Lcy11g013310 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g013310
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	DDE Tnp4 domain-containing protein
Location	Chr11: 20847136 .. 20851257 (+)
RNA-Seq Expression	Lcy11g013310
Synteny	Lcy11g013310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGATTCATTGCTAATGAAGAACAAAGTAGAGATATCTTACGAATGGGCCCACTTGCATTTAAAAGACTAGTTTACATACTTAAAGGAACGGGATACCTTAAAGATAGTCAATATAGTTCTGTAGAGGAACAAGTAGCCAAGTTTTTGCATATTTTAGCTCACAATGTGAGAAATAGAACAATTGGATTTTTCTTCCGTCAATCAAGTGAAACAGTGAGTCGACATTTTCATCAAGTTTTAAAGGCAATTATCTCGTTGGAAGAAGAATACTTAGTTCAACCAAACGGGGTCTTCAATACCCCTTGAAATTCAAAATAGCACAAGATTTTTCCCATATTTCAAGGTAAATACTCTAAATCGAATGTCTCAATTTTGTTTACAATTAATATTCATATTAACTATAAACGAATATATATATATATATATATATATATATATATATAGGATTGTGTTGGGGCAATTGATGGAACACATTTGCATGTAAAAGTATCAAAAGAAAATGTATCAAGATTTAGAGGAAGAAAAGATTTTCCCACACAAAATGTTTTAGCGGCATGCACATTTAATTTAAGGTTCACGTGTGTGTTACCTGGATGGGAAGGATCTGCTTCAGATTCTCGAATTCTAGAAGATGCATTATTAAGAGAGGATAGTTTACAAATTCCTTCAGGTAGATATAAATATATTTATATTACTAATTCTTCCAAGGATATTTAACATAATTAAACAAAAATCATGAGGCTAAATATTATTTTGTAATTGTCGTTTATAGGAAAATATTATCTTGTTGATGCAGGGTTTATGTTGCAATTTGGGTTTATTACACCTTAACGTGGGAAAAGGTACCATCTAAAGGAGTATTCAACATGTGCACCACAATCTCCTAAAGAGTTATTTAATCACAGACATGCATCTTTAAGAAATGCAATTGAAAGAGCATTTGGAGTACTAAAGAAGAGGTTTCCAATTATAGCTAGTGGGACCAAACCACATTACAATTTTGAGACACAAACAGAAATAGTCATAACTTGTTGCATTATTCATAATTTTCTTATGAATTTTGATCCAGATGAGAGATTAATTACAGAAGTTGATAGTGAAATTATGGACAGTGAAATAGATATTGGTCCTATAGCATTAGTAAATTTAACCGAAGATGGACAAAGAGGTGAACAAATTCGAGATTCAATTGCAGCTCACATGTGGGGAGATTATTTGTCAGCTAATTAGATTTTTATATTTTCTTTCATTAATTTAGGGTTTAGGAAATCCATGTGACGAGAGCGTGTCACGGGGCTCGTGTCAAAACGAATTTATAGTCCACGATCACTAAACTACTTTGTAGTAGTAGTGGTCGGGGTCGAACACAGGGAGTGGCGGTTGGCTATTTATTTCCTATTTATTTTGAGTTATAAAAGCGATAAATGGGGGGATTGGAATATTAGAGAAATAGACGTGCAAGGAATTAAAATGCAGGAATTTAAAGAGACAAGAAATTAAAATGAGCAAGAAATTAAATTGCAGGAAACATAAATAGGCAAGAGAGTTAATTAAATCGAGCGATGCCGATTGGAGAGATTCTTGGGGGTTAAATGATTTAGTTTGATCTTTGTCTTCCTACTTATTTAAGGCTAGCTTGAATTGCTTAATTGCCCAATCGATCTAATCTGAACCCAGAAAAGACCCAAAGCCCACCTAAGTCATCTAACTCGATCATACACCGTCCATCGAATTAGACTCTAATTGATTAACCAATTAATCCGATTGAATCATCAAATCAAACAATCAACCAATTGCCTTAAGTCTAGTGGATTGATTAGGACATTAAAAATAATTAGGCCTAGATTACTTCTAACGCTATTTTGGATTCTAGACCTATCGTGTCAAGCAACAAAGTTAGAGTCTGCTCTTGGGACTCGTGCCCAAGAATCAATCTATGTGCTAACTATTGAACTAATAATCCATTAGCTACTTGGAAATCAATTCTTTAGCTTATTATTAACATACGAGCTGCGAGTTAGGGCGTCAATCTAACCTACTGCGCATGCTAATTATACATAGTGAATCCAAAATACAATTGCAATATGGAATCAAAAAGGGCATTCAGAACATGAAACTCACAAAGAAATACATTTTTATAACCCAATAATCATCCAATCGGCGTCAACGGGTTTAGGCGGCGGTTAAGCCGACTAAAACCCGCGACCATATGCTACAATAATAAAGAAATACAAGAGAAGTTAATAAGAAAACATACACCTCTGAGTTCTGGACATGGAGGACAGAGAATCGAGAGGAAAACCAAAAATTACAACCTAAAAACTCTCTCTAAATGGCGGAACAAAAGGGGGTTTTTATAGCAATTTAATCGTGGCATCGAGACACTGGGCATGGCGTCTCGACGCCTGGCCTACTTCCAGCGTGTCGCGTCTTTAATTCTTCTTCGTTTCTCGCTCGACTCAGGTCTCGAACCTTTGACTCCTTGGAACCATTCTTCACCATGACATCTATTAGCTTTTAATATTCAATTATTTTAATTTAATGTTTAGTTGTACTTATTTTATTGTAAATCTCTGATATTTTTGCTTCAATATAAATTTTAGTTCATTTAAAACATTTTGTTATTTATAAAAAAGTTTGAATATAAATTATACTTTTAATTTTTCAATATTGGTTGATGACAGAGTAATGGAAACTAGGGGTGAACATCGGTCGGTTGGCGACGGTTTTGGGCTCAAACCGACGCCGATCACCGACGTGTCAGTTTCCGGCGGTCAGTTTTTGTCGGTTTGGAAGGAAATGGTTACGCCGACCAACCGATGAAACCGACGGTCGGTCGATTGGGTCGGTTTTAAGAGTGCATAGTGAAGAAGAAATTAAAAAATTTAAAAAAAAAAAAAGAAAGAAAGAGGAAAAAAAATGGTGAAGATGAACACTCTAAGAGAAGAAGAAGATATAAAAAAAAGAAGAAGAAATGGAGAAGAAAGTAATAAGATGAAACCATAAAGAAAAAATAAGAAAAAAAAAGAAAGAAGATGACAAAGAAACTACAAAAACGAAAAGAGGAAAAACGATAAAAGAAAAAGAAAGAAAATGTAAAGAAGAAAAGAAAAAGATGAAAACCAGAAATAAGAGAAGGAGAAGAGTTTGAGAGGATTCAAGAAAAAAAAAAGAAACTAAAGTGTGAAAGTCTGAAAGAAAGATTGAAAAAAGATTGAAAGGGGTTAGGAAAAAAATTTTTAAAAAATATAATTTGAATTTACTTGGGAAGACCATCAGCCGATGGTCTTCCCAAAGGCGGTTGTTGCAGCCAACGCATTAAATGCACTACAGCAGAATGCAATCAGACGCACATTTAATTTTAATTTTTTTTCGGTCGGGTGTTGTCGATTCTCGCCTCTTTTGGGCGAGCCGACCGACCGAAAGTTCAGTTTTACATCCTGTAAAATCGACCCCGACCGAGATTATTAAAAAATCGACCGACTGACGCCGGTTCAGTCGGTTGGCTCGATTTTTTGGCTTTTCTTGCTCACCCCTAATGGAAACTTTGAGTGATAAAAAAAGGTACATTAGTTGGTCAATTGCGATGGACAAATACTTGCTTGAGATATTAAAAGAGCAGAAAGTGAGAGGCCAAAAGCCAGACAGGAATTTCACTAATGATGCATACCAAGCTGCAGTTGAAGGCTTAAACTCCAAATTTAAAATGGATTTATCTTAGGACAACATCATTAACCGTTTGAAGACTTTAAAAGAAAAAATGGCTATTGGACTTGAAGTCTTTCGACGTGGTAGTGGTTTTACTTGGAATAGCATCACATAAACTATTGAAGCAGAACAACCTGTTTGGGAGGTTTTGATTCAAGTAGCTATTACTTTTTTTATATATATACACATACCAATATTGATTTGTTCTTATAATTTTTTCCCCTTGACCAGTCTTATCCAAAAGCTCAACAAGTTCGAGGGATGCCAATTTACAACTTTGATGTCTTAAGAGAACTTTTTGAGAAAGACAGAGCAATTGGAGTATTTGCAGAGAGTGCAAAAGAGAAGGTACGTCGTTGGCAAAGGGACGAACCGTTGAATATTAATGACATTGATGAAATGATGGAATGA

mRNA sequence

ATGGGATTCATTGCTAATGAAGAACAAAGTAGAGATATCTTACGAATGGGCCCACTTGCATTTAAAAGACTAGTTTACATACTTAAAGGAACGGGATACCTTAAAGATAGTCAATATAGTTCTGTAGAGGAACAAGTAGCCAAGTTTTTGCATATTTTAGCTCACAATGTGAGAAATAGAACAATTGGATTTTTCTTCCGTCAATCAAGTGAAACAGATTGTGTTGGGGCAATTGATGGAACACATTTGCATGTAAAAGTATCAAAAGAAAATGTATCAAGATTTAGAGGAAGAAAAGATTTTCCCACACAAAATGTTTTAGCGGCATGCACATTTAATTTAAGGTTCACGTGTGTGTTACCTGGATGGGAAGGATCTGCTTCAGATTCTCGAATTCTAGAAGATGCATTATTAAGAGAGGATAGTTTACAAATTCCTTCAGATGAGAGATTAATTACAGAAGTTGATAGTGAAATTATGGACAGTGAAATAGATATTGGTCCTATAGCATTAGTAAATTTAACCGAAGATGGACAAAGAGCTCAACAAGTTCGAGGGATGCCAATTTACAACTTTGATGTCTTAAGAGAACTTTTTGAGAAAGACAGAGCAATTGGAGTATTTGCAGAGAGTGCAAAAGAGAAGGTACGTCGTTGGCAAAGGGACGAACCGTTGAATATTAATGACATTGATGAAATGATGGAATGA

Coding sequence (CDS)

ATGGGATTCATTGCTAATGAAGAACAAAGTAGAGATATCTTACGAATGGGCCCACTTGCATTTAAAAGACTAGTTTACATACTTAAAGGAACGGGATACCTTAAAGATAGTCAATATAGTTCTGTAGAGGAACAAGTAGCCAAGTTTTTGCATATTTTAGCTCACAATGTGAGAAATAGAACAATTGGATTTTTCTTCCGTCAATCAAGTGAAACAGATTGTGTTGGGGCAATTGATGGAACACATTTGCATGTAAAAGTATCAAAAGAAAATGTATCAAGATTTAGAGGAAGAAAAGATTTTCCCACACAAAATGTTTTAGCGGCATGCACATTTAATTTAAGGTTCACGTGTGTGTTACCTGGATGGGAAGGATCTGCTTCAGATTCTCGAATTCTAGAAGATGCATTATTAAGAGAGGATAGTTTACAAATTCCTTCAGATGAGAGATTAATTACAGAAGTTGATAGTGAAATTATGGACAGTGAAATAGATATTGGTCCTATAGCATTAGTAAATTTAACCGAAGATGGACAAAGAGCTCAACAAGTTCGAGGGATGCCAATTTACAACTTTGATGTCTTAAGAGAACTTTTTGAGAAAGACAGAGCAATTGGAGTATTTGCAGAGAGTGCAAAAGAGAAGGTACGTCGTTGGCAAAGGGACGAACCGTTGAATATTAATGACATTGATGAAATGATGGAATGA

Protein sequence

MGFIANEEQSRDILRMGPLAFKRLVYILKGTGYLKDSQYSSVEEQVAKFLHILAHNVRNRTIGFFFRQSSETDCVGAIDGTHLHVKVSKENVSRFRGRKDFPTQNVLAACTFNLRFTCVLPGWEGSASDSRILEDALLREDSLQIPSDERLITEVDSEIMDSEIDIGPIALVNLTEDGQRAQQVRGMPIYNFDVLRELFEKDRAIGVFAESAKEKVRRWQRDEPLNINDIDEMME

Homology

[Close]

BLAST of Lcy11g013310 vs. ExPASy TrEMBL
Match: A0A5J5BZ02 (DDE Tnp4 domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_004541 PE=3 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 6.2e-49
Identity = 115/278 (41.37%), Postives = 163/278 (58.63%), Query Frame = 0


Query: 4   IANEEQSRDILRMGPLAFKRLVYILKGTGYLKDSQYSSVEEQVAKFLHILAHNVRNRTIG 63
           +   E+ RDI+RMGP AF+ L  ILK  G L+ ++ +++EEQV  FLHI++HNV+NRTI 
Sbjct: 33  LKTNERCRDIIRMGPEAFENLCNILKKDGGLQPTKRTTIEEQVVNFLHIVSHNVKNRTIQ 92

Query: 64  FFFRQSSET-------------------------------------------DCVGAIDG 123
           FFFR+S ET                                           +C+GAIDG
Sbjct: 93  FFFRRSGETISRHFHNVLRSIISLEDTFLQQPDGSEIPPEIVFNSRFYPYFKNCIGAIDG 152

Query: 124 THLHVKVSKENVSRFRGRKDFPTQNVLAACTFNLRFTCVLPGWEGSASDSRILEDALLRE 183
           TH+ VKVS E+  R+RGRK++PTQNVLAAC+F+LRFT +LPGWEG+A+DSRI+++AL R+
Sbjct: 153 THVRVKVSNEDAPRYRGRKNYPTQNVLAACSFDLRFTYILPGWEGTAADSRIIKNALTRD 212

Query: 184 DSLQIPSDERLITEVDSEIMDSEIDIGPIALVNLTEDGQRAQQVRGMPIYNFDVLRELFE 235
           D+L+IP+ + L                            R ++ R  PI ++D L E+F 
Sbjct: 213 DNLKIPNRQNL----------------------------RIEKWRTTPINHYDKLCEMFA 272

[Close]

BLAST of Lcy11g013310 vs. ExPASy TrEMBL
Match: A0A6A6MDI8 (DDE Tnp4 domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_007620 PE=3 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 3.0e-43
Identity = 114/317 (35.96%), Postives = 158/317 (49.84%), Query Frame = 0


Query: 5   ANEEQSRDILRMGPLAFKRLVYILKGTGYLKDSQYSSVEEQVAKFLHILAHNVRNRTIGF 64
           ANE    DI+ MGP+AF      ++ TG LKD ++S+VEEQ+AKFLHIL  N +NR +GF
Sbjct: 27  ANEVICCDIVHMGPVAFAEFCGKIRATGLLKDFRHSTVEEQLAKFLHILGQNFKNRALGF 86

Query: 65  FFRQSSET---------------------------DCVGAIDGTHLHVKVSKENVSRFRG 124
           +F +S ET                           D VGA+DGTH+ VKV K++  RFRG
Sbjct: 87  YFHRSGETISRHFHNVLRAVVALEAEFLSLPNETEDGVGALDGTHIQVKVPKKHAPRFRG 146

Query: 125 RKDFPTQNVLAACTFNLRFTCVLPGWEGSASDSRILEDALLREDSLQIPS---------- 184
           RK++P QNVL AC+ +L+FT VLPGWEG+ASDSRIL++ L+RED L IP           
Sbjct: 147 RKEWPIQNVLVACSLDLKFTYVLPGWEGTASDSRILKNGLVREDKLVIPQGKFYLVDAGL 206

Query: 185 -------------------------------------------------DERLITEVDSE 236
                                                            DE LI EVD E
Sbjct: 207 PLRSGLLAPYRGVRYHLNKYSRCGPRNAKELFNHHHASFRNVIERVFDPDENLIAEVDRE 266

[Close]

BLAST of Lcy11g013310 vs. ExPASy TrEMBL
Match: A0A2Z6P3S4 (DDE Tnp4 domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_373070 PE=3 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 6.3e-41
Identity = 91/186 (48.92%), Postives = 115/186 (61.83%), Query Frame = 0


Query: 4   IANEEQSRDILRMGPLAFKRLVYILKGTGYLKDSQYSSVEEQVAKFLHILAHNVRNRTIG 63
           + + E+ RDI+RMGP AF  L + L+GTGY+KD+  S+VEEQVAKFLHI+  NV+NRT+ 
Sbjct: 27  LVHAEKCRDIIRMGPEAFMLLCHKLRGTGYVKDTIRSTVEEQVAKFLHIIGPNVKNRTVS 86

Query: 64  FFFRQSSET-------------------------------------------DCVGAIDG 123
           FFF    ET                                           DC+GAIDG
Sbjct: 87  FFFHHFGETVSRHFHNVLRAIISLEDEFLVQPSGRNVPPQILNNSRFYPFFKDCIGAIDG 146

Query: 124 THLHVKVSKENVSRFRGRKDFPTQNVLAACTFNLRFTCVLPGWEGSASDSRILEDALLRE 147
           TH+ VKV +    R+RGRKD+PTQNVLAAC F+++FT VL GWEG+ASDSRIL++AL RE
Sbjct: 147 THIRVKVPRAEAPRYRGRKDYPTQNVLAACNFDIKFTYVLLGWEGTASDSRILKNALSRE 206

[Close]

BLAST of Lcy11g013310 vs. ExPASy TrEMBL
Match: A0A438ISK9 (DDE Tnp4 domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_021521 PE=3 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 3.1e-40
Identity = 93/189 (49.21%), Postives = 121/189 (64.02%), Query Frame = 0


Query: 4   IANEEQSRDILRMGPLAFKRLVYILKGTGYLKDSQYSSVEEQVAKFLHILAHNVRNRTIG 63
           + + E   + LRMG  AF RLV IL+GT +L++S +S+VEEQVAKFLHI+ HN+RNRT+ 
Sbjct: 142 LMDNEDCYNQLRMGKDAFARLVNILQGTCHLRNSAHSNVEEQVAKFLHIVGHNLRNRTMK 201

Query: 64  FFFRQSSET-------------------------------------------DCVGAIDG 123
           F+F++SSET                                           DC+GAIDG
Sbjct: 202 FYFKRSSETVSRHFHQVLRAIISLDDVFLKQPDGLKCPQEIKDNTKFWPYFKDCIGAIDG 261

Query: 124 THLHVKVSKENVSRFRGRKDFPTQNVLAACTFNLRFTCVLPGWEGSASDSRILEDALLRE 149
           +H HVKVS E V R+RGRK +PTQNVLAAC+F+L+FT VLPGWEGS SDSRIL++AL+R+
Sbjct: 262 SHFHVKVSNEVVQRYRGRKYYPTQNVLAACSFDLKFTYVLPGWEGSTSDSRILDNALMRD 321

[Close]

BLAST of Lcy11g013310 vs. ExPASy TrEMBL
Match: A0A6P5N2A1 (uncharacterized protein LOC107475632 isoform X2 OS=Arachis duranensis OX=130453 GN=LOC107475632 PE=3 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 4.1e-40
Identity = 92/186 (49.46%), Postives = 113/186 (60.75%), Query Frame = 0


Query: 4   IANEEQSRDILRMGPLAFKRLVYILKGTGYLKDSQYSSVEEQVAKFLHILAHNVRNRTIG 63
           +   E+ RDI+RMGP AF++L   L+GTG +KDS  S+V EQVAKFLHI+ HNV+ RT+ 
Sbjct: 4   LLTSEKCRDIIRMGPEAFRQLCQKLRGTGRVKDSIRSTVVEQVAKFLHIIGHNVKTRTMS 63

Query: 64  FFFRQSSET-------------------------------------------DCVGAIDG 123
           FFF +S ET                                           DC+GAIDG
Sbjct: 64  FFFHRSGETISRHFHNVLHAILSLEGEFFKQPSGEDVPYEIRNNSRFYPFFKDCIGAIDG 123

Query: 124 THLHVKVSKENVSRFRGRKDFPTQNVLAACTFNLRFTCVLPGWEGSASDSRILEDALLRE 147
           TH  VKVS+    RFRGRKD PTQN+LAAC F+++FT VL GWEG+ASDSRIL+DAL RE
Sbjct: 124 THSRVKVSRVEAPRFRGRKDHPTQNILAACGFDMKFTYVLAGWEGTASDSRILKDALSRE 183

[Close]

BLAST of Lcy11g013310 vs. NCBI nr
Match: KAA8548198.1 (hypothetical protein F0562_004541 [Nyssa sinensis])

HSP 1 Score: 204.1 bits (518), Expect = 1.3e-48
Identity = 115/278 (41.37%), Postives = 163/278 (58.63%), Query Frame = 0


Query: 4   IANEEQSRDILRMGPLAFKRLVYILKGTGYLKDSQYSSVEEQVAKFLHILAHNVRNRTIG 63
           +   E+ RDI+RMGP AF+ L  ILK  G L+ ++ +++EEQV  FLHI++HNV+NRTI 
Sbjct: 33  LKTNERCRDIIRMGPEAFENLCNILKKDGGLQPTKRTTIEEQVVNFLHIVSHNVKNRTIQ 92

Query: 64  FFFRQSSET-------------------------------------------DCVGAIDG 123
           FFFR+S ET                                           +C+GAIDG
Sbjct: 93  FFFRRSGETISRHFHNVLRSIISLEDTFLQQPDGSEIPPEIVFNSRFYPYFKNCIGAIDG 152

Query: 124 THLHVKVSKENVSRFRGRKDFPTQNVLAACTFNLRFTCVLPGWEGSASDSRILEDALLRE 183
           TH+ VKVS E+  R+RGRK++PTQNVLAAC+F+LRFT +LPGWEG+A+DSRI+++AL R+
Sbjct: 153 THVRVKVSNEDAPRYRGRKNYPTQNVLAACSFDLRFTYILPGWEGTAADSRIIKNALTRD 212

Query: 184 DSLQIPSDERLITEVDSEIMDSEIDIGPIALVNLTEDGQRAQQVRGMPIYNFDVLRELFE 235
           D+L+IP+ + L                            R ++ R  PI ++D L E+F 
Sbjct: 213 DNLKIPNRQNL----------------------------RIEKWRTTPINHYDKLCEMFA 272

[Close]

BLAST of Lcy11g013310 vs. NCBI nr
Match: XP_028183115.1 (putative nuclease HARBI1 isoform X2 [Glycine soja] >XP_028203650.1 putative nuclease HARBI1 isoform X2 [Glycine soja])

HSP 1 Score: 195.3 bits (495), Expect = 6.0e-46
Identity = 98/186 (52.69%), Postives = 122/186 (65.59%), Query Frame = 0


Query: 4   IANEEQSRDILRMGPLAFKRLVYILKGTGYLKDSQYSSVEEQVAKFLHILAHNVRNRTIG 63
           + + E+ RDI+RMGP AF  L + L+GTGY+KD+  S+VEEQVAKFLHI+ HNV+NRT+ 
Sbjct: 4   LVHTEKCRDIIRMGPEAFMLLCHKLRGTGYVKDTIRSTVEEQVAKFLHIIGHNVKNRTVS 63

Query: 64  FFFRQSSET-------------------------------------------DCVGAIDG 123
           FFFR+S ET                                           DC+GAIDG
Sbjct: 64  FFFRRSGETVSRHFHNVLRAIISLEDEFLVQPSGRDVPPQILNNSRFYPFFKDCIGAIDG 123

Query: 124 THLHVKVSKENVSRFRGRKDFPTQNVLAACTFNLRFTCVLPGWEGSASDSRILEDALLRE 147
           TH+ VKV +   +RFRGRKD+PTQNVLAAC F+++FT VLPGWEG+ASDSRIL+DAL RE
Sbjct: 124 THIRVKVPRAEAARFRGRKDYPTQNVLAACNFDMKFTYVLPGWEGTASDSRILKDALSRE 183

[Close]

BLAST of Lcy11g013310 vs. NCBI nr
Match: XP_006575001.4 (putative nuclease HARBI1 [Glycine max])

HSP 1 Score: 195.3 bits (495), Expect = 6.0e-46
Identity = 98/186 (52.69%), Postives = 122/186 (65.59%), Query Frame = 0


Query: 4   IANEEQSRDILRMGPLAFKRLVYILKGTGYLKDSQYSSVEEQVAKFLHILAHNVRNRTIG 63
           + + E+ RDI+RMGP AF  L + L+GTGY+KD+  S+VEEQVAKFLHI+ HNV+NRT+ 
Sbjct: 31  LVHTEKCRDIIRMGPEAFMLLCHKLRGTGYVKDTIRSTVEEQVAKFLHIIGHNVKNRTVS 90

Query: 64  FFFRQSSET-------------------------------------------DCVGAIDG 123
           FFFR+S ET                                           DC+GAIDG
Sbjct: 91  FFFRRSGETVSRHFHNVLRAIISLEDEFLVQPSGRDVPPQILNNSRFYPFFKDCIGAIDG 150

Query: 124 THLHVKVSKENVSRFRGRKDFPTQNVLAACTFNLRFTCVLPGWEGSASDSRILEDALLRE 147
           TH+ VKV +   +RFRGRKD+PTQNVLAAC F+++FT VLPGWEG+ASDSRIL+DAL RE
Sbjct: 151 THIRVKVPRAEAARFRGRKDYPTQNVLAACNFDMKFTYVLPGWEGTASDSRILKDALSRE 210

[Close]

BLAST of Lcy11g013310 vs. NCBI nr
Match: RZB64881.1 (putative nuclease HARBI1 [Glycine soja])

HSP 1 Score: 195.3 bits (495), Expect = 6.0e-46
Identity = 98/186 (52.69%), Postives = 122/186 (65.59%), Query Frame = 0


Query: 4   IANEEQSRDILRMGPLAFKRLVYILKGTGYLKDSQYSSVEEQVAKFLHILAHNVRNRTIG 63
           + + E+ RDI+RMGP AF  L + L+GTGY+KD+  S+VEEQVAKFLHI+ HNV+NRT+ 
Sbjct: 4   LVHTEKCRDIIRMGPEAFMLLCHKLRGTGYVKDTIRSTVEEQVAKFLHIIGHNVKNRTVS 63

Query: 64  FFFRQSSET-------------------------------------------DCVGAIDG 123
           FFFR+S ET                                           DC+GAIDG
Sbjct: 64  FFFRRSGETVSRHFHNVLRAIISLEDEFLVQPSGRDVPPQILNNSRFYPFFKDCIGAIDG 123

Query: 124 THLHVKVSKENVSRFRGRKDFPTQNVLAACTFNLRFTCVLPGWEGSASDSRILEDALLRE 147
           TH+ VKV +   +RFRGRKD+PTQNVLAAC F+++FT VLPGWEG+ASDSRIL+DAL RE
Sbjct: 124 THIRVKVPRAEAARFRGRKDYPTQNVLAACNFDMKFTYVLPGWEGTASDSRILKDALSRE 183

[Close]

BLAST of Lcy11g013310 vs. NCBI nr
Match: XP_006589220.3 (putative nuclease HARBI1 [Glycine max] >XP_006597779.3 putative nuclease HARBI1 [Glycine max] >RZB63302.1 putative nuclease HARBI1 [Glycine soja] >RZB85822.1 putative nuclease HARBI1 [Glycine soja])

HSP 1 Score: 195.3 bits (495), Expect = 6.0e-46
Identity = 98/186 (52.69%), Postives = 122/186 (65.59%), Query Frame = 0


Query: 4   IANEEQSRDILRMGPLAFKRLVYILKGTGYLKDSQYSSVEEQVAKFLHILAHNVRNRTIG 63
           + + E+ RDI+RMGP AF  L + L+GTGY+KD+  S+VEEQVAKFLHI+ HNV+NRT+ 
Sbjct: 94  LVHTEKCRDIIRMGPEAFMLLCHKLRGTGYVKDTIRSTVEEQVAKFLHIIGHNVKNRTVS 153

Query: 64  FFFRQSSET-------------------------------------------DCVGAIDG 123
           FFFR+S ET                                           DC+GAIDG
Sbjct: 154 FFFRRSGETVSRHFHNVLRAIISLEDEFLVQPSGRDVPPQILNNSRFYPFFKDCIGAIDG 213

Query: 124 THLHVKVSKENVSRFRGRKDFPTQNVLAACTFNLRFTCVLPGWEGSASDSRILEDALLRE 147
           TH+ VKV +   +RFRGRKD+PTQNVLAAC F+++FT VLPGWEG+ASDSRIL+DAL RE
Sbjct: 214 THIRVKVPRAEAARFRGRKDYPTQNVLAACNFDMKFTYVLPGWEGTASDSRILKDALSRE 273

[Close]

BLAST of Lcy11g013310 vs. TAIR 10
Match: AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 101.3 bits (251), Expect = 1.1e-21
Identity = 62/184 (33.70%), Postives = 84/184 (45.65%), Query Frame = 0


Query: 8   EQSRDILRMGPLAFKRLVYILKGTGYLKDSQYSSVEEQVAKFLHILAHNVRNRTIGFFFR 67
           EQ  +  RM    F +L  +L+  G L+ +    +E Q+A FL I+ HN+R R +   F 
Sbjct: 40  EQCFENFRMDKPVFYKLCDLLQTRGLLRHTNRIKIEAQLAIFLFIIGHNLRTRAVQELFC 99

Query: 68  QSSET-------------------------------------DCVGAIDGTHLHVKVSKE 127
            S ET                                     DCVG +D  H+ V V  +
Sbjct: 100 YSGETISRHFNNVLNAVIAISKDFFQPNSNSDTLENDDPYFKDCVGVVDSFHIPVMVGVD 159

Query: 128 NVSRFRGRKDFPTQNVLAACTFNLRFTCVLPGWEGSASDSRILEDALLREDSLQIPSDER 155
               FR      TQNVLAA +F+LRF  VL GWEGSASD ++L  AL R + LQ+P  + 
Sbjct: 160 EQGPFRNGNGLLTQNVLAASSFDLRFNYVLAGWEGSASDQQVLNAALTRRNKLQVPQGKY 219

[Close]

BLAST of Lcy11g013310 vs. TAIR 10
Match: AT5G28950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 448 Blast hits to 446 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 21; Plants - 396; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 90.9 bits (224), Expect = 1.5e-18
Identity = 49/109 (44.95%), Postives = 67/109 (61.47%), Query Frame = 0


Query: 73  DCVGAIDGTHLHVKVSKENVSRFRGRKDFPTQNVLAACTFNLRFTCVLPGWEGSASDSRI 132
           DCVGAID TH+   VS++ +  FR RK   +QN+LAAC F++ F  VL GWEGSA DS++
Sbjct: 24  DCVGAIDDTHIFAMVSQKKMPSFRNRKGDISQNMLAACNFDVEFMYVLSGWEGSAHDSKV 83

Query: 133 LEDALLREDS-LQIPSDERLITEVDSEIMDSEIDIGPIALVNLTEDGQR 181
           L DAL R  + L +P ++    EV  E+ D+  +      V  T+D QR
Sbjct: 84  LNDALTRNSNRLPVPEEDESAEEVVEEVNDNNDE------VLTTQDQQR 126

[Close]

BLAST of Lcy11g013310 vs. TAIR 10
Match: AT1G43722.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 62.0 bits (149), Expect = 7.4e-10
Identity = 47/184 (25.54%), Postives = 71/184 (38.59%), Query Frame = 0


Query: 13  ILRMGPLAFKRLVYILKGTGYLKDSQYSSVEEQVAKFLHILAHNVRNRTIGFFFRQSSET 72
           +LRM    F  L  +L+    L+ +   S+EE VA FL I  HN   R +G  F ++ ET
Sbjct: 69  LLRMSLPCFTTLCNMLQTNYDLQPTLNISIEESVAMFLRICGHNEVYRDVGLRFGRNQET 128

Query: 73  ----------------------------------------------DCVGAIDGTHLHVK 132
                                                           VGA+DGTH+ VK
Sbjct: 129 VQRKFREVLTATELLACDYIRTPTRQELYRIPERLQVDQRYWPYFSGFVGAMDGTHVCVK 188

Query: 133 VSKENVSRFRGRKDFPTQNVLAACTFNLRFTCVLPGWEGSASDSRILEDALLREDSLQIP 151
           V  +    +  R D  + N++A C   + FT +  G  GS  D+ +L+ A   +    +P
Sbjct: 189 VKPDLQGMYWNRHDNASLNIMAICDLKMLFTYIWNGAPGSCYDTAVLQIAQQSDSEFPLP 248

The following BLAST results are available for this feature:

BLAST of Lcy11g013310 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy11g013310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5J5BZ02	6.2e-49	41.37	DDE Tnp4 domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_004541 P...	[more]
A0A6A6MDI8	3.0e-43	35.96	DDE Tnp4 domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_007620...	[more]
A0A2Z6P3S4	6.3e-41	48.92	DDE Tnp4 domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_373...	[more]
A0A438ISK9	3.1e-40	49.21	DDE Tnp4 domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_021521 PE...	[more]
A0A6P5N2A1	4.1e-40	49.46	uncharacterized protein LOC107475632 isoform X2 OS=Arachis duranensis OX=130453 ...	[more]

BLAST of Lcy11g013310 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA8548198.1	1.3e-48	41.37	hypothetical protein F0562_004541 [Nyssa sinensis]	[more]
XP_028183115.1	6.0e-46	52.69	putative nuclease HARBI1 isoform X2 [Glycine soja] >XP_028203650.1 putative nucl...	[more]
XP_006575001.4	6.0e-46	52.69	putative nuclease HARBI1 [Glycine max]	[more]
RZB64881.1	6.0e-46	52.69	putative nuclease HARBI1 [Glycine soja]	[more]
XP_006589220.3	6.0e-46	52.69	putative nuclease HARBI1 [Glycine max] >XP_006597779.3 putative nuclease HARBI1 ...	[more]

BLAST of Lcy11g013310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G41980.1	1.1e-21	33.70	CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int...	[more]
AT5G28950.1	1.5e-18	44.95	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G43722.1	7.4e-10	25.54	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027806	Harbinger transposase-derived nuclease domain	PFAM	PF13359	DDE_Tnp_4	coord: 78..138 e-value: 1.4E-7 score: 31.3
None	No IPR available	PANTHER	PTHR22930:SF211	NUCLEASE HARBI1-RELATED	coord: 72..148
None	No IPR available	PANTHER	PTHR22930	UNCHARACTERIZED	coord: 6..72 coord: 72..148
None	No IPR available	PANTHER	PTHR22930:SF211	NUCLEASE HARBI1-RELATED	coord: 6..72

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g013310.1	Lcy11g013310.1	mRNA