Lcy11g012130 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g012130
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	60S ribosomal protein L11
Location	Chr11: 15391269 .. 15393633 (+)
RNA-Seq Expression	Lcy11g012130
Synteny	Lcy11g012130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGAAGATGTTTGCTGGAAGTTTGAAGAGTCAATATCAAACTTACAACTCATATCAATGTAAGCAAGATAGAAACATCTTTTATGTTTCAAGTTTTGGAATCATTTTCTTTATGAATTTTGCTACTTTAAGATTACCAAAGGAGTGGGATGGATCCAATACAAGAGACGACTTGTGAATTCTCAATTGTGAATGAGAAACTCTTTTTGGCCACTTTAAGGTCAGGAGGTTGTACATAATTTTTAGAGGTAAAAAACATGAATTTAAAGAAAGAAAACAAAGAAATGCTTGTAGACAGAAAATAATATGGATAAAAATGCAATGTTGTGTTGTGTATAGATAAAATCCTCTGAATATGGTCGAGATTGAATTGGACTCCAATTCATAATTGTATATCTTTTTGTGTTGGCTTAAGAAAATAATAGGTCATTTGAGATAATGGTTGAATGAATTTATCATTGAACTGAGGAAGGTGAACACTCCCTAAACTCTTCTCTTATATTTACAATAAAGTTTTATTTGTTTTGTTAATCGTATACTTAGATGTTTTTAATTATTCTAATAATTTAGATTTAACTATGGTGTTTATTGTTAAGCAGATTGACTGGGATGTACACACAATACTATCTTTTTTTTTTAAAGAGAAAAAATTCTTGTTATGTTACATTTCCATTGAAGTTAGACTAAAATACAACAAAAATTCTCACGTGTGGGAATTTAGCAAATTGAACATTCTTGCCGCAACCCAACAAAACTCAAACTAAGTGTCATTTGGCTGACCTAAAATAGAATGGTGTTATATGTTGTTGGATTAGATTTCTTTTTAACTGAGGAACTTGATTTCGTGTTTAGATTATAAGCTTGATGGACATTGGTGCTCGTATCTAACTTGTCTATGATTAAAGTTTTCTATGTGTGTTTAATTGTCATTTTAATAGCAGTCAATCTTTTTTTTATTGTTTTTGTTGGATATAATTATGCTTAGGGGTGAATTAGACTAAGAACCTTAAATGCGAGGATGTTCATATTGTTCACGTGAACTCTTAGACACCTAATAGTAAGAAGCTGTGATATGTAACCTTTGTTAAACATTAATTTTTGAAGTTTAACAAATCTTTGAAAATGTTTTCTTATGAGATTTATTTCAACTCCTTTTTAAAGATTAAGTTTATCAATTTTTACTTTTGGAAAATAATGACTATGCAACTTTTTTCTTCACTCAGTTATATACTTTGATTACATTGTAAGGTTTAGTTCACTGTCATAGGTGAAGCACTTGGTTACTCAACTAAAATTGCATCAAGATATGTAAACATAAATTGAACTAAAGTTATCTTTGAAAGATATTGCTTGATATTGGATTTGATATCTTATGTAATTGTTTTATGTGGCTTTTTTTGTTGTTATTGTGGTCAATAGGGAGATACCCTGTTCTTCCATTTGGAATCAGATGTAATGAGAAGATTGCTTGCTATCTCACCCTTAGAGGTGAGATGGTGATGCAAATTTTGGAATGTGGGTTGAAGGTTAAGGAGTACGAGTTGCATCACAGGAACTTCAGTGACATTGGATGCTTTGGCTTGGTATTCAGGAGCACATCGATTTTGGAATCTAAGTAAGCCTTTGTACTTCTGAATATCCTTCAAGTTATGCTCCAAAAATTTGTATGAAAATCACTAAAATAGAGTGTGATTACCTCCTTTCACTAAGAGCATGTTTGAGGTACACTTTTTGAAATAGTGTTATATTTTGGTTTGAATAACTAGTGTTTAAGAGCTATAATTGGAGGGCTTGTAAAAGTTTAGATTATTGCTTCATCAGGAAAAAAAAGGTTTAGATTATGGTGAGTTTGAAGTCACTATTTGCAAGCCAAATTTTTCTTAAGAACGTCTTTGGGTTGTTCTATAAAACAAGTCATCCATAAAAACAAACTGAAATTGTGTTAGACAAATAGAAAATTGTTGTTTAAAAAAGCTCTCAAATATCTCTAACTGTTTTCTAAACAATTGTTTTAATCTTTTGAAATAAAAATTCAATAAAGTCATATTTGAATTATTGTTTTCGGTGATTCCTTTTTCTTAATAATAACCTTTAAAACATCATTCAATCTTAATTCTTCAAGTGGTTTTGTTATTTTCCCATCAAAAAGACGTTTTGAAAACAAAGTCAATAAATTGTGTAAAAAAATTTCCAAACAAGCCTTGAATATCATCCACATATATTGCTTGAGGTAGATGTGTTTCAAACTTCCAACATGCTTCCTCCCTCCCCTTCCCTTCCGAATTTCTTGAAGAACCATACAAAAGTATCCAAGCTATTGCAAAAAGCTTAATTGGTTCGCTTATACCTGTGAAGGTAAATAA

mRNA sequence

ATGCAGAAGATGTTTGCTGGAAGTTTGAAGAGTCAATATCAAACTTACAACTCATATCAATGGAGATACCCTGTTCTTCCATTTGGAATCAGATGTAATGAGAAGATTGCTTGCTATCTCACCCTTAGAGGTGAGATGGTGATGCAAATTTTGGAATGTGGGTTGAAGGTTAAGGAGTACGAGTTGCATCACAGGAACTTCAGTGACATTGGATGCTTTGGCTTGGTATTCAGGAGCACATCGATTTTGGAATCTAAAACCATACAAAAGTATCCAAGCTATTGCAAAAAGCTTAATTGGTTCGCTTATACCTGTGAAGGTAAATAA

Coding sequence (CDS)

ATGCAGAAGATGTTTGCTGGAAGTTTGAAGAGTCAATATCAAACTTACAACTCATATCAATGGAGATACCCTGTTCTTCCATTTGGAATCAGATGTAATGAGAAGATTGCTTGCTATCTCACCCTTAGAGGTGAGATGGTGATGCAAATTTTGGAATGTGGGTTGAAGGTTAAGGAGTACGAGTTGCATCACAGGAACTTCAGTGACATTGGATGCTTTGGCTTGGTATTCAGGAGCACATCGATTTTGGAATCTAAAACCATACAAAAGTATCCAAGCTATTGCAAAAAGCTTAATTGGTTCGCTTATACCTGTGAAGGTAAATAA

Protein sequence

MQKMFAGSLKSQYQTYNSYQWRYPVLPFGIRCNEKIACYLTLRGEMVMQILECGLKVKEYELHHRNFSDIGCFGLVFRSTSILESKTIQKYPSYCKKLNWFAYTCEGK

Homology

[Close]

BLAST of Lcy11g012130 vs. ExPASy Swiss-Prot
Match: P42795 (60S ribosomal protein L11-1 OS=Arabidopsis thaliana OX=3702 GN=RPL11A PE=2 SV=2)

HSP 1 Score: 86.7 bits (213), Expect = 1.8e-16
Identity = 40/53 (75.47%), Postives = 43/53 (81.13%), Query Frame = 0


Query: 22  RYPVLPFGIRCNEKIACYLTLRGEMVMQILECGLKVKEYELHHRNFSDIGCFG 75
           RY V  FGIR NEKIACY+T+RGE  MQ+LE GLKVKEYEL  RNFSD GCFG
Sbjct: 53  RYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFG 105

[Close]

BLAST of Lcy11g012130 vs. ExPASy Swiss-Prot
Match: P42794 (60S ribosomal protein L11-2 OS=Arabidopsis thaliana OX=3702 GN=RPL11B PE=2 SV=2)

HSP 1 Score: 86.7 bits (213), Expect = 1.8e-16
Identity = 40/53 (75.47%), Postives = 43/53 (81.13%), Query Frame = 0


Query: 22  RYPVLPFGIRCNEKIACYLTLRGEMVMQILECGLKVKEYELHHRNFSDIGCFG 75
           RY V  FGIR NEKIACY+T+RGE  MQ+LE GLKVKEYEL  RNFSD GCFG
Sbjct: 53  RYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFG 105

[Close]

BLAST of Lcy11g012130 vs. ExPASy Swiss-Prot
Match: P46287 (60S ribosomal protein L11 OS=Medicago sativa OX=3879 GN=RPL11 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 4.0e-16
Identity = 39/53 (73.58%), Postives = 43/53 (81.13%), Query Frame = 0


Query: 22  RYPVLPFGIRCNEKIACYLTLRGEMVMQILECGLKVKEYELHHRNFSDIGCFG 75
           RY V  FGIR NEKIACY+T+RG+  MQ+LE GLKVKEYEL  RNFSD GCFG
Sbjct: 53  RYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFG 105

[Close]

BLAST of Lcy11g012130 vs. ExPASy Swiss-Prot
Match: A2YDY2 (60S ribosomal protein L11 OS=Oryza sativa subsp. indica OX=39946 GN=RPL11 PE=2 SV=2)

HSP 1 Score: 85.1 bits (209), Expect = 5.3e-16
Identity = 39/53 (73.58%), Postives = 43/53 (81.13%), Query Frame = 0


Query: 22  RYPVLPFGIRCNEKIACYLTLRGEMVMQILECGLKVKEYELHHRNFSDIGCFG 75
           RY V  FGIR NEKIACY+T+RGE  MQ+LE GLKVKEYEL  RNFS+ GCFG
Sbjct: 53  RYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSETGCFG 105

[Close]

BLAST of Lcy11g012130 vs. ExPASy Swiss-Prot
Match: Q0DK10 (60S ribosomal protein L11 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL11 PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 5.3e-16
Identity = 39/53 (73.58%), Postives = 43/53 (81.13%), Query Frame = 0


Query: 22  RYPVLPFGIRCNEKIACYLTLRGEMVMQILECGLKVKEYELHHRNFSDIGCFG 75
           RY V  FGIR NEKIACY+T+RGE  MQ+LE GLKVKEYEL  RNFS+ GCFG
Sbjct: 53  RYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSETGCFG 105

[Close]

BLAST of Lcy11g012130 vs. ExPASy TrEMBL
Match: I3NMK6 (60S ribosomal protein L11A OS=Hevea brasiliensis OX=3981 GN=RPL11A PE=2 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 6.0e-15
Identity = 40/53 (75.47%), Postives = 44/53 (83.02%), Query Frame = 0


Query: 22 RYPVLPFGIRCNEKIACYLTLRGEMVMQILECGLKVKEYELHHRNFSDIGCFG 75
          RY V  FGIRCNEKIACY+T+RG+  MQ+LE GLKVKEYEL  RNFSD GCFG
Sbjct: 43 RYTVRSFGIRCNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFG 95

[Close]

BLAST of Lcy11g012130 vs. ExPASy TrEMBL
Match: A0A0D2UN47 (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_009G161300 PE=3 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.8e-14
Identity = 48/91 (52.75%), Postives = 54/91 (59.34%), Query Frame = 0


Query: 22  RYPVLPFGIRCNEKIACYLTLRGEMVMQILECGLKVKEYELHHRNFSDIGCFGLVFRSTS 81
           RY V  FGIR NEKIACY+T+RGE  MQ+LE GLKVKEYEL  RNFSD GCFG   +   
Sbjct: 53  RYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHI 112

Query: 82  ILESKT-----IQKYPSYCKKLNWFAYTCEG 108
            L  K      IQ   +    + WF    EG
Sbjct: 113 DLGIKCKSRVGIQHRVTKEDAMKWFQVKYEG 143

[Close]

BLAST of Lcy11g012130 vs. ExPASy TrEMBL
Match: A0A2I0IJY7 (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_035595 PE=3 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.8e-14
Identity = 48/91 (52.75%), Postives = 54/91 (59.34%), Query Frame = 0


Query: 22  RYPVLPFGIRCNEKIACYLTLRGEMVMQILECGLKVKEYELHHRNFSDIGCFGLVFRSTS 81
           RY V  FGIR NEKIACY+T+RGE  MQ+LE GLKVKEYEL  RNFSD GCFG   +   
Sbjct: 53  RYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHI 112

Query: 82  ILESKT-----IQKYPSYCKKLNWFAYTCEG 108
            L  K      IQ   +    + WF    EG
Sbjct: 113 DLGIKCKSRVGIQHRVTKEDAMKWFQVKYEG 143

[Close]

BLAST of Lcy11g012130 vs. ExPASy TrEMBL
Match: A0A3P6GQQ9 (Uncharacterized protein OS=Brassica oleracea OX=3712 GN=BOLC6T37729H PE=3 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 3.9e-14
Identity = 40/57 (70.18%), Postives = 45/57 (78.95%), Query Frame = 0


Query: 22  RYPVLPFGIRCNEKIACYLTLRGEMVMQILECGLKVKEYELHHRNFSDIGCFGLVFR 79
           RY V  FGIR NEKIACY+T+RG+  MQ+LE GLKVKEYEL  RNFSD GCFG V +
Sbjct: 51  RYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFVIQ 107

[Close]

BLAST of Lcy11g012130 vs. ExPASy TrEMBL
Match: Q5I7L2 (Ribosomal protein L11 OS=Triticum aestivum OX=4565 PE=1 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 5.1e-14
Identity = 40/53 (75.47%), Postives = 43/53 (81.13%), Query Frame = 0


Query: 22  RYPVLPFGIRCNEKIACYLTLRGEMVMQILECGLKVKEYELHHRNFSDIGCFG 75
           RY V  FGIR NEKIACY+T+RGE  MQ+LE GLKVKEYEL  RNFSD GCFG
Sbjct: 53  RYTVRSFGIRRNEKIACYVTIRGEKAMQLLESGLKVKEYELLRRNFSDTGCFG 105

[Close]

BLAST of Lcy11g012130 vs. NCBI nr
Match: ADR71243.1 (60S ribosomal protein L11A [Hevea brasiliensis])

HSP 1 Score: 90.1 bits (222), Expect = 1.2e-14
Identity = 40/53 (75.47%), Postives = 44/53 (83.02%), Query Frame = 0


Query: 22 RYPVLPFGIRCNEKIACYLTLRGEMVMQILECGLKVKEYELHHRNFSDIGCFG 75
          RY V  FGIRCNEKIACY+T+RG+  MQ+LE GLKVKEYEL  RNFSD GCFG
Sbjct: 43 RYTVRSFGIRCNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFG 95

[Close]

BLAST of Lcy11g012130 vs. NCBI nr
Match: PKI44010.1 (hypothetical protein CRG98_035595 [Punica granatum])

HSP 1 Score: 88.6 bits (218), Expect = 3.6e-14
Identity = 48/91 (52.75%), Postives = 54/91 (59.34%), Query Frame = 0


Query: 22  RYPVLPFGIRCNEKIACYLTLRGEMVMQILECGLKVKEYELHHRNFSDIGCFGLVFRSTS 81
           RY V  FGIR NEKIACY+T+RGE  MQ+LE GLKVKEYEL  RNFSD GCFG   +   
Sbjct: 53  RYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHI 112

Query: 82  ILESKT-----IQKYPSYCKKLNWFAYTCEG 108
            L  K      IQ   +    + WF    EG
Sbjct: 113 DLGIKCKSRVGIQHRVTKEDAMKWFQVKYEG 143

[Close]

BLAST of Lcy11g012130 vs. NCBI nr
Match: KJB57390.1 (hypothetical protein B456_009G161300 [Gossypium raimondii])

HSP 1 Score: 88.6 bits (218), Expect = 3.6e-14
Identity = 48/91 (52.75%), Postives = 54/91 (59.34%), Query Frame = 0


Query: 22  RYPVLPFGIRCNEKIACYLTLRGEMVMQILECGLKVKEYELHHRNFSDIGCFGLVFRSTS 81
           RY V  FGIR NEKIACY+T+RGE  MQ+LE GLKVKEYEL  RNFSD GCFG   +   
Sbjct: 53  RYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHI 112

Query: 82  ILESKT-----IQKYPSYCKKLNWFAYTCEG 108
            L  K      IQ   +    + WF    EG
Sbjct: 113 DLGIKCKSRVGIQHRVTKEDAMKWFQVKYEG 143

[Close]

BLAST of Lcy11g012130 vs. NCBI nr
Match: VDD62276.1 (unnamed protein product [Brassica oleracea])

HSP 1 Score: 87.4 bits (215), Expect = 8.1e-14
Identity = 40/57 (70.18%), Postives = 45/57 (78.95%), Query Frame = 0


Query: 22  RYPVLPFGIRCNEKIACYLTLRGEMVMQILECGLKVKEYELHHRNFSDIGCFGLVFR 79
           RY V  FGIR NEKIACY+T+RG+  MQ+LE GLKVKEYEL  RNFSD GCFG V +
Sbjct: 51  RYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFVIQ 107

[Close]

BLAST of Lcy11g012130 vs. NCBI nr
Match: CAF2059474.1 (unnamed protein product [Brassica napus])

HSP 1 Score: 87.4 bits (215), Expect = 8.1e-14
Identity = 40/57 (70.18%), Postives = 45/57 (78.95%), Query Frame = 0


Query: 22  RYPVLPFGIRCNEKIACYLTLRGEMVMQILECGLKVKEYELHHRNFSDIGCFGLVFR 79
           RY V  FGIR NEKIACY+T+RG+  MQ+LE GLKVKEYEL  RNFSD GCFG V +
Sbjct: 110 RYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFVIQ 166

[Close]

BLAST of Lcy11g012130 vs. TAIR 10
Match: AT2G42740.1 (ribosomal protein large subunit 16A )

HSP 1 Score: 86.7 bits (213), Expect = 1.3e-17
Identity = 40/53 (75.47%), Postives = 43/53 (81.13%), Query Frame = 0


Query: 22  RYPVLPFGIRCNEKIACYLTLRGEMVMQILECGLKVKEYELHHRNFSDIGCFG 75
           RY V  FGIR NEKIACY+T+RGE  MQ+LE GLKVKEYEL  RNFSD GCFG
Sbjct: 53  RYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFG 105

[Close]

BLAST of Lcy11g012130 vs. TAIR 10
Match: AT3G58700.1 (Ribosomal L5P family protein )

HSP 1 Score: 86.7 bits (213), Expect = 1.3e-17
Identity = 40/53 (75.47%), Postives = 43/53 (81.13%), Query Frame = 0


Query: 22  RYPVLPFGIRCNEKIACYLTLRGEMVMQILECGLKVKEYELHHRNFSDIGCFG 75
           RY V  FGIR NEKIACY+T+RGE  MQ+LE GLKVKEYEL  RNFSD GCFG
Sbjct: 53  RYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFG 105

[Close]

BLAST of Lcy11g012130 vs. TAIR 10
Match: AT4G18730.1 (ribosomal protein L16B )

HSP 1 Score: 86.7 bits (213), Expect = 1.3e-17
Identity = 40/53 (75.47%), Postives = 43/53 (81.13%), Query Frame = 0


Query: 22  RYPVLPFGIRCNEKIACYLTLRGEMVMQILECGLKVKEYELHHRNFSDIGCFG 75
           RY V  FGIR NEKIACY+T+RGE  MQ+LE GLKVKEYEL  RNFSD GCFG
Sbjct: 53  RYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFG 105

[Close]

BLAST of Lcy11g012130 vs. TAIR 10
Match: AT5G45775.1 (Ribosomal L5P family protein )

HSP 1 Score: 86.7 bits (213), Expect = 1.3e-17
Identity = 40/53 (75.47%), Postives = 43/53 (81.13%), Query Frame = 0


Query: 22 RYPVLPFGIRCNEKIACYLTLRGEMVMQILECGLKVKEYELHHRNFSDIGCFG 75
          RY V  FGIR NEKIACY+T+RGE  MQ+LE GLKVKEYEL  RNFSD GCFG
Sbjct: 43 RYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFG 95

[Close]

BLAST of Lcy11g012130 vs. TAIR 10
Match: AT5G45775.2 (Ribosomal L5P family protein )

HSP 1 Score: 86.7 bits (213), Expect = 1.3e-17
Identity = 40/53 (75.47%), Postives = 43/53 (81.13%), Query Frame = 0


Query: 22  RYPVLPFGIRCNEKIACYLTLRGEMVMQILECGLKVKEYELHHRNFSDIGCFG 75
           RY V  FGIR NEKIACY+T+RGE  MQ+LE GLKVKEYEL  RNFSD GCFG
Sbjct: 53  RYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFG 105

The following BLAST results are available for this feature:

BLAST of Lcy11g012130 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42795	1.8e-16	75.47	60S ribosomal protein L11-1 OS=Arabidopsis thaliana OX=3702 GN=RPL11A PE=2 SV=2	[more]
P42794	1.8e-16	75.47	60S ribosomal protein L11-2 OS=Arabidopsis thaliana OX=3702 GN=RPL11B PE=2 SV=2	[more]
P46287	4.0e-16	73.58	60S ribosomal protein L11 OS=Medicago sativa OX=3879 GN=RPL11 PE=2 SV=1	[more]
A2YDY2	5.3e-16	73.58	60S ribosomal protein L11 OS=Oryza sativa subsp. indica OX=39946 GN=RPL11 PE=2 S...	[more]
Q0DK10	5.3e-16	73.58	60S ribosomal protein L11 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL11 PE=2...	[more]

BLAST of Lcy11g012130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
I3NMK6	6.0e-15	75.47	60S ribosomal protein L11A OS=Hevea brasiliensis OX=3981 GN=RPL11A PE=2 SV=1	[more]
A0A0D2UN47	1.8e-14	52.75	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_009G161300 PE=3 ...	[more]
A0A2I0IJY7	1.8e-14	52.75	Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_035595 PE=3 SV=1	[more]
A0A3P6GQQ9	3.9e-14	70.18	Uncharacterized protein OS=Brassica oleracea OX=3712 GN=BOLC6T37729H PE=3 SV=1	[more]
Q5I7L2	5.1e-14	75.47	Ribosomal protein L11 OS=Triticum aestivum OX=4565 PE=1 SV=1	[more]

BLAST of Lcy11g012130 vs. NCBI nr


Match Name	E-value	Identity	Description
ADR71243.1	1.2e-14	75.47	60S ribosomal protein L11A [Hevea brasiliensis]	[more]
PKI44010.1	3.6e-14	52.75	hypothetical protein CRG98_035595 [Punica granatum]	[more]
KJB57390.1	3.6e-14	52.75	hypothetical protein B456_009G161300 [Gossypium raimondii]	[more]
VDD62276.1	8.1e-14	70.18	unnamed protein product [Brassica oleracea]	[more]
CAF2059474.1	8.1e-14	70.18	unnamed protein product [Brassica napus]	[more]

BLAST of Lcy11g012130 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42740.1	1.3e-17	75.47	ribosomal protein large subunit 16A	[more]
AT3G58700.1	1.3e-17	75.47	Ribosomal L5P family protein	[more]
AT4G18730.1	1.3e-17	75.47	ribosomal protein L16B	[more]
AT5G45775.1	1.3e-17	75.47	Ribosomal L5P family protein	[more]
AT5G45775.2	1.3e-17	75.47	Ribosomal L5P family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022803	Ribosomal protein L5 domain superfamily	GENE3D	3.30.1440.10		coord: 9..98 e-value: 4.1E-13 score: 51.3
IPR022803	Ribosomal protein L5 domain superfamily	SUPERFAMILY	55282	RL5-like	coord: 19..84
None	No IPR available	PANTHER	PTHR11994:SF20	SUBFAMILY NOT NAMED	coord: 20..79
IPR002132	Ribosomal protein L5	PANTHER	PTHR11994	60S RIBOSOMAL PROTEIN L11-RELATED	coord: 20..79

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g012130.1	Lcy11g012130.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome