAKIEID 180
           L+AGGADY  VVKTTIMLADVADFALVN IYA+YF+  P PARSTFQAGALPKNAKIEID
Sbjct: 121 LKAGGADYNRVVKTTIMLADVADFALVNQIYARYFSEYPAPARSTFQAGALPKNAKIEID 180

Query: 181 AIAAI 186
           AIA +
Sbjct: 181 AIAVV 185

[Close]
BLAST of Lcy11g013710 vs. NCBI nr
Match: XP_023553271.1 (2-iminobutanoate/2-iminopropanoate deaminase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 285.8 bits (730), Expect = 2.7e-73
Identity = 142/185 (76.76%), Postives = 162/185 (87.57%), Query Frame = 0 

Query: 1   MAWCAAQNLRIPAPDAISRRRSVTPSAGTALSMWRQPSSVPSVSNRKMPFKCLAIAKCAD 60
           MA+C+A + +IPA + ISR R+VTPS G ++S+WR+PSS+PS+SNR M FKC AI+KC D
Sbjct: 1   MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNRNMSFKCHAISKCRD 60

Query: 61  ITAIVTDEAPEALGPYSQGIIANNFICVSGSLGLVPETGELISDDVGEQTEQALKNVGAI 120
           I  I TD+APEALGPYSQGIIANNFI VSGSLGL+PETGELISDDVGEQT QALKN+GAI
Sbjct: 61  IIPIETDKAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDDVGEQTMQALKNIGAI 120

Query: 121 LRAGGADYKCVVKTTIMLADVADFALVNDIYAKYFNSSPTPARSTFQAGALPKNAKIEID 180
           LRAGGADY  VVKTTIMLADVADFALVN+IYA+YF+  P PARSTFQ GALPKNAKIEID
Sbjct: 121 LRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSKQPFPARSTFQVGALPKNAKIEID 180

Query: 181 AIAAI 186
           AIA +
Sbjct: 181 AIALV 185

[Close]
BLAST of Lcy11g013710 vs. NCBI nr
Match: KAG6577420.1 (Reactive Intermediate Deaminase A, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 283.9 bits (725), Expect = 1.0e-72
Identity = 140/185 (75.68%), Postives = 161/185 (87.03%), Query Frame = 0 

Query: 1   MAWCAAQNLRIPAPDAISRRRSVTPSAGTALSMWRQPSSVPSVSNRKMPFKCLAIAKCAD 60
           MA+C +   +IPA + ISR R+VTPS G A+S+WR+PSS+PS+SNR M FKC AI+KC D
Sbjct: 1   MAYCTSHTFQIPASNVISRPRTVTPSVGAAVSLWRRPSSIPSISNRNMSFKCHAISKCND 60

Query: 61  ITAIVTDEAPEALGPYSQGIIANNFICVSGSLGLVPETGELISDDVGEQTEQALKNVGAI 120
           IT I+T+EAPEALGPYSQGIIANNFI VSGSLGL+PETGELISD VG+QT QALKN+GAI
Sbjct: 61  ITPIITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTVQALKNIGAI 120

Query: 121 LRAGGADYKCVVKTTIMLADVADFALVNDIYAKYFNSSPTPARSTFQAGALPKNAKIEID 180
           L+AGGADY  VVKTTIMLADVADFALVN+IYA+YF+  P PARSTFQ GALPKNAKIEID
Sbjct: 121 LKAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEID 180

Query: 181 AIAAI 186
           AIA +
Sbjct: 181 AIALV 185

[Close]
BLAST of Lcy11g013710 vs. NCBI nr
Match: XP_022932153.1 (2-iminobutanoate/2-iminopropanoate deaminase-like [Cucurbita moschata])

HSP 1 Score: 283.9 bits (725), Expect = 1.0e-72
Identity = 140/185 (75.68%), Postives = 161/185 (87.03%), Query Frame = 0 

Query: 1   MAWCAAQNLRIPAPDAISRRRSVTPSAGTALSMWRQPSSVPSVSNRKMPFKCLAIAKCAD 60
           MA+C +   +IPA + ISR R+VTPS G A+S+WR+PSS+PS+SNR M FKC AI+KC D
Sbjct: 1   MAYCTSHTFQIPASNVISRPRTVTPSVGAAVSLWRRPSSIPSISNRNMSFKCHAISKCND 60

Query: 61  ITAIVTDEAPEALGPYSQGIIANNFICVSGSLGLVPETGELISDDVGEQTEQALKNVGAI 120
           IT I+T+EAPEALGPYSQGIIANNFI VSGSLGL+PETGELISD VG+QT QALKN+GAI
Sbjct: 61  ITPIITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTVQALKNIGAI 120

Query: 121 LRAGGADYKCVVKTTIMLADVADFALVNDIYAKYFNSSPTPARSTFQAGALPKNAKIEID 180
           L+AGGADY  VVKTTIMLADVADFALVN+IYA+YF+  P PARSTFQ GALPKNAKIEID
Sbjct: 121 LKAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQVGALPKNAKIEID 180

Query: 181 AIAAI 186
           AIA +
Sbjct: 181 AIALV 185

[Close]
BLAST of Lcy11g013710 vs. TAIR 10
Match: AT3G20390.1 (endoribonuclease L-PSP family protein )

HSP 1 Score: 167.2 bits (422), Expect = 1.3e-41
Identity = 96/189 (50.79%), Postives = 127/189 (67.20%), Query Frame = 0 

