Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAATTAAAACCAACTCTTCTTCTCCACACTCCCCATCTCTCTATAAATATCCCCCAATTATCCACGCCAATCCTTCACTTCTCCCAAATTTTCCTCTCCACTCCAAAATGGATTTCTTCTTCTTCGACAGAGCAGACAAGCCCCTTTCCAGCCCTATTCCCAGATGCAATCTCCTCCAAATCTTCGCCAAATTCTTCCGATTCCTAGAGCTCTGCTTTCTACTCGTTTTCTTTTCCTGGAGCCTCTCTCGCCTTCCGATCGCCGTCCGAATTTCCGGCGAGTACTTCGGAAAACTCTTCGCCTTCGTCGCCAGTCCTCTCTTCGGATTCCTCCTCTGTAACGCCATCATCGTCGCACTCGTTGCAAAACCTAGCCACTTTTCAGACCGCACCGCCGAAACCGATCGGATTTACCAAGACCTAATCGAAAAATCCGGAACCACCGACCTACCTGAATCGCTCGCGGAACGCGATGAGGAGGTGGAGATTGTGTACCAGGACAAACAGATCATCGCGGAGGCGATTAGTTCAATCGATCGCGAAATCGAAGTGAAGAACAACGCGGATCCGGAGTCGGAATCTGGAATAGATCATCCGAAAGTGATATTGAGGACTCTGTCGGAGAAGCTTAAGCCGAGAACACAGAGTGAGAAGCTCCGGCGATCGGAGACGGAGAAGTGCCGGAATCTGGAGCAATCGCATGACATTTTGTACTACCAGCAGGACGATTTGAGCAGCGAGGAATTTCAGAGGAAGATTGAGGCGTTCATAGCCAAAGAGAAGAAGTTTCGATGGGAAGAATCTTCCGCCATTGTACTCCACTGCGACGGTTAATCGCCGGTTGAAAATAAGCGACAAAAAAAAAAAAAAAAAAAGAAAACTCGGCTGTACGATTTGATCCTGTGCAATGTACAGAGTAAAATTTCTTTCTACCTTGAGAAGGGTAAAATTGGTATTTGACCTTCGTTCTAATTTTTCGTTGGAGGGACGGGGGTTCTGTTTGTCTGTTACTCGTCCCATGGTTGCTTGGTGGACTAGCATTTGACAACTGATCTGTGACGTTAATTTGGGATCAATTAGATGACAATTCAATTTTTGACTCATATATCTATTATTATCTTATATGCTTATTGAAAAAAAAAGACTC
mRNA sequence
AAAAATTAAAACCAACTCTTCTTCTCCACACTCCCCATCTCTCTATAAATATCCCCCAATTATCCACGCCAATCCTTCACTTCTCCCAAATTTTCCTCTCCACTCCAAAATGGATTTCTTCTTCTTCGACAGAGCAGACAAGCCCCTTTCCAGCCCTATTCCCAGATGCAATCTCCTCCAAATCTTCGCCAAATTCTTCCGATTCCTAGAGCTCTGCTTTCTACTCGTTTTCTTTTCCTGGAGCCTCTCTCGCCTTCCGATCGCCGTCCGAATTTCCGGCGAGTACTTCGGAAAACTCTTCGCCTTCGTCGCCAGTCCTCTCTTCGGATTCCTCCTCTGTAACGCCATCATCGTCGCACTCGTTGCAAAACCTAGCCACTTTTCAGACCGCACCGCCGAAACCGATCGGATTTACCAAGACCTAATCGAAAAATCCGGAACCACCGACCTACCTGAATCGCTCGCGGAACGCGATGAGGAGGTGGAGATTGTGTACCAGGACAAACAGATCATCGCGGAGGCGATTAGTTCAATCGATCGCGAAATCGAAGTGAAGAACAACGCGGATCCGGAGTCGGAATCTGGAATAGATCATCCGAAAGTGATATTGAGGACTCTGTCGGAGAAGCTTAAGCCGAGAACACAGAGTGAGAAGCTCCGGCGATCGGAGACGGAGAAGTGCCGGAATCTGGAGCAATCGCATGACATTTTGTACTACCAGCAGGACGATTTGAGCAGCGAGGAATTTCAGAGGAAGATTGAGGCGTTCATAGCCAAAGAGAAGAAGTTTCGATGGGAAGAATCTTCCGCCATTGTACTCCACTGCGACGGTTAATCGCCGGTTGAAAATAAGCGACAAAAAAAAAAAAAAAAAAAGAAAACTCGGCTGTACGATTTGATCCTGTGCAATGTACAGAGTAAAATTTCTTTCTACCTTGAGAAGGGTAAAATTGGTATTTGACCTTCGTTCTAATTTTTCGTTGGAGGGACGGGGGTTCTGTTTGTCTGTTACTCGTCCCATGGTTGCTTGGTGGACTAGCATTTGACAACTGATCTGTGACGTTAATTTGGGATCAATTAGATGACAATTCAATTTTTGACTCATATATCTATTATTATCTTATATGCTTATTGAAAAAAAAAGACTC
