Lcy11g013460 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g013460
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Protein of unknown function (DUF3511)
Location	Chr11: 21158228 .. 21158865 (+)
RNA-Seq Expression	Lcy11g013460
Synteny	Lcy11g013460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTCCCTCCCCTTCTATAAACCTTGAAAACGAAACCAAAATCCAAAAAGCCTTTATTCTCTCTCTCGATCTCATCGTTAATTATAAGAGAGAAACATACAAAAGGAAGAAGGTGACGACGATGGAAGGGATCCATCGCCGTCCAAACAAGGGTGGTCAGAGCCTGGAAGTCATAGACGTGAGAAACCTTTGTGAAAACAAGAAGTACTTGAATCAGTCACAAAAGCGAACTATAGTCGACCCAACGTTTGTGAAACGACATGTGAACAAGACACAGGAATCGTCGAAAAGCTCGACGAAGTCATGGTGGAAGGCCCCGGAAATGAAGAGACGACGACGTGTTGCGAAGTACAAATTGTATGCAGTTGAAGGGAAGGTAAAGAATTCCATAAAGAAAGGGATCAAGTGGTTCAAAACCAAGTGTCGCAGAATCATATCTGGGTTTTGAAAATTTTTACACTTATATAACAAAAATGGGCTTCAACTTTCATGGCTGATTTTCTTGTTCTTTGTATGGACATGTTTTAAAACGTGGGATGGTTGATTATGAAGATCAATATGCTTTGTCTTACGTTGTTAAGATGCATGGTTGTTTGTTTGGTTTGTTATTCTCTGTTTGGATATTGAAAATTAAATGA

mRNA sequence

ATTTCCCTCCCCTTCTATAAACCTTGAAAACGAAACCAAAATCCAAAAAGCCTTTATTCTCTCTCTCGATCTCATCGTTAATTATAAGAGAGAAACATACAAAAGGAAGAAGGTGACGACGATGGAAGGGATCCATCGCCGTCCAAACAAGGGTGGTCAGAGCCTGGAAGTCATAGACGTGAGAAACCTTTGTGAAAACAAGAAGTACTTGAATCAGTCACAAAAGCGAACTATAGTCGACCCAACGTTTGTGAAACGACATGTGAACAAGACACAGGAATCGTCGAAAAGCTCGACGAAGTCATGGTGGAAGGCCCCGGAAATGAAGAGACGACGACGTGTTGCGAAGTACAAATTGTATGCAGTTGAAGGGAAGGTAAAGAATTCCATAAAGAAAGGGATCAAGTGGTTCAAAACCAAGTGTCGCAGAATCATATCTGGGTTTTGAAAATTTTTACACTTATATAACAAAAATGGGCTTCAACTTTCATGGCTGATTTTCTTGTTCTTTGTATGGACATGTTTTAAAACGTGGGATGGTTGATTATGAAGATCAATATGCTTTGTCTTACGTTGTTAAGATGCATGGTTGTTTGTTTGGTTTGTTATTCTCTGTTTGGATATTGAAAATTAAATGA

Coding sequence (CDS)

ATGGAAGGGATCCATCGCCGTCCAAACAAGGGTGGTCAGAGCCTGGAAGTCATAGACGTGAGAAACCTTTGTGAAAACAAGAAGTACTTGAATCAGTCACAAAAGCGAACTATAGTCGACCCAACGTTTGTGAAACGACATGTGAACAAGACACAGGAATCGTCGAAAAGCTCGACGAAGTCATGGTGGAAGGCCCCGGAAATGAAGAGACGACGACGTGTTGCGAAGTACAAATTGTATGCAGTTGAAGGGAAGGTAAAGAATTCCATAAAGAAAGGGATCAAGTGGTTCAAAACCAAGTGTCGCAGAATCATATCTGGGTTTTGA

Protein sequence

MEGIHRRPNKGGQSLEVIDVRNLCENKKYLNQSQKRTIVDPTFVKRHVNKTQESSKSSTKSWWKAPEMKRRRRVAKYKLYAVEGKVKNSIKKGIKWFKTKCRRIISGF

Homology

[Close]

BLAST of Lcy11g013460 vs. ExPASy TrEMBL
Match: A0A5D3BTT8 (DUF3511 domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold925G00370 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 2.5e-37
Identity = 82/108 (75.93%), Postives = 92/108 (85.19%), Query Frame = 0


