Lcy11g013670 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g013670
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Translation factor SUI1
Location	Chr11: 21941580 .. 21944451 (+)
RNA-Seq Expression	Lcy11g013670
Synteny	Lcy11g013670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGTAAAGTAATTTTGGAAGTTTTTTTTTTTTCAAATGTTTGCTGGTTTTTTCATGTTACTCAGAACTTTGTGGGTGATTTTTTTTTTTTTTCTGTTAATAACTTTGTGAGATTTTTTTTTAATAAAGGGATAATAACAATGGGAAAAATCAGTATGGAGTGTTTGGTTTCTTCAAATAAAGAGTTTCTCCGACAAATTTCTTACCAGAAACAAACTCAAATGCAATGTGAGTTAAGAAAAAAAAATCAATCACACGCTTTAACAAACATTCAAATTGAAAGTTAATCGAAGGTCCACATTACAACACCTATATGCAAGTATGAGGTTAAAATTGATACAACCAGCTAAGTTTGAGATTCAATTTCATGAAATTAAAAATTCAAGGTTAAAATTGATATAACATGGTAAGTTTAGGGTCAAAAATGTTTTTTTTTTTTTTAATCTAAATCTTAACAATTTTTACATCATACAAATATTTTATCATCCATTTAATTGAATGCATATGAAAATATTATTTTTAACGATGTTTCAAACAAAAATTTATTAGAAGATTAAAATTTTAAAAAATAAATTTAATTTAAAATTAAGATTATAAAATTTATTTAAGTTTGAAGTAGAATGGGATGAAATTGAAAGATTAAAATAAAAATCAATACAACTAAATGATTTTTTATTTTCATTTTTTTAGAAAAATCCATCAGTGTCGTGTGTGGATTCGAGTGTTGCGTGCGTTCATTGTACGCGTCCCCTCGCACTAGGAATCCCTTTTTCCACATCGAGAATATATTATCCAGATAGCCATACAACTCAAATTCATCGTGGCCGTTCATATTCTCAACAACACTCCATCCCCACCGTCCATTCTCTCCACCGTTCGCACCAAACACCACTCTATATATACTGCACTGAGCCACTCCGTTCTCTTCACGCTTTCTATTCGCATTCTGGTTCGTCTTCGCCTTCGCCTTCAGGTAAATTTCCTCTCTTCTTCTTGCTTTTCAATTTCACAGTTGCTTCTTCGTAATCTTTCTTGGCTTTGAAATCGATCTTGATCTTGCTTTCTTTCTTGCTTTCTGTTTTTGTATGATTTTTCGGTTTTTTCAATGTGTTTTGAGTTCTTGTTGGGATAGAAGAAGTGTGTGATCGAAAAGGTTTCTTTCTTCTTTTCGACCTTTTGAACTTGACTGTGTTGAGTTTTGATCGTCGCAGTTCCTAACTGTTCGTTGGTCGAGGATTTTACTTGCTGTTTTCTCGGTGTTTGTTTGTTGAGTTGCTTTCTATCACTCTTTACCCGGTTTTGTTGGGAGTGATTGATGTGATTCCAATTTTCTTTGACTATTAATGCCACTGTGTTGTTTGATGTTGTTAGAATTAATCGTTTACTATATCATGTCTCTCTGTTTAATTTTATACACCTCTGTCTGTGATGCTTTCGAGTGTGAGAATTCATCTCAGTCACAAATTTAACTGCTGTATAAGTATTGTGATCTAATAAGAAACATCCATGGGTTTAAATCTTCTTTTTGGTGTTTAGTTCGTAAACTTTCAACTTTTCTGTTCTTTCCGGTATACTATTTAATCACTCGATTTTGCATAGAAAACTATTTTGCTCCTTATGTTTAATCTTTCGTTCATCATTTAACAAGAATCTAAATCTGTTTGGAAATTTGATAGCTAACTGACTACACAATTGGTCTCAAATATTTATCTACTTGGACATTTAATGATCAATCAGGTGAATAAGAACTTACTGAAAAATTAATGGTAAGGAGTAAAATGGTTTTGTTTGTAAAATTCATGAATCAAATTAGAGTTAGCATGAAATTTTGGGATTAGAATAGAAACCACTATTTTATCTTGAATACAGCTCACTGGTTCACCAGTTTCCACCAAAAAAATATATTGGCCATGGTTTCCTTTAAAAGCTATCTTTCCTGGTTAGTTGGTTAGTCAATTTCAACCAAATAAAGTATCTTCTGATAAACCAATCTTGCTGGTTAAATCTTCAAGGGTGAATGTTAAACAGCTTTTTGAGTAGTTTTTATTTTTGTGGGTCTTGGAAACAGCTTTTGGGTGCCTTCAGTTACCACCAAGCAAATTACATGGTTGATCTAGACGTCCAGATTCCAACTGCTTTTGATCCCTTTGCCGACGCCAAGGACTCGGATGCCCCAGGAAGCAAAGAGTACGTCCATATAAGGGTCCAACAGAGGAATGGGAAGAAGTGTCTGACAACAGTTCAAGGGCTTAAGAAGGAGTTCAGCTATGATAAGATCCTCAAGGACCTGAAGAAGGACTTCTGTTGCAATGGGAATGTTGTTCAGGACAAAGAGCTGGGGAAGATAATCCAACTCCAAGGCGATCAGCGCAAGAACGTTTCTCATTTCCTCGTTCAGGCCGGCCTCGTTAAGAAGGATCAAATCAAGATACATGGTTTTTGATCAGGATCCTTCAATTCTTTGTTGTTTATGTTTGTGTGAAAGTTTGAAACTGAAGGAGGTGATGCGTGGAGAAGGGGAGATTCTGTGTTGTTGAATGGTGTTTAATGCAGCAAAGTCTTGTCTGTTTGTGTTATGGTTTGTTTTTACAGCGTACTGACAAAGGGGATTGCCATGGAATGTGATGGCTTCCTTTTATTAATTAGAAAAAAGGATGTTTTGAGTCTACATGGATTAATGTGATGGTTTGTTTGATTTTTACTTCTTTTTTTTTTTTTTTGGGTTAGTGAGATTCTCTATGTTCTCATCTCCTTAACCACTTCTATAACTTTCTACTAGTTTGCTTTCTTGTGACTGAAAGGATATTTTCAGGCATTGATGTTATTAAATCTGATGTATGGAGAGAACCTTGTGCAATTATATAATTAG

