Lcy11g008460 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g008460
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	protein SPIRAL1-like 5
Location	Chr11: 9025550 .. 9029040 (+)
RNA-Seq Expression	Lcy11g008460
Synteny	Lcy11g008460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAAAAAAAAAAACAGAGACAACTGCATAGCAATTTGAACAGTGAATAGACCACTCAACTAGACATCATATCAACCACAACAACAAAAAAAGAAAGCCCAAATCACACAAATATAAATCCATATATATACCCTTCACACTCATAGGGATCATCATATATATAAACAACCAACATTAGGGTTTCAACTTTTTTCTCTTTTCTGTCTGCAAATCTTTGCTGAAGATCAGATCAAGCCAATATCATCATCATGAGTAGAGGTGGCAGCTACGGCGGTGGAAGAAGCTCCTTGGGCTATCTCTTTGGAAACGATGATCAACCCAGAAAGCCCCAAGTCTCCAAAGTGGTTCTTCCTCCTCCTTATGGGATTGATCTCAACCCTGATGATACCAACAACAATCCTTCTCCATCTCCCAAACAAGCCGTCTCCAACAATTATCCCCGAGCTCATGGCCAAAACTCCGGCAACTTCATAACTGTAAGCACCATGTTCAATTATGGAATTTAAAATCATTTCTCGAACTTTTCTCGAAAATCGTTTGTTTTTGTGATGAGTTTCAGGATCGTCCATCAACCAAGGTGAAATCTGCTCCTGGGGGTGATTCATCACTAGGATATCTGTTTGGAGATAAGTGATGTGAAAGTTTATGTTTTCATATCTATAGCTGACTGTATTGGAAGGGAATTCTAAAGGGTATATATATATGCTTTAGTGTGTGGGATTTTCTAAATAAATGTGTGCAATTATTGTGTATTTGAAAGAAACATATAGCTTGGATTTGTAGTCCATATGTGTATAGTTTGGTGTAGTTTTGTGTGTTATATAGCAATCTATGTGTTAAAACAATCTGATGGTTTAGCAGATGTCTGTGGTTAAATATAAGGATCTTATACATGAAATTGCACTTTTCCTTTAATTAAGGTGTTTCGATCTTCATTGTGTTTGGTGGTTGCTGAAAAGGAGTTGAAGGGTTAGATATATTGCCAAAATCTTTAAAGATATTCATGTTCTTGATCAGCTAAGCTTTGTGTTTTTTTTATGTTTTGTTTGTTTGGTTTAAAGGCTCAATGTGTAAAGCAAATGTTAAGACATTCAGCTGCACCTGTTTATAATTGGGGTAATAAACAATGCACTAATGAGGAAAGGAATCTAAAAAGTATTTTGAATTTTCTTTCCCCTTGTTTCTCTCTTCTTAGACATTGTTGAAATGCTTAGATTATATATTAAACATACTTTGAGGTAGTTCTCAATTCTCCACTTTATTTGAATCTACTTAGTTTGCATCCAATATTTTTGGTGCGATCCTTTGGTTTATTTGATTAGAACGAAATGACCGAATTTTCCATGATAGATCAAAGGATCCAGGTGTATTATGGGAAAATACCCTCACCAATGCCGCTTCTTGGAGCTCTACATCTTATTTCTTTAATGACTATGATACTTCATCTGTTGCTTTAAATTGGAGAGCCTTCTTTTAATCTCTCCTCTCTTGTATGTCTCTTGCATACCTATTTTGTTTCCTCCTTAATGAAGTATCTTTTGTCTAAAAAAAAATTATACCTTTGATGAAAATTATTGTATGGTTATTAATGTTACATGATTTGCTATTTCAATATATATATATTGGTTCTGAGTGCAAACATATAGAATATAATTTGAGGTTGAGAAGTTTAAATTTGTATAGCATGAGTTTGAATTGGAGCCATTTCAAATATTTGAGTACTCAGATGGTGGATTTTAGAGACTTTGAGATTAAGCAAACTACCATTGTTGAGCTAGCATAGACTTCACTTCCTAGTTCTAGATTTATGAACTCATTCCATGAACCAAAGGCTCCCTAATTTACACTAACTATATTGTAACCTACTAGAATAGCTTCCTATGAGAGATTAAGCAAACTACCACATGTCGAGTATTGGGCTCGATTTCCTAGCTAGTTCTAGATATATAAACTCATTCCATGAACCAAACGCTCCCTAATTCATACCTAACTAGCTACTATATATATAAAAGAGTCCTCCTACTATGCATTATAAAAATTTTGAGTAGATGTCTAGCTCATTAATTTGAACAAGAATTAGTGTAGCCACCTCCTTTTAGTTTGACATGTATGGTGTTTTGTGAACAAGACAGGATATTTCTTATAATATTATTGGCTTGGCATGGAAGATGTCTAATAATATTCAAGATTCTCTCATTATGTATAAGTTAGTTGTATATATGATTGTGTCCATATGGATTAGAGGGTCTATATATAGAGTGTTAAATTCAGTGTGAATCCTTTCATCAACATGCTTTTGATGATAAAATTATTGAAGGAAACATTTCAAAGAACATTGAAGTTTGATTTTAATTACAGCCAAATTCAATAAGACTCATACTCAGAGAGAATGGGATGCAAAATTTCTGTTTGGAACAGAACACTATTTGATTGAGCAAAGTGATGGATTGACCACCTAAGAGACCCATTTGATAACGATTTTTGTTTTAGTTCTCTATTTTTGAAAATTGTGTTTGTTTTGTTACTATCTCTTTACTAACTTCATATTTCTTAAAAAAATGGTTGAATTCTTATCCTTTAAACAAAAGTTTTTTAAGACTAATTTTTGGCTTGAATTTTGAAAACAATTTTTAAAAGTAGATAATAAAACAAAAAAGCTTATAAGCTTAATTTTCAAAAACTAAATAACTATCCAGATTTTAATTTTTTTTTTTTATTTTGACAACATGTGGGATGAGGAATTTGATCCTTTAATCTCTTGATCTATGTCAGTTGAGCTATGTTTTTGTTGGCTATCAAGATCTTAATTTATTATTTGATAATTTCACACATACACATCAAGAGCATTCACAGACATAAATATTTCATAGAAATGACATGACAAATGTCAAACAGTTCTCACCTTAAAACTCTCGTAACAAAATTTATGAAAATTTTCTTAAAAAAAAAACAACAAAAAAATTTTGGTAGTATGGGAAATAAACAATTAAGTGGTAGGATAATGTCCCAACGTTGTCAAAACATTTCTTTGGAAGTATTAGAAATAAACAATTGAGTGTGGTAGGTTAATGTCTCAACGTTGTCTAAATTTTTGTGCTCAAACACACGAATAAAATATTAAGGTCATTATTAAAAATGTTTGTAACATATTTAGAGGAGAATCGTGAGTTTTTGAACACTCAAAAGTATTGTTTTCAAAAAGAGATATAAGAAAAAAAAAATGATGAAACTCAACCTTCTGCGCAAAATGCAAGTAAAGAGCCAACAAGATTTGTCCCATTACAATTAACAAACAAAACATATAACCACACACTACCCTTATCATACAATTAAATAATTCTTTGTTTTCTTTTTATTTGTACTCAAATCTCCTTAATTGATTCGTGTTTTATACTAATTATGGACATCTCTTTAAATGGTATGATATATTGTCTACCTAAGTTTAAGTGCAAATAAATTTGTTTTTTTAGTGATGGAAATGTTCTCC

mRNA sequence

AAAAAAAAAAAAAAAAAACAGAGACAACTGCATAGCAATTTGAACAGTGAATAGACCACTCAACTAGACATCATATCAACCACAACAACAAAAAAAGAAAGCCCAAATCACACAAATATAAATCCATATATATACCCTTCACACTCATAGGGATCATCATATATATAAACAACCAACATTAGGGTTTCAACTTTTTTCTCTTTTCTGTCTGCAAATCTTTGCTGAAGATCAGATCAAGCCAATATCATCATCATGAGTAGAGGTGGCAGCTACGGCGGTGGAAGAAGCTCCTTGGGCTATCTCTTTGGAAACGATGATCAACCCAGAAAGCCCCAAGTCTCCAAAGTGGTTCTTCCTCCTCCTTATGGGATTGATCTCAACCCTGATGATACCAACAACAATCCTTCTCCATCTCCCAAACAAGCCGTCTCCAACAATTATCCCCGAGCTCATGGCCAAAACTCCGGCAACTTCATAACTGATCGTCCATCAACCAAGGTGAAATCTGCTCCTGGGGGTGATTCATCACTAGGATATCTGTTTGGAGATAAGTGATGTGAAAGTTTATGTTTTCATATCTATAGCTGACTGTATTGGAAGGGAATTCTAAAGGGTATATATATATGCTTTAGTGTGTGGGATTTTCTAAATAAATGTGTGCAATTATTGTGTATTTGAAAGAAACATATAGCTTGGATTTGTAGTCCATATGTGTATAGTTTGGTGTAGTTTTGTGTGTTATATAGCAATCTATGTGTTAAAACAATCTGATGGTTTAGCAGATGTCTGTGGTTAAATATAAGGATCTTATACATGAAATTGCACTTTTCCTTTAATTAAGGTGTTTCGATCTTCATTGTGTTTGGTGGTTGCTGAAAAGGAGTTGAAGGGTTAGATATATTGCCAAAATCTTTAAAGATATTCATGTTCTTGATCAGCTAAGCTTTGTGTTTTTTTTATGTTTTGTTTGTTTGGTTTAAAGGCTCAATGTGTAAAGCAAATGTTAAGACATTCAGCTGCACCTGTTTATAATTGGGGTAATAAACAATGCACTAATGAGGAAAGGAATCTAAAAAGTATTTTGAATTTTCTTTCCCCTTGTTTCTCTCTTCTTAGACATTGTTGAAATGCTTAGATTATATATTAAACATACTTTGAGGTAGTTCTCAATTCTCCACTTTATTTGAATCTACTTAGTTTGCATCCAATATTTTTGGTGCGATCCTTTGGTTTATTTGATTAGAACGAAATGACCGAATTTTCCATGATAGATCAAAGGATCCAGGTGTATTATGGGAAAATACCCTCACCAATGCCGCTTCTTGGAGCTCTACATCTTATTTCTTTAATGACTATGATACTTCATCTGTTGCTTTAAATTGGAGAGCCTTCTTTTAATCTCTCCTCTCTTGTATGTCTCTTGCATACCTATTTTGTTTCCTCCTTAATGAAGTATCTTTTGTCTAAAAAAAAATTATACCTTTGATGAAAATTATTGTATGGTTATTAATGTTACATGATTTGCTATTTCAATATATATATATTGGTTCTGAGTGCAAACATATAGAATATAATTTGAGGTTGAGAAGTTTAAATTTGTATAGCATGAGTTTGAATTGGAGCCATTTCAAATATTTGAGTACTCAGATGGTGGATTTTAGAGACTTTGAGATTAAGCAAACTACCATTGTTGAGCTAGCATAGACTTCACTTCCTAGTTCTAGATTTATGAACTCATTCCATGAACCAAAGGCTCCCTAATTTACACTAACTATATTGTAACCTACTAGAATAGCTTCCTATGAGAGATTAAGCAAACTACCACATGTCGAGTATTGGGCTCGATTTCCTAGCTAGTTCTAGATATATAAACTCATTCCATGAACCAAACGCTCCCTAATTCATACCTAACTAGCTACTATATATATAAAAGAGTCCTCCTACTATGCATTATAAAAATTTTGAGTAGATGTCTAGCTCATTAATTTGAACAAGAATTAGTGTAGCCACCTCCTTTTAGTTTGACATGTATGGTGTTTTGTGAACAAGACAGGATATTTCTTATAATATTATTGGCTTGGCATGGAAGATGTCTAATAATATTCAAGATTCTCTCATTATGTATAAGTTAGTTGTATATATGATTGTGTCCATATGGATTAGAGGGTCTATATATAGAGTGTTAAATTCAGTGTGAATCCTTTCATCAACATGCTTTTGATGATAAAATTATTGAAGGAAACATTTCAAAGAACATTGAAGTTTGATTTTAATTACAGCCAAATTCAATAAGACTCATACTCAGAGAGAATGGGATGCAAAATTTCTGTTTGGAACAGAACACTATTTGATTGAGCAAAGTGATGGATTGACCACCTAAGAGACCCATTTGATAACGATTTTTGTTTTAGTTCTCTATTTTTGAAAATTGTGTTTGTTTTGTTACTATCTCTTTACTAACTTCATATTTCTTAAAAAAATGGTTGAATTCTTATCCTTTAAACAAAAGTTTTTTAAGACTAATTTTTGGCTTGAATTTTGAAAACAATTTTTAAAAGTAGATAATAAAACAAAAAAGCTTATAAGCTTAATTTTCAAAAACTAAATAACTATCCAGATTTTAATTTTTTTTTTTTATTTTGACAACATGTGGGATGAGGAATTTGATCCTTTAATCTCTTGATCTATGTCAGTTGAGCTATGTTTTTGTTGGCTATCAAGATCTTAATTTATTATTTGATAATTTCACACATACACATCAAGAGCATTCACAGACATAAATATTTCATAGAAATGACATGACAAATGTCAAACAGTTCTCACCTTAAAACTCTCGTAACAAAATTTATGAAAATTTTCTTAAAAAAAAAACAACAAAAAAATTTTGGTAGTATGGGAAATAAACAATTAAGTGGTAGGATAATGTCCCAACGTTGTCAAAACATTTCTTTGGAAGTATTAGAAATAAACAATTGAGTGTGGTAGGTTAATGTCTCAACGTTGTCTAAATTTTTGTGCTCAAACACACGAATAAAATATTAAGGTCATTATTAAAAATGTTTGTAACATATTTAGAGGAGAATCGTGAGTTTTTGAACACTCAAAAGTATTGTTTTCAAAAAGAGATATAAGAAAAAAAAAATGATGAAACTCAACCTTCTGCGCAAAATGCAAGTAAAGAGCCAACAAGATTTGTCCCATTACAATTAACAAACAAAACATATAACCACACACTACCCTTATCATACAATTAAATAATTCTTTGTTTTCTTTTTATTTGTACTCAAATCTCCTTAATTGATTCGTGTTTTATACTAATTATGGACATCTCTTTAAATGGTATGATATATTGTCTACCTAAGTTTAAGTGCAAATAAATTTGTTTTTTTAGTGATGGAAATGTTCTCC

Coding sequence (CDS)

ATGAGTAGAGGTGGCAGCTACGGCGGTGGAAGAAGCTCCTTGGGCTATCTCTTTGGAAACGATGATCAACCCAGAAAGCCCCAAGTCTCCAAAGTGGTTCTTCCTCCTCCTTATGGGATTGATCTCAACCCTGATGATACCAACAACAATCCTTCTCCATCTCCCAAACAAGCCGTCTCCAACAATTATCCCCGAGCTCATGGCCAAAACTCCGGCAACTTCATAACTGATCGTCCATCAACCAAGGTGAAATCTGCTCCTGGGGGTGATTCATCACTAGGATATCTGTTTGGAGATAAGTGA

Protein sequence

MSRGGSYGGGRSSLGYLFGNDDQPRKPQVSKVVLPPPYGIDLNPDDTNNNPSPSPKQAVSNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK

Homology

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BLAST of Lcy11g008460 vs. ExPASy Swiss-Prot
Match: Q8LGD1 (Protein SPIRAL1-like 5 OS=Arabidopsis thaliana OX=3702 GN=SP1L5 PE=2 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 7.5e-25
Identity = 61/102 (59.80%), Postives = 74/102 (72.55%), Query Frame = 0


Query: 1   MSRGGSYGGGRSSLGYLFGNDDQ-PRKPQVSKVVLP-PPYGIDLNPDDTNNNPSPSPKQA 60
           MSRGGS+GGG+SSLGYLFG+D++ P+ P       P PPYG+D   +D   +  P   + 
Sbjct: 1   MSRGGSFGGGQSSLGYLFGSDNEIPKTPAPPVAPKPAPPYGVDSTEEDHEADQKP---KI 60

Query: 61  VSNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 101
            +NNY R  GQNSGNF+TDRP+TKVKS PGG SSLGYLFGDK
Sbjct: 61  SNNNYQRVQGQNSGNFVTDRPTTKVKSVPGGGSSLGYLFGDK 99

[Close]

BLAST of Lcy11g008460 vs. ExPASy Swiss-Prot
Match: Q7Y1L9 (Protein SPIRAL1-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0417800 PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 5.2e-18
Identity = 56/114 (49.12%), Postives = 66/114 (57.89%), Query Frame = 0


Query: 1   MSRGGSYGGGRSSLGYLFGNDDQPR---KPQVSKVVLPPPYGI-------------DLNP 60
           MSRGGS GGG+SSLGYLFG ++ P+   KP  +    P P                    
Sbjct: 1   MSRGGSAGGGQSSLGYLFGGNEAPKPAAKPAPAAAPAPAPAPAPAAAVAAPAEKPSPAKA 60

Query: 61  DDTNNNPSPSPKQAVSNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG 99
           D T   P+       +NNY RA GQN+GNF+TDRPSTKV +APGG SSLGYLFG
Sbjct: 61  DATKQIPAGIQGSRSNNNYHRADGQNTGNFLTDRPSTKVHAAPGGGSSLGYLFG 114

[Close]

BLAST of Lcy11g008460 vs. ExPASy Swiss-Prot
Match: Q9LE54 (Protein SPIRAL1-like 2 OS=Arabidopsis thaliana OX=3702 GN=SP1L2 PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 2.0e-17
Identity = 54/106 (50.94%), Postives = 62/106 (58.49%), Query Frame = 0


Query: 1   MSRGGSYGGGRSSLGYLFGNDDQPRKPQVSKVV--------LPPPYGIDLNPDDTNNNPS 60
           M RG S GGG+SSLGYLFG+ + P+   V+K           PP      N  D+     
Sbjct: 1   MGRGVSAGGGQSSLGYLFGSGEAPKLAAVNKTPAETESSAHAPPTQAAAANAVDSIKQVP 60

Query: 61  PSPKQAVSNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG 99
                  +NNY RA GQN+GNFITDRPSTKV SAPGG SSL YLFG
Sbjct: 61  AGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLDYLFG 106

[Close]

BLAST of Lcy11g008460 vs. ExPASy Swiss-Prot
Match: B3H4F1 (Protein SPIRAL1-like 1 OS=Arabidopsis thaliana OX=3702 GN=SP1L1 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 9.8e-17
Identity = 54/116 (46.55%), Postives = 68/116 (58.62%), Query Frame = 0


Query: 1   MSRGGSYGGGRSSLGYLFGNDDQPRKPQVSKVVLPPPYGIDLNPDDTNNNPSPSPK---- 60
           M RG S GGG+SSLGYLFG+ + P KP ++    P    + ++ D       PSPK    
Sbjct: 1   MGRGVSVGGGQSSLGYLFGSGEAP-KPAINNAPAPSSETLPISAD-------PSPKHVAA 60

Query: 61  --------------QAVSNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG 99
                         ++ +NNY RA GQN+GNF+TDRPSTKV +APGG SSL YLFG
Sbjct: 61  QTVNVTKQIPAGINKSSTNNYIRADGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFG 108

[Close]

BLAST of Lcy11g008460 vs. ExPASy Swiss-Prot
Match: Q2QQ99 (Protein SPIRAL1-like 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0502000 PE=3 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 7.0e-15
Identity = 49/100 (49.00%), Postives = 60/100 (60.00%), Query Frame = 0


Query: 1  MSRGGSYGGGRSSLGYLFGNDDQPRKPQVSKVVLPPPYGIDLNPDDTNNNPSPSP---KQ 60
          M RG S GGG+SSLGYLFG  + P+  +    V  P       P  +       P   + 
Sbjct: 1  MGRGVSSGGGQSSLGYLFGGGEAPKSAEKPAPVQKPA------PSSSAEKLKEIPAGIQS 60

Query: 61 AVSNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLF 98
          + +NNY RA GQN GNF+TDRPSTKV++APGG SSL YLF
Sbjct: 61 SKANNYMRAEGQNCGNFLTDRPSTKVQAAPGGGSSLDYLF 94

[Close]

BLAST of Lcy11g008460 vs. ExPASy TrEMBL
Match: A0A0A0KUV0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G047940 PE=3 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 6.1e-46
Identity = 96/100 (96.00%), Postives = 96/100 (96.00%), Query Frame = 0


Query: 1   MSRGGSYGGGRSSLGYLFGNDDQPRKPQVSKVVLPPPYGIDLNPDDTNNNPSPSPKQAVS 60
           MSRGGSYGGGRSSLGYLFG DDQPRKPQVSKVVLPPPYGIDLNPDD NNNPSPSPKQ VS
Sbjct: 1   MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDHNNNPSPSPKQLVS 60

Query: 61  -NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD 100
            NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD
Sbjct: 61  NNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD 100

[Close]

BLAST of Lcy11g008460 vs. ExPASy TrEMBL
Match: A0A6J1J7K0 (protein SPIRAL1-like 5 OS=Cucurbita maxima OX=3661 GN=LOC111482082 PE=3 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 8.0e-46
Identity = 94/100 (94.00%), Postives = 96/100 (96.00%), Query Frame = 0


Query: 1   MSRGGSYGGGRSSLGYLFGNDDQPRKPQVSKVVLPPPYGIDLNPDDTNNNPSPSPKQAVS 60
           MSRGGSYGGGRSSLGYLFGNDD+PRKPQVSKVVLPPPYGID+NPDD  NNPSPSPKQA S
Sbjct: 1   MSRGGSYGGGRSSLGYLFGNDDEPRKPQVSKVVLPPPYGIDINPDD-QNNPSPSPKQAAS 60

Query: 61  NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 101
           NNYPRAHGQNSGNFITDRPSTKVKS PGGDSSLGYLFGDK
Sbjct: 61  NNYPRAHGQNSGNFITDRPSTKVKSVPGGDSSLGYLFGDK 99

[Close]

BLAST of Lcy11g008460 vs. ExPASy TrEMBL
Match: A0A6J1FLH4 (protein SPIRAL1-like 5 OS=Cucurbita moschata OX=3662 GN=LOC111446889 PE=3 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 8.0e-46
Identity = 94/100 (94.00%), Postives = 96/100 (96.00%), Query Frame = 0


Query: 1   MSRGGSYGGGRSSLGYLFGNDDQPRKPQVSKVVLPPPYGIDLNPDDTNNNPSPSPKQAVS 60
           MSRGGSYGGGRSSLGYLFGNDD+PRKPQVSKVVLPPPYGID+NPDD  NNPSPSPKQA S
Sbjct: 1   MSRGGSYGGGRSSLGYLFGNDDEPRKPQVSKVVLPPPYGIDINPDD-QNNPSPSPKQAAS 60

Query: 61  NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 101
           NNYPRAHGQNSGNFITDRPSTKVKS PGGDSSLGYLFGDK
Sbjct: 61  NNYPRAHGQNSGNFITDRPSTKVKSVPGGDSSLGYLFGDK 99

[Close]

BLAST of Lcy11g008460 vs. ExPASy TrEMBL
Match: A0A6J1C4I1 (protein SPIRAL1-like 5 OS=Momordica charantia OX=3673 GN=LOC111008404 PE=3 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 4.0e-45
Identity = 90/100 (90.00%), Postives = 96/100 (96.00%), Query Frame = 0


Query: 1   MSRGGSYGGGRSSLGYLFGNDDQPRKPQVSKVVLPPPYGIDLNPDDTNNNPSPSPKQAVS 60
           MSRGGSYGGGRSSLGYLFGNDDQP KPQVS+V+LPPPYGID++PDD +NNPSPSPKQ VS
Sbjct: 1   MSRGGSYGGGRSSLGYLFGNDDQPTKPQVSRVILPPPYGIDISPDDQSNNPSPSPKQLVS 60

Query: 61  NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 101
           NNYPRAHGQNSGNF+TDRPSTKVKSAPG DSSLGYLFGDK
Sbjct: 61  NNYPRAHGQNSGNFLTDRPSTKVKSAPGXDSSLGYLFGDK 100

[Close]

BLAST of Lcy11g008460 vs. ExPASy TrEMBL
Match: A0A5D3CZ49 (Protein SPIRAL1-like 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004680 PE=3 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.2e-44
Identity = 96/102 (94.12%), Postives = 97/102 (95.10%), Query Frame = 0


Query: 1   MSRGGSYGGGRSSLGYLFGNDDQPRKPQVSKVVLPPPYGIDLNPDDT-NNNPSPSPKQAV 60
           MSRGGSYGGGRSSLGYLFG DDQPRKPQVSKVVLPPPYGIDLNPDD  +NNPSPSPKQ V
Sbjct: 1   MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLV 60

Query: 61  S-NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 101
           S NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK
Sbjct: 61  SKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 102

[Close]

BLAST of Lcy11g008460 vs. NCBI nr
Match: XP_038883008.1 (protein SPIRAL1-like 5 [Benincasa hispida])

HSP 1 Score: 195.7 bits (496), Expect = 1.9e-46
Identity = 97/101 (96.04%), Postives = 97/101 (96.04%), Query Frame = 0


Query: 1   MSRGGSYGGGRSSLGYLFGNDDQPRKPQVSKVVLPPPYGIDLNPDD-TNNNPSPSPKQAV 60
           MSRGGSYGGGRSSLGYLFG DDQPRKPQVSKVVLPPPYGIDLNPDD  NNNPSPSPKQ V
Sbjct: 1   MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDNNNNNPSPSPKQLV 60

Query: 61  SNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 101
           SNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK
Sbjct: 61  SNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 101

[Close]

BLAST of Lcy11g008460 vs. NCBI nr
Match: XP_004146520.1 (protein SPIRAL1-like 5 [Cucumis sativus] >KGN53333.1 hypothetical protein Csa_015032 [Cucumis sativus])

HSP 1 Score: 193.0 bits (489), Expect = 1.3e-45
Identity = 96/100 (96.00%), Postives = 96/100 (96.00%), Query Frame = 0


Query: 1   MSRGGSYGGGRSSLGYLFGNDDQPRKPQVSKVVLPPPYGIDLNPDDTNNNPSPSPKQAVS 60
           MSRGGSYGGGRSSLGYLFG DDQPRKPQVSKVVLPPPYGIDLNPDD NNNPSPSPKQ VS
Sbjct: 1   MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDHNNNPSPSPKQLVS 60

Query: 61  -NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD 100
            NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD
Sbjct: 61  NNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD 100

[Close]

BLAST of Lcy11g008460 vs. NCBI nr
Match: XP_022941576.1 (protein SPIRAL1-like 5 [Cucurbita moschata] >XP_022983494.1 protein SPIRAL1-like 5 [Cucurbita maxima] >XP_023545276.1 protein SPIRAL1-like 5 [Cucurbita pepo subsp. pepo] >KAG6600565.1 Protein SPIRAL1-like 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031205.1 Protein SPIRAL1-like 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 192.6 bits (488), Expect = 1.7e-45
Identity = 94/100 (94.00%), Postives = 96/100 (96.00%), Query Frame = 0


Query: 1   MSRGGSYGGGRSSLGYLFGNDDQPRKPQVSKVVLPPPYGIDLNPDDTNNNPSPSPKQAVS 60
           MSRGGSYGGGRSSLGYLFGNDD+PRKPQVSKVVLPPPYGID+NPDD  NNPSPSPKQA S
Sbjct: 1   MSRGGSYGGGRSSLGYLFGNDDEPRKPQVSKVVLPPPYGIDINPDD-QNNPSPSPKQAAS 60

Query: 61  NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 101
           NNYPRAHGQNSGNFITDRPSTKVKS PGGDSSLGYLFGDK
Sbjct: 61  NNYPRAHGQNSGNFITDRPSTKVKSVPGGDSSLGYLFGDK 99

[Close]

BLAST of Lcy11g008460 vs. NCBI nr
Match: XP_022136791.1 (protein SPIRAL1-like 5 [Momordica charantia])

HSP 1 Score: 190.3 bits (482), Expect = 8.2e-45
Identity = 90/100 (90.00%), Postives = 96/100 (96.00%), Query Frame = 0


Query: 1   MSRGGSYGGGRSSLGYLFGNDDQPRKPQVSKVVLPPPYGIDLNPDDTNNNPSPSPKQAVS 60
           MSRGGSYGGGRSSLGYLFGNDDQP KPQVS+V+LPPPYGID++PDD +NNPSPSPKQ VS
Sbjct: 1   MSRGGSYGGGRSSLGYLFGNDDQPTKPQVSRVILPPPYGIDISPDDQSNNPSPSPKQLVS 60

Query: 61  NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 101
           NNYPRAHGQNSGNF+TDRPSTKVKSAPG DSSLGYLFGDK
Sbjct: 61  NNYPRAHGQNSGNFLTDRPSTKVKSAPGXDSSLGYLFGDK 100

[Close]

BLAST of Lcy11g008460 vs. NCBI nr
Match: XP_008452039.1 (PREDICTED: protein SPIRAL1-like 5 [Cucumis melo] >KAA0044824.1 protein SPIRAL1-like 5 [Cucumis melo var. makuwa] >TYK16640.1 protein SPIRAL1-like 5 [Cucumis melo var. makuwa])

HSP 1 Score: 188.7 bits (478), Expect = 2.4e-44
Identity = 96/102 (94.12%), Postives = 97/102 (95.10%), Query Frame = 0


Query: 1   MSRGGSYGGGRSSLGYLFGNDDQPRKPQVSKVVLPPPYGIDLNPDDT-NNNPSPSPKQAV 60
           MSRGGSYGGGRSSLGYLFG DDQPRKPQVSKVVLPPPYGIDLNPDD  +NNPSPSPKQ V
Sbjct: 1   MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLV 60

Query: 61  S-NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 101
           S NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK
Sbjct: 61  SKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 102

[Close]

BLAST of Lcy11g008460 vs. TAIR 10
Match: AT4G23496.1 (SPIRAL1-like5 )

HSP 1 Score: 114.4 bits (285), Expect = 5.3e-26
Identity = 61/102 (59.80%), Postives = 74/102 (72.55%), Query Frame = 0


Query: 1   MSRGGSYGGGRSSLGYLFGNDDQ-PRKPQVSKVVLP-PPYGIDLNPDDTNNNPSPSPKQA 60
           MSRGGS+GGG+SSLGYLFG+D++ P+ P       P PPYG+D   +D   +  P   + 
Sbjct: 1   MSRGGSFGGGQSSLGYLFGSDNEIPKTPAPPVAPKPAPPYGVDSTEEDHEADQKP---KI 60

Query: 61  VSNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 101
            +NNY R  GQNSGNF+TDRP+TKVKS PGG SSLGYLFGDK
Sbjct: 61  SNNNYQRVQGQNSGNFVTDRPTTKVKSVPGGGSSLGYLFGDK 99

[Close]

BLAST of Lcy11g008460 vs. TAIR 10
Match: AT1G69230.1 (SPIRAL1-like2 )

HSP 1 Score: 89.7 bits (221), Expect = 1.4e-18
Identity = 54/106 (50.94%), Postives = 62/106 (58.49%), Query Frame = 0


Query: 1   MSRGGSYGGGRSSLGYLFGNDDQPRKPQVSKVV--------LPPPYGIDLNPDDTNNNPS 60
           M RG S GGG+SSLGYLFG+ + P+   V+K           PP      N  D+     
Sbjct: 1   MGRGVSAGGGQSSLGYLFGSGEAPKLAAVNKTPAETESSAHAPPTQAAAANAVDSIKQVP 60

Query: 61  PSPKQAVSNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG 99
                  +NNY RA GQN+GNFITDRPSTKV SAPGG SSL YLFG
Sbjct: 61  AGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLDYLFG 106

[Close]

BLAST of Lcy11g008460 vs. TAIR 10
Match: AT1G69230.2 (SPIRAL1-like2 )

HSP 1 Score: 89.7 bits (221), Expect = 1.4e-18
Identity = 54/106 (50.94%), Postives = 62/106 (58.49%), Query Frame = 0


Query: 1   MSRGGSYGGGRSSLGYLFGNDDQPRKPQVSKVV--------LPPPYGIDLNPDDTNNNPS 60
           M RG S GGG+SSLGYLFG+ + P+   V+K           PP      N  D+     
Sbjct: 1   MGRGVSAGGGQSSLGYLFGSGEAPKLAAVNKTPAETESSAHAPPTQAAAANAVDSIKQVP 60

Query: 61  PSPKQAVSNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG 99
                  +NNY RA GQN+GNFITDRPSTKV SAPGG SSL YLFG
Sbjct: 61  AGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLDYLFG 106

[Close]

BLAST of Lcy11g008460 vs. TAIR 10
Match: AT1G26355.1 (SPIRAL1-like1 )

HSP 1 Score: 87.4 bits (215), Expect = 7.0e-18
Identity = 54/116 (46.55%), Postives = 68/116 (58.62%), Query Frame = 0


Query: 1   MSRGGSYGGGRSSLGYLFGNDDQPRKPQVSKVVLPPPYGIDLNPDDTNNNPSPSPK---- 60
           M RG S GGG+SSLGYLFG+ + P KP ++    P    + ++ D       PSPK    
Sbjct: 1   MGRGVSVGGGQSSLGYLFGSGEAP-KPAINNAPAPSSETLPISAD-------PSPKHVAA 60

Query: 61  --------------QAVSNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG 99
                         ++ +NNY RA GQN+GNF+TDRPSTKV +APGG SSL YLFG
Sbjct: 61  QTVNVTKQIPAGINKSSTNNYIRADGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFG 108

[Close]

BLAST of Lcy11g008460 vs. TAIR 10
Match: AT2G03680.1 (spiral1 )

HSP 1 Score: 80.5 bits (197), Expect = 8.5e-16
Identity = 57/125 (45.60%), Postives = 65/125 (52.00%), Query Frame = 0


Query: 1   MSRGGSYGGGRSSLGYLFGNDDQPRKPQVSKVVLPPPYGIDLNPDDTNNNPSPSPKQAVS 60
           M RG S GGG+SSL YLFG D    KP    V  P P      P ++NN P+P P  AV+
Sbjct: 1   MGRGNSCGGGQSSLDYLFGGDAPAPKP----VPAPRP-----APTESNNGPAP-PVTAVT 60

Query: 61  ----------------------------NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSS 98
                                       NNY RA GQN+GNF+TDRPSTKV +APGG SS
Sbjct: 61  ATALTTATTSVEPAELNKQIPAGIKTPVNNYARAEGQNTGNFLTDRPSTKVHAAPGGGSS 115

The following BLAST results are available for this feature:

BLAST of Lcy11g008460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LGD1	7.5e-25	59.80	Protein SPIRAL1-like 5 OS=Arabidopsis thaliana OX=3702 GN=SP1L5 PE=2 SV=1	[more]
Q7Y1L9	5.2e-18	49.12	Protein SPIRAL1-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0417800 ...	[more]
Q9LE54	2.0e-17	50.94	Protein SPIRAL1-like 2 OS=Arabidopsis thaliana OX=3702 GN=SP1L2 PE=2 SV=1	[more]
B3H4F1	9.8e-17	46.55	Protein SPIRAL1-like 1 OS=Arabidopsis thaliana OX=3702 GN=SP1L1 PE=2 SV=1	[more]
Q2QQ99	7.0e-15	49.00	Protein SPIRAL1-like 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0502000 ...	[more]

BLAST of Lcy11g008460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KUV0	6.1e-46	96.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G047940 PE=3 SV=1	[more]
A0A6J1J7K0	8.0e-46	94.00	protein SPIRAL1-like 5 OS=Cucurbita maxima OX=3661 GN=LOC111482082 PE=3 SV=1	[more]
A0A6J1FLH4	8.0e-46	94.00	protein SPIRAL1-like 5 OS=Cucurbita moschata OX=3662 GN=LOC111446889 PE=3 SV=1	[more]
A0A6J1C4I1	4.0e-45	90.00	protein SPIRAL1-like 5 OS=Momordica charantia OX=3673 GN=LOC111008404 PE=3 SV=1	[more]
A0A5D3CZ49	1.2e-44	94.12	Protein SPIRAL1-like 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2...	[more]

BLAST of Lcy11g008460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883008.1	1.9e-46	96.04	protein SPIRAL1-like 5 [Benincasa hispida]	[more]
XP_004146520.1	1.3e-45	96.00	protein SPIRAL1-like 5 [Cucumis sativus] >KGN53333.1 hypothetical protein Csa_01...	[more]
XP_022941576.1	1.7e-45	94.00	protein SPIRAL1-like 5 [Cucurbita moschata] >XP_022983494.1 protein SPIRAL1-like...	[more]
XP_022136791.1	8.2e-45	90.00	protein SPIRAL1-like 5 [Momordica charantia]	[more]
XP_008452039.1	2.4e-44	94.12	PREDICTED: protein SPIRAL1-like 5 [Cucumis melo] >KAA0044824.1 protein SPIRAL1-l...	[more]

BLAST of Lcy11g008460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23496.1	5.3e-26	59.80	SPIRAL1-like5	[more]
AT1G69230.1	1.4e-18	50.94	SPIRAL1-like2	[more]
AT1G69230.2	1.4e-18	50.94	SPIRAL1-like2	[more]
AT1G26355.1	7.0e-18	46.55	SPIRAL1-like1	[more]
AT2G03680.1	8.5e-16	45.60	spiral1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..80
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..100
None	No IPR available	PANTHER	PTHR33403:SF19	PROTEIN SPIRAL1-LIKE 5	coord: 1..100
IPR039613	Protein SPIRAL1-like	PANTHER	PTHR33403	SPR1	coord: 1..100

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g008460.1	Lcy11g008460.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043622	cortical microtubule organization
cellular_component	GO:0010005	cortical microtubule, transverse to long axis