Coding sequence (CDS)
ATGGATTTCTTCTTCTTCGACAGAGCAGACAAGCCCCTTTCCAGCCCTATTCCCAGATGCAATCTCCTCCAAATCTTCGCCAAATTCTTCCGATTCCTAGAGCTCTGCTTTCTACTCGTTTTCTTTTCCTGGAGCCTCTCTCGCCTTCCGATCGCCGTCCGAATTTCCGGCGAGTACTTCGGAAAACTCTTCGCCTTCGTCGCCAGTCCTCTCTTCGGATTCCTCCTCTGTAACGCCATCATCGTCGCACTCGTTGCAAAACCTAGCCACTTTTCAGACCGCACCGCCGAAACCGATCGGATTTACCAAGACCTAATCGAAAAATCCGGAACCACCGACCTACCTGAATCGCTCGCGGAACGCGATGAGGAGGTGGAGATTGTGTACCAGGACAAACAGATCATCGCGGAGGCGATTAGTTCAATCGATCGCGAAATCGAAGTGAAGAACAACGCGGATCCGGAGTCGGAATCTGGAATAGATCATCCGAAAGTGATATTGAGGACTCTGTCGGAGAAGCTTAAGCCGAGAACACAGAGTGAGAAGCTCCGGCGATCGGAGACGGAGAAGTGCCGGAATCTGGAGCAATCGCATGACATTTTGTACTACCAGCAGGACGATTTGAGCAGCGAGGAATTTCAGAGGAAGATTGAGGCGTTCATAGCCAAAGAGAAGAAGTTTCGATGGGAAGAATCTTCCGCCATTGTACTCCACTGCGACGGTTAA
Protein sequence
MDFFFFDRADKPLSSPIPRCNLLQIFAKFFRFLELCFLLVFFSWSLSRLPIAVRISGEYFGKLFAFVASPLFGFLLCNAIIVALVAKPSHFSDRTAETDRIYQDLIEKSGTTDLPESLAERDEEVEIVYQDKQIIAEAISSIDREIEVKNNADPESESGIDHPKVILRTLSEKLKPRTQSEKLRRSETEKCRNLEQSHDILYYQQDDLSSEEFQRKIEAFIAKEKKFRWEESSAIVLHCDG
Homology
BLAST of Lcy11g008810 vs. ExPASy TrEMBL
Match:
A0A6J1C5K3 (uncharacterized protein LOC111008461 OS=Momordica charantia OX=3673 GN=LOC111008461 PE=4 SV=1)
HSP 1 Score: 329.3 bits (843), Expect = 1.3e-86
Identity = 192/252 (76.19%), Postives = 210/252 (83.33%), Query Frame = 0
Query: 1 MDFFFFDRADKPLSSPIPR--CNLLQIFAKFFRFLELCFLLVFFSWSLSRLPIAVRISGE 60
MDFFFFD+A+KP + IPR CNLLQIFAK FRFLELC LLVF SW LSRLP AVRISGE
Sbjct: 1 MDFFFFDKAEKP-PTAIPRSSCNLLQIFAKVFRFLELCLLLVFLSWILSRLPFAVRISGE 60
Query: 61 YFGKLFAFVASPLFGFLLCNAIIVALVAKPSHFSDRT------AETDRIYQDLIEKSGTT 120
YF KLFAFVASPLFGF+LCNAIIVALVAKPS S R ETDR+Y+DLI KSG
Sbjct: 61 YFTKLFAFVASPLFGFILCNAIIVALVAKPSQLSGRRVAVGDGGETDRLYEDLIVKSGNG 120
Query: 121 DLPESLAERDEEVEIVYQDKQIIAEAISSIDREIEVKNNADPESESGIDHPKVILRTLSE 180
DLPES E+ EIV+QDK+IIAEAI+SIDR++EVK + DPE+ESGIDHPKVI RTLSE
Sbjct: 121 DLPES---PSEDGEIVFQDKEIIAEAINSIDRDVEVK-STDPEAESGIDHPKVIRRTLSE 180
Query: 181 KLK---PRTQSEKLRRSETEKCRN-LEQSHDILYYQQDDLSSEEFQRKIEAFIAKEKKFR 240
K+K +TQSEKLRRSETEKCRN LEQSHDI+YY QDDLSSEEFQRKIEAFIA+EKKFR
Sbjct: 181 KIKRECSKTQSEKLRRSETEKCRNILEQSHDIVYY-QDDLSSEEFQRKIEAFIAREKKFR 240
