Lcy11g010320 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g010320
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Unknown protein
Location	Chr11: 11537255 .. 11542648 (-)
RNA-Seq Expression	Lcy11g010320
Synteny	Lcy11g010320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGAAAGGGAAGGGAGGATCTGCAGGATCTATTACGGTTGTGAGCAACGGTGCGACTGCGGGATCTGCTACGGCTGTGAGCGACGGTACGACTGCCAAGTGTGGTGCGACTAAGGCTGTGAGTGCAGTGCGACTACGGGGAGGGAGGAACAAAACCCACGAAACCCAGATCTGGGTTTAATTCCTTCTTTTCTAAATCAACAAGAAAGAAAGGGAAGAGAAGAAGAAGAAGAAAAAAAAAAGGGGGAGAAGAGAGCGAAGAAGAAAAAAAAGAGGAGAAAAAGGAATGATGGCGATGTTGGCGACCGACGGTGGTGGCTGTCAAGTGTGTTGAGATTAGGGTTTGAGAGTGGTGGAGAAGAAGATGGAAGAAGAAAGAAAAAAAGAAAAAAATAATAAAAAAGTATTTAATATATTATTTTATTTTGAAAAATTAAAAAAATATATTTTTAAATAAAAAAAAAAAACTAATGTCACGTCAGCAATCTGTTAGTGTTTAACGGAAAAATTAACTGAGAAACCAAGAGTGTAAGGGGCTAAAATTTCGAGTTTGAAAACTCAGGGACCAAAAGTGTATTTTTCCCTTAATTTAAATATTTTTGAATTTTGCATAAATTTTAGTTTGATTGATGCACAAAACTTTGAATAACTTTGTTAAAACTTGCAAATTTTGATAAAAATTTATCTCAATGTCGTTTTTTCTTTGAAACTTTATCAATTTTATACCATACAAATATTTTATGTTTGATTGGATGCATATATATAAGGATACTTTTTTTTTTTAATGATCTTTCCACTACAAGATTTTTGTTATTTTTTTTACGCCAAAAGAAATCTTTGGAAATAATTCCAAAAATGTCAAGATATTCTATCCCAACGCAAAATCTACGTTGAAAAAATTGGTCGGAATAGTCCTATCGAGATAAGTTTTTCGACACATTTTGACTTGTGTCGGAATAACTAGTGTTGATGATCAAATTTCGCTAGGTAAATTACCTTCGCTCCACGTGATAATCGACAGTGAATTTATTTGAGAGCGGAGGAAGACGTGACCTGCAAAAGAGTAAACTTGCACACCAGTGTGGTGCTAGCCACACCGCCTCCGATGCTTAAGTCAGAAAACGGGAGAGGAGAGCAAGAGAGTAAGAGAAGAGAGTCGAGAATTGAGTTCGGGTCCCCTTCTTCAGCGGTGAAGAAGGGTATAAATACCTGCTCATCCTAAAGTTTTCAGGAATTCGGAGGTGTTTCAGGACAAACCAGGCGGAACCGGGGCAGCTGGAGGCTGCAGGGACCGAGTGGAGTCAGTGGGACTCGGCCCGCGCAAGCCGACAATTTCGAGGGTAAAAATTTTTTTCTTTTTCTAGAATTTATTAATATAGATATATATTTGTTTAATCTTTCCCCCCAAAATATGGGCATTTAATTCAATGGTCAGTTTCTAGTGAGGTGGATGGCGTGGAAGGAGTTAGAATGGTGAAACTGAAAACGACAGTGACGTCCACAGAATAACAAAAGAGAAATACAGACAAAAACCCAACAGCCGACGACTCCGATGACAGACTTCATTGACTTCACATTTTAAAGGCGGAGACTTGTTTGTTTGGCAACGGGTTTACCCCCCTCCTCCCACGGATAACGACTTTCTCACATTTCTTCTCTCTTTCACACTCTTCCACCACTTCAAATTAAAATTAAAATTCAACCTTTCATACACACACAACCCCAAAAGAAAGAGAGAGAGGAAAAAAAATAATAATATTGTTATAGGTAAAAATAGACTACTCTGAATGTCAAGGAGCAGACGAGACCAGCACAACGTCCATTCGGAGCAAGAATCGAGCCATGGGGAAGTAGGGAACTGAGGAGATTGGGCCGAAGCCCAATCCCCGACCTTGAAAGTCACGGGAGGGTCCGGTTGGACCAGATCGGGTCCTGAATCGTCCCGGAACGGAGAAAACAACCCTAAAAAGCTGACTCAGGTATAAATATCCTTCTTCACGTTTGGAGAAGGATTCTAAACCTTGATATTCTCGACACTATTTACTTCTTATTTACCGACTTAAGCATTGGAGTAGGTGTGACAAACACCACACCGGTCTGTAGTTTCTACTGGTTTTGCAGGTCATGTCTATCTCAACCTCTACAAATTCACTGTTGGTGTCATGTGAAGGTTAATTAAGTTGCCTGACCGGATTTTGCCATCAACACATATTATTTATATTTTTTTGAACGCACCATAAGGAAAGACTTCTATTTTTCCTTATCATACAACATGCATATTAATTATATGGTGTGGTCCAAAACTTACTTTGTTACTCCCAAAAGTTACATTATTCTTTATTTATTGTGATGATTCTAGAAACAAAATTAATGCGTTAAAAGAGACAAATGAGATCCGTGTGCTTTAAAGTAAAACTCTTCTACACGTGAGAATTAGATTATTTTATTTTAAATGAAGTTTGTTAAAAAACGATATACTCTCTTTTAATTCTCGTAGTCTAATCAAGAAAGATATTTATTTAGTTGCTTTAATTTTTTTTATTACAAAGTTTCTTTAATTTAAAACGTGGCAACCTAACTCCTTGAATCTTAAACATTATTTTAATTGATCCTCATTTGTTGGAGATTGAATATTTGTTATTTGTTTTGAAGTCCTTGATAATTAAGAAAGCATCACAAACAACATATATTAGGAGTTGATGCAATCCATACATCAACTATTTTTTTCTTTTTGCAAATGCAACAAATGATGCATATATTTTGAAGTTATATTGTAGTTGGAAGGATATATAGATGTAACTAATGAAATAGAAAATCTATTGTCTGACATCATTTAAAATCAACCTACTTATATGAACTATAATATATATATATATATATATATATATATATATATATATATATATATATCATTTTTCTAAGGTTAACTTACAAGTTTAGTCTCTAAACTTTCAAAGTTATGTCAATTTGGTCCTTGAACTTTAAAAAGTGTCTAATAAGTCCCTGACTTTCAATTTTGTGTCTAATAGGTCCCTAATATATTCCAAATTTTTAAAACTTAACCAATCTACTAGATATAACATCAAATTTTATGCCTATTGAGACCTTAAACTTCCAATATTATATCTAGTAGGCTTGTGAATTTTTTAAAAAATTGTCGAATAGGTCAATGACATATTAGACACAAAATTGAAAGTTAGAAACCTATTGGACACAAGAGTGAAAGTTGAAGGACCTATTGAGAATTCTTTTTAAAATTCAGGGACCTACTGGATACAAAATTGAAAGTTCGAGGATATAATTGAAACTTAAAGTTTAGGATAAATTTGTAATTGAACTTTTTTCAAATTTCTTGTGTCCTTACACAAAAATGAATTGTTATTGTCAAGTCAAATAAACTAATTATGCACAAGAGAATATGATATCACCAAAAAAAAAAAAAAAAAATACCTCTAAACTTGGTACCTTGTTCCAATAAACCCTAAACTTTAAAAAGTTTCAAAAATATCCTTGACCTTTTTAAAATGTTCAAAAATACTCTTACCTGTTAAGTTTTGGATGAAAACGTTATAGTTTTAAATTCATTAATACCATTGACCTTTCAAAAAAATGTTAAACTACACTTACTGTTTCTCCTTTTTCTTCCTCTAGTCTGCAAATTCTTCTTCCATAAAAATTAATGTAAAACTTTGTTTATTGTTGTTCAACATCGCAAGTGTATGAATCCTTACAAGTAAAATATAGTAGATTGAGTACCATATCGTTCTCCACATGAAATGGATGCTCACTAGTTACCAAATTCTTTAGCTTCAATTTTATTTGAACACAAATTAATCAAGGATGGATGAAAATTAAAAATGCTTTGAATTAAATTATTTTAATAAAAACTAAAAAAAAAAAACAAACAAACAAACAAAGGAGTAAATTCAATTGGCTTGAAGTTCTAGAGCATTGATTTCATCATTATCTCCTCCTATTTTCCATTCATTAGTAATTGAAATCTTTTAACTTTTAAGTTGTCGGCAAACTCTATCTTATAGACTCAATATTCTCTTTTGAGAAATAACGAAATTCTTTGAACAGTAAATTGTCTACATCTCTATGACAATTCCAATTATTCAAATAATAAAGAACGTAAACCTACAAATTATCACAAATTTTACAAGTATATCTCTGTCTCATATATAAATTAGGGAAAATTATATATTCATATCTATCGATAATTCTTGTGATCTCTCAACCTCTAATTATGACATGAAATTGATGTAAAGAACGAGTAAATCTAAACGTACATTAATCTTAGAAAAATTTAAACTAAATACGAAATTGAAATATCAACTACTAACTAGGAAGAATAGGATTTCAATGAACGATTACATCAAAACTCGCATTAATAACAACTAATCTCTCTATGTTTTCCAAAAATTCTCCCTTGGTACTTCTCCCATAGAAAAGAAAGAATGATCGAATTTATAATTAGTGCTTTTCGACCCAGTGCCTATGTGCCATAAATAGCCCATTTTTTCTTCACTTTCCAGTTCGTAGTGCCTACGCGGTGTCATTCTATGTATTAAATTGATCAAAAAAATGTCCAAGTAAACCAACAAAATACTTTTAAAACCGCTACTTTACTAACCCTATAAAATTAACTCATCGTTTCAAATCCCCCACTCCAATGTTGTAAAAAAAAAAAATTAACTCATCGTTTATAAAGTCTATGTGAACACCGTGAAAACAAAGTTTTTTATTTAATATAAATATTGCATTAAAGGGAAACGAACGGAACAACTACCTCCCTAGAAAGGGGTTAATATTCTCAGGAAAAGTCCAGCCCAACAAAAAACAACCTTCTTCTGAATTGGAAGAAACATCCAAAAACCGAAAAAAAATTTTTCCAAAATTTCCGTACACAGCGAATCGCACCAGATTATGAGCTTCTTCATTTTGCGATCGCGGACTGTGAACGAAGGAGATCTTATCATACTCGGCAATCAGGCGCTCGATTTCATCGACCGAAAAGGAGATCTCCGATTGGTCTAAGTCTGCGTTATTTAGCAGATTGATCACGCCAATGGCATCGGAAACCACTTCGATGGGCGGGATATCCAGGTTTGGGCACGAAGCTCTGATAGTCGGTAAGCTTCTTAAACCTCCAAGAATCGCTCTCATCTCAAGCATCTTCACTGACCAATTGTCGTTAATTCTTCTTATGCCCGCACAGATAGTAGAACCTGAAGAGTCAAGCATGATCCAACCCACCCCTCCTCTGTTTTGGGATTCATCGCGAGAGGCGTCCACATTAAGCAGTCAAGCCAAGTCAGACATCAATCGTCAAAGCAGTGGAAGCAAAAGTATCGAAAGGGGAGAATTACCTCAGTTCCGAAGCAACTAA

mRNA sequence

ATGTCGAAAGGGAAGGGAGGATCTGCAGGATCTATTACGGTTGTGAGCAACGGTGCGACTGCGGGATCTGCTACGGCTGTGAGCGACGGTACGACTGCCAAGTGTGGTGCGACTAAGGCTGAGATCTTATCATACTCGGCAATCAGGCGCTCGATTTCATCGACCGAAAAGGAGATCTCCGATTGGTCTAAGTCTGCGTTATTTAGCAGATTGATCACGCCAATGGCATCGGAAACCACTTCGATGGGCGGGATATCCAGGTTTGGGCACGAAGCTCTGATAGTCGGTAAGCTTCTTAAACCTCCAAGAATCGCTCTCATCTCAAGCATCTTCACTGACCAATTGTCGTTAATTCTTCTTATGCCCGCACAGATAGTAGAACCTGAAGAGTCAAGCATGATCCAACCCACCCCTCCTCTGTTTTGGGATTCATCGCGAGAGGCGTCCACATTAAGCAGTCAAGCCAAGTCAGACATCAATCGTCAAAGCAGTGGAAGCAAAAGTATCGAAAGGGGAGAATTACCTCAGTTCCGAAGCAACTAA

Coding sequence (CDS)

ATGTCGAAAGGGAAGGGAGGATCTGCAGGATCTATTACGGTTGTGAGCAACGGTGCGACTGCGGGATCTGCTACGGCTGTGAGCGACGGTACGACTGCCAAGTGTGGTGCGACTAAGGCTGAGATCTTATCATACTCGGCAATCAGGCGCTCGATTTCATCGACCGAAAAGGAGATCTCCGATTGGTCTAAGTCTGCGTTATTTAGCAGATTGATCACGCCAATGGCATCGGAAACCACTTCGATGGGCGGGATATCCAGGTTTGGGCACGAAGCTCTGATAGTCGGTAAGCTTCTTAAACCTCCAAGAATCGCTCTCATCTCAAGCATCTTCACTGACCAATTGTCGTTAATTCTTCTTATGCCCGCACAGATAGTAGAACCTGAAGAGTCAAGCATGATCCAACCCACCCCTCCTCTGTTTTGGGATTCATCGCGAGAGGCGTCCACATTAAGCAGTCAAGCCAAGTCAGACATCAATCGTCAAAGCAGTGGAAGCAAAAGTATCGAAAGGGGAGAATTACCTCAGTTCCGAAGCAACTAA

Protein sequence

MSKGKGGSAGSITVVSNGATAGSATAVSDGTTAKCGATKAEILSYSAIRRSISSTEKEISDWSKSALFSRLITPMASETTSMGGISRFGHEALIVGKLLKPPRIALISSIFTDQLSLILLMPAQIVEPEESSMIQPTPPLFWDSSREASTLSSQAKSDINRQSSGSKSIERGELPQFRSN

Homology

The following BLAST results are available for this feature:

BLAST of Lcy11g010320 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy11g010320 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy11g010320 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy11g010320 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..180
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..180

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g010320.1	Lcy11g010320.1	mRNA