Lcy11g012490 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g012490
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	RING-type domain-containing protein
Location	Chr11: 17777020 .. 17781646 (-)
RNA-Seq Expression	Lcy11g012490
Synteny	Lcy11g012490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAGAAGAAATATAGTTGCCCCATGTGCAAGCAGACCTATGTGGCAAAAGATGTTGCATGGCTGTATTTTCAGTTTGTGGGAGATGCAAAATGATTCGATGCTTTCTAAGAAACCGACCGATTGGGTTGAGAGAGATCCGGAGTTGTTGAGAAGTGAGGTGAAGAGGCTGGAGATGAAGAAGGTCTCGGTGCTTAATTCAACATTGGAGCAACGAGGGAAGGATCTCAAAGAGCTCAATAAGGAGGTATTTCTGCTTTGTTGTTAGGAAAACTAGGACTAATAGATGTTGATTATTAAGGGCCCGTTTGATAACCATTTCAGTTTTTGGTTTTTGGTTTTTGGTTTCCTGTTTTTTAAAAACAAAAACCACATATGTTTGATAACTGGTTTTTGTTTTCTGTTTTTTAAAAATTAGAAAGATGAAAAAATATTTTAGAGAGAGAAAAATGTGTAAAGACGTTGAAACAAAAATTTAGAGACAAATATAAATGTTTTCAAGAGATTTTTTTTTTTTTTTTAAAGACGAGAGAAAAGTTAAACATAGAAAAATTAGAGAGATGAAAGAAAATGTTTAGAGAAAGAATATTAGTTAGACTCGAGAAAAGATATTAGTTAGAGAAAAAATAGAAAACAAATTAGAGTAAAAGCCATAAATTTTAGATTAAAAAAATTAAATAAAAAAAAATTTAGAGAGATAGTAAAGTTAAGAGTAAAAGATATACTAAAGAACTAACGATAAATTAGAAAAATAAAGAAAAGTTGTAGCGATAGACAAATTTTGTGACTTTTTTTTTTCAAAAGAAAAATTAGAACATGTTTATTGAGGAGAGAAAAGGTATTGACAAGTTTTTAGAAATAGACAAGTTATAGAGAAAAAAAAGTTTTGAGAGAGAAAATTTTAGAGAGAGAAAAAAAATAGAGAAAGAAATTTGTTGGAGAGAGAGGTAAAAGAGGAGAAAAGTAGGCATTAGAAGAAAAATGAGTTTTTGAAAAACAGAAATCTGTTTTTAAAAACTACTTTTTTTGGTTTTTAAAATTTACTTATAATTCCAAAAACGTTTTTAAAAAACAGAAAACAGAAATGGTTATCAAACACCCCTGTTTTTTTAAAATGAAAAACAAAAACAGAAAACAGAAAACGAAATGGTTATCAAACGGGCCCTAAATTTTTGGGTGTTTGATTACAGATCTTTCTAAATGTAGTGAATTTAGAGATGTTCAAAGTCTCTGAAAAGGCTAAAGTATTCAGTAGTCTTTGGCCTCGATTTTTTTTCATACGATAGAATTTGTGCTAATTATCATTCTGCTGGGAAGATATTGATTGTCTATTTATCCCTTTTGCTTATAAATCTTGGGTTTCTTTTGGCTCTTTATTTGAGTGGTGGTCTTGAGAGTGAAACCATCTGTGCTTTGCTGGAATGATTTTACCACTCTATGTTGGAATATTTGGTAGGAAAATAATGCTAGGACTTTTTAAGATAGTTACAAAGAATGAGGATCCTTTTTTAGTTTAATATAACTTACAGCCTTCTATTGGAGCTTGTTTAAAAGAAGTTTTTGTACTATTCGTCTTATATCATAAGATAGCATTTGGGGAGTCTTTGGTAAATCTTAGTTGCTTTTTGGGGCTTAGGTGATGTCACATGCCAATCTCCTTTCCTTTCAATTAATCTTTCCTATGAAAATTGACAATGTACTTGGTTGTTCTTCAAATGAATTTTTTCCTTCTTTCTTTTTTGTTGGTTTGTTGTGTGTGCTTTTTTTATTTGTTGGTTTTCTGTGCTATTAGGATCCATATGTGGTTCGAAAATGATGATTGTTTTCTTGTGGGTAGTGAGCATAGAGGCTTGTTTTCACTGGATCAGTAGAATCTAACTATGGAACTGGTAGTTTCTTAGTTTCCTAAAGTTCTTAACAACTTGAGACGTTCTGTAATTATTTTCTTTGAAAATCAAATTTTCAATTCTTCAGTTCCTAGATAAAGCTTATAAAAAAAATCTTCAGCTCCTAGATAAAGCTTCATGTGCTATAATTTGTTCATGTTAACTGTTGATGAGTGTATGTATACACGTGGTACTTAATCACATTGTCTTTATCTTTGCCAGGATGAAGTGAAGAAGGAAGTAGGCTTGAGGAATGAAGCCGCTAAACAAAAAACATTAATGTCCCAATTGCTCCACCTAAAATCTGAGGTCAACAGTTTATTCTAAGCTCAGATTTTTTTTTCTTGCAATGTTTTGGTTCCTTTATGGACTTATTATGTTATACATGATGATGTTTGGTTGCACGTGCAGGAACTCGATAAATCAACTATTGACTGCAAAAGGTTGCATGTAAGAAGTATGGCTTTGGCTAAAGAGATTGCAGCTTTCAAGTTGTAAGTGCAATTTTGTTGTTAAGGAAAATGAGGAGGAAAAGTTGTATACCCTTTGCCATTTGTATCGTAGGGTATCTGAACTGGATCTTGATGAAGAAGGGGTTCTAAAGCTTTCTTCATTGGGGAGTGGAGCAGATAATAAAGATACAATTGACATTCTAAGGAAATCCTTAGTTCTGTGTAATAGGTCAGTTATCTCAATGTCACCTATGGAAATCTGAAATAATCTTAGAATGTAACTTTTTGCAATTTGGTTGTGTGATTTGACCTGAAATTGAAACTTTGAGCAACTTTACGAATCAAAAGATGTGTTGTTCAAGTATATACAAATAATTTTTGAATATTAGACCAATAATGATAATATGTATGTATTTCCTTTGGCTAATTTATCGTTTTAAGTATTCTTCGGAAAAGTCTTTAACTTTTCCATAGGAGTTATAAAGAACTGATGACAAAGTGCAATCTTCTTGGAAGGGGAGAAACTCGCTATTGTAAGAAACTTGAAAGGGCAAAAGAGAAAATAAATAAACTGAAGGTGAGCTCATAACAAATAAAATCTCATTTGATGCATTTGATCTAATTTAATGTCTAATAATGATCATTATCAGGTAAGAGGCTAAGAACTAGAGAAAGCCATTAAAGATAAAGATAATGAAGTTTTGAGAGGCTTCAAGATTTCAACCATTCAAGGGGTTCAGGGTAGTGTGTATTGTAAATGTAACATGATATTAGCCAAAAATAAACCTGCTGCTTCATCAGATGCTTCAGGTTCAACTGCAAGCCAGATCAACGAACCATTATCTTCAAGAAAAGGATTTTTTTTTTAATTTTCAGGTGATGTTTCTACAAGCGATTCAACCTTGGTAGATATAGCTAAGGACATGAACTCCTCAATGGATAAGAAAACTTTAGAATTTCCTCAAGTTGAGCATGCTAATTTAAATCCTAATTTAGGACGCCAAATAAGTGGATCTCTTTCATTTTCATTTTTCCTTGTTGCATTATACTTCTAAAATACAGTCTCACACCAGAAGCACTCCTCATACTGAAGGTATTTTTCCTTAAATCTATTACCATCTCCTTGTATTGTTTCTCTCACCCTTTCATTCAAATACGAAGAAACAACTAGTAGGAAACAATGTATATCTTGAAAATATCATGAGATAACGTGATTTTAGGATACAATCACCAATAAAGTACTAAATCTCTCAAAGCTTCCTTATTTAATTCCATTAATCTTCATCTTGTCTGTCTGAAGGTGAAGTATCTAATGTCTTTATAATTTCCATTTTGCTATAAAGGGACAGAAGTTAGGTTTGACTTTGAGATCTTTCGCATAAAGTGGTATATATTTTTAAAGTTTTCTCTTCTCACATTTTCCTTCTATTAAATGTTAAACTCATAGTTATTGACTAACGTGTATGTATTATGTCCTGAGACTATTGAAGAATATACAAATCTAGTTCCTTCAACTTGTTGAAGAAAGTTAATTCCCAGCTTTTTACTATTTAAAATTATCTTTAGTAGGTGTTATTGTAGTATACCATATAGTTGTTCCTAAGTTGGCTATTTAAATGATTATTTAGGAAAATATGCTTATTTATTTTTTCAGTAAACTTTTCATCGAGGACATTATTGTTGGTGGATATTGTGTTGGTTTCTTGAATTCCTCTTGCTCTTGTGGGTTTTGCCTTCTTTATTTTCAACTCCATTTTTTGTTGACTAGTGTAACTAGTTTTGTTGGAAAAACATTCAGCAAAAGAAAGTTGGAGACATTTGTAGGGACCTTCCAAAGTTTCCATTACTAAAATTTTGAGCATGTGAAGTCTTTGGTTTTGCCACCTTCTAATTGGAGTTGTAAGATTGCCAAAGCATTAGTAGCAGCAAAAAATTGTAAGGGTTATCAAACCTCAATTTTTGTTGGGTTAGTGATTGGATGTTCTTTTTAGTTCTTTGTGAAGATTTCCCAGTTAGTATTCTTTTGCTCTTGATAAAGGTTTACATGATTTTCATTATGTATTTTCCCTTTATAGAACATTCATAAAAAATTTTGCTTGCTTTATCAAGAAAAAATAAGGTTTGTGATTCTTGCACCTGTTTGATGCCTTACTATATATAGCTTAATGTTTATGAAGGAGAGCTGAAACTTCCAATGCCTTATTGCTTAATGAAATTTGCTTTCATATAACATGGCAATATTAATGTGTCTTTTATGGCTTTGTGGTTCTAGTTTATTCGACTATGA

mRNA sequence

ATGGGAAGAAGAAATATAGTTGCCCCATGTGCAAGCAGACCTATGTGGCAAAAGATGTTGCATGGCTGTATTTTCAGTTTGTGGGAGATGCAAAATGATTCGATGCTTTCTAAGAAACCGACCGATTGGGTTGAGAGAGATCCGGAGTTGTTGAGAAGTGAGGTGAAGAGGCTGGAGATGAAGAAGGTCTCGGTGCTTAATTCAACATTGGAGCAACGAGGGAAGGATCTCAAAGAGCTCAATAAGGAGGATGAAGTGAAGAAGGAAGTAGGCTTGAGGAATGAAGCCGCTAAACAAAAAACATTAATGTCCCAATTGCTCCACCTAAAATCTGAGGAACTCGATAAATCAACTATTGACTGCAAAAGGTTGCATGTAAGAAGTATGGCTTTGGCTAAAGAGATTGCAGCTTTCAAGTTGGTATCTGAACTGGATCTTGATGAAGAAGGGGTTCTAAAGCTTTCTTCATTGGGGAGTGGAGCAGATAATAAAGATACAATTGACATTCTAAGGAAATCCTTAGTTCTGTGTAATAGGAGTTATAAAGAACTGATGACAAAGTGCAATCTTCTTGGAAGGGGAGAAACTCGCTATTGTAAGAAACTTGAAAGGGCAAAAGAGAAAATAAATAAACTGAAGTTTATTCGACTATGA

Coding sequence (CDS)

ATGGGAAGAAGAAATATAGTTGCCCCATGTGCAAGCAGACCTATGTGGCAAAAGATGTTGCATGGCTGTATTTTCAGTTTGTGGGAGATGCAAAATGATTCGATGCTTTCTAAGAAACCGACCGATTGGGTTGAGAGAGATCCGGAGTTGTTGAGAAGTGAGGTGAAGAGGCTGGAGATGAAGAAGGTCTCGGTGCTTAATTCAACATTGGAGCAACGAGGGAAGGATCTCAAAGAGCTCAATAAGGAGGATGAAGTGAAGAAGGAAGTAGGCTTGAGGAATGAAGCCGCTAAACAAAAAACATTAATGTCCCAATTGCTCCACCTAAAATCTGAGGAACTCGATAAATCAACTATTGACTGCAAAAGGTTGCATGTAAGAAGTATGGCTTTGGCTAAAGAGATTGCAGCTTTCAAGTTGGTATCTGAACTGGATCTTGATGAAGAAGGGGTTCTAAAGCTTTCTTCATTGGGGAGTGGAGCAGATAATAAAGATACAATTGACATTCTAAGGAAATCCTTAGTTCTGTGTAATAGGAGTTATAAAGAACTGATGACAAAGTGCAATCTTCTTGGAAGGGGAGAAACTCGCTATTGTAAGAAACTTGAAAGGGCAAAAGAGAAAATAAATAAACTGAAGTTTATTCGACTATGA

Protein sequence

MGRRNIVAPCASRPMWQKMLHGCIFSLWEMQNDSMLSKKPTDWVERDPELLRSEVKRLEMKKVSVLNSTLEQRGKDLKELNKEDEVKKEVGLRNEAAKQKTLMSQLLHLKSEELDKSTIDCKRLHVRSMALAKEIAAFKLVSELDLDEEGVLKLSSLGSGADNKDTIDILRKSLVLCNRSYKELMTKCNLLGRGETRYCKKLERAKEKINKLKFIRL

Homology

[Close]

BLAST of Lcy11g012490 vs. ExPASy TrEMBL
Match: A0A6J1L0F5 (uncharacterized protein LOC111499239 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499239 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 5.7e-73
Identity = 156/186 (83.87%), Postives = 169/186 (90.86%), Query Frame = 0


Query: 32  NDSMLSKKPTDWVERDPELLRSEVKRLEMKKVSVLNSTLEQRGKDLKELNKE-----DEV 91
           NDSML+KKP DWVE+DPELLRSEV+RLEM KV+VLNSTLE +GKDLKEL +E     DEV
Sbjct: 23  NDSMLAKKPADWVEKDPELLRSEVRRLEM-KVTVLNSTLESQGKDLKELIEELQFCQDEV 82

Query: 92  KKEVGLRNEAAKQKTLMSQLLHLKSEELDKSTIDCKRLHVRSMALAKEIAAFKLVSELDL 151
           KKEVGLRNEA KQKT MSQLL+LKSEEL+KST++CKRLH RSMALAKE+AAFKLVSE+DL
Sbjct: 83  KKEVGLRNEAMKQKTSMSQLLNLKSEELEKSTVECKRLHERSMALAKELAAFKLVSEVDL 142

Query: 152 DEEGVLKLSSLGSGADNKDTIDILRKSLVLCNRSYKELMTKCNLLGRGETRYCKKLERAK 211
           DEE V KLSSLGSGADNKDTIDILRKSLVL NRSYKELM KCNLLGRGE RYCKKLE+AK
Sbjct: 143 DEEEVRKLSSLGSGADNKDTIDILRKSLVLRNRSYKELMAKCNLLGRGEARYCKKLEKAK 202

Query: 212 EKINKL 213
           EKINKL
Sbjct: 203 EKINKL 207

[Close]

BLAST of Lcy11g012490 vs. ExPASy TrEMBL
Match: A0A6J1L583 (uncharacterized protein LOC111499239 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499239 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 5.7e-73
Identity = 156/186 (83.87%), Postives = 169/186 (90.86%), Query Frame = 0


Query: 32  NDSMLSKKPTDWVERDPELLRSEVKRLEMKKVSVLNSTLEQRGKDLKELNKE-----DEV 91
           NDSML+KKP DWVE+DPELLRSEV+RLEM KV+VLNSTLE +GKDLKEL +E     DEV
Sbjct: 81  NDSMLAKKPADWVEKDPELLRSEVRRLEM-KVTVLNSTLESQGKDLKELIEELQFCQDEV 140

Query: 92  KKEVGLRNEAAKQKTLMSQLLHLKSEELDKSTIDCKRLHVRSMALAKEIAAFKLVSELDL 151
           KKEVGLRNEA KQKT MSQLL+LKSEEL+KST++CKRLH RSMALAKE+AAFKLVSE+DL
Sbjct: 141 KKEVGLRNEAMKQKTSMSQLLNLKSEELEKSTVECKRLHERSMALAKELAAFKLVSEVDL 200

Query: 152 DEEGVLKLSSLGSGADNKDTIDILRKSLVLCNRSYKELMTKCNLLGRGETRYCKKLERAK 211
           DEE V KLSSLGSGADNKDTIDILRKSLVL NRSYKELM KCNLLGRGE RYCKKLE+AK
Sbjct: 201 DEEEVRKLSSLGSGADNKDTIDILRKSLVLRNRSYKELMAKCNLLGRGEARYCKKLEKAK 260

Query: 212 EKINKL 213
           EKINKL
Sbjct: 261 EKINKL 265

[Close]

BLAST of Lcy11g012490 vs. ExPASy TrEMBL
Match: A0A6J1H2X0 (uncharacterized protein LOC111459984 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111459984 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 9.8e-73
Identity = 156/187 (83.42%), Postives = 170/187 (90.91%), Query Frame = 0


Query: 32  NDSMLSKKPTDWVERDPELLRSEVKRLEMKKVSVLNSTLEQRGKDLKELNKE-----DEV 91
           NDSML+KKP DWVE+DPELLRSEV+RLEM KV+VLNSTLE +GKDLKEL +E     DEV
Sbjct: 23  NDSMLAKKPADWVEKDPELLRSEVRRLEM-KVTVLNSTLETQGKDLKELIEELQFCQDEV 82

Query: 92  KKEVGLRNEAAKQKTLMSQLLHLKSEELDKSTIDCKRLHVRSMALAKEIAAFKLVSELDL 151
           KKEVGLRNEA KQKT MSQLL+LKSEEL+KST++C+RLH RSMALAKE+AAFKLVSE+DL
Sbjct: 83  KKEVGLRNEAMKQKTSMSQLLNLKSEELEKSTVECERLHDRSMALAKELAAFKLVSEVDL 142

Query: 152 DEEGVLKLSSLGSGADNKDTIDILRKSLVLCNRSYKELMTKCNLLGRGETRYCKKLERAK 211
           DEE V KLSSLGSGADNKDTIDILRKSLVL NRSYKELM KCNLLGRGE RYCKKLE+AK
Sbjct: 143 DEEEVRKLSSLGSGADNKDTIDILRKSLVLRNRSYKELMAKCNLLGRGEARYCKKLEKAK 202

Query: 212 EKINKLK 214
           EKINKLK
Sbjct: 203 EKINKLK 208

[Close]

BLAST of Lcy11g012490 vs. ExPASy TrEMBL
Match: A0A6J1H385 (uncharacterized protein LOC111459984 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111459984 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 9.8e-73
Identity = 156/187 (83.42%), Postives = 170/187 (90.91%), Query Frame = 0


Query: 32  NDSMLSKKPTDWVERDPELLRSEVKRLEMKKVSVLNSTLEQRGKDLKELNKE-----DEV 91
           NDSML+KKP DWVE+DPELLRSEV+RLEM KV+VLNSTLE +GKDLKEL +E     DEV
Sbjct: 81  NDSMLAKKPADWVEKDPELLRSEVRRLEM-KVTVLNSTLETQGKDLKELIEELQFCQDEV 140

Query: 92  KKEVGLRNEAAKQKTLMSQLLHLKSEELDKSTIDCKRLHVRSMALAKEIAAFKLVSELDL 151
           KKEVGLRNEA KQKT MSQLL+LKSEEL+KST++C+RLH RSMALAKE+AAFKLVSE+DL
Sbjct: 141 KKEVGLRNEAMKQKTSMSQLLNLKSEELEKSTVECERLHDRSMALAKELAAFKLVSEVDL 200

Query: 152 DEEGVLKLSSLGSGADNKDTIDILRKSLVLCNRSYKELMTKCNLLGRGETRYCKKLERAK 211
           DEE V KLSSLGSGADNKDTIDILRKSLVL NRSYKELM KCNLLGRGE RYCKKLE+AK
Sbjct: 201 DEEEVRKLSSLGSGADNKDTIDILRKSLVLRNRSYKELMAKCNLLGRGEARYCKKLEKAK 260

Query: 212 EKINKLK 214
           EKINKLK
Sbjct: 261 EKINKLK 266

[Close]

BLAST of Lcy11g012490 vs. ExPASy TrEMBL
Match: A0A6J1D0D3 (uncharacterized protein LOC111016223 OS=Momordica charantia OX=3673 GN=LOC111016223 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 9.1e-71
Identity = 153/193 (79.27%), Postives = 169/193 (87.56%), Query Frame = 0


Query: 26  SLWEMQNDSMLSKKPTDWVERDPELLRSEVKRLEMKKVSVLNSTLEQRGKDLKELNKE-- 85
           S+ +  NDS+L++KP DWVERDPE LR EVKRLEM KVSVLNS LE +GKDLK+L++E  
Sbjct: 76  SVGDASNDSVLTQKPRDWVERDPEALRIEVKRLEM-KVSVLNSALEGQGKDLKQLSEELH 135

Query: 86  ---DEVKKEVGLRNEAAKQKTLMSQLLHLKSEELDKSTIDCKRLHVRSMALAKEIAAFKL 145
              DEVKKEVGLRNEA KQK LMSQ+LHLKSEELDKST++CKRLH RSMALAKE+AAFKL
Sbjct: 136 ICQDEVKKEVGLRNEAVKQKALMSQMLHLKSEELDKSTVECKRLHERSMALAKELAAFKL 195

Query: 146 VSELDLDEEGVLKLSSLGSGADNKDTIDILRKSLVLCNRSYKELMTKCNLLGRGETRYCK 205
           V+ELDLDEE VLKLSSLGSGADNKDTIDILRKSLV+ NRSYKELMTKCNLLGRGE   CK
Sbjct: 196 VTELDLDEEEVLKLSSLGSGADNKDTIDILRKSLVMRNRSYKELMTKCNLLGRGEAHSCK 255

Query: 206 KLERAKEKINKLK 214
           KL +AKEKI KLK
Sbjct: 256 KLGKAKEKIIKLK 267

[Close]

BLAST of Lcy11g012490 vs. NCBI nr
Match: KAG7013762.1 (hypothetical protein SDJN02_23929 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 285.0 bits (728), Expect = 5.3e-73
Identity = 157/187 (83.96%), Postives = 170/187 (90.91%), Query Frame = 0


Query: 32  NDSMLSKKPTDWVERDPELLRSEVKRLEMKKVSVLNSTLEQRGKDLKELNKE-----DEV 91
           NDSML+KKP DWVE+DPELLRSEV+RLEM KV+VLNSTLE +GKDLKEL +E     DEV
Sbjct: 81  NDSMLAKKPADWVEKDPELLRSEVRRLEM-KVTVLNSTLESQGKDLKELIEELQFCQDEV 140

Query: 92  KKEVGLRNEAAKQKTLMSQLLHLKSEELDKSTIDCKRLHVRSMALAKEIAAFKLVSELDL 151
           KKEVGLRNEA KQKT MSQLL+LKSEEL+KST++CKRLH RSMALAKE+AAFKLVSE+DL
Sbjct: 141 KKEVGLRNEAMKQKTSMSQLLNLKSEELEKSTVECKRLHDRSMALAKELAAFKLVSEVDL 200

Query: 152 DEEGVLKLSSLGSGADNKDTIDILRKSLVLCNRSYKELMTKCNLLGRGETRYCKKLERAK 211
           DEE V KLSSLGSGADNKDTIDILRKSLVL NRSYKELM KCNLLGRGE RYCKKLE+AK
Sbjct: 201 DEEEVRKLSSLGSGADNKDTIDILRKSLVLRNRSYKELMAKCNLLGRGEARYCKKLEKAK 260

Query: 212 EKINKLK 214
           EKINKLK
Sbjct: 261 EKINKLK 266

[Close]

BLAST of Lcy11g012490 vs. NCBI nr
Match: XP_023006548.1 (uncharacterized protein LOC111499239 isoform X1 [Cucurbita maxima])

HSP 1 Score: 283.9 bits (725), Expect = 1.2e-72
Identity = 156/186 (83.87%), Postives = 169/186 (90.86%), Query Frame = 0


Query: 32  NDSMLSKKPTDWVERDPELLRSEVKRLEMKKVSVLNSTLEQRGKDLKELNKE-----DEV 91
           NDSML+KKP DWVE+DPELLRSEV+RLEM KV+VLNSTLE +GKDLKEL +E     DEV
Sbjct: 81  NDSMLAKKPADWVEKDPELLRSEVRRLEM-KVTVLNSTLESQGKDLKELIEELQFCQDEV 140

Query: 92  KKEVGLRNEAAKQKTLMSQLLHLKSEELDKSTIDCKRLHVRSMALAKEIAAFKLVSELDL 151
           KKEVGLRNEA KQKT MSQLL+LKSEEL+KST++CKRLH RSMALAKE+AAFKLVSE+DL
Sbjct: 141 KKEVGLRNEAMKQKTSMSQLLNLKSEELEKSTVECKRLHERSMALAKELAAFKLVSEVDL 200

Query: 152 DEEGVLKLSSLGSGADNKDTIDILRKSLVLCNRSYKELMTKCNLLGRGETRYCKKLERAK 211
           DEE V KLSSLGSGADNKDTIDILRKSLVL NRSYKELM KCNLLGRGE RYCKKLE+AK
Sbjct: 201 DEEEVRKLSSLGSGADNKDTIDILRKSLVLRNRSYKELMAKCNLLGRGEARYCKKLEKAK 260

Query: 212 EKINKL 213
           EKINKL
Sbjct: 261 EKINKL 265

[Close]

BLAST of Lcy11g012490 vs. NCBI nr
Match: XP_023006549.1 (uncharacterized protein LOC111499239 isoform X2 [Cucurbita maxima] >XP_023006550.1 uncharacterized protein LOC111499239 isoform X2 [Cucurbita maxima])

HSP 1 Score: 283.9 bits (725), Expect = 1.2e-72
Identity = 156/186 (83.87%), Postives = 169/186 (90.86%), Query Frame = 0


Query: 32  NDSMLSKKPTDWVERDPELLRSEVKRLEMKKVSVLNSTLEQRGKDLKELNKE-----DEV 91
           NDSML+KKP DWVE+DPELLRSEV+RLEM KV+VLNSTLE +GKDLKEL +E     DEV
Sbjct: 23  NDSMLAKKPADWVEKDPELLRSEVRRLEM-KVTVLNSTLESQGKDLKELIEELQFCQDEV 82

Query: 92  KKEVGLRNEAAKQKTLMSQLLHLKSEELDKSTIDCKRLHVRSMALAKEIAAFKLVSELDL 151
           KKEVGLRNEA KQKT MSQLL+LKSEEL+KST++CKRLH RSMALAKE+AAFKLVSE+DL
Sbjct: 83  KKEVGLRNEAMKQKTSMSQLLNLKSEELEKSTVECKRLHERSMALAKELAAFKLVSEVDL 142

Query: 152 DEEGVLKLSSLGSGADNKDTIDILRKSLVLCNRSYKELMTKCNLLGRGETRYCKKLERAK 211
           DEE V KLSSLGSGADNKDTIDILRKSLVL NRSYKELM KCNLLGRGE RYCKKLE+AK
Sbjct: 143 DEEEVRKLSSLGSGADNKDTIDILRKSLVLRNRSYKELMAKCNLLGRGEARYCKKLEKAK 202

Query: 212 EKINKL 213
           EKINKL
Sbjct: 203 EKINKL 207

[Close]

BLAST of Lcy11g012490 vs. NCBI nr
Match: XP_022958832.1 (uncharacterized protein LOC111459984 isoform X2 [Cucurbita moschata] >XP_022958833.1 uncharacterized protein LOC111459984 isoform X2 [Cucurbita moschata])

HSP 1 Score: 283.1 bits (723), Expect = 2.0e-72
Identity = 156/187 (83.42%), Postives = 170/187 (90.91%), Query Frame = 0


Query: 32  NDSMLSKKPTDWVERDPELLRSEVKRLEMKKVSVLNSTLEQRGKDLKELNKE-----DEV 91
           NDSML+KKP DWVE+DPELLRSEV+RLEM KV+VLNSTLE +GKDLKEL +E     DEV
Sbjct: 23  NDSMLAKKPADWVEKDPELLRSEVRRLEM-KVTVLNSTLETQGKDLKELIEELQFCQDEV 82

Query: 92  KKEVGLRNEAAKQKTLMSQLLHLKSEELDKSTIDCKRLHVRSMALAKEIAAFKLVSELDL 151
           KKEVGLRNEA KQKT MSQLL+LKSEEL+KST++C+RLH RSMALAKE+AAFKLVSE+DL
Sbjct: 83  KKEVGLRNEAMKQKTSMSQLLNLKSEELEKSTVECERLHDRSMALAKELAAFKLVSEVDL 142

Query: 152 DEEGVLKLSSLGSGADNKDTIDILRKSLVLCNRSYKELMTKCNLLGRGETRYCKKLERAK 211
           DEE V KLSSLGSGADNKDTIDILRKSLVL NRSYKELM KCNLLGRGE RYCKKLE+AK
Sbjct: 143 DEEEVRKLSSLGSGADNKDTIDILRKSLVLRNRSYKELMAKCNLLGRGEARYCKKLEKAK 202

Query: 212 EKINKLK 214
           EKINKLK
Sbjct: 203 EKINKLK 208

[Close]

BLAST of Lcy11g012490 vs. NCBI nr
Match: XP_022958831.1 (uncharacterized protein LOC111459984 isoform X1 [Cucurbita moschata])

HSP 1 Score: 283.1 bits (723), Expect = 2.0e-72
Identity = 156/187 (83.42%), Postives = 170/187 (90.91%), Query Frame = 0


Query: 32  NDSMLSKKPTDWVERDPELLRSEVKRLEMKKVSVLNSTLEQRGKDLKELNKE-----DEV 91
           NDSML+KKP DWVE+DPELLRSEV+RLEM KV+VLNSTLE +GKDLKEL +E     DEV
Sbjct: 81  NDSMLAKKPADWVEKDPELLRSEVRRLEM-KVTVLNSTLETQGKDLKELIEELQFCQDEV 140

Query: 92  KKEVGLRNEAAKQKTLMSQLLHLKSEELDKSTIDCKRLHVRSMALAKEIAAFKLVSELDL 151
           KKEVGLRNEA KQKT MSQLL+LKSEEL+KST++C+RLH RSMALAKE+AAFKLVSE+DL
Sbjct: 141 KKEVGLRNEAMKQKTSMSQLLNLKSEELEKSTVECERLHDRSMALAKELAAFKLVSEVDL 200