Query: 1   MEGIHRRPNKGGQSLEVIDVRNLCENKKYLNQSQKRTIVDPTFVKRHVNKTQESSKSSTK 60
           MEG+H   NKGG+SLEV+DVR L ENK YLNQSQ+RT+VDP+FVKR+V KT E SK   K
Sbjct: 1   MEGLHHHQNKGGRSLEVMDVRKLSENKMYLNQSQRRTVVDPSFVKRYVTKTWEPSKMK-K 60

Query: 61  SWWKAPEMKRRRRVAKYKLYAVEGKVKNSIKKGIKWFKTKCRRIISGF 109
           SWWK PEMKRR+RVAKYKLYAVEGKVK+SIKKG +W KTKC RIISGF
Sbjct: 61  SWWKKPEMKRRQRVAKYKLYAVEGKVKSSIKKGFRWIKTKCSRIISGF 107

[Close]

BLAST of Lcy11g013460 vs. ExPASy TrEMBL
Match: A0A0A0L7N5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G077700 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 7.3e-37
Identity = 81/109 (74.31%), Postives = 91/109 (83.49%), Query Frame = 0


Query: 1   MEGIHRRPNKGGQSLEVIDVRNLCENKKYLNQSQKRTIVDPTFVKRHVNKTQESSKSSTK 60
           MEG+H  PNKGG+SLEVIDVR L  NK YLNQSQ+RT+VDP+FVK++V KT E SKS  K
Sbjct: 1   MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKTSEPSKSCMK 60

Query: 61  S-WWKAPEMKRRRRVAKYKLYAVEGKVKNSIKKGIKWFKTKCRRIISGF 109
             WWK PEM+RR+RVAKYKLY VEGKVK SIKKGI+W KTKC RIISGF
Sbjct: 61  KPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISGF 109

[Close]

BLAST of Lcy11g013460 vs. ExPASy TrEMBL
Match: A0A6J1DCB3 (uncharacterized protein LOC111019023 OS=Momordica charantia OX=3673 GN=LOC111019023 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.1e-35
Identity = 81/110 (73.64%), Postives = 91/110 (82.73%), Query Frame = 0


Query: 1   MEGIHRRPNKGGQSLEVIDVRNLCENKKYLNQSQKRTIVD--PTFVKRHVNKTQESSKSS 60
           MEGIHRRP KGG+SLE+IDVRNL ENK  L+QS+ R  VD  P+  ++ + K  ESSKSS
Sbjct: 1   MEGIHRRPKKGGRSLEIIDVRNLSENKLSLSQSRSRAAVDPSPSTKRQAIKKPSESSKSS 60

Query: 61  TKSWWKAPEMKRRRRVAKYKLYAVEGKVKNSIKKGIKWFKTKCRRIISGF 109
            KSWWK PEMKRRRRVAKYKLY VEGKVKNSIKKGIKWFKT+C RI+SGF
Sbjct: 61  VKSWWKNPEMKRRRRVAKYKLYTVEGKVKNSIKKGIKWFKTRCSRIMSGF 110

[Close]

BLAST of Lcy11g013460 vs. ExPASy TrEMBL
Match: A0A5D3BBI7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1159G00320 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 5.1e-30
Identity = 71/110 (64.55%), Postives = 88/110 (80.00%), Query Frame = 0


Query: 1   MEGIHRRPNKGGQSLEVIDVRNLCENKKYLNQSQKRTIVDPTFVK-RHVNKTQESSKSST 60
           ME +HRRPNKG ++L++IDVR L ENK +LNQS++ + +DP+ +K R +  T ESSK+ST
Sbjct: 3   MERVHRRPNKGDRNLKIIDVRKLSENKMHLNQSRRHSTIDPSSMKPRAIKTTSESSKAST 62

Query: 61  -KSWWKAPEMKRRRRVAKYKLYAVEGKVKNSIKKGIKWFKTKCRRIISGF 109
            K WWK  EMKRRRRVAKYKLY VEG+VK SI+KGI WFK +C RIISGF
Sbjct: 63  VKLWWKNSEMKRRRRVAKYKLYTVEGRVKESIRKGINWFKCRCTRIISGF 112

[Close]

BLAST of Lcy11g013460 vs. ExPASy TrEMBL
Match: A0A0A0LL30 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G123580 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 4.5e-26
Identity = 69/110 (62.73%), Postives = 86/110 (78.18%), Query Frame = 0


Query: 1   MEGIHRRPNKGGQSLEVIDVRNLCENKKYLNQSQKRTIVDPTFVK-RHVNKTQESSKSS- 60
           MEG+HRRPNKG ++L +IDVR L ENK +LNQS +++ ++P+ VK R +    ESSK+S 
Sbjct: 39  MEGVHRRPNKGDRNLRIIDVRKLSENKIHLNQSGRQSTMNPSSVKPRGMKTASESSKTSG 98

Query: 61  TKSWWKAPEMKRRRRVAKYKLYAVEGKVKNSIKKGIKWFKTKCRRIISGF 109
            KSW K  E+KRRRRVAKYKLY VEGKVK+SI+KGI WFK K  RI+SGF
Sbjct: 99  GKSWGKKLEVKRRRRVAKYKLYTVEGKVKDSIRKGINWFKCKYTRIMSGF 148

[Close]

BLAST of Lcy11g013460 vs. NCBI nr
Match: KAA0033960.1 (DUF3511 domain protein [Cucumis melo var. makuwa] >TYK02584.1 DUF3511 domain protein [Cucumis melo var. makuwa])

HSP 1 Score: 164.5 bits (415), Expect = 5.2e-37
Identity = 82/108 (75.93%), Postives = 92/108 (85.19%), Query Frame = 0


Query: 1   MEGIHRRPNKGGQSLEVIDVRNLCENKKYLNQSQKRTIVDPTFVKRHVNKTQESSKSSTK 60
           MEG+H   NKGG+SLEV+DVR L ENK YLNQSQ+RT+VDP+FVKR+V KT E SK   K
Sbjct: 1   MEGLHHHQNKGGRSLEVMDVRKLSENKMYLNQSQRRTVVDPSFVKRYVTKTWEPSKMK-K 60

Query: 61  SWWKAPEMKRRRRVAKYKLYAVEGKVKNSIKKGIKWFKTKCRRIISGF 109
           SWWK PEMKRR+RVAKYKLYAVEGKVK+SIKKG +W KTKC RIISGF
Sbjct: 61  SWWKKPEMKRRQRVAKYKLYAVEGKVKSSIKKGFRWIKTKCSRIISGF 107

[Close]

BLAST of Lcy11g013460 vs. NCBI nr
Match: KGN56136.1 (hypothetical protein Csa_009524 [Cucumis sativus])

HSP 1 Score: 162.9 bits (411), Expect = 1.5e-36
Identity = 81/109 (74.31%), Postives = 91/109 (83.49%), Query Frame = 0


Query: 1   MEGIHRRPNKGGQSLEVIDVRNLCENKKYLNQSQKRTIVDPTFVKRHVNKTQESSKSSTK 60
           MEG+H  PNKGG+SLEVIDVR L  NK YLNQSQ+RT+VDP+FVK++V KT E SKS  K
Sbjct: 1   MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKTSEPSKSCMK 60

Query: 61  S-WWKAPEMKRRRRVAKYKLYAVEGKVKNSIKKGIKWFKTKCRRIISGF 109
             WWK PEM+RR+RVAKYKLY VEGKVK SIKKGI+W KTKC RIISGF
Sbjct: 61  KPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISGF 109

[Close]

BLAST of Lcy11g013460 vs. NCBI nr
Match: XP_022151002.1 (uncharacterized protein LOC111019023 [Momordica charantia])

HSP 1 Score: 159.1 bits (401), Expect = 2.2e-35
Identity = 81/110 (73.64%), Postives = 91/110 (82.73%), Query Frame = 0


Query: 1   MEGIHRRPNKGGQSLEVIDVRNLCENKKYLNQSQKRTIVD--PTFVKRHVNKTQESSKSS 60
           MEGIHRRP KGG+SLE+IDVRNL ENK  L+QS+ R  VD  P+  ++ + K  ESSKSS
Sbjct: 1   MEGIHRRPKKGGRSLEIIDVRNLSENKLSLSQSRSRAAVDPSPSTKRQAIKKPSESSKSS 60

Query: 61  TKSWWKAPEMKRRRRVAKYKLYAVEGKVKNSIKKGIKWFKTKCRRIISGF 109
            KSWWK PEMKRRRRVAKYKLY VEGKVKNSIKKGIKWFKT+C RI+SGF
Sbjct: 61  VKSWWKNPEMKRRRRVAKYKLYTVEGKVKNSIKKGIKWFKTRCSRIMSGF 110

[Close]

BLAST of Lcy11g013460 vs. NCBI nr
Match: KAA0032381.1 (hypothetical protein E6C27_scaffold219G002520 [Cucumis melo var. makuwa] >TYJ96369.1 hypothetical protein E5676_scaffold1159G00320 [Cucumis melo var. makuwa])

HSP 1 Score: 140.2 bits (352), Expect = 1.0e-29
Identity = 71/110 (64.55%), Postives = 88/110 (80.00%), Query Frame = 0


Query: 1   MEGIHRRPNKGGQSLEVIDVRNLCENKKYLNQSQKRTIVDPTFVK-RHVNKTQESSKSST 60
           ME +HRRPNKG ++L++IDVR L ENK +LNQS++ + +DP+ +K R +  T ESSK+ST
Sbjct: 3   MERVHRRPNKGDRNLKIIDVRKLSENKMHLNQSRRHSTIDPSSMKPRAIKTTSESSKAST 62

Query: 61  -KSWWKAPEMKRRRRVAKYKLYAVEGKVKNSIKKGIKWFKTKCRRIISGF 109
            K WWK  EMKRRRRVAKYKLY VEG+VK SI+KGI WFK +C RIISGF
Sbjct: 63  VKLWWKNSEMKRRRRVAKYKLYTVEGRVKESIRKGINWFKCRCTRIISGF 112

[Close]

BLAST of Lcy11g013460 vs. NCBI nr
Match: KAG6600771.1 (hypothetical protein SDJN03_06004, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 139.4 bits (350), Expect = 1.8e-29
Identity = 71/108 (65.74%), Postives = 81/108 (75.00%), Query Frame = 0


Query: 2   EGIHRRP-NKGGQSLEVIDVRNLCENKKYLNQSQKRTIVDPTFVKRHVNKTQESSKSSTK 61
           EGIH  P N    SLE +D   L +N  YLNQ QKR I+  +FVKRH+ KT ESSK ST+
Sbjct: 5   EGIHHHPHNSTDWSLEPMDENKLSDNNMYLNQPQKRVIISSSFVKRHIIKTSESSKRSTR 64

Query: 62  SWWKAPEMKRRRRVAKYKLYAVEGKVKNSIKKGIKWFKTKCRRIISGF 109
           SWWK P++KRRRRVAKY+ Y VEGKVK+SIKKGIKW KTKC RII GF
Sbjct: 65  SWWKNPKIKRRRRVAKYRFYTVEGKVKSSIKKGIKWLKTKCSRIIFGF 112

[Close]

BLAST of Lcy11g013460 vs. TAIR 10
Match: AT3G05725.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 66.2 bits (160), Expect = 1.8e-11
Identity = 32/60 (53.33%), Postives = 43/60 (71.67%), Query Frame = 0


Query: 50  KTQESSKSST--KSWWKAPEMKRRRRVAKYKLYAVEGKVKNSIKKGIKWFKTKCRRIISG 108
           + + SS  ST  K WW  PE+KR+RRVAKYKLY+ EGK+K +++K  KW K +C +II G
Sbjct: 64  RPRRSSSHSTLFKGWWNDPEIKRKRRVAKYKLYSAEGKMKITLRKSYKWIKIQCSKIIHG 123

[Close]

BLAST of Lcy11g013460 vs. TAIR 10
Match: AT2G47480.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 55.5 bits (132), Expect = 3.2e-08
Identity = 23/42 (54.76%), Postives = 33/42 (78.57%), Query Frame = 0


Query: 67  EMKRRRRVAKYKLYAVEGKVKNSIKKGIKWFKTKCRRIISGF 109
           EMKR++R+A+YK Y VEGKVK+++K G +W K KC +I+  F
Sbjct: 69  EMKRKKRIARYKAYTVEGKVKSTLKNGFRWIKNKCCQIVHRF 110

[Close]

BLAST of Lcy11g013460 vs. TAIR 10
Match: AT1G72720.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 52.0 bits (123), Expect = 3.5e-07
Identity = 28/71 (39.44%), Postives = 40/71 (56.34%), Query Frame = 0


Query: 40  DPTFVKRHVNKTQESSKSSTKSWWKA---PEMKRRRRVAKYKLYAVEGKVKNSIKKGIKW 99
           +PT V+   N   + S    K  +K     E++R++RVA Y +Y VEG+VK S+KK  KW
Sbjct: 55  NPTIVRDDSNNKSKRSNKVKKKGFKGLCEAEIQRKKRVASYNVYGVEGRVKGSMKKSFKW 114

Query: 100 FKTKCRRIISG 108
           FK  C   + G
Sbjct: 115 FKETCSNAVYG 125

[Close]

BLAST of Lcy11g013460 vs. TAIR 10
Match: AT2G19460.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 52.0 bits (123), Expect = 3.5e-07
Identity = 24/66 (36.36%), Postives = 40/66 (60.61%), Query Frame = 0


Query: 41  PTFVKRHVNKTQESSKSSTKSWWKAPEMKRRRRVAKYKLYAVEGKVKNSIKKGIKWFKTK 100
           PT +    N  +  S SS+   +  P+++R++RV  Y+ Y VEGK+K S +K  KW K K
Sbjct: 51  PTRIPEDQNPKKGRSSSSSSWGFVDPDLQRKKRVVSYRAYTVEGKLKGSFRKSFKWIKDK 110

Query: 101 CRRIIS 107
           C ++++
Sbjct: 111 CNKLLN 116

[Close]

BLAST of Lcy11g013460 vs. TAIR 10
Match: AT5G11970.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 50.4 bits (119), Expect = 1.0e-06
Identity = 24/58 (41.38%), Postives = 39/58 (67.24%), Query Frame = 0


Query: 52  QESSKSSTKSWW-KAPEMKRRRRVAKYKLYAVEGKVKNSIKKGIKWFKTKCRRIISGF 109
           +E S + +KSW    PE++R++RVA YK+Y VEGKVK S +   +W K +  +++ G+
Sbjct: 47  KEKSIARSKSWGITDPELQRKKRVASYKMYGVEGKVKGSFRNSFRWLKQRYTQVVYGW 104

The following BLAST results are available for this feature:

BLAST of Lcy11g013460 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy11g013460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BTT8	2.5e-37	75.93	DUF3511 domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold9...	[more]
A0A0A0L7N5	7.3e-37	74.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G077700 PE=4 SV=1	[more]
A0A6J1DCB3	1.1e-35	73.64	uncharacterized protein LOC111019023 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A5D3BBI7	5.1e-30	64.55	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0LL30	4.5e-26	62.73	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G123580 PE=4 SV=1	[more]

BLAST of Lcy11g013460 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0033960.1	5.2e-37	75.93	DUF3511 domain protein [Cucumis melo var. makuwa] >TYK02584.1 DUF3511 domain pro...	[more]
KGN56136.1	1.5e-36	74.31	hypothetical protein Csa_009524 [Cucumis sativus]	[more]
XP_022151002.1	2.2e-35	73.64	uncharacterized protein LOC111019023 [Momordica charantia]	[more]
KAA0032381.1	1.0e-29	64.55	hypothetical protein E6C27_scaffold219G002520 [Cucumis melo var. makuwa] >TYJ963...	[more]
KAG6600771.1	1.8e-29	65.74	hypothetical protein SDJN03_06004, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Lcy11g013460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05725.1	1.8e-11	53.33	Protein of unknown function (DUF3511)	[more]
AT2G47480.1	3.2e-08	54.76	Protein of unknown function (DUF3511)	[more]
AT1G72720.1	3.5e-07	39.44	Protein of unknown function (DUF3511)	[more]
AT2G19460.1	3.5e-07	36.36	Protein of unknown function (DUF3511)	[more]
AT5G11970.1	1.0e-06	41.38	Protein of unknown function (DUF3511)	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021899	Protein of unknown function DUF3511	PFAM	PF12023	DUF3511	coord: 63..107 e-value: 4.1E-22 score: 77.7
None	No IPR available	PANTHER	PTHR33193	DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATED	coord: 4..108
None	No IPR available	PANTHER	PTHR33193:SF13	DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATED	coord: 4..108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g013460.1	Lcy11g013460.1	mRNA