Lcy11g012900 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g012900
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Unknown protein
Location	Chr11: 19241105 .. 19243607 (+)
RNA-Seq Expression	Lcy11g012900
Synteny	Lcy11g012900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCACCGTCGATTCCGTACCTAAGGAAGCCACCGACATAACAAAAGGTGTCAAAAGAGAAAGAGATGACGAAGGATCAGGGAAGAAGCGAAGTTCAACAAAAAAACCCAAAGTCAAAGACAAAAAAACGAAAACTAACGAGGATAAGTCAGATCCGAGTGAGGTAGGTACTGTTTGTTACCCCCCCCCCCCATTTTAGATATAACGTAAAATGTACATTCTGATTGTCGTTTTTCTATCAATGGTCAAAAAGGACAAGGCTAGAACGACTAGCACCAAAAAGAAAAGTACACCGAAGAAGACAAAGGATAAACCAAAGAAGACCAAGGTCGTGGAGGTAATACTCAAAAAAACCCTCAAAAAGCTCTATATTTACTGTCTGGTTTATGTGAAACATGATGTATTTACCCCGTGGTTTGTGTGAAACGGGCTGAAATTGATGCAAGCGAGGACACATCCAAGCATGACACGAACGGAGACAATTCCATTACTGATGATAACTCTTCAAGCGATAGTGAAGAAGAAGGACAAAGTAAAAAGAAGCCAAAAGTTGATAAAAAGGTAAAAAAGTTCACCCCTCCCCCCTTGTGACATGATATTATAATTTGATAGTTTATTATTGGGGAAACCCACCAGGTTGCAAGGAAAAACAAGAGAAAAGACAAACGGACGAAGAAGGATATAGTTGATGAAGTTGACCCCATTAGAGCGGTATGTACTGATATATACATATGTTATTTGCAAGTTCATGATTTGCTTGTGTGTACTGAGTTAAAATTGAGATGTATGAATCTGGATATGAATTTGTACTGTGAATCAAAGGGTGAAAAAGTGCTGCAATACCTGTTGAATGACACTTTGATATCTATCTATAGTATTATATACATGGGTATTACACATGCATGGTTGTGTATATGTATATGTACTAATATATACATATATTATTTACACCTTCTATGTCCCTGCTTGTGTGTAATGGCGTCTAAAACTGATATGTATGTATCTGGATATGCATGTATCGAATGGTGAAAGTGTACTGGACTCTGCTGCCCAAACTTGAAATATATACATCTGGATGTAATCCCTCCTGTATCGTATAAATCTAGAATGCCTATTAAAACAACACTCTGTTTTTTGTCTGTACTATTATATACATTCATAATACCCCTCCCCCCCAACAATGTATGTATGGACGTCTATCCCATAATGTTTATATATAGGAAATATGCTTACCACATGCCTGTTGTGAGTTATGTATGCGTTGCAGTGTGCTGCAATGCCTGTTGAATCACACTCTGATATCTGTCTATAGTATTATATACATGCGTACTACACATGCCTGCTGTGTATATGTATATGAACTCCCCCCCCCCCGTATATGAGTTATGTATGCTTTGCAGTTTATATACATGGTTTTTTTTTGGATCGATACATCTGTTGCCTGTCTGTATGTACTACTACATACGTCTCTTACTGTTGTCCTTTTGTAACATGAATATTGATACAGGACGATAATTACTTCATGTCGCTGTCAAAACGCAGCAAGACCCTCAAAATTAACCTCTACAGCAAGACTGAGATAATGGAAAACATTCGCCAGATATTGGGGGATAAATGTCAAGAAGCTTTTAGAAACACCTGTTCCGATCACCTCCTCGACTTCTCGTTTAAAAAAACATCATCTCAGCTCCTACTACACTTGATCCAACATCAGTGCAAACCCAAACGCGCGTCGGAGCTTTATTTCAAAATTGGAGGAAAAATACTGAAGTTCGGACTACGAGAGTTTGCACTTATTACCGGACTGCATTGTGGTCCGTTGCCACCACTCGATAAAGACAAACTCCAAGAGGCTTCGAGATTCAAGACCGAGTACTTTGATGACCGCGAGGGAGTCAAAAGGAAGACTCTAAACATCGTGTTCAAGACAATAAAACACGACGTTGAGTCGGACCTTGTGAATATGGCACAATTATATTATCTAGAAAGCTTCTTACTCCCATGGCAGGAGAAGGTCCACATCGAGGAAGATCACCTACTGATGGTCGAGGACTAGGAGTTGTTCAACTCCTACCCTTGGGGACGCGTCGCCTTCACGTTGTTGGCAAACTACATGCAAAAGGCATGGCTTAGTCGGGGCAAATGTGGGATCAGAATGAGGGGATTTGTGTATGTCATTCTAGCATGGGCATACGAAGTAATCCTCGCCCTTTGCGCCCCCCCCCCCCCCCCCCCGACCAATTATGCACGGAGGATAAAAAATACAGTGCCCCGCCTGATTAACTGGGAGTCCGACACCCAACCCGAATGGAGGGAGCTGCACGCAAAAATCTTCCAATCCCCGTTGGTCAGTACACCACCCCATTGTATTTTAGTATTTGTGAAAAAATTAAATTTTTGTGTATATAACCTTATTTACATTTCACGCAGTTGGAGGTCGTGTCATTGGAACCAACCAAAGTGGAAATGCGCATGTCGTACTTCCAGCCCTTCGTGGATGA

mRNA sequence

ATGAGCACCGTCGATTCCGTACCTAAGGAAGCCACCGACATAACAAAAGGTGTCAAAAGAGAAAGAGATGACGAAGGATCAGGGAAGAAGCGAAGTTCAACAAAAAAACCCAAAGTCAAAGACAAAAAAACGAAAACTAACGAGGATAAGTCAGATCCGAGTGAGGACAAGGCTAGAACGACTAGCACCAAAAAGAAAAGTACACCGAAGAAGACAAAGGATAAACCAAAGAAGACCAAGGTCGTGGAGGTTGCAAGGAAAAACAAGAGAAAAGACAAACGGACGAAGAAGGATATAGTTGATGAAGTTGACCCCATTAGAGCGGACGATAATTACTTCATGTCGCTGTCAAAACGCAGCAAGACCCTCAAAATTAACCTCTACAGCAAGACTGAGATAATGGAAAACATTCGCCAGATATTGGGGGATAAATGTCAAGAAGCTTTTAGAAACACCTTTGGAGGTCGTGTCATTGGAACCAACCAAAGTGGAAATGCGCATGTCGTACTTCCAGCCCTTCGTGGATGA

Coding sequence (CDS)

ATGAGCACCGTCGATTCCGTACCTAAGGAAGCCACCGACATAACAAAAGGTGTCAAAAGAGAAAGAGATGACGAAGGATCAGGGAAGAAGCGAAGTTCAACAAAAAAACCCAAAGTCAAAGACAAAAAAACGAAAACTAACGAGGATAAGTCAGATCCGAGTGAGGACAAGGCTAGAACGACTAGCACCAAAAAGAAAAGTACACCGAAGAAGACAAAGGATAAACCAAAGAAGACCAAGGTCGTGGAGGTTGCAAGGAAAAACAAGAGAAAAGACAAACGGACGAAGAAGGATATAGTTGATGAAGTTGACCCCATTAGAGCGGACGATAATTACTTCATGTCGCTGTCAAAACGCAGCAAGACCCTCAAAATTAACCTCTACAGCAAGACTGAGATAATGGAAAACATTCGCCAGATATTGGGGGATAAATGTCAAGAAGCTTTTAGAAACACCTTTGGAGGTCGTGTCATTGGAACCAACCAAAGTGGAAATGCGCATGTCGTACTTCCAGCCCTTCGTGGATGA

Protein sequence

MSTVDSVPKEATDITKGVKRERDDEGSGKKRSSTKKPKVKDKKTKTNEDKSDPSEDKARTTSTKKKSTPKKTKDKPKKTKVVEVARKNKRKDKRTKKDIVDEVDPIRADDNYFMSLSKRSKTLKINLYSKTEIMENIRQILGDKCQEAFRNTFGGRVIGTNQSGNAHVVLPALRG

Homology

The following BLAST results are available for this feature:

BLAST of Lcy11g012900 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy11g012900 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy11g012900 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy11g012900 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..98
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..98

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g012900.1	Lcy11g012900.1	mRNA