Lcy11g011900 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g011900
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Protein RRP5
Location	Chr11: 14819791 .. 14825966 (-)
RNA-Seq Expression	Lcy11g011900
Synteny	Lcy11g011900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGAGAAGAGGAATCAGTCATGATGTTGTCTCATATGCAAGTATCATTTCTGGTTACTCAAAAGCTCGCAACCTTTATAAGGTACTCAGGCTTTTTGACAATATGAAGCAAATTAAAATAGACCCTAATAGGAAAGTCTACAATGCAGTCATTCATGCTCTTGCCAAAAGTGGGCTTTTGAAAGAAGCTAAAAATCTCATAAAAACGATGGAAGAGAAGGGGATTATTGCAAATGCTGTTACTTATAACTCAATTGTAAAGCCTTTATGCAAGGCCCGAAAATTTGATGAAGCTAGAGCAATTTTTTATGTGCTCTTGCAGCGAAGCCTTTGCCCAACAATCTAGACTTATCATGCCTTCTTGAGATTCCTGAGAATGGAGGAAGAAATATTTGAGCTATTATAGAAGATGAGAACAATGGGGTGCAATCAAACTACTGAAACCTATATAATGTTAATCAGAAAATTTTGTCGATGGCGCCAGCTTGATAATGTTTCCAAAATATGGCAGCTCTTATATTGTCTTAATACATGGTCTCTTCTTGAATGGAAACTTAGAAGATGCATACAAATACTATCTAGAAATGAAGGAAAAAGAGTTACTTCCTGAACCAAAGATAGATGAGGTACTTCAAGCTTGGCTTGCTGGTAAGCCAATGATTCAAGGTCATATGCATGGTTTATCGGAGAACCAATCAAATTGTTTGGGAGAAGCCAAGAACTCCAGATTGTTCCCCAAAAAAATTGATCTGAAAATTGATTTTCACCGACAACCTGAGATTAGAAAGGTTTCAAGAGATTATGGTTTTTCATTCGGGAAGCAGTAGGATTTTGAAGTATATCTTATCACATGAACCTTCAGTACCAAATGGCTTGTTGGGTCTTTCAGGTGCATGACATCAACCGTTCATTTGAGGTTTGGCAATTCAAAATCTTTTCTATTACATAATCAATGCTTTTATGCAATTCAAGTGCTGATGAGGACCGTTGATAGTAGAAGATGTAACTTTTGACTACTTTTTATCTTATTTGGTCTCAACTTTATCTTTGACATTGCCACAAGTTAAATAAAACCAGTCATTATGCTTGTAACAAGGAAGTAATAAACTGCATACTATTCTATTGGTGCACATGTAACATGGAACAACAAGTCATAAAACGAGCTTCTACTTGTACAACAACTAAGAAGAATTCCTAAGGACATGGTTCAAACTAGTCATTATTTGCTGTGCAGTGTGCACTAGGCTCAACTCTAGGTTTTGGAGATTCATCAGAAAACACTTCTGATAAAGTAATAACGTATATAGATTGACAAAGAATACAAATAAAAATGGCAATGCCAAATAAAAATGGCAATGCTCTTCACATGTCGAAGGCATCAAAGCAATTGCAACGAAATTACTTGATGTCATTCTATAACGCCGACAAATTAAGGTAAAACTCGTTTCTTGTTCTAATTTTGAGTATTTTGGGTTAAGTTTCGAGTTTTGGTGATTATATGTTTCTAATTAATGGGTTTCTTAATTGGATTAAGCTGAGGACATTTCTGTAAAAATACTGAAGTGGTGTAGCCCTAAATCCGTATTTTTCTTCCTCCTTCACGTGGACTATCTCCCAGCCGCCATCTGCTTTTTTTTTTTTTTCTCTTCTTCTTCGTTGAACGCCAGGCGCCCGTCTACTCCTTTTTCTTCTTCTTCGTTGAACGCCAGTAGCCCCACTCCTCCAGCACCTCCACCCCTCGTTCTCGGCGCCGGCGTTGGTCACTCTCCGGCGAGTTCGGGACCACGACGGCGGCAGCAGTTGGGCAGTCTGTTTCCAGCGAGTTTTGGCGCGATTTAAAGGTTGTTTTCGTCTCTCTCTTGCCCGATCTCCCCCTTAAACGTTCGCTCCCTCACTTCCAGTCCCTCTTATCTCTGTTTTCGAACTTATTGCAGTGTGGTGGTGGTCGAACAACAACGTTTTCCGACGGCGTTTCCATTAGGCGCGATTTGCAGCTTGTGGGTCTGTTTTTGGGCATTTTTCCAGCGTGTTGTCTATTGGGTAAGCGTTTAGAAGCTTCTTCTTGGTTGATTTTTGAGTTTTATCGATTACCCATTCGTTATTCTTTCCGTTTAGCGAGCATTCTCTTCGTATATGGCATTTTGAGTGTTGGACCTCCAAGTTTCTGCAGTTTTGGAGCGTGTTCGCTTTGGGTAAGTGAATTTAGTCAAGCATTTGGTGGTTTATTTGTATTAAAAGGATACCCATTGATATTGGCTTTTTGTTTCAAGGTGCCAATTGCGTTCGGTTGTCAAATTTCCTATCTTAGGTGGAGTTGTGAGCTTGGACAGCAAACTTTGTTGCTGTTTAGGTGAGTTTTCGAGGGTTAAATCATTCCCGTATTTAGTTGACTCCTTATGCCCTCTTGGTTTAATCTAGTTTATGAGTTAAGATTATTTTTCCCCTTTATGTTTAATTGTTTAGGGACTTGGAAGCTAAGGAGTTTATTTGTTTTGCCAAGCAAACTTAATAGCTAAAGTAAGTAGCTATTGGATTTCAGTTTCAAGCTTAGCCCCATAGCATGTTTGTTGGAATTGATAAATGACTAGTCTGAAGCTTGAATTAGTTTCTTTTGAGAATTGGCATGCTAGCATGAGTTAGTTGTGTGCCTTTAAATTGTCCTTGGATTTTGATGAGCATGATAGTTCGTTTAAGCATGTTGTGGAAAGCTGTGTTCTTTCTAGTTATGGAATATATTTGGTTCTGCTTCGGGATGAATTAGAACTTTTCTTTAAAATTATCTTGGGAGCATGATTAGATCGTATGGCTGATTGCCCTGCATGTCTGATTGGTGGTGGTGGCTCATCGTATTCTGGAGTTATTGTTGAGCCGTACCCATTATGGGAGTGTTTTGTTTGCTCTTTCAGGTGTCAGGAAATTTTTGGATTTTTCTTACGTATGTTGTTATGCTGCCGAATTTTCGGTAGCACAATGGCAAGAGTGAGACTAAGCTTAGTAGAACCTTCTCTGATTAGACTAAGCTTAGTAGGATCCTTCGATACGTTACGCTCGATAGTTGTACGTATGAAAAGGGCAAGGCCTAGAATAGGAGCCTTAAATGTGATTTAGGGTCACATATAGACTTAGCAGATCGTTAAGCCTTATGTCTAGCTAGGTTCGTTTCCTTCCCCATCTTAGGATACTGATGGATACTACCTACAGGCACGAGATCGTGCACCCTATCAGTGACTGATAGAGCTTACTTCTTTGGCACGAGATCGTGCATTCCATCAGGACGGTGTCGAGCTAGGCACAGGATTGTGCGCCAGATGGTATTCGGGCATGCTTCATGCCCAGATTGCTCCACTGTAATTTATACCCATGTTGTAACAAGAAAACCGTTTGTACTTTTGAAGGATAGTCAAGGAAGACACATTGCGAAGTTTTTGGTTGGAGTCTATGAGAGTTAGATGGTGTTTTGGGCAACGAGGTGAAGTTTTGAAGTCTGGAGTTGTGAAGTTTGGGGAGTTATGAAGTCTGTGTTTAGAGTGCAGAGTTGTTAAGTCTAGAGTTATGAAGTCTGTGTTTGGGGAGCAGACTTGTGAAGGTTTGTGTTTATGTTCGTTTTTTTCTAAATTTTTTCTAATTGAATTAATAAAAATGTTTTTCCATCGAGAGCACATACCAAAACTGAAATCCTCTAGGGAGATAAAACTAGCTCTAGGAAATTGATAATGCATATTGAAGTTTGAATAACACGGAATACATTCTTTATTTTGGTGTTGGTTTAATTTCACTTGGGTTAGTGATTCACATTTTTAAATATAAAAATATCTTTAAACTATTTAAAACTTATCTAGTTTGTGGAGTTATTTAAAAAGTTATTGTAAGTTTCCTTGCTTTTTAAATTGTTGGGTGCAAATTGACATGGTTTTGGTTAGACTTTGGTTAAAATTAGATTTTCTTTCCTCCTGTATGTTGCATTTTTCTTTCTAAAAAGTGGTTAGGGGCAATTTCGTTTATTTTAATTAGAAATTTATTAATTAAAATCACGTTTAGTAATTTATTTAATTTATAAACATGTTTAGCCATTTTTCAAATTCCTCCTATTAAATCTAGTCTTGTCCCATTTCCTAGTGCGTCTGAACGTAGGCGGGCTATAAGGCTCAATAGAGCCAGAGGCCCATCTAATTTTCATGGGTCAACAAATAGCCCAAATACATAATTTATGTCGTTCAAATTCAACTACATTAGCTTCTGGCAGACATTTGTTGGGGAGGCTTCTTGCTTTTTTCGTCTTAGGGTTTTTTATGTCAATCTCTGCAGCTCTCATCTCTCGGCGATGGCGAAGAACAGGAATAAGAAGAAGCAAAGTGGGGCTATGTCTATGGACATAACCGAAAATACCTTTAACGAGCTCCCTCAAGGTACATTTGAGTTATCTGAAAAGGGATTAAACAGAATAGTATCAGATAGAATGAAAACTGTATCCTCCAGATGTTTTTACTTGTCGTTCCTTTTTCATTGGTTCTCTTTAAGATGTTTTAGAACTCTTCTTTGTTTTAATATTTGTTTTCTTTTGAGAAGTTTTGAGGTTAAACTAACTTATTTTCCACTTGAATCTATAGCGATGGACGTGTCTGAGTCTGCAGTTCATAAACCAGCTTCTGGCGCTCCCAATCTGTAAGCTTCCACCTGGGAATTATGGTTAATTTTTTAATTTTATGGTTTGGGACATAGTTCCAAGCCAATTCATTGTGCGCTTTTGCTTTTGCTTTTGTTTTTTTTTTTTTTTGTTTTTGTTACAATTCTTGTGTTATCAGTTACCGACTTTAGATTCATTGGCTTTGTTCAATTTGTTGTGTATAAAAAACAGTTAGATTGGGATATCATTATCTCACATGACTAAGCCTTTATCCCAAATTTGTTCATTTTGGTATGAGGCTGACAAAATTAGGGCAAAAATTATAATGGACATAACTTTAGATTAGAGTAAATTGAGCATTGTATGTATTTATGATCTTACCACAAAAGGTGAACTACAAGGATTTTTTTTTTTTCATATTTAGCCATATTACTGTTGATTTTATAAGTGTATTTAGTGGGTCACATATAAGTTTAAGTGCTAGTTACATGGCTAAAAATTGGTGACAACAGTGCGAGAAATATTTCTTGAAGGAGGTAAATGAGGAAAGACTATCAATGCTCTATCTTCATAATCTGTGTTCAACTTTTTTAATTGTGAGAAAAGCATCTTCTAATCGGAAATTCATTGGAATTCATTGGAAATTCATAGCATCTTGATAAATTAGGCCTTTCTTCTCACCAATTGTGTATGTTTTTTACCTGAGTGTAGATTGTTTCTCATTTATTATATTTTGAAATGGCACCATGATAAATATTATACACAATAGAGGAGAAGTACTTAGCTCTTGTATTCCTTCAGGAACATTTCATTTATTACTGTAGTAAGAAGCATATTATGCACCCCTCTTATTCGTTTATAGTCACTTGAACTTATCTATAAAGGCAAAAATAAAACCAGAAAAGAATATCAAGTGGCAACAGTAAATCATAAATGGAAGGAGTGACAAAACTTTCCTATTACTGGAGCCCAATCTTTATCTTTCCTGTATTGGTAACATGTCAAATGGTCCTATTGGTTTCGATTGTATTGAAGACAATGGTTTTTCAAGTGGTCTGATGTTCAACTTTTAATGCCTTAAAGATAAAGATTATGATTGGAACCCTACCCATGTTTTCAAAGAGCTTCACCTCTGAACGCCTGCTATATTGGAATTTGATCTAGAATTTACTGAATCCCAGGCATTGCCTCTGGAAATGGTTGAATAGTAATATTATTCAAATAAGAAATTTTCTGGGGTTTGATTGTCTGTCTCTCAATCTCCCTTTCGAATGCTCGCGAATCCATTGTATAATGTTAGTTGCTTTACTAAATTTGGTTTTTACTTAATTCTAAGCTGCCTTCTTTCTGTTTCACCCACAACTTCTGATCATTACTCTTTGTTTGATAGAAAGTTGAAAAAGAGAAGACCAATGAAGCGGTCAAAGAACGTTAGGAATATAAAAGCCATGGCGAAGGCCATATCCAAGGGTGAGCAGACAACAGAGAAAATATTGAAAAATCAGAGCAAAATTATCAGAATACAATCTGCAAAAACATTGTATGAATGA

mRNA sequence

ATGACGAGAAGAGGAATCAGTCATGATGTTGTCTCATATGCAAGTATCATTTCTGGTTACTCAAAAGCTCGCAACCTTTATAAGGACGGTGTCGAGCTAGGCACAGGATTGTGCGCCAGATGGTATTCGGGCATGCTTCATGCCCAGATTGCTCCACTCTCTCATCTCTCGGCGATGGCGAAGAACAGGAATAAGAAGAAGCAAAGTGGGGCTATGTCTATGGACATAACCGAAAATACCTTTAACGAGCTCCCTCAAGCGATGGACGTGTCTGAGTCTGCAGTTCATAAACCAGCTTCTGGCGCTCCCAATCTAAAGTTGAAAAAGAGAAGACCAATGAAGCGGTCAAAGAACGTTAGGAATATAAAAGCCATGGCGAAGGCCATATCCAAGGGTGAGCAGACAACAGAGAAAATATTGAAAAATCAGAGCAAAATTATCAGAATACAATCTGCAAAAACATTGTATGAATGA

Coding sequence (CDS)

ATGACGAGAAGAGGAATCAGTCATGATGTTGTCTCATATGCAAGTATCATTTCTGGTTACTCAAAAGCTCGCAACCTTTATAAGGACGGTGTCGAGCTAGGCACAGGATTGTGCGCCAGATGGTATTCGGGCATGCTTCATGCCCAGATTGCTCCACTCTCTCATCTCTCGGCGATGGCGAAGAACAGGAATAAGAAGAAGCAAAGTGGGGCTATGTCTATGGACATAACCGAAAATACCTTTAACGAGCTCCCTCAAGCGATGGACGTGTCTGAGTCTGCAGTTCATAAACCAGCTTCTGGCGCTCCCAATCTAAAGTTGAAAAAGAGAAGACCAATGAAGCGGTCAAAGAACGTTAGGAATATAAAAGCCATGGCGAAGGCCATATCCAAGGGTGAGCAGACAACAGAGAAAATATTGAAAAATCAGAGCAAAATTATCAGAATACAATCTGCAAAAACATTGTATGAATGA

Protein sequence

MTRRGISHDVVSYASIISGYSKARNLYKDGVELGTGLCARWYSGMLHAQIAPLSHLSAMAKNRNKKKQSGAMSMDITENTFNELPQAMDVSESAVHKPASGAPNLKLKKRRPMKRSKNVRNIKAMAKAISKGEQTTEKILKNQSKIIRIQSAKTLYE

Homology

[Close]

BLAST of Lcy11g011900 vs. ExPASy TrEMBL
Match: A0A6J1EMH0 (uncharacterized protein LOC111435867 OS=Cucurbita moschata OX=3662 GN=LOC111435867 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 7.9e-32
Identity = 82/99 (82.83%), Postives = 86/99 (86.87%), Query Frame = 0


Query: 59  MAKNRNKKKQSGAMSMDITENTFNELPQAMDVSESAVHKPASGAPNLKLKKRRPMKRSKN 118
           MAKN+NKKK+SGA+SMDITENT  ELPQAMDVSESAVHKPASGA NLKLKK RPMKRSKN
Sbjct: 1   MAKNKNKKKRSGAISMDITENTAQELPQAMDVSESAVHKPASGALNLKLKKGRPMKRSKN 60

Query: 119 VRNIKAMAKAISKGEQTTEKILKNQSKIIRIQSAKTLYE 158
           VR   A AKAISK EQ+ EKILKNQSK  RI SAKTLYE
Sbjct: 61  VRKTMAKAKAISKNEQSAEKILKNQSKTTRIHSAKTLYE 99

[Close]

BLAST of Lcy11g011900 vs. ExPASy TrEMBL
Match: A0A1S3BUB2 (uncharacterized protein LOC103493362 OS=Cucumis melo OX=3656 GN=LOC103493362 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 5.1e-31
Identity = 79/99 (79.80%), Postives = 87/99 (87.88%), Query Frame = 0


Query: 59  MAKNRNKKKQSGAMSMDITENTFNELPQAMDVSESAVHKPASGAPNLKLKKRRPMKRSKN 118
           MAKNRNKKK+ GA+SMD+TEN+ +ELPQAMDVS S VHKPASGA +LKLKK RPMKRSKN
Sbjct: 1   MAKNRNKKKRGGAVSMDVTENSVHELPQAMDVSASTVHKPASGALDLKLKKGRPMKRSKN 60

Query: 119 VRNIKAMAKAISKGEQTTEKILKNQSKIIRIQSAKTLYE 158
           VR  KA+AKAISK EQ+ EKILKNQSK  RIQSAKTLYE
Sbjct: 61  VRKTKAIAKAISKSEQSMEKILKNQSKTTRIQSAKTLYE 99

[Close]

BLAST of Lcy11g011900 vs. ExPASy TrEMBL
Match: A0A6J1J4F8 (uncharacterized protein LOC111483316 OS=Cucurbita maxima OX=3661 GN=LOC111483316 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 4.3e-30
Identity = 81/99 (81.82%), Postives = 86/99 (86.87%), Query Frame = 0


Query: 59  MAKNRNKKKQSGAMSMDITENTFNELPQAMDVSESAVHKPASGAPNLKLKKRRPMKRSKN 118
           MAKN+NKK+ SGA+SMDITENT +ELPQAMDVSESAVHKPASGA NLKLKK RPMKRSKN
Sbjct: 1   MAKNKNKKR-SGAISMDITENTAHELPQAMDVSESAVHKPASGALNLKLKKGRPMKRSKN 60

Query: 119 VRNIKAMAKAISKGEQTTEKILKNQSKIIRIQSAKTLYE 158
           VR   A AKAISK EQ+ EKILKNQSK  RI SAKTLYE
Sbjct: 61  VRKTMAKAKAISKNEQSAEKILKNQSKTTRIHSAKTLYE 98

[Close]

BLAST of Lcy11g011900 vs. ExPASy TrEMBL
Match: A0A6A6MLZ5 (Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_025020 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 7.2e-25
Identity = 69/99 (69.70%), Postives = 82/99 (82.83%), Query Frame = 0


Query: 59  MAKNRNKKKQSGAMSMDITENTFNELPQAMDVSESAVHKPASGAPNLKLKKRRPMKRSKN 118
           MAKNRNKKK++GA+SMDITE T +++PQAMD SES V K ASG PN K+ K RPMKRSKN
Sbjct: 1   MAKNRNKKKKNGAVSMDITEPTVSDVPQAMDTSESVVQKSASGFPNRKV-KGRPMKRSKN 60

Query: 119 VRNIKAMAKAISKGEQTTEKILKNQSKIIRIQSAKTLYE 158
           VR +KA+AKAISK EQ+ EK+LKN+SK  R QSAK LY+
Sbjct: 61  VRKMKAVAKAISKNEQSVEKVLKNESKTARTQSAKLLYD 98

[Close]

BLAST of Lcy11g011900 vs. ExPASy TrEMBL
Match: A0A1R3KBZ2 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_09480 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 6.7e-23
Identity = 64/99 (64.65%), Postives = 78/99 (78.79%), Query Frame = 0


Query: 59  MAKNRNKKKQSGAMSMDITENTFNELPQAMDVSESAVHKPASGAPNLKLKKRRPMKRSKN 118
           MAKNR KKKQ+GA SMD++E T  +LPQAMD SE+ V KP SGA  +K+KK RPMKRSKN
Sbjct: 1   MAKNRKKKKQNGATSMDVSEGTIPDLPQAMDTSETGVSKPDSGAVKIKMKKGRPMKRSKN 60

Query: 119 VRNIKAMAKAISKGEQTTEKILKNQSKIIRIQSAKTLYE 158
           VR IK++AKAI+K EQ  EK  K++SK  R QSAK+LY+
Sbjct: 61  VRRIKSVAKAIAKNEQYAEKTTKSESKKSRTQSAKSLYD 99

[Close]

BLAST of Lcy11g011900 vs. NCBI nr
Match: KAG6577394.1 (Chlorophyll a-b binding protein 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 152.1 bits (383), Expect = 3.9e-33
Identity = 85/104 (81.73%), Postives = 91/104 (87.50%), Query Frame = 0


Query: 54  SHLSAMAKNRNKKKQSGAMSMDITENTFNELPQAMDVSESAVHKPASGAPNLKLKKRRPM 113
           ++LSAMAKN+NKKK+SGA+SMDITENT  ELPQAMDVSESAVHKPASGA NLKLKK RPM
Sbjct: 273 AYLSAMAKNKNKKKRSGAISMDITENTAQELPQAMDVSESAVHKPASGALNLKLKKGRPM 332

Query: 114 KRSKNVRNIKAMAKAISKGEQTTEKILKNQSKIIRIQSAKTLYE 158
           KRSKNVR   A AKAISK EQ+ EKILKNQSK  RI SAKTLYE
Sbjct: 333 KRSKNVRKTMAKAKAISKNEQSAEKILKNQSKTTRIHSAKTLYE 376

[Close]

BLAST of Lcy11g011900 vs. NCBI nr
Match: XP_038903593.1 (uncharacterized protein LOC120090147 [Benincasa hispida])

HSP 1 Score: 151.4 bits (381), Expect = 6.6e-33
Identity = 83/99 (83.84%), Postives = 88/99 (88.89%), Query Frame = 0


Query: 59  MAKNRNKKKQSGAMSMDITENTFNELPQAMDVSESAVHKPASGAPNLKLKKRRPMKRSKN 118
           MAKNRNKKK+SG +SMD+TENT +ELPQAMDVSESAVHKP SGA NLKLKK RPMKRSKN
Sbjct: 1   MAKNRNKKKRSGPVSMDVTENTVHELPQAMDVSESAVHKPTSGALNLKLKKGRPMKRSKN 60

Query: 119 VRNIKAMAKAISKGEQTTEKILKNQSKIIRIQSAKTLYE 158
           VR  KAMAKAISK EQ+TEKILKNQSK  RIQSAK LYE
Sbjct: 61  VRKTKAMAKAISKSEQSTEKILKNQSKTARIQSAKALYE 99

[Close]

BLAST of Lcy11g011900 vs. NCBI nr
Match: XP_022929206.1 (uncharacterized protein LOC111435867 [Cucurbita moschata] >KAG7015471.1 hypothetical protein SDJN02_23107 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 146.7 bits (369), Expect = 1.6e-31
Identity = 82/99 (82.83%), Postives = 86/99 (86.87%), Query Frame = 0


Query: 59  MAKNRNKKKQSGAMSMDITENTFNELPQAMDVSESAVHKPASGAPNLKLKKRRPMKRSKN 118
           MAKN+NKKK+SGA+SMDITENT  ELPQAMDVSESAVHKPASGA NLKLKK RPMKRSKN
Sbjct: 1   MAKNKNKKKRSGAISMDITENTAQELPQAMDVSESAVHKPASGALNLKLKKGRPMKRSKN 60

Query: 119 VRNIKAMAKAISKGEQTTEKILKNQSKIIRIQSAKTLYE 158
           VR   A AKAISK EQ+ EKILKNQSK  RI SAKTLYE
Sbjct: 61  VRKTMAKAKAISKNEQSAEKILKNQSKTTRIHSAKTLYE 99

[Close]

BLAST of Lcy11g011900 vs. NCBI nr
Match: XP_008452291.1 (PREDICTED: uncharacterized protein LOC103493362 [Cucumis melo])

HSP 1 Score: 144.1 bits (362), Expect = 1.1e-30
Identity = 79/99 (79.80%), Postives = 87/99 (87.88%), Query Frame = 0


Query: 59  MAKNRNKKKQSGAMSMDITENTFNELPQAMDVSESAVHKPASGAPNLKLKKRRPMKRSKN 118
           MAKNRNKKK+ GA+SMD+TEN+ +ELPQAMDVS S VHKPASGA +LKLKK RPMKRSKN
Sbjct: 1   MAKNRNKKKRGGAVSMDVTENSVHELPQAMDVSASTVHKPASGALDLKLKKGRPMKRSKN 60

Query: 119 VRNIKAMAKAISKGEQTTEKILKNQSKIIRIQSAKTLYE 158
           VR  KA+AKAISK EQ+ EKILKNQSK  RIQSAKTLYE
Sbjct: 61  VRKTKAIAKAISKSEQSMEKILKNQSKTTRIQSAKTLYE 99

[Close]

BLAST of Lcy11g011900 vs. NCBI nr
Match: XP_022985277.1 (uncharacterized protein LOC111483316 [Cucurbita maxima])

HSP 1 Score: 141.0 bits (354), Expect = 8.9e-30
Identity = 81/99 (81.82%), Postives = 86/99 (86.87%), Query Frame = 0


Query: 59  MAKNRNKKKQSGAMSMDITENTFNELPQAMDVSESAVHKPASGAPNLKLKKRRPMKRSKN 118
           MAKN+NKK+ SGA+SMDITENT +ELPQAMDVSESAVHKPASGA NLKLKK RPMKRSKN
Sbjct: 1   MAKNKNKKR-SGAISMDITENTAHELPQAMDVSESAVHKPASGALNLKLKKGRPMKRSKN 60

Query: 119 VRNIKAMAKAISKGEQTTEKILKNQSKIIRIQSAKTLYE 158
           VR   A AKAISK EQ+ EKILKNQSK  RI SAKTLYE
Sbjct: 61  VRKTMAKAKAISKNEQSAEKILKNQSKTTRIHSAKTLYE 98

[Close]

BLAST of Lcy11g011900 vs. TAIR 10
Match: AT4G27380.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 43.1 bits (100), Expect = 2.4e-04
Identity = 33/84 (39.29%), Postives = 47/84 (55.95%), Query Frame = 0


Query: 59  MAKNRNKKKQSGAMSMDITE--NTFNELPQAMDVSESAVHKPASGAPNL-KLKKRRPMKR 118
           M K RNKK +    SMD++E  +     PQ MD +E+   K AS A +L   +K +PMKR
Sbjct: 1   MTKKRNKKNRDEEASMDVSESQSVSEATPQVMDTTETGDGKLASRARSLMSTRKGKPMKR 60

Query: 119 SKNVRNIKAMAKAISKGEQTTEKI 140
           +K   N+KA+A A+   E    K+
Sbjct: 61  TKIAMNMKAVAVAMDTTETGDVKL 84

The following BLAST results are available for this feature:

BLAST of Lcy11g011900 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy11g011900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EMH0	7.9e-32	82.83	uncharacterized protein LOC111435867 OS=Cucurbita moschata OX=3662 GN=LOC1114358...	[more]
A0A1S3BUB2	5.1e-31	79.80	uncharacterized protein LOC103493362 OS=Cucumis melo OX=3656 GN=LOC103493362 PE=...	[more]
A0A6J1J4F8	4.3e-30	81.82	uncharacterized protein LOC111483316 OS=Cucurbita maxima OX=3661 GN=LOC111483316...	[more]
A0A6A6MLZ5	7.2e-25	69.70	Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_025020 PE=4 SV=1	[more]
A0A1R3KBZ2	6.7e-23	64.65	Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_09480 PE=4 SV=1	[more]

BLAST of Lcy11g011900 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6577394.1	3.9e-33	81.73	Chlorophyll a-b binding protein 3, chloroplastic, partial [Cucurbita argyrosperm...	[more]
XP_038903593.1	6.6e-33	83.84	uncharacterized protein LOC120090147 [Benincasa hispida]	[more]
XP_022929206.1	1.6e-31	82.83	uncharacterized protein LOC111435867 [Cucurbita moschata] >KAG7015471.1 hypothet...	[more]
XP_008452291.1	1.1e-30	79.80	PREDICTED: uncharacterized protein LOC103493362 [Cucumis melo]	[more]
XP_022985277.1	8.9e-30	81.82	uncharacterized protein LOC111483316 [Cucurbita maxima]	[more]

BLAST of Lcy11g011900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27380.1	2.4e-04	39.29	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..117
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 92..117
None	No IPR available	PANTHER	PTHR36385	OS07G0562900 PROTEIN	coord: 59..157

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g011900.1	Lcy11g011900.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane