Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAACTCGGCCACCTCCAGAATCTGCACCTACGAGCAGGGGGATCGGGATCGGGATCGAGCGACGTCGTTTCATCAAGACAGTGGTTGGACTTCCTCCATGGACGATCTGCTCTTGTTCGACCATACTAGTGCAACTTCCTACCACGACCACCATAATTCTCATCTCCTCTTTTCTTCTTCTTCTCATGATGATTTCCGAACGGCCACCTCCCACGGCGGAGCTCAGCCTTCCGCCTCCTCCCGACCCAAGCGGAGGAAGATCAAGGCAGTCGATGATGATCTTGAAGATACTGCAACTTCTCCGCCTCATCCTACCATAAGTTCCAAGGTCTTTTCTCCTATAATTCTAACTATATTATTATTACATGAGTCCAAGTTGGTTTTTTTTTTTTTTTTTTAATCAGATGGGTTGGCTTAGTTGTAAGCAAAAGAAGAAGCAGAGGAGAATGATGACTCAAGCAAAACAGAAGGTTTGTGAACTTTACTTTGAAAAAATGTGTGTTTTTGGTATTAGAACTTTATTCTAAGATGAATAGATGTAACTGTGTGTTTTTGGGGTTTTTGTTTTTGCAGGGAAGAGAAAGTGAAGAATATGGGGAGGTTGAAGATAGAATTGAAGTGGGTTTTGTGGGGAGGGATAAGAACTGTACCACAGGGCTTAAGCATGTTGGCCTTTGTTTAGTTCCTCTATCCATGGCTCTCAATTATTTTGGTTAGGCTTTTCCTTTTTC
mRNA sequence
ATGGAAAACTCGGCCACCTCCAGAATCTGCACCTACGAGCAGGGGGATCGGGATCGGGATCGAGCGACGTCGTTTCATCAAGACAGTGGTTGGACTTCCTCCATGGACGATCTGCTCTTGTTCGACCATACTAGTGCAACTTCCTACCACGACCACCATAATTCTCATCTCCTCTTTTCTTCTTCTTCTCATGATGATTTCCGAACGGCCACCTCCCACGGCGGAGCTCAGCCTTCCGCCTCCTCCCGACCCAAGCGGAGGAAGATCAAGGCAGTCGATGATGATCTTGAAGATACTGCAACTTCTCCGCCTCATCCTACCATAAGTTCCAAGATGGGTTGGCTTAGTTGTAAGCAAAAGAAGAAGCAGAGGAGAATGATGACTCAAGCAAAACAGAAGGGAAGAGAAAGTGAAGAATATGGGGAGGTTGAAGATAGAATTGAAGTGGGTTTTGTGGGGAGGGATAAGAACTGTACCACAGGGCTTAAGCATGTTGGCCTTTGTTTAGTTCCTCTATCCATGGCTCTCAATTATTTTGGTTAGGCTTTTCCTTTTTC
Coding sequence (CDS)
ATGGAAAACTCGGCCACCTCCAGAATCTGCACCTACGAGCAGGGGGATCGGGATCGGGATCGAGCGACGTCGTTTCATCAAGACAGTGGTTGGACTTCCTCCATGGACGATCTGCTCTTGTTCGACCATACTAGTGCAACTTCCTACCACGACCACCATAATTCTCATCTCCTCTTTTCTTCTTCTTCTCATGATGATTTCCGAACGGCCACCTCCCACGGCGGAGCTCAGCCTTCCGCCTCCTCCCGACCCAAGCGGAGGAAGATCAAGGCAGTCGATGATGATCTTGAAGATACTGCAACTTCTCCGCCTCATCCTACCATAAGTTCCAAGATGGGTTGGCTTAGTTGTAAGCAAAAGAAGAAGCAGAGGAGAATGATGACTCAAGCAAAACAGAAGGGAAGAGAAAGTGAAGAATATGGGGAGGTTGAAGATAGAATTGAAGTGGGTTTTGTGGGGAGGGATAAGAACTGTACCACAGGGCTTAAGCATGTTGGCCTTTGTTTAGTTCCTCTATCCATGGCTCTCAATTATTTTGGTTAG
Protein sequence
MENSATSRICTYEQGDRDRDRATSFHQDSGWTSSMDDLLLFDHTSATSYHDHHNSHLLFSSSSHDDFRTATSHGGAQPSASSRPKRRKIKAVDDDLEDTATSPPHPTISSKMGWLSCKQKKKQRRMMTQAKQKGRESEEYGEVEDRIEVGFVGRDKNCTTGLKHVGLCLVPLSMALNYFG
Homology
BLAST of Lcy11g013130 vs. ExPASy TrEMBL
Match:
A0A0A0L2F7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G078270 PE=4 SV=1)
HSP 1 Score: 176.4 bits (446), Expect = 1.1e-40
Identity = 113/191 (59.16%), Postives = 132/191 (69.11%), Query Frame = 0