Query: 1   MAWCAAQNLRIPAPDAISRRRSV-TP--SAGTALSMWRQPSSVPSVSNRKMPFKCLAI-A 60
           M W   +++  P  D  +  RS  TP  +AG   + +    S+  +S+R  PF  L++ A
Sbjct: 1   MTWSVFRSINTPTLDLSTALRSTRTPLVAAGVGCATF-AGVSLFRMSSRSPPFASLSVSA 60

Query: 61  KCADITAIVTDEAPEALGPYSQGIIANNFICVSGSLGLVPETGELISDDVGEQTEQALKN 120
                  + T++AP ALGPYSQ I ANN + +SG LGL+PETG+ +S+ V +QTEQ LKN
Sbjct: 61  SSVKKEVVSTEKAPAALGPYSQAIKANNLVFLSGVLGLIPETGKFVSESVEDQTEQVLKN 120

Query: 121 VGAILRAGGADYKCVVKTTIMLADVADFALVNDIYAKYFNSSPTPARSTFQAGALPKNAK 180
           +G IL+A GADY  VVKTTIMLAD+ADF  VN+IYAKYF  +P+PARST+Q  ALP NAK
Sbjct: 121 MGEILKASGADYSSVVKTTIMLADLADFKTVNEIYAKYF-PAPSPARSTYQVAALPLNAK 180

Query: 181 IEIDAIAAI 186
           IEI+ IA +
Sbjct: 181 IEIECIATL 187

The following BLAST results are available for this feature:
BLAST of Lcy11g013710 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q94JQ41.8e-4050.79Reactive Intermediate Deaminase A, chloroplastic OS=Arabidopsis thaliana OX=3702... [more]
Q101212.4e-2951.88RutC family protein C23G10.2 OS=Caenorhabditis elegans OX=6239 GN=C23G10.2 PE=3 ... [more]
P527589.3e-2950.832-iminobutanoate/2-iminopropanoate deaminase OS=Homo sapiens OX=9606 GN=RIDA PE=... [more]
Q3T1142.7e-2850.002-iminobutanoate/2-iminopropanoate deaminase OS=Bos taurus OX=9913 GN=RIDA PE=2 ... [more]
P806016.0e-2850.002-iminobutanoate/2-iminopropanoate deaminase OS=Capra hircus OX=9925 GN=RIDA PE=... [more]
BLAST of Lcy11g013710 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JD579.8e-7477.302-iminobutanoate/2-iminopropanoate deaminase-like OS=Cucurbita maxima OX=3661 GN... [more]
A0A6J1F0U94.9e-7375.682-iminobutanoate/2-iminopropanoate deaminase-like OS=Cucurbita moschata OX=3662 ... [more]
A0A6J1EVW22.7e-7174.592-iminobutanoate/2-iminopropanoate deaminase-like OS=Cucurbita moschata OX=3662 ... [more]
A0RZC71.9e-6974.87Plastid-lipid associated protein OS=Cucumis sativus OX=3659 GN=CHRD PE=2 SV=1[more]
A0A5D3BWQ52.5e-6975.94Ribonuclease UK114-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
BLAST of Lcy11g013710 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023552960.11.6e-7376.762-iminobutanoate/2-iminopropanoate deaminase-like [Cucurbita pepo subsp. pepo][more]
XP_022985268.12.0e-7377.302-iminobutanoate/2-iminopropanoate deaminase-like [Cucurbita maxima][more]
XP_023553271.12.7e-7376.762-iminobutanoate/2-iminopropanoate deaminase-like [Cucurbita pepo subsp. pepo][more]
KAG6577420.11.0e-7275.68Reactive Intermediate Deaminase A, chloroplastic, partial [Cucurbita argyrosperm... [more]
XP_022932153.11.0e-7275.682-iminobutanoate/2-iminopropanoate deaminase-like [Cucurbita moschata][more]
BLAST of Lcy11g013710 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G20390.11.3e-4150.79endoribonuclease L-PSP family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035959RutC-like superfamilyGENE3D3.30.1330.40coord: 61..185
e-value: 1.2E-42
score: 147.0
IPR035959RutC-like superfamilySUPERFAMILY55298YjgF-likecoord: 61..185
IPR006056RidA familyTIGRFAMTIGR00004TIGR00004coord: 62..184
e-value: 1.2E-44
score: 149.5
IPR006175YjgF/YER057c/UK114 familyPFAMPF01042Ribonuc_L-PSPcoord: 67..184
e-value: 1.9E-37
score: 127.9
IPR006175YjgF/YER057c/UK114 familyPANTHERPTHR118032-IMINOBUTANOATE/2-IMINOPROPANOATE DEAMINASE RIDAcoord: 30..184
NoneNo IPR availablePANTHERPTHR11803:SF51BNAA05G36080D PROTEINcoord: 30..184
NoneNo IPR availableCDDcd00448YjgF_YER057c_UK114_familycoord: 76..183
e-value: 2.74172E-40
score: 130.371
IPR019897RidA, conserved sitePROSITEPS01094UPF0076coord: 161..179

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy11g013710.1Lcy11g013710.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:1901565 organonitrogen compound catabolic process
cellular_component GO:0005829 cytosol
cellular_component GO:0005739 mitochondrion
molecular_function GO:0019239 deaminase activity