BLAST of Lcy11g008810 vs. ExPASy TrEMBL
Match:
A0A6J1ERL9 (uncharacterized protein LOC111435910 OS=Cucurbita moschata OX=3662 GN=LOC111435910 PE=4 SV=1)
HSP 1 Score: 321.6 bits (823), Expect = 2.7e-84
Identity = 180/248 (72.58%), Postives = 201/248 (81.05%), Query Frame = 0
Query: 1 MDFFFFDRADKPLSSPIPRCNLLQIFAKFFRFLELCFLLVFFSWSLSRLPIAVRISGEYF 60
MDFFFFD+A+K +SS +PRCNLLQ+FAKFFR +E CFLLVF SW+LSRLPIAVRIS EYF
Sbjct: 1 MDFFFFDKAEK-VSSSVPRCNLLQLFAKFFRLIEFCFLLVFLSWTLSRLPIAVRISSEYF 60
Query: 61 GKLFAFVASPLFGFLLCNAIIVALVAKPSHFSDRTAETDRIYQDLIEKSGTTDLPESLAE 120
GKL F+ASPLFGFLLCNAIIVALVAKPS FS +AET+RIY++LIEKSG+ DLP+SLAE
Sbjct: 61 GKLLGFIASPLFGFLLCNAIIVALVAKPSQFSGHSAETERIYENLIEKSGSRDLPDSLAE 120
Query: 121 RD----EEVEIVYQDKQIIAEAISSIDREIEVKNNADPESESGIDHPKVILRTLSEKLKP 180
RD EEVEIVYQDKQII ESES +DHPKVILR+LSEKL
Sbjct: 121 RDSSIAEEVEIVYQDKQIIV------------------ESESVVDHPKVILRSLSEKLTR 180
Query: 181 R---TQSEKLRRSETEKCRNLEQSHDILYYQQDDLSSEEFQRKIEAFIAKEKKFRWEESS 240
TQSEKLRRSETEKCRNLE SHDIL++ Q+DLS+EEFQ+KIEAFIAKEKKFR EES
Sbjct: 181 ECVTTQSEKLRRSETEKCRNLEHSHDILFF-QEDLSNEEFQKKIEAFIAKEKKFRREESC 228
Query: 241 AIVLHCDG 242
AIVL CDG
Sbjct: 241 AIVLRCDG 228
BLAST of Lcy11g008810 vs. ExPASy TrEMBL
Match:
A0A6J1JK52 (uncharacterized protein LOC111486513 OS=Cucurbita maxima OX=3661 GN=LOC111486513 PE=4 SV=1)
HSP 1 Score: 318.9 bits (816), Expect = 1.8e-83
Identity = 184/245 (75.10%), Postives = 200/245 (81.63%), Query Frame = 0
Query: 1 MDFFFFDRADKPLSSPIPRCNLLQIFAKFFRFLELCFLLVFFSWSLSRLPIAVRISGEYF 60
MD FFF + +K LS NLLQIF KFFRFLELCFLL+F SWSLSRLPIA+ IS ++F
Sbjct: 1 MDLFFFHKTEKGLSP-----NLLQIFPKFFRFLELCFLLLFLSWSLSRLPIALTISADFF 60
Query: 61 GKLFAFVASPLFGFLLCNAIIVALVAKPSHFSDRTA-------ETDRIYQDLIEKSGTTD 120
KLF F+ASPLFGFLLCNAII AL+AKP+ FSDR+A E DRIY DLIEKSG+ D
Sbjct: 61 RKLFGFLASPLFGFLLCNAIIFALLAKPTKFSDRSAVTVVDGDEIDRIYADLIEKSGSDD 120
Query: 121 LPESLAERDEEVEIVYQDKQIIAEAISSIDREIEVKNNADPESESGIDHPKVILRTLSEK 180
+ E EVEIVYQDKQIIAE ISSI +IE + NAD ESESG+DHPKVILRTLSEK
Sbjct: 121 VHE------REVEIVYQDKQIIAEPISSIGHKIE-ERNADTESESGLDHPKVILRTLSEK 180
Query: 181 LKPRTQSEKLRRSETEKCRNLEQSHDILYYQQDDLSSEEFQRKIEAFIAKEKKFRWEESS 239
LKP+TQSEKLRRSETEKCRNLE SHDILYY QDDLSSEEFQRKIEAFIAKEKKFR EESS
Sbjct: 181 LKPKTQSEKLRRSETEKCRNLEHSHDILYY-QDDLSSEEFQRKIEAFIAKEKKFRREESS 232
BLAST of Lcy11g008810 vs. ExPASy TrEMBL