mRNA sequence

ATGAAAGAATCCCTTTTTCCACATCGAGAATATATTATCCAGATAGCCATACAACTCAAATTCATCGTGGCCGTTCATATTCTCAACAACACTCCATCCCCACCGTCCATTCTCTCCACCGTTCGCACCAAACACCACTCTATATATACTGCACTGAGCCACTCCGTTCTCTTCACGCTTTCTATTCGCATTCTGGTTCGTCTTCGCCTTCGCCTTCAGCTTTTGGGTGCCTTCAGTTACCACCAAGCAAATTACATGGTTGATCTAGACGTCCAGATTCCAACTGCTTTTGATCCCTTTGCCGACGCCAAGGACTCGGATGCCCCAGGAAGCAAAGAGTACGTCCATATAAGGGTCCAACAGAGGAATGGGAAGAAGTGTCTGACAACAGTTCAAGGGCTTAAGAAGGAGTTCAGCTATGATAAGATCCTCAAGGACCTGAAGAAGGACTTCTGTTGCAATGGGAATGTTGTTCAGGACAAAGAGCTGGGGAAGATAATCCAACTCCAAGGCGATCAGCGCAAGAACGTTTCTCATTTCCTCGTTCAGGCCGGCCTCGTTAAGAAGGATCAAATCAAGATACATGGTTTTTGATCAGGATCCTTCAATTCTTTGTTGTTTATGTTTGTGTGAAAGTTTGAAACTGAAGGAGGTGATGCGTGGAGAAGGGGAGATTCTGTGTTGTTGAATGGTGTTTAATGCAGCAAAGTCTTGTCTGTTTGTGTTATGGTTTGTTTTTACAGCGTACTGACAAAGGGGATTGCCATGGAATGTGATGGCTTCCTTTTATTAATTAGAAAAAAGGATGTTTTGAGTCTACATGGATTAATGTGATGGTTTGTTTGATTTTTACTTCTTTTTTTTTTTTTTTGGGTTAGTGAGATTCTCTATGTTCTCATCTCCTTAACCACTTCTATAACTTTCTACTAGTTTGCTTTCTTGTGACTGAAAGGATATTTTCAGGCATTGATGTTATTAAATCTGATGTATGGAGAGAACCTTGTGCAATTATATAATTAG

Coding sequence (CDS)

ATGAAAGAATCCCTTTTTCCACATCGAGAATATATTATCCAGATAGCCATACAACTCAAATTCATCGTGGCCGTTCATATTCTCAACAACACTCCATCCCCACCGTCCATTCTCTCCACCGTTCGCACCAAACACCACTCTATATATACTGCACTGAGCCACTCCGTTCTCTTCACGCTTTCTATTCGCATTCTGGTTCGTCTTCGCCTTCGCCTTCAGCTTTTGGGTGCCTTCAGTTACCACCAAGCAAATTACATGGTTGATCTAGACGTCCAGATTCCAACTGCTTTTGATCCCTTTGCCGACGCCAAGGACTCGGATGCCCCAGGAAGCAAAGAGTACGTCCATATAAGGGTCCAACAGAGGAATGGGAAGAAGTGTCTGACAACAGTTCAAGGGCTTAAGAAGGAGTTCAGCTATGATAAGATCCTCAAGGACCTGAAGAAGGACTTCTGTTGCAATGGGAATGTTGTTCAGGACAAAGAGCTGGGGAAGATAATCCAACTCCAAGGCGATCAGCGCAAGAACGTTTCTCATTTCCTCGTTCAGGCCGGCCTCGTTAAGAAGGATCAAATCAAGATACATGGTTTTTGA

Protein sequence

MKESLFPHREYIIQIAIQLKFIVAVHILNNTPSPPSILSTVRTKHHSIYTALSHSVLFTLSIRILVRLRLRLQLLGAFSYHQANYMVDLDVQIPTAFDPFADAKDSDAPGSKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSHFLVQAGLVKKDQIKIHGF

Homology

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BLAST of Lcy11g013670 vs. ExPASy Swiss-Prot
Match: Q94JV4 (Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g54290 PE=3 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.4e-46
Identity = 92/113 (81.42%), Postives = 101/113 (89.38%), Query Frame = 0


Query: 86  MVDLDVQIPTAFDPFADAKDSDA-PGSKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKIL 145
           M DL+VQ+PTAFDPFADA   D+  G+KEYVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSDLEVQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSKIL 60

Query: 146 KDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSHFLVQAGLVKKDQIKIHGF 198
           KDLKK+FCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

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BLAST of Lcy11g013670 vs. ExPASy Swiss-Prot
Match: A6MZM2 (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. indica OX=39946 GN=GOS2 PE=2 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.8e-46
Identity = 90/115 (78.26%), Postives = 103/115 (89.57%), Query Frame = 0


Query: 86  MVDLDVQIPTAFDPFADAKDSD---APGSKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDK 145
           M DLD+QIPTAFDPFA+A   D   A GSK+YVH+R+QQRNG+K LTTVQGLKKEFSY+K
Sbjct: 1   MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNK 60

Query: 146 ILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSHFLVQAGLVKKDQIKIHGF 198
           ILKDLKK+FCCNG VVQD ELG++IQLQGDQRKNVS+FLVQAG+VKK+ IKIHGF
Sbjct: 61  ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115

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BLAST of Lcy11g013670 vs. ExPASy Swiss-Prot
Match: Q0D5W6 (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=GOS2 PE=3 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.8e-46
Identity = 90/115 (78.26%), Postives = 103/115 (89.57%), Query Frame = 0


Query: 86  MVDLDVQIPTAFDPFADAKDSD---APGSKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDK 145
           M DLD+QIPTAFDPFA+A   D   A GSK+YVH+R+QQRNG+K LTTVQGLKKEFSY+K
Sbjct: 1   MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNK 60

Query: 146 ILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSHFLVQAGLVKKDQIKIHGF 198
           ILKDLKK+FCCNG VVQD ELG++IQLQGDQRKNVS+FLVQAG+VKK+ IKIHGF
Sbjct: 61  ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115

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BLAST of Lcy11g013670 vs. ExPASy Swiss-Prot
Match: P56330 (Protein translation factor SUI1 homolog OS=Zea mays OX=4577 GN=TIF PE=3 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 2.3e-46
Identity = 90/115 (78.26%), Postives = 102/115 (88.70%), Query Frame = 0


Query: 86  MVDLDVQIPTAFDPFADAKDSD---APGSKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDK 145
           M DLD+QIPTAFDPFA+A   D   A GSK+YVH+R+QQRNG+K LTTVQGLKKEFSY K
Sbjct: 1   MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSK 60

Query: 146 ILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSHFLVQAGLVKKDQIKIHGF 198
           ILKDLKK+FCCNG VVQD ELG++IQLQGDQRKNVS+FLVQAG+VKK+ IKIHGF
Sbjct: 61  ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115

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BLAST of Lcy11g013670 vs. ExPASy Swiss-Prot
Match: Q9SM41 (Protein translation factor SUI1 homolog OS=Sporobolus stapfianus OX=56623 PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 4.0e-46
Identity = 89/115 (77.39%), Postives = 103/115 (89.57%), Query Frame = 0


Query: 86  MVDLDVQIPTAFDPFADAKDSD---APGSKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDK 145
           M DLD+QIPTAFDPF++A   D   A GSK+YVH+R+QQRNG+K LTTVQGLKKEFSY+K
Sbjct: 1   MSDLDIQIPTAFDPFSEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNK 60

Query: 146 ILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSHFLVQAGLVKKDQIKIHGF 198
           ILKDLKK+FCCNG VVQD ELG++IQLQGDQRKNVS+FLVQAG+VKK+ IKIHGF
Sbjct: 61  ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115

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BLAST of Lcy11g013670 vs. ExPASy TrEMBL
Match: A0A5D3BUS5 (SUI1 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold925G00240 PE=3 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 3.7e-55
Identity = 109/112 (97.32%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 86  MVDLDVQIPTAFDPFADAKDSDAPGSKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 145
           MVDLDVQIP+AFDPFADAKDSDAPG+KEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK
Sbjct: 1   MVDLDVQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 60

Query: 146 DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSHFLVQAGLVKKDQIKIHGF 198
           DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVS FLVQAGLVKKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

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BLAST of Lcy11g013670 vs. ExPASy TrEMBL
Match: A0A0A0L7M8 (SUI1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G077610 PE=3 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 3.7e-55
Identity = 109/112 (97.32%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 86  MVDLDVQIPTAFDPFADAKDSDAPGSKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 145
           MVDLDVQIP+AFDPFADAKDSDAPG+KEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK
Sbjct: 1   MVDLDVQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 60

Query: 146 DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSHFLVQAGLVKKDQIKIHGF 198
           DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVS FLVQAGLVKKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

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BLAST of Lcy11g013670 vs. ExPASy TrEMBL
Match: A0A1S4E468 (protein translation factor SUI1 homolog 2 OS=Cucumis melo OX=3656 GN=LOC103501585 PE=3 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 3.7e-55
Identity = 109/112 (97.32%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 86  MVDLDVQIPTAFDPFADAKDSDAPGSKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 145
           MVDLDVQIP+AFDPFADAKDSDAPG+KEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK
Sbjct: 1   MVDLDVQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 60

Query: 146 DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSHFLVQAGLVKKDQIKIHGF 198
           DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVS FLVQAGLVKKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

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BLAST of Lcy11g013670 vs. ExPASy TrEMBL
Match: A0A6J1DC94 (protein translation factor SUI1 homolog 2-like OS=Momordica charantia OX=3673 GN=LOC111019008 PE=3 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 3.2e-54
Identity = 106/112 (94.64%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 86  MVDLDVQIPTAFDPFADAKDSDAPGSKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 145
           MVDLDV+IPTAF+PFADAKDSDAPG+KEYVH+RVQQRNGKKCLTTVQGLKK+FSYDKILK
Sbjct: 1   MVDLDVEIPTAFNPFADAKDSDAPGNKEYVHVRVQQRNGKKCLTTVQGLKKDFSYDKILK 60

Query: 146 DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSHFLVQAGLVKKDQIKIHGF 198
           DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVS FLVQAGLVKKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of Lcy11g013670 vs. ExPASy TrEMBL
Match: A0A5D3DHR8 (SUI1 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G001030 PE=3 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 5.4e-54
Identity = 105/116 (90.52%), Postives = 113/116 (97.41%), Query Frame = 0


Query: 82  QANYMVDLDVQIPTAFDPFADAKDSDAPGSKEYVHIRVQQRNGKKCLTTVQGLKKEFSYD 141
           Q+ +MV+LD QIP+AFDPFADAKDSDAPG+KEYVHIRVQQRNGKKCLTTVQGLKKEFSY+
Sbjct: 35  QSRFMVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYE 94

Query: 142 KILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSHFLVQAGLVKKDQIKIHGF 198
           KILKD+KK+FCCNGNVVQDKELGKIIQLQGDQRKNVS FLVQAGLVKKDQIKIHGF
Sbjct: 95  KILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 150

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BLAST of Lcy11g013670 vs. NCBI nr
Match: XP_038903171.1 (protein translation factor SUI1 homolog 2-like [Benincasa hispida])

HSP 1 Score: 226.1 bits (575), Expect = 2.7e-55
Identity = 110/112 (98.21%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 86  MVDLDVQIPTAFDPFADAKDSDAPGSKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 145
           MVDLDVQIPTAFDPFADAKDSDAPG+KEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK
Sbjct: 1   MVDLDVQIPTAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 60

Query: 146 DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSHFLVQAGLVKKDQIKIHGF 198
           DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVS FLVQAGLVKKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

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BLAST of Lcy11g013670 vs. NCBI nr
Match: XP_016903023.1 (PREDICTED: protein translation factor SUI1 homolog 2 [Cucumis melo] >XP_031739416.1 protein translation factor SUI1 homolog 2 [Cucumis sativus] >KAA0033974.1 SUI1 domain-containing protein [Cucumis melo var. makuwa] >KGN56126.1 hypothetical protein Csa_011317 [Cucumis sativus] >TYK02572.1 SUI1 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 224.6 bits (571), Expect = 7.7e-55
Identity = 109/112 (97.32%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 86  MVDLDVQIPTAFDPFADAKDSDAPGSKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 145
           MVDLDVQIP+AFDPFADAKDSDAPG+KEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK
Sbjct: 1   MVDLDVQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 60

Query: 146 DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSHFLVQAGLVKKDQIKIHGF 198
           DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVS FLVQAGLVKKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of Lcy11g013670 vs. NCBI nr
Match: XP_022150982.1 (protein translation factor SUI1 homolog 2-like [Momordica charantia])

HSP 1 Score: 221.5 bits (563), Expect = 6.5e-54
Identity = 106/112 (94.64%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 86  MVDLDVQIPTAFDPFADAKDSDAPGSKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 145
           MVDLDV+IPTAF+PFADAKDSDAPG+KEYVH+RVQQRNGKKCLTTVQGLKK+FSYDKILK
Sbjct: 1   MVDLDVEIPTAFNPFADAKDSDAPGNKEYVHVRVQQRNGKKCLTTVQGLKKDFSYDKILK 60

Query: 146 DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSHFLVQAGLVKKDQIKIHGF 198
           DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVS FLVQAGLVKKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of Lcy11g013670 vs. NCBI nr
Match: KAA0025154.1 (SUI1 domain-containing protein [Cucumis melo var. makuwa] >TYK23112.1 SUI1 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 220.7 bits (561), Expect = 1.1e-53
Identity = 105/116 (90.52%), Postives = 113/116 (97.41%), Query Frame = 0


Query: 82  QANYMVDLDVQIPTAFDPFADAKDSDAPGSKEYVHIRVQQRNGKKCLTTVQGLKKEFSYD 141
           Q+ +MV+LD QIP+AFDPFADAKDSDAPG+KEYVHIRVQQRNGKKCLTTVQGLKKEFSY+
Sbjct: 35  QSRFMVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYE 94

Query: 142 KILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSHFLVQAGLVKKDQIKIHGF 198
           KILKD+KK+FCCNGNVVQDKELGKIIQLQGDQRKNVS FLVQAGLVKKDQIKIHGF
Sbjct: 95  KILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 150

[Close]

BLAST of Lcy11g013670 vs. NCBI nr
Match: XP_006586085.1 (protein translation factor SUI1 homolog 2 [Glycine max] >XP_028245971.1 protein translation factor SUI1 homolog 2-like [Glycine soja] >KHM99561.1 Protein translation factor SUI1 like 2 [Glycine soja] >KRH46184.1 hypothetical protein GLYMA_08G316700v4 [Glycine max] >RZB99784.1 Protein translation factor SUI1-like 2 [Glycine soja])

HSP 1 Score: 219.5 bits (558), Expect = 2.5e-53
Identity = 102/119 (85.71%), Postives = 114/119 (95.80%), Query Frame = 0


Query: 79  SYHQANYMVDLDVQIPTAFDPFADAKDSDAPGSKEYVHIRVQQRNGKKCLTTVQGLKKEF 138
           S  QA YMVDL++Q+P+AFDPFA+A++SDAPG+KEYVHIR+QQRNGKK LTTVQGLKKEF
Sbjct: 39  SLQQAKYMVDLEIQVPSAFDPFAEARESDAPGAKEYVHIRIQQRNGKKSLTTVQGLKKEF 98

Query: 139 SYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSHFLVQAGLVKKDQIKIHGF 198
           SY+KILKDLKKDFCCNG VVQDKELGKIIQLQGDQRKNVSHFLVQAGLV+KDQ+KIHGF
Sbjct: 99  SYEKILKDLKKDFCCNGTVVQDKELGKIIQLQGDQRKNVSHFLVQAGLVRKDQVKIHGF 157

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BLAST of Lcy11g013670 vs. TAIR 10
Match: AT5G54940.1 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 201.8 bits (512), Expect = 5.0e-52
Identity = 94/112 (83.93%), Postives = 106/112 (94.64%), Query Frame = 0


Query: 86  MVDLDVQIPTAFDPFADAKDSDAPGSKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 145
           MV+LD+QIP+A+DPFA+AKDSDAPG+KE +HIR+QQRNGKK LTTVQGLKKE+SY++ILK
Sbjct: 1   MVELDIQIPSAYDPFAEAKDSDAPGAKENIHIRIQQRNGKKSLTTVQGLKKEYSYERILK 60

Query: 146 DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSHFLVQAGLVKKDQIKIHGF 198
           DLKKDFCCNGNVVQDKELGKIIQLQGDQRK VS FLVQ G+ KKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKKVSQFLVQTGIAKKDQIKIHGF 112

[Close]

BLAST of Lcy11g013670 vs. TAIR 10
Match: AT5G54940.2 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 201.8 bits (512), Expect = 5.0e-52
Identity = 94/112 (83.93%), Postives = 106/112 (94.64%), Query Frame = 0


Query: 86  MVDLDVQIPTAFDPFADAKDSDAPGSKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 145
           MV+LD+QIP+A+DPFA+AKDSDAPG+KE +HIR+QQRNGKK LTTVQGLKKE+SY++ILK
Sbjct: 1   MVELDIQIPSAYDPFAEAKDSDAPGAKENIHIRIQQRNGKKSLTTVQGLKKEYSYERILK 60

Query: 146 DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSHFLVQAGLVKKDQIKIHGF 198
           DLKKDFCCNGNVVQDKELGKIIQLQGDQRK VS FLVQ G+ KKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKKVSQFLVQTGIAKKDQIKIHGF 112

[Close]

BLAST of Lcy11g013670 vs. TAIR 10
Match: AT1G54290.1 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 187.6 bits (475), Expect = 9.7e-48
Identity = 92/113 (81.42%), Postives = 101/113 (89.38%), Query Frame = 0


Query: 86  MVDLDVQIPTAFDPFADAKDSDA-PGSKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKIL 145
           M DL+VQ+PTAFDPFADA   D+  G+KEYVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSDLEVQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSKIL 60

Query: 146 KDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSHFLVQAGLVKKDQIKIHGF 198
           KDLKK+FCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

[Close]

BLAST of Lcy11g013670 vs. TAIR 10
Match: AT4G27130.1 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 184.9 bits (468), Expect = 6.3e-47
Identity = 91/113 (80.53%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 86  MVDLDVQIPTAFDPFADAKDSDA-PGSKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKIL 145
           M +LD Q+PTAFDPFADA   D+  G+KEYVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 146 KDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSHFLVQAGLVKKDQIKIHGF 198
           KDLKK+FCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

[Close]

BLAST of Lcy11g013670 vs. TAIR 10
Match: AT5G54760.1 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 184.5 bits (467), Expect = 8.2e-47
Identity = 91/113 (80.53%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 86  MVDLDVQIPTAFDPFADAKDSDA-PGSKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKIL 145
           M +LD Q+PTAFDPFADA   D+  G+KEYVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANVEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 146 KDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSHFLVQAGLVKKDQIKIHGF 198
           KDLKK+FCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

The following BLAST results are available for this feature:

BLAST of Lcy11g013670 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94JV4	1.4e-46	81.42	Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]
A6MZM2	1.8e-46	78.26	Protein translation factor SUI1 homolog OS=Oryza sativa subsp. indica OX=39946 G...	[more]
Q0D5W6	1.8e-46	78.26	Protein translation factor SUI1 homolog OS=Oryza sativa subsp. japonica OX=39947...	[more]
P56330	2.3e-46	78.26	Protein translation factor SUI1 homolog OS=Zea mays OX=4577 GN=TIF PE=3 SV=1	[more]
Q9SM41	4.0e-46	77.39	Protein translation factor SUI1 homolog OS=Sporobolus stapfianus OX=56623 PE=3 S...	[more]

BLAST of Lcy11g013670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BUS5	3.7e-55	97.32	SUI1 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A0A0L7M8	3.7e-55	97.32	SUI1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G077610 PE=3 S...	[more]
A0A1S4E468	3.7e-55	97.32	protein translation factor SUI1 homolog 2 OS=Cucumis melo OX=3656 GN=LOC10350158...	[more]
A0A6J1DC94	3.2e-54	94.64	protein translation factor SUI1 homolog 2-like OS=Momordica charantia OX=3673 GN...	[more]
A0A5D3DHR8	5.4e-54	90.52	SUI1 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]

BLAST of Lcy11g013670 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903171.1	2.7e-55	98.21	protein translation factor SUI1 homolog 2-like [Benincasa hispida]	[more]
XP_016903023.1	7.7e-55	97.32	PREDICTED: protein translation factor SUI1 homolog 2 [Cucumis melo] >XP_03173941...	[more]
XP_022150982.1	6.5e-54	94.64	protein translation factor SUI1 homolog 2-like [Momordica charantia]	[more]
KAA0025154.1	1.1e-53	90.52	SUI1 domain-containing protein [Cucumis melo var. makuwa] >TYK23112.1 SUI1 domai...	[more]
XP_006586085.1	2.5e-53	85.71	protein translation factor SUI1 homolog 2 [Glycine max] >XP_028245971.1 protein ...	[more]

BLAST of Lcy11g013670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G54940.1	5.0e-52	83.93	Translation initiation factor SUI1 family protein	[more]
AT5G54940.2	5.0e-52	83.93	Translation initiation factor SUI1 family protein	[more]
AT1G54290.1	9.7e-48	81.42	Translation initiation factor SUI1 family protein	[more]
AT4G27130.1	6.3e-47	80.53	Translation initiation factor SUI1 family protein	[more]
AT5G54760.1	8.2e-47	80.53	Translation initiation factor SUI1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.780.10		coord: 76..197 e-value: 2.6E-45 score: 155.7
None	No IPR available	PANTHER	PTHR10388:SF56	BNAA10G09260D PROTEIN	coord: 86..197
None	No IPR available	PANTHER	PTHR10388	EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1	coord: 86..197
IPR001950	SUI1 domain	PFAM	PF01253	SUI1	coord: 112..186 e-value: 9.0E-24 score: 83.8
IPR001950	SUI1 domain	PROSITE	PS50296	SUI1	coord: 115..185 score: 22.785538
IPR005874	Eukaryotic translation initiation factor SUI1	TIGRFAM	TIGR01160	TIGR01160	coord: 90..197 e-value: 1.5E-51 score: 171.5
IPR005874	Eukaryotic translation initiation factor SUI1	CDD	cd11566	eIF1_SUI1	coord: 113..196 e-value: 6.10921E-49 score: 152.304
IPR036877	SUI1 domain superfamily	SUPERFAMILY	55159	eIF1-like	coord: 84..197

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g013670.1	Lcy11g013670.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006413	translational initiation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003743	translation initiation factor activity