Query: 152 DEEGVLKLSSLGSGADNKDTIDILRKSLVLCNRSYKELMTKCNLLGRGETRYCKKLERAK 211
           DEE V KLSSLGSGADNKDTIDILRKSLVL NRSYKELM KCNLLGRGE RYCKKLE+AK
Sbjct: 201 DEEEVRKLSSLGSGADNKDTIDILRKSLVLRNRSYKELMAKCNLLGRGEARYCKKLEKAK 260

Query: 212 EKINKLK 214
           EKINKLK
Sbjct: 261 EKINKLK 266

[Close]

BLAST of Lcy11g012490 vs. TAIR 10
Match: AT4G01270.1 (RING/U-box superfamily protein )

HSP 1 Score: 144.1 bits (362), Expect = 1.4e-34
Identity = 95/188 (50.53%), Postives = 125/188 (66.49%), Query Frame = 0


Query: 31  QNDSMLSKKPTDWVERDPELLRSEVKRLEMKKVSVLNSTLEQRGKDLKELNKE-----DE 90
           Q DS+ S K    +E DP LLR EVKRLE  KV  L S LE + K+  E++ +     ++
Sbjct: 79  QTDSIASDKVVG-IEEDPVLLRGEVKRLE-GKVQNLTSALEAKKKENVEVSDKLHQCNEQ 138

Query: 91  VKKEVGLRNEAAKQKTLMSQLLHLKSEELDKSTIDCKRLHVRSMALAKEIAAFKLVSELD 150
           +K++   R EA ++ +    LL LKSEE  +    C +L  R++ALAKE+A+ KLVS+L 
Sbjct: 139 LKEDKVKRWEALQEISTTQHLLKLKSEECIQLNSQCVKLQERTVALAKELASLKLVSDLS 198

Query: 151 LDEEGVLKLSSLGSGADNKDTIDILRKSLVLCNRSYKELMTKCNLLGRGETRYCKKLERA 210
           L+E+ VLKL+ LG+ A  KDTID L KSLV+ NRSYKEL+ KCN LGRGE R  +KLE+A
Sbjct: 199 LEEDDVLKLALLGNNAKTKDTIDTLVKSLVIRNRSYKELLAKCNQLGRGEARSSEKLEKA 258

Query: 211 KEKINKLK 214
            EKI KLK
Sbjct: 259 LEKIEKLK 264

[Close]

BLAST of Lcy11g012490 vs. TAIR 10
Match: AT4G01245.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G01270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 47.4 bits (111), Expect = 1.7e-05
Identity = 23/34 (67.65%), Postives = 27/34 (79.41%), Query Frame = 0


Query: 180 SYKELMTKCNLLGRGETRYCKKLERAKEKINKLK 214
           SYKEL+ KCN LGRGE +  +KLE+A EKI KLK
Sbjct: 34  SYKELLAKCNQLGRGEAQSSEKLEKALEKIEKLK 67

The following BLAST results are available for this feature:

BLAST of Lcy11g012490 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy11g012490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1L0F5	5.7e-73	83.87	uncharacterized protein LOC111499239 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1L583	5.7e-73	83.87	uncharacterized protein LOC111499239 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1H2X0	9.8e-73	83.42	uncharacterized protein LOC111459984 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1H385	9.8e-73	83.42	uncharacterized protein LOC111459984 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1D0D3	9.1e-71	79.27	uncharacterized protein LOC111016223 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]

BLAST of Lcy11g012490 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7013762.1	5.3e-73	83.96	hypothetical protein SDJN02_23929 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023006548.1	1.2e-72	83.87	uncharacterized protein LOC111499239 isoform X1 [Cucurbita maxima]	[more]
XP_023006549.1	1.2e-72	83.87	uncharacterized protein LOC111499239 isoform X2 [Cucurbita maxima] >XP_023006550...	[more]
XP_022958832.1	2.0e-72	83.42	uncharacterized protein LOC111459984 isoform X2 [Cucurbita moschata] >XP_0229588...	[more]
XP_022958831.1	2.0e-72	83.42	uncharacterized protein LOC111459984 isoform X1 [Cucurbita moschata]	[more]

BLAST of Lcy11g012490 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G01270.1	1.4e-34	50.53	RING/U-box superfamily protein	[more]
AT4G01245.1	1.7e-05	67.65	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR47344	RING ZINC FINGER PROTEIN-RELATED	coord: 28..213

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g012490.1	Lcy11g012490.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008270	zinc ion binding