Lcy11g007880 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g007880
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	WD_REPEATS_REGION domain-containing protein
Location	Chr11: 8155918 .. 8161086 (-)
RNA-Seq Expression	Lcy11g007880
Synteny	Lcy11g007880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACAAACCCCGAACCCAGAGGGCTGAAGACTCGTAGCAGGTGAAGGCGCGAACAAGAAATTGGGAGTTGAGATGGAGAAGGCTATGGCGACCTTCGACAATGGCACGGTTTGTTCAGCTTGGAACTACTCCGCCAACAGATTTGCCACCGGTTTGGCCGACGGAACCCTCGTCATCTTCGACTCTCCCGACCCTTCTTCTTCATCGACGTCCTTAACTCGCACTTCAAGCTTCAAGGTTTTTGAGTTTCTTTTCACTGTTTTTATTTCAGTTGGACTTCATACTCTTACTCTGAATTCATGGTTGCTTAGAGCTAATCTTACTTCTAAATGATTATTAGTTCACATTTCAACAATGGGCGACGTCTTAAGATTTTGGTTTCGTGCTTAGATTAGATTTAATGGAGCCTTTCTGTATGCTGTGAGTCTATCGATCAAGAGAGAAAGGGAAATAAGAGTGGAAGCGTTCAATGAGGAGGGAATTATTGGGTATAAAGGAGTGAAATTGGGTTATTGATGGCTGGAGGAGAGAATTATAGATATCGGTCTCTTTTTTATTGAATCATGTCATACTTTTCGCAAATCAGGATAACTAATTCAAAGCCAACTAGGACGTTTGTTCTCTCCCTTCTTGTTTCATCTGGTGGTTTATGTTTTATGTTGTTTTCTTGATGGAGGCAAGGGCTTTAACTTTTAAGCTTGTGAAAATTTTGAAGGTGGAAAGGGCAATGTGCACTTAAAAGCATATTTGGTATATAAATTAAATAGCCAGAAGGCTTGCAGATATATTATTGAGTCATTGATAAATTCATTAATTTCGACACCTCTGCTAACATTTTGAAAGCTGGTAGATGCATTTTGAGTTCTTATTAGGCCTCTCTCTCTGAGATTTTGGCCTGTTAAACCTTGATCCAGAAAAGCTTTTAACGAGTGAAGTTTGCTCTAGCCTTAACCAGGTGAAACCATCTTTGTAGGCACATGAGGCTGCAATTTTTAAGATTGTTTGGGTCCCTCCAGAGTATGGTGATTCTGTTGCATGCATTTGTTCAGATGGATCTGCATCATTGTGGGAGGAGATTGTTGAAGGTAAATCATTTGGTTTTTGTTGACCCTGGGTCCTCTCTCAAATTTTATTGTTACATTAGCTATGTCTATTTCTTTCATCTTATGTTCCCCTTTACTTGGCCCAAGAGCATTATACATAAATGCTAAACCCTCATTTGACTAAAATTCGAAGTGTCCCTATCATTGTGTAAATCTATTGCCTGTTGCTGCTTTCTAGATGCCCAGCCTCTGCAGTGGAAGCTATGCAAACGCTTCAAAAGTAATTCATCCCAAATCCTTGACATCCAATCTGGAAATTCCTCCTCTGGTCTGAAAATGGTAAATGATGATATTTCTTCTGATTCTTTTTCTAGATATATATCCTTAAGTGCTGTTATTGGCGGATGATTGCTATGTTTTTTTTGCTTCTTGGCAATTGCTGTTGATTTTTAAGGCATACAATTACTTCATTTTATACGACTTCGGAGCTAACTTATCATCATTTATCCCTCCATATTGAAATGTTATAAGGATTTGTTTTAATATAAATGTGATAATTGGATCAACAATAATGCACTGTGGATGGTTAAAATATTTTCTCGTCATTTAATTTTCATTAGATTTTGTTATGTTCACAAAAGCTTCTTTCCTATTAGAAAACCCTTTATATTCTTCTTTTGTTTTGTTTTTTTATTTTTTTTACAGATTGTAGCATTTTCAGATGGTCATGTAAAAGTTTATGAGCTTATGGATCCTTTGGATTTGAAGAGTTGGCAACTTCAGGTGATCTATCTTTTAATCCTTTTTCAGTTTATCTAATTTTATTAGGCTTCGAAAGGTATCATTTGAATAACTTATTCCTGTGTAATCTTGCAATCCGAGGAAAGATATACCGTAATTCTTTTTAACATTGGTAAGACTGATCGATATAATTTCTTCTTTTATAATAAAAACTGACTTTTTGATTTCCTTCAATTCAAAATTATCTATCTTTTTAACCTACTGATGTGTCACATCTATATTCCAATGTTTTAATGCTGCTCCCATTCGGCAATTCCATAGTTGTGTAACTATATCATTGGACATGGATATTTGTGTACTTATCTTGTGAATTGTCCAATATTCATTGTGTTGTGGAACATTTGGGGTGAAAGGAATAATAGAGTGTTTAGGGGGAGAGAGAGGGATCCCGAGGATATATGGTCCCTCACTCGCTATCATGTCTCTCTTTGGGCTTCGGTCTCAAAATTGTTTTTAATTATCCGTTAGGTTGTATCTTGCTTGATTGGGACCCCTTCCTCTAGTTGGGCGCCTTTTTTTGTGGGCTTGTTTTTTTGTATGCCCGTGTATTCTTTCATTTTTTCTCAATGAAAGTTGGTTTTTCATCCAAAAAAAAAAAATATATATTCATTGTGTTATGGTTCTACCACTATGTCAGAGCCCTCTGCTGTCAACAGTCTTTTGAATCATTCTTGGGGTTGCATGAATTTTGACGCCAAATCCTTTGCATTTTGTTGTTGGAAGATTGTGCTTAGAGAATATGGAGATCTGAAATATATTGCAACCAAATTCTCTTTGCTCCAGTCACTTCATCTTCCATCCCTTATCTCTCTTTAAAAGGGGAAAGAAAAAGAAAAGAAAAATGTGGTGTATGGACAGACACATAAACTCTCATGAAGGGAAGTATTTAGTTTGGGTCCTTTACCTTCCCTATGGCTTGTTTATTGACATATTAAGTGTTTCAAAAAGTAACACATCATGAATGGCTGGCTAGTGATATGATATTCATCTAGAAAACCAGATGAGCAACATCTGTGGAGTTTTAGGTGCTTAAAACCATCTTTATTTCTTGCCTTTTGGGTTAAATGAAGACCATGATGATTTATCTGCTTCAAATTACCAAGTTAGTAATGACCTTTTAAATAATTTTGACTCCTATTTTCTATTTTTGTTCAGGCTGAATTTCAGAATGTCATTGATTCCATTTCTACAGTCAGGAAAGCATCTTGCTTATCTGCAAGTATATCTTGGAATCCACATCGAGGTGAAAGACAACAATCAAGCTTTGTTTTGGCTTTTAATTCGGATACACCACAGCTTAATTCTGCCAAGGTATTCCAAATTCTTCTCATCTTATTACTGCAATCATAATTGTGATACAACCAGCTGCTCACAGCGTACTGGTCAGTCTACGATGATTGCATTAACTATGAAAATTGCATACCGTAGTTAATATGGTATTCCACAGGTTTGGGAATTTGATCAGGCTCATCAAAGATGGCTTCCTGTTGCAGAGTTGGCTTTGGCTTCAGACAAAGGAGATGAGGTTTATGCTGTTGCGTGGGCACAAAATATTGGAAGGTAATGGACTAAAGGAGCTACATATGATAGGTGTATCTGTGGCGCATTATAACTTTCAAACACATAGGTTCAGCAAAATATCTCTATATAATTAAACATTTTTATATAACAGATCTGATAAGCTATTTTGCCAAGTGCTAATTAATATCGGATTGCTACGATTAATTTTAAAAAGAAAACAGACTTCCATTACAAATGTTTTAAGAGAGATGGAAAGGGAGACTTCGAAATGTAATGCCTCCCAAATTTCCTTTTAATTCTTCAAGATATATCCCTGAAGATTCTGTGATTTCTCTCCATTAAAAGTTCCCGGGAAATTCCTTTGATAGCATTTCTCCGTGGGACATTTCCTTTTGAACTGTTGGCCTCCAAGAAATCGTGGCTCAAAACCCAAAGGAGCTTACCAAGAAATTATCATGCTATGTTGAACTCTTGCTAGAGAAAACAACAGAAATTTCCAAAAGGAATATACGATCTCTAAAGTTCCAAAGAACCAAATACGTTTGAAAATGATCTATAATATGCATTCTATTTGTTAAAAGTAAGAACAAGGGGTTGCAGGAGTAAATTTAGAGTCATCCAAGATACTGTAGAGTTGGCATGGGTTTGGCTTCCCCCTTTCCAGCAAAAGGGGAGAACAGCTGAATCTACAATTTCTATCATATATTCTATCAAAAAAACAATTTCTATCATATAGAGGTCCATTGGACCCGAGTCTAGATGTAGTAGGTCTGAACATCCCAGGGTATTGCCACTACCCCATTCTTTATGGAAGAGTTTCTGTAACAGTCCGGAGGAAATTAATATTAGAGGCCTTTCCTTATAGCCAACTCATAGTCTAGAAATTGGTAGCTCTTCCCTTGTTGGTTTTTATCATGTAGTCCTTTGATTTCTTTAAAGTTGTTAATAACTTTTGGAAAGAATCACCATGATGAGTCTTGATATAACCAAATTCATTCATGTGTTTACTTAAATCCTTAAAAATTGTTGAATAAGCTTAAATGATAACGGTGCTAATTGTTTTTAAAGTACATTTTAGGCCACATGAGGTAATAGCTGTTGCAACCCAGAAAGGAATTGCAATATGGCGTCTTGGATTAAACCCGGGCACAGATGGAAGGCTCTCAACAGAAAGAGTTGCTCTGCTTTCTGGGCATCATGGCGAGGTATCTCTTCAAAATTTCTCTCTTCTCTCATTCCCATTTATTTTCTTTTATATTTCTTGCAAATCCAAACACGAATGAATTCAAAACATCCATTTGTTAAGAGAAACACCTGGTGTAGAGAGAAGGAATTCATTTGAATCCATATCATTGGAACCTTATAAAATACGTATAATCACAATTGACTGCAAATGTTGCTAGATTTAGTTGTTATGGTTCCATGAACTGTGTGTTGAGAGTTTGTTCTGTTTGGATTATCCTTAGATAGGAGGGAAGATGTGATAGCTAATTGATAATCATGTTTTCACTTGTACTGTCAGGTTTGGGAGATGGAGTGGGACATGGGTGGTATGACATTGGCATCAACAGGAAAAGATATGATGGTCCGGTTATGGCAATCCAACCTCAATGGTGTTTGGCACCAACATGCTGCATTTGAGCCCACTTCTTAACCTTGAAAACATTTTGTTTCTATATGATGTAACCATTTCCTGTATTCAGTATAAGGAAGAATTTTTCAATTAATATTATTTTTGTCTTGCTCAGTGCGGTGCTAAGATTAGGGATGTCTTATTGGGAGACCCTTCGAGAAGATCAAATATC

mRNA sequence

CACAAACCCCGAACCCAGAGGGCTGAAGACTCGTAGCAGGTGAAGGCGCGAACAAGAAATTGGGAGTTGAGATGGAGAAGGCTATGGCGACCTTCGACAATGGCACGGTTTGTTCAGCTTGGAACTACTCCGCCAACAGATTTGCCACCGGTTTGGCCGACGGAACCCTCGTCATCTTCGACTCTCCCGACCCTTCTTCTTCATCGACGTCCTTAACTCGCACTTCAAGCTTCAAGGCACATGAGGCTGCAATTTTTAAGATTGTTTGGGTCCCTCCAGAGTATGGTGATTCTGTTGCATGCATTTGTTCAGATGGATCTGCATCATTGTGGGAGGAGATTGTTGAAGATGCCCAGCCTCTGCAGTGGAAGCTATGCAAACGCTTCAAAAGTAATTCATCCCAAATCCTTGACATCCAATCTGGAAATTCCTCCTCTGGTCTGAAAATGATTGTAGCATTTTCAGATGGTCATGTAAAAGTTTATGAGCTTATGGATCCTTTGGATTTGAAGAGTTGGCAACTTCAGGCTGAATTTCAGAATGTCATTGATTCCATTTCTACAGTCAGGAAAGCATCTTGCTTATCTGCAAGTATATCTTGGAATCCACATCGAGGTGAAAGACAACAATCAAGCTTTGTTTTGGCTTTTAATTCGGATACACCACAGCTTAATTCTGCCAAGGTTTGGGAATTTGATCAGGCTCATCAAAGATGGCTTCCTGTTGCAGAGTTGGCTTTGGCTTCAGACAAAGGAGATGAGGTTTATGCTGTTGCGTGGGCACAAAATATTGGAAGGCCACATGAGGTAATAGCTGTTGCAACCCAGAAAGGAATTGCAATATGGCGTCTTGGATTAAACCCGGGCACAGATGGAAGGCTCTCAACAGAAAGAGTTGCTCTGCTTTCTGGGCATCATGGCGAGGTTTGGGAGATGGAGTGGGACATGGGTGGTATGACATTGGCATCAACAGGAAAAGATATGATGGTCCGGTTATGGCAATCCAACCTCAATGGTGTTTGGCACCAACATGCTGCATTTGAGCCCACTTCTTAACCTTGAAAACATTTTGTTTCTATATGATGTAACCATTTCCTGTATTCAGTATAAGGAAGAATTTTTCAATTAATATTATTTTTGTCTTGCTCAGTGCGGTGCTAAGATTAGGGATGTCTTATTGGGAGACCCTTCGAGAAGATCAAATATC

Coding sequence (CDS)

ATGGAGAAGGCTATGGCGACCTTCGACAATGGCACGGTTTGTTCAGCTTGGAACTACTCCGCCAACAGATTTGCCACCGGTTTGGCCGACGGAACCCTCGTCATCTTCGACTCTCCCGACCCTTCTTCTTCATCGACGTCCTTAACTCGCACTTCAAGCTTCAAGGCACATGAGGCTGCAATTTTTAAGATTGTTTGGGTCCCTCCAGAGTATGGTGATTCTGTTGCATGCATTTGTTCAGATGGATCTGCATCATTGTGGGAGGAGATTGTTGAAGATGCCCAGCCTCTGCAGTGGAAGCTATGCAAACGCTTCAAAAGTAATTCATCCCAAATCCTTGACATCCAATCTGGAAATTCCTCCTCTGGTCTGAAAATGATTGTAGCATTTTCAGATGGTCATGTAAAAGTTTATGAGCTTATGGATCCTTTGGATTTGAAGAGTTGGCAACTTCAGGCTGAATTTCAGAATGTCATTGATTCCATTTCTACAGTCAGGAAAGCATCTTGCTTATCTGCAAGTATATCTTGGAATCCACATCGAGGTGAAAGACAACAATCAAGCTTTGTTTTGGCTTTTAATTCGGATACACCACAGCTTAATTCTGCCAAGGTTTGGGAATTTGATCAGGCTCATCAAAGATGGCTTCCTGTTGCAGAGTTGGCTTTGGCTTCAGACAAAGGAGATGAGGTTTATGCTGTTGCGTGGGCACAAAATATTGGAAGGCCACATGAGGTAATAGCTGTTGCAACCCAGAAAGGAATTGCAATATGGCGTCTTGGATTAAACCCGGGCACAGATGGAAGGCTCTCAACAGAAAGAGTTGCTCTGCTTTCTGGGCATCATGGCGAGGTTTGGGAGATGGAGTGGGACATGGGTGGTATGACATTGGCATCAACAGGAAAAGATATGATGGTCCGGTTATGGCAATCCAACCTCAATGGTGTTTGGCACCAACATGCTGCATTTGAGCCCACTTCTTAA

Protein sequence

MEKAMATFDNGTVCSAWNYSANRFATGLADGTLVIFDSPDPSSSSTSLTRTSSFKAHEAAIFKIVWVPPEYGDSVACICSDGSASLWEEIVEDAQPLQWKLCKRFKSNSSQILDIQSGNSSSGLKMIVAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLAFNSDTPQLNSAKVWEFDQAHQRWLPVAELALASDKGDEVYAVAWAQNIGRPHEVIAVATQKGIAIWRLGLNPGTDGRLSTERVALLSGHHGEVWEMEWDMGGMTLASTGKDMMVRLWQSNLNGVWHQHAAFEPTS

Homology

[Close]

BLAST of Lcy11g007880 vs. ExPASy Swiss-Prot
Match: Q93VR9 (Protein SEH1 OS=Arabidopsis thaliana OX=3702 GN=SEH1 PE=1 SV=1)

HSP 1 Score: 448.0 bits (1151), Expect = 9.3e-125
Identity = 205/325 (63.08%), Postives = 259/325 (79.69%), Query Frame = 0


Query: 1   MEKAMATFDNGTVCSAWNYSANRFATGLADGTLVIFDSPDPSSSSTSLTRTSSFKAHEAA 60
           M K+MAT D+GT CS+WN S +R A G  +G L I++S   +SSS++ + TS  +  E++
Sbjct: 1   MAKSMATLDSGTTCSSWNQSGDRLAAGSLNGKLSIYES--STSSSSTFSCTSKVRVSESS 60

Query: 61  IFKIVWVPPEYGDSVACICSDGSASLWEEIVEDAQPLQWKLCKRFKSNSSQILDIQSGNS 120
           I KIVW+P EYGD+VAC+C DGS S+WEE+ EDA  L+WKLCK  K+ SSQ+LD+Q G S
Sbjct: 61  IVKIVWLPSEYGDAVACVCEDGSLSIWEELSEDAHGLEWKLCKSMKNKSSQVLDVQFGVS 120

Query: 121 SSGLKMIVAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPH 180
              LKM+ A+SDG+++V+EL++PL+LK+WQLQAEFQNVIDS+ST+ K S LSAS+SWNP 
Sbjct: 121 RKSLKMVAAYSDGYLRVFELLNPLELKNWQLQAEFQNVIDSLSTLGKPSSLSASVSWNPM 180

Query: 181 RGERQQSSFVLAFNSDTPQLNSAKVWEFDQAHQRWLPVAELALASDKGDEVYAVAWAQNI 240
           +GE Q+ SFVLAFNSD+P LNS+K+WEFD+AH RWL VAELAL  DKGD VYA++WA NI
Sbjct: 181 KGEEQEPSFVLAFNSDSPHLNSSKIWEFDEAHNRWLAVAELALPEDKGDPVYALSWAPNI 240

Query: 241 GRPHEVIAVATQKGIAIWRLGLNPGTDGRLSTERVALLSGHHGEVWEMEWDMGGMTLAST 300
           GRP+EV+AVAT KGI IW +GL P  +GRL  ++V+ LSGH GEVW+MEWDM GMTLAST
Sbjct: 241 GRPYEVVAVATHKGIGIWHVGLAPDLEGRLPVKKVSSLSGHQGEVWQMEWDMSGMTLAST 300

Query: 301 GKDMMVRLWQSNLNGVWHQHAAFEP 326
           G D MV+LWQSNLNG WH+ A  EP
Sbjct: 301 GSDGMVKLWQSNLNGEWHEQATLEP 323

[Close]

BLAST of Lcy11g007880 vs. ExPASy Swiss-Prot
Match: C1BK83 (Nucleoporin SEH1 OS=Osmerus mordax OX=8014 GN=seh1l PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.3e-30
Identity = 88/314 (28.03%), Postives = 153/314 (48.73%), Query Frame = 0


Query: 16  AWNYSANRFATGLADGTLVIFDSPDPSSSSTSLTRTSSFKAHEAAIFKIVWVPPEYGDSV 75
           ++++   R AT  +D ++ ++D  D    +     T+S+K H  +++++ W  PE+G  +
Sbjct: 19  SYDFHGRRMATCSSDQSVKVWDKSDNGEWNC----TASWKTHSGSVWRVTWAHPEFGQVL 78

Query: 76  ACICSDGSASLWEEIVEDAQPLQ-----WKLCKRFKSNSSQILDIQSGNSSSGLKMIVAF 135
           A    D +A++WEEIV ++   Q     W        + + + D++      GL +    
Sbjct: 79  ASCSFDRTAAVWEEIVGESNDKQRGLSHWIKRTTLVDSRTSVTDVKFAPKHMGLMLTTCS 138

Query: 136 SDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFV 195
           +DG V++YE  D ++L  W LQ E       IS     SC    ISWNP    R  S  +
Sbjct: 139 ADGVVRIYEAPDVMNLSQWSLQHE-------ISCKLSCSC----ISWNP-SSSRAHSPMI 198

Query: 196 LAFNSDTPQLNSAKV--WEFDQAHQRWLPVAELALASDKGDEVYAVAWAQNIGRPHEVIA 255
              + D+    S KV  +E+ +  +++  V  L   +   D V+ +A+A N+GR   V+A
Sbjct: 199 AVGSDDSNTAYSGKVQIYEYVENTRKYAKVETLMTVT---DPVHDIAFAPNLGRSFHVLA 258

Query: 256 VATQKGIAIWRL-----GLNPGTDGRLSTERVALLSGHHGEVWEMEWDMGGMTLASTGKD 315
           +AT K + I++L       +     +L  +  A   GH+ +VW + W++    LAS+G D
Sbjct: 259 IAT-KDVRIFKLIPMRKESSSSGPTKLEVQLQAQFDGHNSQVWRVSWNITSTLLASSGDD 312

Query: 316 MMVRLWQSNLNGVW 318
             VRLW++N    W
Sbjct: 319 GCVRLWKANYMDNW 312

[Close]

BLAST of Lcy11g007880 vs. ExPASy Swiss-Prot
Match: Q6GNF1 (Nucleoporin SEH1-B OS=Xenopus laevis OX=8355 GN=seh1l-b PE=2 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.3e-30
Identity = 82/314 (26.11%), Postives = 150/314 (47.77%), Query Frame = 0


Query: 16  AWNYSANRFATGLADGTLVIFDSPDPSSSSTSLTRTSSFKAHEAAIFKIVWVPPEYGDSV 75
           ++++   R AT  +D ++ ++D     S + +   T+S+K H  +++++ W  PE+G  +
Sbjct: 19  SFDFHGRRMATCSSDQSVKVWD----KSENVNWHCTASWKTHSGSVWRVTWAHPEFGQVL 78

Query: 76  ACICSDGSASLWEEIVEDAQ-----PLQWKLCKRFKSNSSQILDIQSGNSSSGLKMIVAF 135
           A    D +A++WEEIV ++         W        + + + D++      GL +    
Sbjct: 79  ASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCS 138

Query: 136 SDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFV 195
           +DG V++YE  D ++L  W LQ E       IS     SC    ISWNP           
Sbjct: 139 ADGVVRIYEAPDVMNLSQWSLQHE-------ISCKLSCSC----ISWNPSSSRAHSPMIA 198

Query: 196 LAFNSDTPQ-LNSAKVWEFDQAHQRWLPVAELALASDKGDEVYAVAWAQNIGRPHEVIAV 255
           +  +  +P  +   +++E+++  +++     L   S   D V+ +A+A N+GR   ++AV
Sbjct: 199 VGSDDSSPNIMGKVQIYEYNENTRKYAKAETLMSVS---DPVHDIAFAPNLGRSFHILAV 258

Query: 256 ATQKGIAIWRLG------LNPGTDGRLSTERVALLSGHHGEVWEMEWDMGGMTLASTGKD 315
           AT K + I+ +        + G   +     VA    H+ +VW + W++ G  LAS+G D
Sbjct: 259 AT-KDVRIFTMKPLRKELSSSGGVTKFENHTVAQFDNHNSQVWRVSWNITGTVLASSGDD 313

Query: 316 MMVRLWQSNLNGVW 318
             VRLW++N    W
Sbjct: 319 GTVRLWKANYMDNW 313

[Close]

BLAST of Lcy11g007880 vs. ExPASy Swiss-Prot
Match: Q4FZW5 (Nucleoporin SEH1-A OS=Xenopus laevis OX=8355 GN=seh1l-a PE=2 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 5.1e-30
Identity = 82/314 (26.11%), Postives = 150/314 (47.77%), Query Frame = 0


Query: 16  AWNYSANRFATGLADGTLVIFDSPDPSSSSTSLTRTSSFKAHEAAIFKIVWVPPEYGDSV 75
           ++++   R AT  +D ++ ++D     S + +   T+S+K H  +++++ W  PE+G  +
Sbjct: 19  SFDFHGRRMATCSSDQSVKVWD----KSENGNWHCTASWKTHSGSVWRVTWAHPEFGQVL 78

Query: 76  ACICSDGSASLWEEIVEDAQ-----PLQWKLCKRFKSNSSQILDIQSGNSSSGLKMIVAF 135
           A    D +A++WEEIV ++         W        + + + D++      GL +    
Sbjct: 79  ASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCS 138

Query: 136 SDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFV 195
           +DG V++YE  D ++L  W LQ E       IS     SC    ISWNP           
Sbjct: 139 ADGVVRIYEAPDVMNLSQWSLQHE-------ISCKLSCSC----ISWNPSSSRAHSPMIA 198

Query: 196 LAFNSDTPQ-LNSAKVWEFDQAHQRWLPVAELALASDKGDEVYAVAWAQNIGRPHEVIAV 255
           +  +  +P  +   +++E+++  +++     L   S   D V+ +A+A N+GR   ++AV
Sbjct: 199 VGSDDSSPNIMGKVQIYEYNENTRKYAKAETLMSVS---DPVHDIAFAPNLGRSFHILAV 258

Query: 256 ATQKGIAIWRLG------LNPGTDGRLSTERVALLSGHHGEVWEMEWDMGGMTLASTGKD 315
           AT K + I+ +        + G   +     VA    H+ +VW + W++ G  LAS+G D
Sbjct: 259 AT-KDVRIFTMKPLRKELSSSGGVTKFEIHTVAQFDNHNSQVWRVSWNITGTVLASSGDD 313

Query: 316 MMVRLWQSNLNGVW 318
             VRLW++N    W
Sbjct: 319 GTVRLWKANYMDNW 313

[Close]

BLAST of Lcy11g007880 vs. ExPASy Swiss-Prot
Match: Q96EE3 (Nucleoporin SEH1 OS=Homo sapiens OX=9606 GN=SEH1L PE=1 SV=3)

HSP 1 Score: 132.9 bits (333), Expect = 6.7e-30
Identity = 82/314 (26.11%), Postives = 149/314 (47.45%), Query Frame = 0


Query: 16  AWNYSANRFATGLADGTLVIFDSPDPSSSSTSLTRTSSFKAHEAAIFKIVWVPPEYGDSV 75
           ++++   R AT  +D ++ ++D     S S     T+S+K H  +++++ W  PE+G  +
Sbjct: 19  SFDFHGRRMATCSSDQSVKVWD----KSESGDWHCTASWKTHSGSVWRVTWAHPEFGQVL 78

Query: 76  ACICSDGSASLWEEIVEDAQ-----PLQWKLCKRFKSNSSQILDIQSGNSSSGLKMIVAF 135
           A    D +A++WEEIV ++         W        + + + D++      GL +    
Sbjct: 79  ASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCS 138

Query: 136 SDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFV 195
           +DG V++YE  D ++L  W LQ E       IS     SC    ISWNP           
Sbjct: 139 ADGIVRIYEAPDVMNLSQWSLQHE-------ISCKLSCSC----ISWNPSSSRAHSPMIA 198

Query: 196 LAFNSDTPQ-LNSAKVWEFDQAHQRWLPVAELALASDKGDEVYAVAWAQNIGRPHEVIAV 255
           +  +  +P  +   +++E+++  +++     L   +   D V+ +A+A N+GR   ++A+
Sbjct: 199 VGSDDSSPNAMAKVQIFEYNENTRKYAKAETLMTVT---DPVHDIAFAPNLGRSFHILAI 258

Query: 256 ATQKGIAIWRLG------LNPGTDGRLSTERVALLSGHHGEVWEMEWDMGGMTLASTGKD 315
           AT K + I+ L        + G   +     VA    H+ +VW + W++ G  LAS+G D
Sbjct: 259 AT-KDVRIFTLKPVRKELTSSGGPTKFEIHIVAQFDNHNSQVWRVSWNITGTVLASSGDD 313

Query: 316 MMVRLWQSNLNGVW 318
             VRLW++N    W
Sbjct: 319 GCVRLWKANYMDNW 313

[Close]

BLAST of Lcy11g007880 vs. ExPASy TrEMBL
Match: A0A6J1FTY0 (protein SEH1 OS=Cucurbita moschata OX=3662 GN=LOC111447274 PE=3 SV=1)

HSP 1 Score: 614.0 bits (1582), Expect = 3.6e-172
Identity = 296/327 (90.52%), Postives = 313/327 (95.72%), Query Frame = 0


Query: 1   MEKAMATFDNGTVCSAWNYSANRFATGLADGTLVIFDSPDPSSSSTSLTRTSSFKAHEAA 60
           MEKAMATFD GTVCSAWNYSA+R  TG ADGT+VIFDS DPSSSSTSLTRTS+FKAHEAA
Sbjct: 1   MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKAHEAA 60

Query: 61  IFKIVWVPPEYGDSVACICSDGSASLWEEIVEDAQPLQWKLCKRFKSNSSQILDIQSGNS 120
           IFKIVWVPPEYGDS+ACICSDGS+SLWEE+VEDAQPLQWKL K FKSNSSQI+DIQ GNS
Sbjct: 61  IFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWKLSKHFKSNSSQIIDIQFGNS 120

Query: 121 SSGLKMIVAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPH 180
           SSGLKMI AFSDG++KVYELMDPLDLKSWQLQAEFQNVIDSISTVRKA+CLSASISWNP+
Sbjct: 121 SSGLKMIAAFSDGNLKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPN 180

Query: 181 RGERQQSSFVLAFNSDTPQLNSAKVWEFDQAHQRWLPVAELALASDKGDEVYAVAWAQNI 240
           RGERQQSSFVLAF SDTPQL+SAKVWEFDQAHQRWLPVAELAL +DKGD VYAVAWAQNI
Sbjct: 181 RGERQQSSFVLAFRSDTPQLDSAKVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNI 240

Query: 241 GRPHEVIAVATQKGIAIWRLGLNPGTDGRLSTERVALLSGHHGEVWEMEWDMGGMTLAST 300
           GRP+EVIAVATQKGIAIWRLGLNP +DGRLSTERVALLSGH+GEVW+MEWDMGGMTLAST
Sbjct: 241 GRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNGEVWDMEWDMGGMTLAST 300

Query: 301 GKDMMVRLWQSNLNGVWHQHAAFEPTS 328
           GKD MVRLWQSNLNGVWHQHAAFEPTS
Sbjct: 301 GKDGMVRLWQSNLNGVWHQHAAFEPTS 327

[Close]

BLAST of Lcy11g007880 vs. ExPASy TrEMBL
Match: A0A6J1J2X1 (protein SEH1 OS=Cucurbita maxima OX=3661 GN=LOC111480853 PE=3 SV=1)

HSP 1 Score: 611.7 bits (1576), Expect = 1.8e-171
Identity = 295/327 (90.21%), Postives = 312/327 (95.41%), Query Frame = 0


Query: 1   MEKAMATFDNGTVCSAWNYSANRFATGLADGTLVIFDSPDPSSSSTSLTRTSSFKAHEAA 60
           MEKAMATFD GTVCSAWNYSA+R  TG ADGT+V+FDS DPSSSSTSLTRTS+FKAHEAA
Sbjct: 1   MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVVFDSLDPSSSSTSLTRTSNFKAHEAA 60

Query: 61  IFKIVWVPPEYGDSVACICSDGSASLWEEIVEDAQPLQWKLCKRFKSNSSQILDIQSGNS 120
           IFKIVWVPPEYGDS+ACICSDGS+SLWEE+VEDAQPLQWKL K FKSNSSQILDIQ GNS
Sbjct: 61  IFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWKLSKHFKSNSSQILDIQFGNS 120

Query: 121 SSGLKMIVAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPH 180
           SSGLKMI AFSDG+VKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKA+CLSASISWNP+
Sbjct: 121 SSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPN 180

Query: 181 RGERQQSSFVLAFNSDTPQLNSAKVWEFDQAHQRWLPVAELALASDKGDEVYAVAWAQNI 240
           RGERQQSSFVLAF SDTPQL+SAKVWEFD+AHQRWLPVAELAL +DKGD VYAVAWAQNI
Sbjct: 181 RGERQQSSFVLAFRSDTPQLDSAKVWEFDRAHQRWLPVAELALEADKGDGVYAVAWAQNI 240

Query: 241 GRPHEVIAVATQKGIAIWRLGLNPGTDGRLSTERVALLSGHHGEVWEMEWDMGGMTLAST 300
           GRP+EVIAVATQKGIAIWRLGLNP +DGRLSTERVALLSGH+ EVW+MEWDMGGMTLAST
Sbjct: 241 GRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNSEVWDMEWDMGGMTLAST 300

Query: 301 GKDMMVRLWQSNLNGVWHQHAAFEPTS 328
           GKD MVRLWQSNLNGVWHQHAAFEPTS
Sbjct: 301 GKDGMVRLWQSNLNGVWHQHAAFEPTS 327

[Close]

BLAST of Lcy11g007880 vs. ExPASy TrEMBL
Match: A0A6J1C5X6 (protein SEH1 OS=Momordica charantia OX=3673 GN=LOC111008268 PE=3 SV=1)

HSP 1 Score: 608.2 bits (1567), Expect = 2.0e-170
Identity = 294/327 (89.91%), Postives = 308/327 (94.19%), Query Frame = 0


Query: 1   MEKAMATFDNGTVCSAWNYSANRFATGLADGTLVIFDSPDPSSSSTSLTRTSSFKAHEAA 60
           ME AMA+FD GT+CSAWNYSA+R AT   DGTLVIFDSPDPSSSSTSLTRTS+FKAHEAA
Sbjct: 1   MESAMASFDKGTLCSAWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAA 60

Query: 61  IFKIVWVPPEYGDSVACICSDGSASLWEEIVEDAQPLQWKLCKRFKSNSSQILDIQSGNS 120
           I KIVWVPPEYGDSVACICSDG++SLWEE+VEDAQPLQWKLCKRFKSNS+Q+LDIQ GNS
Sbjct: 61  ILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWKLCKRFKSNSAQMLDIQFGNS 120

Query: 121 SSGLKMIVAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPH 180
           SSGLKMI AFS  HVKVYELMDPLDLK+WQLQAEFQNVIDSISTVRKASCLSASISWNPH
Sbjct: 121 SSGLKMIAAFSHCHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPH 180

Query: 181 RGERQQSSFVLAFNSDTPQLNSAKVWEFDQAHQRWLPVAELALASDKGDEVYAVAWAQNI 240
           RGERQQSSFVLA NS+TPQLNSAKVWEFDQAHQRWLPVAELAL +DKGDEVYAVAWAQNI
Sbjct: 181 RGERQQSSFVLALNSNTPQLNSAKVWEFDQAHQRWLPVAELALPADKGDEVYAVAWAQNI 240

Query: 241 GRPHEVIAVATQKGIAIWRLGLNPGTDGRLSTERVALLSGHHGEVWEMEWDMGGMTLAST 300
           GRP+EVIAVATQKGIAIW LG NP  DGRLSTERVALLSGH+GEVWEMEWDMGGMTLAST
Sbjct: 241 GRPYEVIAVATQKGIAIWHLGSNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST 300

Query: 301 GKDMMVRLWQSNLNGVWHQHAAFEPTS 328
           GKD MVRLWQSNLNGVWHQ AAFEPTS
Sbjct: 301 GKDGMVRLWQSNLNGVWHQLAAFEPTS 327

[Close]

BLAST of Lcy11g007880 vs. ExPASy TrEMBL
Match: A0A1S3BTS7 (protein SEH1 OS=Cucumis melo OX=3656 GN=LOC103493086 PE=3 SV=1)

HSP 1 Score: 604.7 bits (1558), Expect = 2.2e-169
Identity = 291/327 (88.99%), Postives = 313/327 (95.72%), Query Frame = 0


Query: 1   MEKAMATFDNGTVCSAWNYSANRFATGLADGTLVIFDSPDPSSSSTSLTRTSSFKAHEAA 60
           MEKAMATFD GT+CSAWN+S++R AT  +DGTLVIFDSP PSSSSTSLTRTS+FKAHEAA
Sbjct: 1   MEKAMATFDKGTLCSAWNHSSSRLATASSDGTLVIFDSPHPSSSSTSLTRTSNFKAHEAA 60

Query: 61  IFKIVWVPPEYGDSVACICSDGSASLWEEIVEDAQPLQWKLCKRFKSNSSQILDIQSGNS 120
           I KIVWVPPEYGDSVACICSDG++SLWEE+VEDAQPL+WKLCK FKSNSSQILD+Q GNS
Sbjct: 61  ITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLEWKLCKLFKSNSSQILDLQFGNS 120

Query: 121 SSGLKMIVAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPH 180
           SSGLKMI AFSDG++KVYELMDPLDLKSWQLQAEFQNVIDSISTVRK+SC SASISWNPH
Sbjct: 121 SSGLKMIAAFSDGYIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKSSCSSASISWNPH 180

Query: 181 RGERQQSSFVLAFNSDTPQLNSAKVWEFDQAHQRWLPVAELALASDKGDEVYAVAWAQNI 240
           RGE QQSSFVLAF+S+TPQLNSAKVWEFDQAHQRWLPVAELAL ++KGDEVYAVAWAQNI
Sbjct: 181 RGE-QQSSFVLAFSSNTPQLNSAKVWEFDQAHQRWLPVAELALTAEKGDEVYAVAWAQNI 240

Query: 241 GRPHEVIAVATQKGIAIWRLGLNPGTDGRLSTERVALLSGHHGEVWEMEWDMGGMTLAST 300
           GRP+EVIAVATQ+GIAIWRLGL+P TDGRLSTERVALLSGH+GEVWEMEWDMGGMTLAST
Sbjct: 241 GRPYEVIAVATQRGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST 300

Query: 301 GKDMMVRLWQSNLNGVWHQHAAFEPTS 328
           GKD MVRLWQSNLNGVWHQHAAFEPTS
Sbjct: 301 GKDGMVRLWQSNLNGVWHQHAAFEPTS 326

[Close]

BLAST of Lcy11g007880 vs. ExPASy TrEMBL
Match: A0A0A0KWZ8 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G051460 PE=3 SV=1)

HSP 1 Score: 586.6 bits (1511), Expect = 6.2e-164
Identity = 282/327 (86.24%), Postives = 304/327 (92.97%), Query Frame = 0


Query: 1   MEKAMATFDNGTVCSAWNYSANRFATGLADGTLVIFDSPDPSSSSTSLTRTSSFKAHEAA 60
           MEKAMATF  GT+CSAWNYS+ R AT  +DGTLVIFDSP PSSSSTS T TS+FKAHE A
Sbjct: 1   MEKAMATFHKGTLCSAWNYSSTRLATASSDGTLVIFDSPHPSSSSTSFTPTSNFKAHEVA 60

Query: 61  IFKIVWVPPEYGDSVACICSDGSASLWEEIVEDAQPLQWKLCKRFKSNSSQILDIQSGNS 120
           I KIVWVPPEYGDSVACICSDG++SLWEE+VEDAQPLQWKLCK FKSNSSQILD+Q GNS
Sbjct: 61  ITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWKLCKLFKSNSSQILDLQFGNS 120

Query: 121 SSGLKMIVAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPH 180
           SSGLKMI AFSDG++KVYELMDPL+LK+WQLQAEFQNVIDSISTVRK+SC SASISWNPH
Sbjct: 121 SSGLKMIAAFSDGYIKVYELMDPLNLKNWQLQAEFQNVIDSISTVRKSSCSSASISWNPH 180

Query: 181 RGERQQSSFVLAFNSDTPQLNSAKVWEFDQAHQRWLPVAELALASDKGDEVYAVAWAQNI 240
           RGE QQSSFV+AF+S+TPQLNSAKVWEFDQAH RWLPVAELAL ++KGDEVYAVAWAQNI
Sbjct: 181 RGE-QQSSFVIAFSSNTPQLNSAKVWEFDQAHHRWLPVAELALTAEKGDEVYAVAWAQNI 240

Query: 241 GRPHEVIAVATQKGIAIWRLGLNPGTDGRLSTERVALLSGHHGEVWEMEWDMGGMTLAST 300
           GRP+EVIAVATQ+GIAIW LGL+P  DGRLS ERVALLSGH+GEVWEMEWDMGGMTLAST
Sbjct: 241 GRPYEVIAVATQRGIAIWHLGLSPDMDGRLSRERVALLSGHNGEVWEMEWDMGGMTLAST 300

Query: 301 GKDMMVRLWQSNLNGVWHQHAAFEPTS 328
           GKD MVRLWQSNLNGVWHQHAAFEPTS
Sbjct: 301 GKDGMVRLWQSNLNGVWHQHAAFEPTS 326

[Close]

BLAST of Lcy11g007880 vs. NCBI nr
Match: XP_023547085.1 (protein SEH1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 614.8 bits (1584), Expect = 4.4e-172
Identity = 297/327 (90.83%), Postives = 313/327 (95.72%), Query Frame = 0


Query: 1   MEKAMATFDNGTVCSAWNYSANRFATGLADGTLVIFDSPDPSSSSTSLTRTSSFKAHEAA 60
           MEKAMATFD GTVCSAWNYSA+R  TG ADGT+VIFDS DPSSSSTSLTRTS+FK HEAA
Sbjct: 1   MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKVHEAA 60

Query: 61  IFKIVWVPPEYGDSVACICSDGSASLWEEIVEDAQPLQWKLCKRFKSNSSQILDIQSGNS 120
           IFKIVWVPPEYGDS+ACICSDGS+SLWEE+VEDAQPLQWKL K FKSNSSQILDIQ GNS
Sbjct: 61  IFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWKLSKHFKSNSSQILDIQFGNS 120

Query: 121 SSGLKMIVAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPH 180
           SSGLKMI AFSDG+VKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKA+CLSASISWNP+
Sbjct: 121 SSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPN 180

Query: 181 RGERQQSSFVLAFNSDTPQLNSAKVWEFDQAHQRWLPVAELALASDKGDEVYAVAWAQNI 240
           RGERQQSSFVLAF+SDTPQL+SAKVWEFDQAHQRWLPVAELAL +DKGD VYAVAWAQNI
Sbjct: 181 RGERQQSSFVLAFHSDTPQLDSAKVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNI 240

Query: 241 GRPHEVIAVATQKGIAIWRLGLNPGTDGRLSTERVALLSGHHGEVWEMEWDMGGMTLAST 300
           GRP+EVIAVATQKGIAIWRLGLNP +DGRLSTERVALLSGH+GEVW+MEWDMGGMTLAST
Sbjct: 241 GRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNGEVWDMEWDMGGMTLAST 300

Query: 301 GKDMMVRLWQSNLNGVWHQHAAFEPTS 328
           GKD MVRLWQSNLNGVWHQHAAFEPTS
Sbjct: 301 GKDGMVRLWQSNLNGVWHQHAAFEPTS 327

[Close]

BLAST of Lcy11g007880 vs. NCBI nr
Match: KAG6600526.1 (Protein SEH1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 614.8 bits (1584), Expect = 4.4e-172
Identity = 296/327 (90.52%), Postives = 313/327 (95.72%), Query Frame = 0


Query: 1   MEKAMATFDNGTVCSAWNYSANRFATGLADGTLVIFDSPDPSSSSTSLTRTSSFKAHEAA 60
           MEKAMATFD GTVCSAWNYSA+R  TG ADGT+VIFDS DPSSSSTSLTRTS+FKAHEAA
Sbjct: 1   MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKAHEAA 60

Query: 61  IFKIVWVPPEYGDSVACICSDGSASLWEEIVEDAQPLQWKLCKRFKSNSSQILDIQSGNS 120
           IFKIVWVPPEYGDS+ACICSDGS+SLWEE+VEDAQPLQWKL K FKSNSSQI+DIQ GNS
Sbjct: 61  IFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWKLSKHFKSNSSQIIDIQFGNS 120

Query: 121 SSGLKMIVAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPH 180
           SSGLKMI AFSDG+VKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKA+CLSASISWNP+
Sbjct: 121 SSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPN 180

Query: 181 RGERQQSSFVLAFNSDTPQLNSAKVWEFDQAHQRWLPVAELALASDKGDEVYAVAWAQNI 240
           RGERQQSSFVLAF SDTPQL+SAKVWEFDQAHQRWLPVAELAL +DKGD VYAVAWAQNI
Sbjct: 181 RGERQQSSFVLAFRSDTPQLDSAKVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNI 240

Query: 241 GRPHEVIAVATQKGIAIWRLGLNPGTDGRLSTERVALLSGHHGEVWEMEWDMGGMTLAST 300
           GRP+EVIAVATQKG+AIWRLGLNP +DGRLSTERVALLSGH+GEVW+MEWDMGGMTLAST
Sbjct: 241 GRPYEVIAVATQKGVAIWRLGLNPDSDGRLSTERVALLSGHNGEVWDMEWDMGGMTLAST 300

Query: 301 GKDMMVRLWQSNLNGVWHQHAAFEPTS 328
           GKD MVRLWQSNLNGVWHQHAAFEPTS
Sbjct: 301 GKDGMVRLWQSNLNGVWHQHAAFEPTS 327

[Close]

BLAST of Lcy11g007880 vs. NCBI nr
Match: XP_022942103.1 (protein SEH1 [Cucurbita moschata])

HSP 1 Score: 614.0 bits (1582), Expect = 7.5e-172
Identity = 296/327 (90.52%), Postives = 313/327 (95.72%), Query Frame = 0


Query: 1   MEKAMATFDNGTVCSAWNYSANRFATGLADGTLVIFDSPDPSSSSTSLTRTSSFKAHEAA 60
           MEKAMATFD GTVCSAWNYSA+R  TG ADGT+VIFDS DPSSSSTSLTRTS+FKAHEAA
Sbjct: 1   MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKAHEAA 60

Query: 61  IFKIVWVPPEYGDSVACICSDGSASLWEEIVEDAQPLQWKLCKRFKSNSSQILDIQSGNS 120
           IFKIVWVPPEYGDS+ACICSDGS+SLWEE+VEDAQPLQWKL K FKSNSSQI+DIQ GNS
Sbjct: 61  IFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWKLSKHFKSNSSQIIDIQFGNS 120

Query: 121 SSGLKMIVAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPH 180
           SSGLKMI AFSDG++KVYELMDPLDLKSWQLQAEFQNVIDSISTVRKA+CLSASISWNP+
Sbjct: 121 SSGLKMIAAFSDGNLKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPN 180

Query: 181 RGERQQSSFVLAFNSDTPQLNSAKVWEFDQAHQRWLPVAELALASDKGDEVYAVAWAQNI 240
           RGERQQSSFVLAF SDTPQL+SAKVWEFDQAHQRWLPVAELAL +DKGD VYAVAWAQNI
Sbjct: 181 RGERQQSSFVLAFRSDTPQLDSAKVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNI 240

Query: 241 GRPHEVIAVATQKGIAIWRLGLNPGTDGRLSTERVALLSGHHGEVWEMEWDMGGMTLAST 300
           GRP+EVIAVATQKGIAIWRLGLNP +DGRLSTERVALLSGH+GEVW+MEWDMGGMTLAST
Sbjct: 241 GRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNGEVWDMEWDMGGMTLAST 300

Query: 301 GKDMMVRLWQSNLNGVWHQHAAFEPTS 328
           GKD MVRLWQSNLNGVWHQHAAFEPTS
Sbjct: 301 GKDGMVRLWQSNLNGVWHQHAAFEPTS 327

[Close]

BLAST of Lcy11g007880 vs. NCBI nr
Match: KAG7031165.1 (Protein SEH1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 613.6 bits (1581), Expect = 9.8e-172
Identity = 296/327 (90.52%), Postives = 312/327 (95.41%), Query Frame = 0


Query: 1   MEKAMATFDNGTVCSAWNYSANRFATGLADGTLVIFDSPDPSSSSTSLTRTSSFKAHEAA 60
           MEKAMATFD GTVCSAWNYSA+R  TG ADGT+VIFDS DPSSSSTSLTRTS+FKAHE A
Sbjct: 1   MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKAHETA 60

Query: 61  IFKIVWVPPEYGDSVACICSDGSASLWEEIVEDAQPLQWKLCKRFKSNSSQILDIQSGNS 120
           IFKIVWVPPEYGDS+ACICSDGS+SLWEE+VEDAQPLQWKL K FKSNSSQI+DIQ GNS
Sbjct: 61  IFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWKLSKHFKSNSSQIIDIQFGNS 120

Query: 121 SSGLKMIVAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPH 180
           SSGLKMI AFSDG+VKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKA+CLSASISWNP+
Sbjct: 121 SSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPN 180

Query: 181 RGERQQSSFVLAFNSDTPQLNSAKVWEFDQAHQRWLPVAELALASDKGDEVYAVAWAQNI 240
           RGERQQSSFVLAF SDTPQL+SAKVWEFDQAHQRWLPVAELAL +DKGD VYAVAWAQNI
Sbjct: 181 RGERQQSSFVLAFRSDTPQLDSAKVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNI 240

Query: 241 GRPHEVIAVATQKGIAIWRLGLNPGTDGRLSTERVALLSGHHGEVWEMEWDMGGMTLAST 300
           GRP+EVIAVATQKGIAIWRLGLNP +DGRLSTERVALLSGH+GEVW+MEWDMGGMTLAST
Sbjct: 241 GRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNGEVWDMEWDMGGMTLAST 300

Query: 301 GKDMMVRLWQSNLNGVWHQHAAFEPTS 328
           GKD MVRLWQSNLNGVWHQHAAFEPTS
Sbjct: 301 GKDGMVRLWQSNLNGVWHQHAAFEPTS 327

[Close]

BLAST of Lcy11g007880 vs. NCBI nr
Match: XP_022981824.1 (protein SEH1 [Cucurbita maxima])

HSP 1 Score: 611.7 bits (1576), Expect = 3.7e-171
Identity = 295/327 (90.21%), Postives = 312/327 (95.41%), Query Frame = 0


Query: 1   MEKAMATFDNGTVCSAWNYSANRFATGLADGTLVIFDSPDPSSSSTSLTRTSSFKAHEAA 60
           MEKAMATFD GTVCSAWNYSA+R  TG ADGT+V+FDS DPSSSSTSLTRTS+FKAHEAA
Sbjct: 1   MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVVFDSLDPSSSSTSLTRTSNFKAHEAA 60

Query: 61  IFKIVWVPPEYGDSVACICSDGSASLWEEIVEDAQPLQWKLCKRFKSNSSQILDIQSGNS 120
           IFKIVWVPPEYGDS+ACICSDGS+SLWEE+VEDAQPLQWKL K FKSNSSQILDIQ GNS
Sbjct: 61  IFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWKLSKHFKSNSSQILDIQFGNS 120

Query: 121 SSGLKMIVAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPH 180
           SSGLKMI AFSDG+VKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKA+CLSASISWNP+
Sbjct: 121 SSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPN 180

Query: 181 RGERQQSSFVLAFNSDTPQLNSAKVWEFDQAHQRWLPVAELALASDKGDEVYAVAWAQNI 240
           RGERQQSSFVLAF SDTPQL+SAKVWEFD+AHQRWLPVAELAL +DKGD VYAVAWAQNI
Sbjct: 181 RGERQQSSFVLAFRSDTPQLDSAKVWEFDRAHQRWLPVAELALEADKGDGVYAVAWAQNI 240

Query: 241 GRPHEVIAVATQKGIAIWRLGLNPGTDGRLSTERVALLSGHHGEVWEMEWDMGGMTLAST 300
           GRP+EVIAVATQKGIAIWRLGLNP +DGRLSTERVALLSGH+ EVW+MEWDMGGMTLAST
Sbjct: 241 GRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNSEVWDMEWDMGGMTLAST 300

Query: 301 GKDMMVRLWQSNLNGVWHQHAAFEPTS 328
           GKD MVRLWQSNLNGVWHQHAAFEPTS
Sbjct: 301 GKDGMVRLWQSNLNGVWHQHAAFEPTS 327

[Close]

BLAST of Lcy11g007880 vs. TAIR 10
Match: AT1G64350.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 448.0 bits (1151), Expect = 6.6e-126
Identity = 205/325 (63.08%), Postives = 259/325 (79.69%), Query Frame = 0


Query: 1   MEKAMATFDNGTVCSAWNYSANRFATGLADGTLVIFDSPDPSSSSTSLTRTSSFKAHEAA 60
           M K+MAT D+GT CS+WN S +R A G  +G L I++S   +SSS++ + TS  +  E++
Sbjct: 1   MAKSMATLDSGTTCSSWNQSGDRLAAGSLNGKLSIYES--STSSSSTFSCTSKVRVSESS 60

Query: 61  IFKIVWVPPEYGDSVACICSDGSASLWEEIVEDAQPLQWKLCKRFKSNSSQILDIQSGNS 120
           I KIVW+P EYGD+VAC+C DGS S+WEE+ EDA  L+WKLCK  K+ SSQ+LD+Q G S
Sbjct: 61  IVKIVWLPSEYGDAVACVCEDGSLSIWEELSEDAHGLEWKLCKSMKNKSSQVLDVQFGVS 120

Query: 121 SSGLKMIVAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPH 180
              LKM+ A+SDG+++V+EL++PL+LK+WQLQAEFQNVIDS+ST+ K S LSAS+SWNP 
Sbjct: 121 RKSLKMVAAYSDGYLRVFELLNPLELKNWQLQAEFQNVIDSLSTLGKPSSLSASVSWNPM 180

Query: 181 RGERQQSSFVLAFNSDTPQLNSAKVWEFDQAHQRWLPVAELALASDKGDEVYAVAWAQNI 240
           +GE Q+ SFVLAFNSD+P LNS+K+WEFD+AH RWL VAELAL  DKGD VYA++WA NI
Sbjct: 181 KGEEQEPSFVLAFNSDSPHLNSSKIWEFDEAHNRWLAVAELALPEDKGDPVYALSWAPNI 240

Query: 241 GRPHEVIAVATQKGIAIWRLGLNPGTDGRLSTERVALLSGHHGEVWEMEWDMGGMTLAST 300
           GRP+EV+AVAT KGI IW +GL P  +GRL  ++V+ LSGH GEVW+MEWDM GMTLAST
Sbjct: 241 GRPYEVVAVATHKGIGIWHVGLAPDLEGRLPVKKVSSLSGHQGEVWQMEWDMSGMTLAST 300

Query: 301 GKDMMVRLWQSNLNGVWHQHAAFEP 326
           G D MV+LWQSNLNG WH+ A  EP
Sbjct: 301 GSDGMVKLWQSNLNGEWHEQATLEP 323

The following BLAST results are available for this feature:

BLAST of Lcy11g007880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93VR9	9.3e-125	63.08	Protein SEH1 OS=Arabidopsis thaliana OX=3702 GN=SEH1 PE=1 SV=1	[more]
C1BK83	1.3e-30	28.03	Nucleoporin SEH1 OS=Osmerus mordax OX=8014 GN=seh1l PE=2 SV=1	[more]
Q6GNF1	2.3e-30	26.11	Nucleoporin SEH1-B OS=Xenopus laevis OX=8355 GN=seh1l-b PE=2 SV=1	[more]
Q4FZW5	5.1e-30	26.11	Nucleoporin SEH1-A OS=Xenopus laevis OX=8355 GN=seh1l-a PE=2 SV=1	[more]
Q96EE3	6.7e-30	26.11	Nucleoporin SEH1 OS=Homo sapiens OX=9606 GN=SEH1L PE=1 SV=3	[more]

BLAST of Lcy11g007880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FTY0	3.6e-172	90.52	protein SEH1 OS=Cucurbita moschata OX=3662 GN=LOC111447274 PE=3 SV=1	[more]
A0A6J1J2X1	1.8e-171	90.21	protein SEH1 OS=Cucurbita maxima OX=3661 GN=LOC111480853 PE=3 SV=1	[more]
A0A6J1C5X6	2.0e-170	89.91	protein SEH1 OS=Momordica charantia OX=3673 GN=LOC111008268 PE=3 SV=1	[more]
A0A1S3BTS7	2.2e-169	88.99	protein SEH1 OS=Cucumis melo OX=3656 GN=LOC103493086 PE=3 SV=1	[more]
A0A0A0KWZ8	6.2e-164	86.24	WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G...	[more]

BLAST of Lcy11g007880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023547085.1	4.4e-172	90.83	protein SEH1 [Cucurbita pepo subsp. pepo]	[more]
KAG6600526.1	4.4e-172	90.52	Protein SEH1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022942103.1	7.5e-172	90.52	protein SEH1 [Cucurbita moschata]	[more]
KAG7031165.1	9.8e-172	90.52	Protein SEH1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022981824.1	3.7e-171	90.21	protein SEH1 [Cucurbita maxima]	[more]

BLAST of Lcy11g007880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64350.1	6.6e-126	63.08	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 98..139 e-value: 6.8 score: 11.8 coord: 1..37 e-value: 5.6 score: 12.3 coord: 271..310 e-value: 2.7E-4 score: 30.3 coord: 47..88 e-value: 0.26 score: 20.4
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 278..309 e-value: 0.054 score: 14.4
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 278..310 score: 11.043142
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 9..324 e-value: 2.7E-45 score: 156.9
IPR037363	Sec13/Seh1 family	PANTHER	PTHR11024	NUCLEAR PORE COMPLEX PROTEIN SEC13 / SEH1 FAMILY MEMBER	coord: 1..326
IPR037597	Nucleoporin Seh1	PANTHER	PTHR11024:SF3	NUCLEOPORIN SEH1	coord: 1..326
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 278..310 score: 9.256512
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 13..311

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g007880.1	Lcy11g007880.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034198	cellular response to amino acid starvation
biological_process	GO:1904263	positive regulation of TORC1 signaling
biological_process	GO:0015031	protein transport
cellular_component	GO:0031080	nuclear pore outer ring
cellular_component	GO:0035859	Seh1-associated complex
molecular_function	GO:0005515	protein binding
molecular_function	GO:0005198	structural molecule activity