Match:
A0A6J1J794 (uncharacterized protein LOC111483214 OS=Cucurbita maxima OX=3661 GN=LOC111483214 PE=4 SV=1)
HSP 1 Score: 313.2 bits (801), Expect = 9.8e-82
Identity = 176/242 (72.73%), Postives = 198/242 (81.82%), Query Frame = 0
Query: 1 MDFFFFDRADKPLSSPIPRCNLLQIFAKFFRFLELCFLLVFFSWSLSRLPIAVRISGEYF 60
MDFFFFD+A+K +SS +PRCNLLQ+FAKFFRF+E CFLLVF SW+LSRLPIAVRISGEYF
Sbjct: 1 MDFFFFDKAEK-VSSSVPRCNLLQLFAKFFRFVEFCFLLVFLSWTLSRLPIAVRISGEYF 60
Query: 61 GKLFAFVASPLFGFLLCNAIIVALVAKPSHFSDRTAETDRIYQDLIEKSGTTDLPESLAE 120
GKL F+ASPLFGFLLCNAIIVALVAKPS FS +AET+RIY++LIEKSG+ DLP+SLAE
Sbjct: 61 GKLLGFIASPLFGFLLCNAIIVALVAKPSQFSGHSAETERIYENLIEKSGSNDLPDSLAE 120
Query: 121 RD----EEVEIVYQDKQIIAEAISSIDREIEVKNNADPESESGIDHPKVILRTLSEKLKP 180
RD E+VEIVYQDKQII ESES +DHPKVILR+LSEKL
Sbjct: 121 RDSSIAEDVEIVYQDKQIIV------------------ESESVVDHPKVILRSLSEKLTR 180
Query: 181 R---TQSEKLRRSETEKCRNLEQSHDILYYQQDDLSSEEFQRKIEAFIAKEKKFRWEESS 236
TQSEKLRRSETEKCRNLE SHDIL++ Q+DLS+EEFQ+KIEAFIAKEKKFR EES
Sbjct: 181 ECVTTQSEKLRRSETEKCRNLEHSHDILFF-QEDLSNEEFQKKIEAFIAKEKKFRREESC 222
BLAST of Lcy11g008810 vs. ExPASy TrEMBL
Match:
A0A6J1FRE0 (uncharacterized protein LOC111447754 OS=Cucurbita moschata OX=3662 GN=LOC111447754 PE=4 SV=1)
HSP 1 Score: 310.5 bits (794), Expect = 6.3e-81
Identity = 179/245 (73.06%), Postives = 197/245 (80.41%), Query Frame = 0
Query: 1 MDFFFFDRADKPLSSPIPRCNLLQIFAKFFRFLELCFLLVFFSWSLSRLPIAVRISGEYF 60
MD FFF + +K LS NLLQIF KFFRFLELCFLL+F SW LSRLPIA+ IS ++F
Sbjct: 1 MDLFFFHKTEKVLSP-----NLLQIFPKFFRFLELCFLLLFLSWILSRLPIALTISADFF 60
Query: 61 GKLFAFVASPLFGFLLCNAIIVALVAKPSHFSDRTA-------ETDRIYQDLIEKSGTTD 120
KLF F+ASPLFGFLLCNAII AL+ KP+ FSDR+A E DRIY DLIEKSG+
Sbjct: 61 RKLFGFLASPLFGFLLCNAIIFALLTKPTKFSDRSAVTVVDGDEIDRIYADLIEKSGSDG 120
Query: 121 LPESLAERDEEVEIVYQDKQIIAEAISSIDREIEVKNNADPESESGIDHPKVILRTLSEK 180
+ E +VE VY+DKQIIAE ISSID +IE + NAD ESESG+DHPKVILRTLSEK
Sbjct: 121 VHE------RKVETVYKDKQIIAEPISSIDHKIE-ERNADTESESGVDHPKVILRTLSEK 180
Query: 181 LKPRTQSEKLRRSETEKCRNLEQSHDILYYQQDDLSSEEFQRKIEAFIAKEKKFRWEESS 239
LKP+TQSEKLRRSETEKCRNLE SHDILYY QDDLSSEEFQRKIEAFIAKEKKFR EESS
Sbjct: 181 LKPKTQSEKLRRSETEKCRNLEHSHDILYY-QDDLSSEEFQRKIEAFIAKEKKFRREESS 232
BLAST of Lcy11g008810 vs. NCBI nr
Match:
XP_038888396.1 (uncharacterized protein LOC120078241 [Benincasa hispida])
HSP 1 Score: 330.5 bits (846), Expect = 1.2e-86
Identity = 191/253 (75.49%), Postives = 213/253 (84.19%), Query Frame = 0
Query: 1 MDFFFFDRADKPLSSPIPRCNLLQIFAKFFRFLELCFLLVFFSWSLSRLPIAVRISGEYF 60
MDFFFFD+A+K +S+PIPRCNLLQIFAKFFRFLEL FLL+F SW LSRLPIA+ +S EYF
Sbjct: 1 MDFFFFDKAEK-VSNPIPRCNLLQIFAKFFRFLELSFLLLFLSWILSRLPIALTVSAEYF 60
Query: 61 GKLFAFVASPLFGFLLCNAIIVALVAKPSHF--------SDRTAETDRIYQDLIEKSGTT 120
GKLFAFVA+PLFGFLLCNAIIVALVAKP+ F S +AE DRIY+DLIEK+G+
Sbjct: 61 GKLFAFVATPLFGFLLCNAIIVALVAKPTQFPRPASSTSSTSSAEADRIYEDLIEKTGSG 120
Query: 121 DLPESLAERDEEVEIVYQDKQIIAEAISSIDREIEVKNNADPESESGIDHPKVILRTLSE 180
DL +SL+ EEVEIVYQDKQIIAE I+SIDREIEVK N D E+ESG+ H KV+LRTLSE
Sbjct: 121 DLTDSLS---EEVEIVYQDKQIIAEGINSIDREIEVK-NTDLETESGLGHSKVMLRTLSE 180
Query: 181 KLKPR---TQSEKLRRSETEKCRNLEQSHDILYYQQDDLSSEEFQRKIEAFIAKEKKFRW 240
KL T+ EKLRRSETEKCRNLE S+DILY+ QDDLSSEEFQRKIEAFIAKEKKFR
Sbjct: 181 KLNRECVITEREKLRRSETEKCRNLEHSNDILYH-QDDLSSEEFQRKIEAFIAKEKKFRR 240
Query: 241 EESSAI-VLHCDG 242
EESSAI VLHCDG
Sbjct: 241 EESSAIVVLHCDG 247
BLAST of Lcy11g008810 vs. NCBI nr
Match:
XP_022136879.1 (uncharacterized protein LOC111008461, partial [Momordica charantia])
HSP 1 Score: 329.3 bits (843), Expect = 2.7e-86
Identity = 192/252 (76.19%), Postives = 210/252 (83.33%), Query Frame = 0
Query: 1 MDFFFFDRADKPLSSPIPR--CNLLQIFAKFFRFLELCFLLVFFSWSLSRLPIAVRISGE 60
MDFFFFD+A+KP + IPR CNLLQIFAK FRFLELC LLVF SW LSRLP AVRISGE
Sbjct: 1 MDFFFFDKAEKP-PTAIPRSSCNLLQIFAKVFRFLELCLLLVFLSWILSRLPFAVRISGE 60
Query: 61 YFGKLFAFVASPLFGFLLCNAIIVALVAKPSHFSDRT------AETDRIYQDLIEKSGTT 120
YF KLFAFVASPLFGF+LCNAIIVALVAKPS S R ETDR+Y+DLI KSG
Sbjct: 61 YFTKLFAFVASPLFGFILCNAIIVALVAKPSQLSGRRVAVGDGGETDRLYEDLIVKSGNG 120
Query: 121 DLPESLAERDEEVEIVYQDKQIIAEAISSIDREIEVKNNADPESESGIDHPKVILRTLSE 180
DLPES E+ EIV+QDK+IIAEAI+SIDR++EVK + DPE+ESGIDHPKVI RTLSE
Sbjct: 121 DLPES---PSEDGEIVFQDKEIIAEAINSIDRDVEVK-STDPEAESGIDHPKVIRRTLSE 180
Query: 181 KLK---PRTQSEKLRRSETEKCRN-LEQSHDILYYQQDDLSSEEFQRKIEAFIAKEKKFR 240
K+K +TQSEKLRRSETEKCRN LEQSHDI+YY QDDLSSEEFQRKIEAFIA+EKKFR
Sbjct: 181 KIKRECSKTQSEKLRRSETEKCRNILEQSHDIVYY-QDDLSSEEFQRKIEAFIAREKKFR 240
BLAST of Lcy11g008810 vs. NCBI nr
Match:
KAG6577225.1 (hypothetical protein SDJN03_24799, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 323.9 bits (829), Expect = 1.1e-84
Identity = 181/248 (72.98%), Postives = 202/248 (81.45%), Query Frame = 0
Query: 1 MDFFFFDRADKPLSSPIPRCNLLQIFAKFFRFLELCFLLVFFSWSLSRLPIAVRISGEYF 60
MDFFFFD+A+K +SS +PRCNLLQ+FAKFFRF+E CFLLVF SW+LSRLPIAVRIS EYF
Sbjct: 1 MDFFFFDKAEK-VSSSVPRCNLLQLFAKFFRFIEFCFLLVFISWTLSRLPIAVRISSEYF 60
Query: 61 GKLFAFVASPLFGFLLCNAIIVALVAKPSHFSDRTAETDRIYQDLIEKSGTTDLPESLAE 120
GKL F+ASPLFGFLLCNAIIVALVAKPS FS +AET+RIY++LIEKSG+ DLP+SLAE
Sbjct: 61 GKLLGFIASPLFGFLLCNAIIVALVAKPSQFSGHSAETERIYENLIEKSGSRDLPDSLAE 120
Query: 121 RD----EEVEIVYQDKQIIAEAISSIDREIEVKNNADPESESGIDHPKVILRTLSEKLKP 180
RD EEVEIVYQDKQII ESES +DHPKVILR+LSEKL
Sbjct: 121 RDSSIAEEVEIVYQDKQIIV------------------ESESVVDHPKVILRSLSEKLTR 180
Query: 181 R---TQSEKLRRSETEKCRNLEQSHDILYYQQDDLSSEEFQRKIEAFIAKEKKFRWEESS 240
TQSEKLRRSETEKCRNLE SHDIL++ Q+DLS+EEFQ+KIEAFIAKEKKFR EES
Sbjct: 181 ECVTTQSEKLRRSETEKCRNLEHSHDILFF-QEDLSNEEFQKKIEAFIAKEKKFRREESC 228
Query: 241 AIVLHCDG 242
AIVL CDG
Sbjct: 241 AIVLRCDG 228
BLAST of Lcy11g008810 vs. NCBI nr
Match:
KAG7015317.1 (hypothetical protein SDJN02_22952, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 323.2 bits (827), Expect = 2.0e-84
Identity = 180/248 (72.58%), Postives = 202/248 (81.45%), Query Frame = 0
Query: 1 MDFFFFDRADKPLSSPIPRCNLLQIFAKFFRFLELCFLLVFFSWSLSRLPIAVRISGEYF 60
MDFFFFD+A+K +SS +PRCNLLQ+FAKFFRF+E CFLLVF SW+LSRLPIAVRIS EYF
Sbjct: 1 MDFFFFDKAEK-VSSSVPRCNLLQLFAKFFRFIEFCFLLVFISWTLSRLPIAVRISSEYF 60
Query: 61 GKLFAFVASPLFGFLLCNAIIVALVAKPSHFSDRTAETDRIYQDLIEKSGTTDLPESLAE 120
GK+ F+ASPLFGFLLCNAIIVALVAKPS FS +AET+RIY++LIEKSG+ DLP+SLAE
Sbjct: 61 GKILGFIASPLFGFLLCNAIIVALVAKPSQFSGHSAETERIYENLIEKSGSRDLPDSLAE 120
Query: 121 RD----EEVEIVYQDKQIIAEAISSIDREIEVKNNADPESESGIDHPKVILRTLSEKLKP 180
RD EEVEIVYQDKQII ESES +DHPKVILR+LSEKL
Sbjct: 121 RDSSIAEEVEIVYQDKQIIV------------------ESESVVDHPKVILRSLSEKLTR 180
Query: 181 R---TQSEKLRRSETEKCRNLEQSHDILYYQQDDLSSEEFQRKIEAFIAKEKKFRWEESS 240
TQSEKLRRSETEKCRNLE SHDIL++ Q+DLS+EEFQ+KIEAFIAKEKKFR EES
Sbjct: 181 ECVTTQSEKLRRSETEKCRNLEHSHDILFF-QEDLSNEEFQKKIEAFIAKEKKFRREESC 228
Query: 241 AIVLHCDG 242
AIVL CDG
Sbjct: 241 AIVLRCDG 228
BLAST of Lcy11g008810 vs. NCBI nr
Match:
XP_022929278.1 (uncharacterized protein LOC111435910 [Cucurbita moschata])
HSP 1 Score: 321.6 bits (823), Expect = 5.7e-84
Identity = 180/248 (72.58%), Postives = 201/248 (81.05%), Query Frame = 0
Query: 1 MDFFFFDRADKPLSSPIPRCNLLQIFAKFFRFLELCFLLVFFSWSLSRLPIAVRISGEYF 60
MDFFFFD+A+K +SS +PRCNLLQ+FAKFFR +E CFLLVF SW+LSRLPIAVRIS EYF
Sbjct: 1 MDFFFFDKAEK-VSSSVPRCNLLQLFAKFFRLIEFCFLLVFLSWTLSRLPIAVRISSEYF 60
Query: 61 GKLFAFVASPLFGFLLCNAIIVALVAKPSHFSDRTAETDRIYQDLIEKSGTTDLPESLAE 120
GKL F+ASPLFGFLLCNAIIVALVAKPS FS +AET+RIY++LIEKSG+ DLP+SLAE
Sbjct: 61 GKLLGFIASPLFGFLLCNAIIVALVAKPSQFSGHSAETERIYENLIEKSGSRDLPDSLAE 120
Query: 121 RD----EEVEIVYQDKQIIAEAISSIDREIEVKNNADPESESGIDHPKVILRTLSEKLKP 180
RD EEVEIVYQDKQII ESES +DHPKVILR+LSEKL
Sbjct: 121 RDSSIAEEVEIVYQDKQIIV------------------ESESVVDHPKVILRSLSEKLTR 180
Query: 181 R---TQSEKLRRSETEKCRNLEQSHDILYYQQDDLSSEEFQRKIEAFIAKEKKFRWEESS 240
TQSEKLRRSETEKCRNLE SHDIL++ Q+DLS+EEFQ+KIEAFIAKEKKFR EES
Sbjct: 181 ECVTTQSEKLRRSETEKCRNLEHSHDILFF-QEDLSNEEFQKKIEAFIAKEKKFRREESC 228
Query: 241 AIVLHCDG 242
AIVL CDG
Sbjct: 241 AIVLRCDG 228
BLAST of Lcy11g008810 vs. TAIR 10
Match:
AT5G66440.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )
HSP 1 Score: 118.2 bits (295), Expect = 8.9e-27
Identity = 89/253 (35.18%), Postives = 135/253 (53.36%), Query Frame = 0
Query: 1 MDFFFFDRADKPLSSPIPRCNLLQIFAKFFRFLELCFLLVFFSWSLSRLPIAVRISGEYF 60
MD F FD + + R N +FFR E+C L+F W+ S+LP V+ISG +
Sbjct: 1 MDSFDFDNVKAEKAKALRRFNRFCRIGRFFRAAEVCVALLFIFWTFSQLPFVVQISGAFL 60
Query: 61 GKLFAFVASPLFGFLLCNAIIVALVAKPSHFSD---RTAETDRIYQDLIEKSGTTDLPES 120
++ A +++PLF FLL N+I+V L+ K S + +AET+ IYQ + P
Sbjct: 61 RRIAAVISTPLFVFLLGNSIVVVLLTKSSDQTTTAVASAETE-IYQAFVRSVENRSKP-- 120
Query: 121 LAERDEEVEIVYQDKQIIAEAISS-----IDR---EIEVKNNADPESESGIDHPKVILRT 180
++ D IVY DKQ+I + S +D +E+ +++ P S+ +
Sbjct: 121 -SDEDLTEGIVYDDKQVIVTDLDSNPNLTVDENMPHVEIDSDSSPHSKVYGRSKSDVSGK 180
Query: 181 LSEKLKPRTQSEKLRRSETEK-CR---NLEQSHDILYYQQDDLSSEEFQRKIEAFIAKEK 239
S + L+RSETEK C+ N + S + Y +DDLS+EEFQ+ IEAFIAK++
Sbjct: 181 QSSNMVMMMMKRSLQRSETEKFCKETENDDDSEEEKNYPEDDLSNEEFQKTIEAFIAKQR 240
BLAST of Lcy11g008810 vs. TAIR 10
Match:
AT4G34560.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66440.1); Has 67 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 56.6 bits (135), Expect = 3.2e-08
Identity = 66/245 (26.94%), Postives = 111/245 (45.31%), Query Frame = 0