Query: 1 MENSATSRICTYEQGDRDRDRATSFHQDSGW--TSSMDDLLLFDHTSATSYHDHHNSHLL 60
MENSATSRIC++ + D FH+D W +SSMDDLL+FD + T
Sbjct: 1 MENSATSRICSHREEDTCE---PMFHEDRSWSTSSSMDDLLMFDVRTTT----------- 60
Query: 61 FSSSSHDDFRT-----ATSHGGAQPSASS-RPKRRKIKAVDDDLEDTATSPPHPTISSKM 120
SSS++ F+T + GGAQPSASS R KRRK+ A DDDLEDTATSPPHP+I SKM
Sbjct: 61 -HSSSYESFQTSLCCSSAVDGGAQPSASSFRLKRRKM-AADDDLEDTATSPPHPSIVSKM 120
Query: 121 GWLSCKQKKKQRRMMTQAKQKGRESEEYGEVEDRI-EVGFVGRDKN---CTTGLKHVGLC 180
S KQ+KKQR MM Q K KG SE+YGEVEDRI EVGFVGRD N C+TGLK++GLC
Sbjct: 121 DERSSKQQKKQRAMMNQTKHKGNGSEDYGEVEDRITEVGFVGRDNNKNHCSTGLKNIGLC 175
BLAST of Lcy11g013130 vs. ExPASy TrEMBL
Match:
A0A5D3BKS2 (Putative CTD small phosphatase-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1112G00160 PE=4 SV=1)
HSP 1 Score: 167.5 bits (423), Expect = 5.0e-38
Identity = 111/191 (58.12%), Postives = 132/191 (69.11%), Query Frame = 0
Query: 1 MENSATSRICTYEQGDRDRDRATSFHQDSGW--TSSMDDLLLFDHTSATSYHDHHNSHLL 60
MENSA SRIC++ G+ DR AT FH+D W +SSMDDLL+FD S
Sbjct: 1 MENSANSRICSH--GEEDRCEAT-FHEDPSWSTSSSMDDLLMFDVRST------------ 60
Query: 61 FSSSSHDDFRT-----ATSHGGAQPSASS-RPKRRKIKAVDDDLEDTATSPPHPTISSKM 120
SSS++ F+T + GGAQ SASS R KRRK+ A DDDLEDTATSPPHP+I SKM
Sbjct: 61 IHSSSYEFFQTRLCCSSAVDGGAQASASSFRLKRRKM-AADDDLEDTATSPPHPSIVSKM 120
Query: 121 GWLSCKQKKKQRRMMTQAKQKGRESEEYGEVEDR-IEVGFVGRDKN---CTTGLKHVGLC 180
S KQ+KKQR + Q K KG+ SE+YGEVEDR I+VG VGRD N C+TGLK++GLC
Sbjct: 121 DEPSSKQQKKQRATINQTKHKGKGSEDYGEVEDRIIQVGVVGRDNNKNYCSTGLKNIGLC 175
BLAST of Lcy11g013130 vs. ExPASy TrEMBL
Match:
A0A1S3CKU1 (uncharacterized protein LOC103501601 OS=Cucumis melo OX=3656 GN=LOC103501601 PE=4 SV=1)
HSP 1 Score: 167.5 bits (423), Expect = 5.0e-38
Identity = 111/191 (58.12%), Postives = 132/191 (69.11%), Query Frame = 0
Query: 1 MENSATSRICTYEQGDRDRDRATSFHQDSGW--TSSMDDLLLFDHTSATSYHDHHNSHLL 60
MENSA SRIC++ G+ DR AT FH+D W +SSMDDLL+FD S
Sbjct: 1 MENSANSRICSH--GEEDRCEAT-FHEDPSWSTSSSMDDLLMFDVRST------------ 60
Query: 61 FSSSSHDDFRT-----ATSHGGAQPSASS-RPKRRKIKAVDDDLEDTATSPPHPTISSKM 120
SSS++ F+T + GGAQ SASS R KRRK+ A DDDLEDTATSPPHP+I SKM
Sbjct: 61 IHSSSYEFFQTRLCCSSAVDGGAQASASSFRLKRRKM-AADDDLEDTATSPPHPSIVSKM 120
Query: 121 GWLSCKQKKKQRRMMTQAKQKGRESEEYGEVEDR-IEVGFVGRDKN---CTTGLKHVGLC 180
S KQ+KKQR + Q K KG+ SE+YGEVEDR I+VG VGRD N C+TGLK++GLC
Sbjct: 121 DEPSSKQQKKQRATINQTKHKGKGSEDYGEVEDRIIQVGVVGRDNNKNYCSTGLKNIGLC 175
BLAST of Lcy11g013130 vs. ExPASy TrEMBL
Match:
A0A6J1JN91 (uncharacterized protein LOC111486825 OS=Cucurbita maxima OX=3661 GN=LOC111486825 PE=4 SV=1)
HSP 1 Score: 165.2 bits (417), Expect = 2.5e-37
Identity = 99/184 (53.80%), Postives = 120/184 (65.22%), Query Frame = 0
Query: 1 MENSATSRICTYEQGDRDRDRATSFHQDSGWTSSMDDLLLFDHTSATSYHDHHNSHLLFS 60
MENSA S+ICT +Q D+D S WTSSMDDLLLFD++ TSY H + +FS
Sbjct: 1 MENSAISKICTQKQVDQDH---------SSWTSSMDDLLLFDYSKTTSY--HFQNAAVFS 60
Query: 61 SSSHDDFRTATSHGGAQPSASSRPKRRKIKAVDDDLEDTATSPPHPTISSKMGWLSCKQK 120
SS DD DDDL+DTATSPPHP+I S M LS KQK
Sbjct: 61 SS--DD--------------------------DDDLQDTATSPPHPSIISDMDGLSSKQK 120
Query: 121 KKQRR----MMTQAKQKGRESEEYGEVEDRIEVGFVGRDKNCTTGLKHVGLCLVPLSMAL 180
K+Q++ M+ Q K +G+E EE+GEVEDRIEVGFVGRD NC+TGLK++GLCLVP+SMA+
Sbjct: 121 KQQQQQHTAMINQTKHRGKEIEEFGEVEDRIEVGFVGRDNNCSTGLKNIGLCLVPVSMAI 145
BLAST of Lcy11g013130 vs. ExPASy TrEMBL
Match:
A0A6J1FU25 (uncharacterized protein LOC111446888 OS=Cucurbita moschata OX=3662 GN=LOC111446888 PE=4 SV=1)
HSP 1 Score: 163.7 bits (413), Expect = 7.2e-37
Identity = 98/185 (52.97%), Postives = 116/185 (62.70%), Query Frame = 0
Query: 1 MENSATSRICTYEQGDRDRDRATSFHQDSGWTSSMDDLLLFDHTSATSYHDHHNSHLLFS 60
MENSA SRICT +Q D+D S WTSSMDDLLLFDH+ SY H + +FS
Sbjct: 1 MENSAISRICTQKQVDQDH---------SSWTSSMDDLLLFDHSKTISY--HFQNAAVFS 60
Query: 61 SSSHDDFRTATSHGGAQPSASSRPKRRKIKAVDDDLEDTATSPPHPTISSKMGWLSCKQK 120
SS DDDL+DTATSPPHP+I S M LS KQK
Sbjct: 61 SSD-----------------------------DDDLQDTATSPPHPSIISDMDGLSSKQK 120
Query: 121 KKQRR-----MMTQAKQKGRESEEYGEVEDRIEVGFVGRDKNCTTGLKHVGLCLVPLSMA 180
K+ ++ M+ Q K KG+E EE+GEVEDRIEVGFVGRD NC+TGLK++GLCLVP+SMA
Sbjct: 121 KQLQQQQLSAMINQTKHKGKEIEEFGEVEDRIEVGFVGRDNNCSTGLKNIGLCLVPVSMA 145
BLAST of Lcy11g013130 vs. NCBI nr
Match:
XP_011652737.2 (uncharacterized protein LOC105435073 [Cucumis sativus] >KGN56145.1 hypothetical protein Csa_009500 [Cucumis sativus])
HSP 1 Score: 176.4 bits (446), Expect = 2.2e-40
Identity = 113/191 (59.16%), Postives = 132/191 (69.11%), Query Frame = 0
Query: 1 MENSATSRICTYEQGDRDRDRATSFHQDSGW--TSSMDDLLLFDHTSATSYHDHHNSHLL 60
MENSATSRIC++ + D FH+D W +SSMDDLL+FD + T
Sbjct: 1 MENSATSRICSHREEDTCE---PMFHEDRSWSTSSSMDDLLMFDVRTTT----------- 60
Query: 61 FSSSSHDDFRT-----ATSHGGAQPSASS-RPKRRKIKAVDDDLEDTATSPPHPTISSKM 120
SSS++ F+T + GGAQPSASS R KRRK+ A DDDLEDTATSPPHP+I SKM
Sbjct: 61 -HSSSYESFQTSLCCSSAVDGGAQPSASSFRLKRRKM-AADDDLEDTATSPPHPSIVSKM 120
Query: 121 GWLSCKQKKKQRRMMTQAKQKGRESEEYGEVEDRI-EVGFVGRDKN---CTTGLKHVGLC 180
S KQ+KKQR MM Q K KG SE+YGEVEDRI EVGFVGRD N C+TGLK++GLC
Sbjct: 121 DERSSKQQKKQRAMMNQTKHKGNGSEDYGEVEDRITEVGFVGRDNNKNHCSTGLKNIGLC 175
BLAST of Lcy11g013130 vs. NCBI nr
Match:
XP_008463437.1 (PREDICTED: uncharacterized protein LOC103501601 [Cucumis melo] >TYK00353.1 putative CTD small phosphatase-like protein 2 [Cucumis melo var. makuwa])
HSP 1 Score: 167.5 bits (423), Expect = 1.0e-37
Identity = 111/191 (58.12%), Postives = 132/191 (69.11%), Query Frame = 0
Query: 1 MENSATSRICTYEQGDRDRDRATSFHQDSGW--TSSMDDLLLFDHTSATSYHDHHNSHLL 60
MENSA SRIC++ G+ DR AT FH+D W +SSMDDLL+FD S
Sbjct: 1 MENSANSRICSH--GEEDRCEAT-FHEDPSWSTSSSMDDLLMFDVRST------------ 60
Query: 61 FSSSSHDDFRT-----ATSHGGAQPSASS-RPKRRKIKAVDDDLEDTATSPPHPTISSKM 120
SSS++ F+T + GGAQ SASS R KRRK+ A DDDLEDTATSPPHP+I SKM
Sbjct: 61 IHSSSYEFFQTRLCCSSAVDGGAQASASSFRLKRRKM-AADDDLEDTATSPPHPSIVSKM 120
Query: 121 GWLSCKQKKKQRRMMTQAKQKGRESEEYGEVEDR-IEVGFVGRDKN---CTTGLKHVGLC 180
S KQ+KKQR + Q K KG+ SE+YGEVEDR I+VG VGRD N C+TGLK++GLC
Sbjct: 121 DEPSSKQQKKQRATINQTKHKGKGSEDYGEVEDRIIQVGVVGRDNNKNYCSTGLKNIGLC 175
BLAST of Lcy11g013130 vs. NCBI nr
Match:
KAG7031402.1 (hypothetical protein SDJN02_05442, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 165.6 bits (418), Expect = 3.9e-37
Identity = 99/185 (53.51%), Postives = 117/185 (63.24%), Query Frame = 0
Query: 1 MENSATSRICTYEQGDRDRDRATSFHQDSGWTSSMDDLLLFDHTSATSYHDHHNSHLLFS 60
MENSA SRICT +Q D D S WTSSMDDLLLFDH+ SYH + + +FS
Sbjct: 1 MENSAISRICTQKQVDEDH---------SSWTSSMDDLLLFDHSKTISYHIQNAA--VFS 60
Query: 61 SSSHDDFRTATSHGGAQPSASSRPKRRKIKAVDDDLEDTATSPPHPTISSKMGWLSCKQK 120
SS DDDL+DTATSPPHP+I S M LS KQK
Sbjct: 61 SSD-----------------------------DDDLQDTATSPPHPSIISDMDGLSSKQK 120
Query: 121 KKQRR-----MMTQAKQKGRESEEYGEVEDRIEVGFVGRDKNCTTGLKHVGLCLVPLSMA 180
K+Q++ M+ Q K KG+E EE+GEVEDRIEVGFVGRD NC+TGLK++GLCLVP+SMA
Sbjct: 121 KQQQQQQLSAMINQTKHKGKEIEEFGEVEDRIEVGFVGRDNNCSTGLKNIGLCLVPVSMA 145
BLAST of Lcy11g013130 vs. NCBI nr
Match:
XP_022989755.1 (uncharacterized protein LOC111486825 [Cucurbita maxima])
HSP 1 Score: 165.2 bits (417), Expect = 5.1e-37
Identity = 99/184 (53.80%), Postives = 120/184 (65.22%), Query Frame = 0
Query: 1 MENSATSRICTYEQGDRDRDRATSFHQDSGWTSSMDDLLLFDHTSATSYHDHHNSHLLFS 60
MENSA S+ICT +Q D+D S WTSSMDDLLLFD++ TSY H + +FS
Sbjct: 1 MENSAISKICTQKQVDQDH---------SSWTSSMDDLLLFDYSKTTSY--HFQNAAVFS 60
Query: 61 SSSHDDFRTATSHGGAQPSASSRPKRRKIKAVDDDLEDTATSPPHPTISSKMGWLSCKQK 120
SS DD DDDL+DTATSPPHP+I S M LS KQK
Sbjct: 61 SS--DD--------------------------DDDLQDTATSPPHPSIISDMDGLSSKQK 120
Query: 121 KKQRR----MMTQAKQKGRESEEYGEVEDRIEVGFVGRDKNCTTGLKHVGLCLVPLSMAL 180
K+Q++ M+ Q K +G+E EE+GEVEDRIEVGFVGRD NC+TGLK++GLCLVP+SMA+
Sbjct: 121 KQQQQQHTAMINQTKHRGKEIEEFGEVEDRIEVGFVGRDNNCSTGLKNIGLCLVPVSMAI 145
BLAST of Lcy11g013130 vs. NCBI nr
Match:
KAG6600765.1 (hypothetical protein SDJN03_05998, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 164.9 bits (416), Expect = 6.6e-37
Identity = 99/187 (52.94%), Postives = 117/187 (62.57%), Query Frame = 0
Query: 1 MENSATSRICTYEQGDRDRDRATSFHQDSGWTSSMDDLLLFDHTSATSYHDHHNSHLLFS 60
MENSA SRICT +Q D D S WTSSMDDLLLFDH+ SYH + + +FS
Sbjct: 1 MENSAISRICTQKQVDEDH---------SSWTSSMDDLLLFDHSKTISYHIQNAA--VFS 60
Query: 61 SSSHDDFRTATSHGGAQPSASSRPKRRKIKAVDDDLEDTATSPPHPTISSKMGWLSCKQK 120
SS DDDL+DTATSPPHP+I S M LS KQK
Sbjct: 61 SSD-----------------------------DDDLQDTATSPPHPSIISDMDGLSSKQK 120
Query: 121 KKQRR-------MMTQAKQKGRESEEYGEVEDRIEVGFVGRDKNCTTGLKHVGLCLVPLS 180
K+Q++ M+ Q K KG+E EE+GEVEDRIEVGFVGRD NC+TGLK++GLCLVP+S
Sbjct: 121 KQQQQQQQQLSAMINQTKHKGKEIEEFGEVEDRIEVGFVGRDNNCSTGLKNIGLCLVPVS 147
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0L2F7 | 1.1e-40 | 59.16 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G078270 PE=4 SV=1 | [more] |
| A0A5D3BKS2 | 5.0e-38 | 58.12 | Putative CTD small phosphatase-like protein 2 OS=Cucumis melo var. makuwa OX=119... | [more] |
| A0A1S3CKU1 | 5.0e-38 | 58.12 | uncharacterized protein LOC103501601 OS=Cucumis melo OX=3656 GN=LOC103501601 PE=... | [more] |
| A0A6J1JN91 | 2.5e-37 | 53.80 | uncharacterized protein LOC111486825 OS=Cucurbita maxima OX=3661 GN=LOC111486825... | [more] |
| A0A6J1FU25 | 7.2e-37 | 52.97 | uncharacterized protein LOC111446888 OS=Cucurbita moschata OX=3662 GN=LOC1114468... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_011652737.2 | 2.2e-40 | 59.16 | uncharacterized protein LOC105435073 [Cucumis sativus] >KGN56145.1 hypothetical ... | [more] |
| XP_008463437.1 | 1.0e-37 | 58.12 | PREDICTED: uncharacterized protein LOC103501601 [Cucumis melo] >TYK00353.1 putat... | [more] |
| KAG7031402.1 | 3.9e-37 | 53.51 | hypothetical protein SDJN02_05442, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| XP_022989755.1 | 5.1e-37 | 53.80 | uncharacterized protein LOC111486825 [Cucurbita maxima] | [more] |
| KAG6600765.1 | 6.6e-37 | 52.94 | hypothetical protein SDJN03_05998, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
