Lcy11g009950 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g009950
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	serine/threonine-protein phosphatase 7 long form homolog
Location	Chr11: 11003027 .. 11003520 (+)
RNA-Seq Expression	Lcy11g009950
Synteny	Lcy11g009950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGACAATTTGGGTGTCTCCAGCCAATTCCTTCCCCATGTGATACTGATATGAGGCTGCACACATATGACCTACGAGGCAGACATGAACGAAATTGGGTCAACTATTTGGCTCCACAAATTTCAATCTGGGATGCTCGACATGCTTCAATCGTTCTTGGTACACCCATCAACGGAGGTCCAGATGTTGAGCATGGGTACAATGAATGGTATGCTAGGATTAGCAGACGATTCATCACACAGGCAGGAGCTGCATATCATTTCGTGGTAAGAATTTATACTATAAGTTCATTATTAGACAATTTATAATCTACATTGTTTGATTTGGTTTTCAAATTTTTATTCAGCAAAATTTTGAAAACTTGTCGATCCGTGGTAGAAAGTCGATCGATAAACTAGCATCCGTCTATCGAGTTCGACGTCCTGTCGGAGATATTCCAGTTGAAGATGATGCACATGCTGAGGATCACAATAATCCAGATGAAGATGATTGA

mRNA sequence

ATGCGACAATTTGGGTGTCTCCAGCCAATTCCTTCCCCATGTGATACTGATATGAGGCTGCACACATATGACCTACGAGGCAGACATGAACGAAATTGGGTCAACTATTTGGCTCCACAAATTTCAATCTGGGATGCTCGACATGCTTCAATCGTTCTTGGTACACCCATCAACGGAGGTCCAGATGTTGAGCATGGGTACAATGAATGGTATGCTAGGATTAGCAGACGATTCATCACACAGGCAGGAGCTGCATATCATTTCGTGCAAAATTTTGAAAACTTGTCGATCCGTGGTAGAAAGTCGATCGATAAACTAGCATCCGTCTATCGAGTTCGACGTCCTGTCGGAGATATTCCAGTTGAAGATGATGCACATGCTGAGGATCACAATAATCCAGATGAAGATGATTGA

Coding sequence (CDS)

ATGCGACAATTTGGGTGTCTCCAGCCAATTCCTTCCCCATGTGATACTGATATGAGGCTGCACACATATGACCTACGAGGCAGACATGAACGAAATTGGGTCAACTATTTGGCTCCACAAATTTCAATCTGGGATGCTCGACATGCTTCAATCGTTCTTGGTACACCCATCAACGGAGGTCCAGATGTTGAGCATGGGTACAATGAATGGTATGCTAGGATTAGCAGACGATTCATCACACAGGCAGGAGCTGCATATCATTTCGTGCAAAATTTTGAAAACTTGTCGATCCGTGGTAGAAAGTCGATCGATAAACTAGCATCCGTCTATCGAGTTCGACGTCCTGTCGGAGATATTCCAGTTGAAGATGATGCACATGCTGAGGATCACAATAATCCAGATGAAGATGATTGA

Protein sequence

MRQFGCLQPIPSPCDTDMRLHTYDLRGRHERNWVNYLAPQISIWDARHASIVLGTPINGGPDVEHGYNEWYARISRRFITQAGAAYHFVQNFENLSIRGRKSIDKLASVYRVRRPVGDIPVEDDAHAEDHNNPDEDD

Homology

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BLAST of Lcy11g009950 vs. ExPASy Swiss-Prot
Match: Q9LNG5 (Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana OX=3702 GN=MAIL3 PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 8.7e-16
Identity = 46/131 (35.11%), Postives = 66/131 (50.38%), Query Frame = 0


Query: 1   MRQFGCLQPIPSPCDTDMRLHTYDLRGRHERNWVNYLAPQISIWDARHASIVLGTPINGG 60
           +RQFG  Q IP+PCD +  LH  D RG+ E +W    +  I +W+AR +S+V G P    
Sbjct: 364 LRQFGLHQTIPAPCDNEKALHAIDKRGKSEYDWSARHSRHIGLWEARVSSVVSGEPECSP 423

Query: 61  PDVEHGYNEWYARISRRFIT-----------QAGAAYH-FVQNFENLSIRGRKSIDKLAS 120
            D    Y EWY RI+RR I+             G A+   VQ    +  R R S+++  +
Sbjct: 424 MDYNDPYMEWYRRITRRIISPMNERRPGQFLPTGFAFQVLVQRVAAIHARSRASLEEELT 483

[Close]

BLAST of Lcy11g009950 vs. ExPASy TrEMBL
Match: A0A6J1E501 (serine/threonine-protein phosphatase 7 long form homolog OS=Momordica charantia OX=3673 GN=LOC111026102 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 6.4e-30
Identity = 68/136 (50.00%), Postives = 91/136 (66.91%), Query Frame = 0


Query: 1   MRQFGCLQPIPSPCDTDMRLHTYDLRGRHERNWVNYLAPQISIWDARHASIVLGTPINGG 60
           MRQFG +Q IP+ C+TDM+LHTYDLRGRHER+WV++LAPQI+ W+ RH  I+ G  IN  
Sbjct: 49  MRQFGWMQHIPAQCNTDMQLHTYDLRGRHERSWVSHLAPQITEWENRHNVIIQGQHINRD 108

Query: 61  PDVEHGYNEWYARISRRFITQAGAAYHFVQNFENLSIRGRKSIDKLASVYRVRRPVGDIP 120
            DVE  Y  WY  I+RR+IT+AGA+Y+++ N  N++  GR+S+  L + YRVR   G   
Sbjct: 109 EDVEPRYYCWYYSITRRYITRAGASYNYLNNLPNMTDLGRRSLQNLTNAYRVRHLDGP-E 168

Query: 121 VEDDAHAEDHNNPDED 137
             +  H    N P  D
Sbjct: 169 RREKRHQRGPNIPTND 183

[Close]

BLAST of Lcy11g009950 vs. ExPASy TrEMBL
Match: A0A6I9SGI0 (serine/threonine-protein phosphatase 7 long form homolog OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105060605 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 5.3e-16
Identity = 43/115 (37.39%), Postives = 64/115 (55.65%), Query Frame = 0


Query: 1   MRQFGCLQPIPSPCDTDMRLHTYDLRGRHERNWVNYLAPQISIWDARHASIVLGTPINGG 60
           +RQFG  QPIP  CDTD+RLH  DLRGR +++W       I +W++R   ++ G  ++G 
Sbjct: 357 LRQFGIRQPIPIDCDTDVRLHHVDLRGRVDQDWSITHQHFIQLWESRQDQVIDGASVDGT 416

Query: 61  PDVEHGYNEWYARISRRFITQAGAAYHFVQNFENLSIRGRKSIDKLASVYRVRRP 116
            D    Y +WY RI+RRFI + GA + ++             ID L  ++ + RP
Sbjct: 417 MDFHDPYMQWYRRITRRFICRTGAMFDYL-------------IDSLVRIHNLARP 458

[Close]

BLAST of Lcy11g009950 vs. ExPASy TrEMBL
Match: A0A1S4E383 (serine/threonine-protein phosphatase 7 long form homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498663 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 2.9e-14
Identity = 41/92 (44.57%), Postives = 55/92 (59.78%), Query Frame = 0


Query: 1   MRQFGCLQPIPSPCDTDMRLHTYDLRGRHERNWVNYLAPQISIWDARHASIVLGTPINGG 60
           +RQFG  QP+PS C+T+  LH  DLRG+H+++W       I+ W +R+   V G   N  
Sbjct: 360 LRQFGMHQPLPSFCNTNPALHRIDLRGKHDQDWCKIHVEYITKWHSRNEFCVKGVATN-E 419

Query: 61  PDVEHGYNEWYARISRRFITQAGAAYHFVQNF 93
           P V   Y  WY+ I+RRFIT  GA Y+ V NF
Sbjct: 420 PTVSDDYFSWYSSITRRFITTDGAYYYRVNNF 450

[Close]

BLAST of Lcy11g009950 vs. ExPASy TrEMBL
Match: A0A1S3CBQ7 (serine/threonine-protein phosphatase 7 long form homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498663 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 2.9e-14
Identity = 41/92 (44.57%), Postives = 55/92 (59.78%), Query Frame = 0


Query: 1   MRQFGCLQPIPSPCDTDMRLHTYDLRGRHERNWVNYLAPQISIWDARHASIVLGTPINGG 60
           +RQFG  QP+PS C+T+  LH  DLRG+H+++W       I+ W +R+   V G   N  
Sbjct: 342 LRQFGMHQPLPSFCNTNPALHRIDLRGKHDQDWCKIHVEYITKWHSRNEFCVKGVATN-E 401

Query: 61  PDVEHGYNEWYARISRRFITQAGAAYHFVQNF 93
           P V   Y  WY+ I+RRFIT  GA Y+ V NF
Sbjct: 402 PTVSDDYFSWYSSITRRFITTDGAYYYRVNNF 432

[Close]

BLAST of Lcy11g009950 vs. ExPASy TrEMBL
Match: A5AWR0 (PMD domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_044150 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 5.0e-14
Identity = 46/127 (36.22%), Postives = 64/127 (50.39%), Query Frame = 0


Query: 1   MRQFGCLQPIPSPCDTDMRLHTYDLRGRHERNWVNYLAPQISIWDARHASIVLGTPINGG 60
           +RQFG  Q IP PCDT+++LH+ D RGRH+  W  Y A  I +W AR  SIV G P    
Sbjct: 493 LRQFGFRQGIPRPCDTNLKLHSIDRRGRHDYCWWQYHAQYIDLWAAREQSIVSGEPEQQP 552

Query: 61  PDVEHGYNEWYARISRRFITQAGAAYHFVQNFENLSIRGRKSIDKLASVYRVRRPVGDIP 120
                 Y EWY  I+RRF+T    A      F+  ++     +  L ++++         
Sbjct: 553 MSHYDPYMEWYRSITRRFVTP--LADRSNTGFQPTAVTTHLLVQSLTNIHKQCGMTVSAF 612

Query: 121 VEDDAHA 128
             DDAH+
Sbjct: 613 NSDDAHS 617

[Close]

BLAST of Lcy11g009950 vs. NCBI nr
Match: XP_038891623.1 (serine/threonine-protein phosphatase 7 long form homolog [Benincasa hispida])

HSP 1 Score: 148.3 bits (373), Expect = 4.9e-32
Identity = 64/123 (52.03%), Postives = 88/123 (71.54%), Query Frame = 0


Query: 1   MRQFGCLQPIPSPCDTDMRLHTYDLRGRHERNWVNYLAPQISIWDARHASIVLGTPINGG 60
           M QFG LQ IP PC+ + RL ++DLRG+HER+W+ YLAPQI+IW+ RH  +V G PIN G
Sbjct: 164 MHQFGMLQQIPQPCNMEARLLSHDLRGKHERDWIAYLAPQITIWENRHCLVVNGPPINNG 223

Query: 61  PDVEHGYNEWYARISRRFITQAGAAYHFVQNFENLSIRGRKSIDKLASVYRVRRPVGDIP 120
              E GY EWY+ +SR +IT+A A+YH +    NLSI  ++ + +L S+YRVR   GD+P
Sbjct: 224 VGTEPGYIEWYSTVSRLYITKAEASYHLLAELPNLSISTQRVLRRLTSIYRVRYFDGDVP 283

Query: 121 VED 124
           +E+
Sbjct: 284 MEE 286

[Close]

BLAST of Lcy11g009950 vs. NCBI nr
Match: XP_022159786.1 (serine/threonine-protein phosphatase 7 long form homolog [Momordica charantia] >XP_022159787.1 serine/threonine-protein phosphatase 7 long form homolog [Momordica charantia])

HSP 1 Score: 140.2 bits (352), Expect = 1.3e-29
Identity = 68/136 (50.00%), Postives = 91/136 (66.91%), Query Frame = 0


Query: 1   MRQFGCLQPIPSPCDTDMRLHTYDLRGRHERNWVNYLAPQISIWDARHASIVLGTPINGG 60
           MRQFG +Q IP+ C+TDM+LHTYDLRGRHER+WV++LAPQI+ W+ RH  I+ G  IN  
Sbjct: 49  MRQFGWMQHIPAQCNTDMQLHTYDLRGRHERSWVSHLAPQITEWENRHNVIIQGQHINRD 108

Query: 61  PDVEHGYNEWYARISRRFITQAGAAYHFVQNFENLSIRGRKSIDKLASVYRVRRPVGDIP 120
            DVE  Y  WY  I+RR+IT+AGA+Y+++ N  N++  GR+S+  L + YRVR   G   
Sbjct: 109 EDVEPRYYCWYYSITRRYITRAGASYNYLNNLPNMTDLGRRSLQNLTNAYRVRHLDGP-E 168

Query: 121 VEDDAHAEDHNNPDED 137
             +  H    N P  D
Sbjct: 169 RREKRHQRGPNIPTND 183

[Close]

BLAST of Lcy11g009950 vs. NCBI nr
Match: XP_010942698.1 (serine/threonine-protein phosphatase 7 long form homolog [Elaeis guineensis])

HSP 1 Score: 94.0 bits (232), Expect = 1.1e-15
Identity = 43/115 (37.39%), Postives = 64/115 (55.65%), Query Frame = 0


Query: 1   MRQFGCLQPIPSPCDTDMRLHTYDLRGRHERNWVNYLAPQISIWDARHASIVLGTPINGG 60
           +RQFG  QPIP  CDTD+RLH  DLRGR +++W       I +W++R   ++ G  ++G 
Sbjct: 357 LRQFGIRQPIPIDCDTDVRLHHVDLRGRVDQDWSITHQHFIQLWESRQDQVIDGASVDGT 416

Query: 61  PDVEHGYNEWYARISRRFITQAGAAYHFVQNFENLSIRGRKSIDKLASVYRVRRP 116
            D    Y +WY RI+RRFI + GA + ++             ID L  ++ + RP
Sbjct: 417 MDFHDPYMQWYRRITRRFICRTGAMFDYL-------------IDSLVRIHNLARP 458

[Close]

BLAST of Lcy11g009950 vs. NCBI nr
Match: XP_010524593.1 (PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Tarenaya hassleriana] >XP_010524594.1 PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Tarenaya hassleriana])

HSP 1 Score: 91.7 bits (226), Expect = 5.4e-15
Identity = 47/131 (35.88%), Postives = 67/131 (51.15%), Query Frame = 0


Query: 1   MRQFGCLQPIPSPCDTDMRLHTYDLRGRHERNWVNYLAPQISIWDARHASIVLGTPINGG 60
           +RQFG  Q IP+PCD +  LH  D RG+ E +W       I +W+AR AS+VLG P  G 
Sbjct: 366 LRQFGLCQTIPAPCDNEKTLHAIDKRGKSEYDWSARHVRHIELWEAREASVVLGEPEYGP 425

Query: 61  PDVEHGYNEWYARISRRFIT-----------QAGAAYH-FVQNFENLSIRGRKSIDKLAS 120
            D    Y EWY RI+RR I+             G A+   VQ    +  R + S+++  +
Sbjct: 426 MDYNDPYMEWYRRITRRIISPMKERRPGQFQPTGFAFQMLVQRIAAIYARSKASLEEALT 485

[Close]

BLAST of Lcy11g009950 vs. NCBI nr
Match: XP_021727155.1 (uncharacterized protein LOC110694286 [Chenopodium quinoa])

HSP 1 Score: 88.6 bits (218), Expect = 4.6e-14
Identity = 43/91 (47.25%), Postives = 50/91 (54.95%), Query Frame = 0


Query: 1   MRQFGCLQPIPSPCDTDMRLHTYDLRGRHERNWVNYLAPQISIWDARHASIVLGTPINGG 60
           MRQFG  Q +P  CDT  RLH  D RG+ +RNW    A  I +W  R   +V G PI+G 
Sbjct: 46  MRQFGLRQTVPQQCDTSARLHRIDRRGKSDRNWRTEHAQYIDLWHRRLEFVVTGDPIHGV 105

Query: 61  PDVEHGYNEWYARISRRFI----TQAGAAYH 88
            D    Y EWY RI+RRFI    T   A YH
Sbjct: 106 MDPYDPYMEWYMRITRRFINPSYTPPSAHYH 136

[Close]

BLAST of Lcy11g009950 vs. TAIR 10
Match: AT1G48120.1 (hydrolases;protein serine/threonine phosphatases )

HSP 1 Score: 84.7 bits (208), Expect = 6.2e-17
Identity = 46/131 (35.11%), Postives = 66/131 (50.38%), Query Frame = 0


Query: 1   MRQFGCLQPIPSPCDTDMRLHTYDLRGRHERNWVNYLAPQISIWDARHASIVLGTPINGG 60
           +RQFG  Q IP+PCD +  LH  D RG+ E +W    +  I +W+AR +S+V G P    
Sbjct: 364 LRQFGLHQTIPAPCDNEKALHAIDKRGKSEYDWSARHSRHIGLWEARVSSVVSGEPECSP 423

Query: 61  PDVEHGYNEWYARISRRFIT-----------QAGAAYH-FVQNFENLSIRGRKSIDKLAS 120
            D    Y EWY RI+RR I+             G A+   VQ    +  R R S+++  +
Sbjct: 424 MDYNDPYMEWYRRITRRIISPMNERRPGQFLPTGFAFQVLVQRVAAIHARSRASLEEELT 483

The following BLAST results are available for this feature:

BLAST of Lcy11g009950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LNG5	8.7e-16	35.11	Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana...	[more]

BLAST of Lcy11g009950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E501	6.4e-30	50.00	serine/threonine-protein phosphatase 7 long form homolog OS=Momordica charantia ...	[more]
A0A6I9SGI0	5.3e-16	37.39	serine/threonine-protein phosphatase 7 long form homolog OS=Elaeis guineensis va...	[more]
A0A1S4E383	2.9e-14	44.57	serine/threonine-protein phosphatase 7 long form homolog isoform X1 OS=Cucumis m...	[more]
A0A1S3CBQ7	2.9e-14	44.57	serine/threonine-protein phosphatase 7 long form homolog isoform X2 OS=Cucumis m...	[more]
A5AWR0	5.0e-14	36.22	PMD domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_044150 PE=4 S...	[more]

BLAST of Lcy11g009950 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891623.1	4.9e-32	52.03	serine/threonine-protein phosphatase 7 long form homolog [Benincasa hispida]	[more]
XP_022159786.1	1.3e-29	50.00	serine/threonine-protein phosphatase 7 long form homolog [Momordica charantia] >...	[more]
XP_010942698.1	1.1e-15	37.39	serine/threonine-protein phosphatase 7 long form homolog [Elaeis guineensis]	[more]
XP_010524593.1	5.4e-15	35.88	PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Tarenaya ha...	[more]
XP_021727155.1	4.6e-14	47.25	uncharacterized protein LOC110694286 [Chenopodium quinoa]	[more]

BLAST of Lcy11g009950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G48120.1	6.2e-17	35.11	hydrolases;protein serine/threonine phosphatases	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g009950.1	Lcy11g009950.1	mRNA