Query: 1 MDFFFFDRADKPLSSPIPRCNLLQIFAKFFRFLELCFLLVFFSWSLSRLPI-AVRISGEY 60
MD F S I ++ F FR EL L++ +S+L +V+ISG+
Sbjct: 1 MDPIKFQHLKMEKSRGILNFQAIRSFTSLFRLFELLLLVIL----ISKLSFPSVKISGDI 60
Query: 61 FGKLFAFVASPLFGFLLCNAIIVALVAKPSHFSD--------RTAETDRIYQDLIEKSGT 120
F + F+ SP F F + NAI++ L+AK +S A ++ +YQ+ + KS
Sbjct: 61 FKEAAVFLVSPRFVFFIGNAIVITLLAKSGRYSSSHEPSKTATEAASNDLYQEFLHKS-E 120
Query: 121 TDLPESLAERDEEVEIVYQDKQIIAEAISSIDREIEVKNNADPESESGIDHPKVILRTLS 180
P A + E+++ K++ S R +S + K + T
Sbjct: 121 KKKPVVYATKTEQLKKPSGGKRV------SFGRS---------QSHKAFEAVKPLESTNG 180
Query: 181 EKLKPRTQSEKLRRSETEKCRNLEQSHDILYYQQDDLSSEEFQRKIEAFIAKEKKFRWEE 237
EK R SEK R C + ++ + +D +S+E+F+ KIEAFIA++K+ + +E
Sbjct: 181 EKNMKRYVSEKHMR----VCDSDKKVVVRVKKPEDGMSNEQFRTKIEAFIARQKRIQKDE 221
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1C5K3 | 1.3e-86 | 76.19 | uncharacterized protein LOC111008461 OS=Momordica charantia OX=3673 GN=LOC111008... | [more] |
A0A6J1ERL9 | 2.7e-84 | 72.58 | uncharacterized protein LOC111435910 OS=Cucurbita moschata OX=3662 GN=LOC1114359... | [more] |
A0A6J1JK52 | 1.8e-83 | 75.10 | uncharacterized protein LOC111486513 OS=Cucurbita maxima OX=3661 GN=LOC111486513... | [more] |
A0A6J1J794 | 9.8e-82 | 72.73 | uncharacterized protein LOC111483214 OS=Cucurbita maxima OX=3661 GN=LOC111483214... | [more] |
A0A6J1FRE0 | 6.3e-81 | 73.06 | uncharacterized protein LOC111447754 OS=Cucurbita moschata OX=3662 GN=LOC1114477... | [more] |
Match Name | E-value | Identity | Description | |
XP_038888396.1 | 1.2e-86 | 75.49 | uncharacterized protein LOC120078241 [Benincasa hispida] | [more] |
XP_022136879.1 | 2.7e-86 | 76.19 | uncharacterized protein LOC111008461, partial [Momordica charantia] | [more] |
KAG6577225.1 | 1.1e-84 | 72.98 | hypothetical protein SDJN03_24799, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG7015317.1 | 2.0e-84 | 72.58 | hypothetical protein SDJN02_22952, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_022929278.1 | 5.7e-84 | 72.58 | uncharacterized protein LOC111435910 [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
AT5G66440.1 | 8.9e-27 | 35.18 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
AT4G34560.1 | 3.2e-08 | 26.94 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |