Lcy11g007300 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g007300
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Aquaporin NIP1.1, putative
Location	Chr11: 7482785 .. 7485518 (-)
RNA-Seq Expression	Lcy11g007300
Synteny	Lcy11g007300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTCAGGCTCAAATAATATTCGTCCAATTACGCCCACAGCCGCCGTCTCCGCCTGCTGCTCCTGCCTTCCACCACCACCAATGGACCCTAATCCAGCTCGCCAGGTAATTTAGGACAATGGCCATCGCGGCTGAATTTTCAAAATTTTGAAATATATATATTGTTTTTGTGTTGTTGATTTGGTGTAGGTTTTGGGAGAGATGGTGGGCAGTTTTTTGTTGATGATTTGCATCAGTGGGGTGGCGCGGCGAGCGGGCAGCTGATGGGCGGTCAGGTGGGTCTATTGGACTACGCCGCCGCCGCCGCCAGCTTCACGGTCGCCGTTTTGACGTTCTGCTTTGTTCCGATTTCCGGTGCTCATTTCAATCCTGCCATCACTCTTGCCTCTGCCATTTTTGGTCACTTTCCATGGTGGATGGGGCGTCGTCTGCTACTGCATAAGGCCAAATAATCGATTGCGGGAGAAGACCATCGAGAGATTAGGGTCAGGGTTAAACGATTTTTTATTTAATCTTATTAGTTTAGTTTTAAATTTTTACTTTTTAATTTATTTCCCAAGTAAGCAAATGAAGTAGCCTTGGTCATCATATCCACGTCAGCAAATAACAGTCCAGTCAGCATTCCATTAAGTCAAAGTTAAGTCATGGACCATTTAGAATGATTTTACAAACTTGAAGGACTAAAGTGTATCTTTTGAAATCTCAGGGACCAAATAGACATCAACTCCAAACCTCGGGGACCAAAAGTGCATTTTGCTCTTAGTTTTAAGATGAAACCTCATGTTATAGTCTATAAAGTCCAAACGAGTATTCAATCCAAAAAAAAAACAATAATGAAATTAGAGGTATAAAAAGAGATTTAAGTCAATCGATTTGTTTTTTTTTTTTACAATTAAAATTACCACTTCAATACTTATTTCATAAAAGATGTCATGTCGTCCATCTGGTAAGTTAAAGAGCAAGCATCAAAATGAGCACTCTCTAAAAGTAAATGGACTAAAATGAACGTTTTTAAAGTACATAGACAAAAATAAACATTTTTTCTGGTACGTGTAAAAATGTCTCCTTTTTTTCCCCGTAGAATTGAGACATATTATTATATTCGTATTTTGTCTAAGAAATAGGATGATATTTTTAAGGGAAAGCCATAGATAAATGAATACTGACTAAGAATATAAATTTCTTTAATTTTAGATATTTGCATACACATGTTATATTATATGAGCTACTTGAAGTTTGTTAAAAGTTAGTATTAAAAAAAATGTTAAATTACAAGTGTAGTCTATTAACTTTCAAGCTTATGAATTGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTTATGTCTATTTAATCCTTGAACTTAAAAAGTCCCTAATAGATCCTAAACTTTCCATTTTATGTTTAATGAATCTTTTAATTTCAATTGTGTAACTAATAGATCTTTGACCTATTCGACGATTTTAAAACTTACTAGACACAGTTTAAAGTTCAAAGACATATTAAATACAAAATAAAAAAAATTTATAAAGATATTAAAAGCTTTTTACTGTTCAAAAACCTTTTAGACCCAAAATCATAATTTAACAAGACTGAATTTAATTGACAAACTAGACAACTTGATTGACTGATTAAATCATTAATTTACTACTATATTTGATACCAATAAAAATGACTTATTAAAAAATGAGATTGAGAAATAAATAATTTTAAGAGAAATACTTAAACCAATTTTTTTCAAAAAGAGTTTTTAAGTATATAATAACTTGAGTATAAACACTTGTGAGAAAATGTAACAAAAAATATATGAGTGTCTAAATTCTAAATAATTTTTATACAAAATGTTTAAGAGAAAATGTATTCTTGACAAACACTTTAATTAAAATGTATTCCAAACTGGTCCTAAGTTTCGCACGACGAGAATCAATGGGTCCATTATTGGGCAAGGAGGGTACATATCAAGGCCCATAATAGAAGCAAAGCCCATTAGGCCCAAATTGGCCAAGGGAAAGCAAAACCCATTGTGACCAATTCCAAACTTTAGCTAATGGAGTATGGGAAGAGGAATTTTGAAGGTTCTTTTTGAGAAAGCAATTCCAAGGAGTGGTCATCATAAGAGTAAAAGGACAAATTCATCCCATTTCTTGAGAATCTTCATTGGGATGAAGGAAATGGATAGCCCCTCTCTTTTCACCTATAAATAAATTCAAAACCAACCAAATTCCATTCTTCATCACATCTTCACTTATTACCTTTATTTGGAGAAAGATATGGCCACTGCATTTGTGAGAGGAGCTCAGACAATGAACTCCATGTTCTTCAAGTAAGACCCTTCTTCAATTCAGCCATGGACTATTTTCTCCTGTTTTATGAATCTGTTTTTCTACAAGAAAAATATCTTTTAGATCATGAGAGAATTGCTAAGGGTTTACTTATGTTTTTTTTTCATTGTGATCTTGTCCTTGATCTACAATAGGAATGCAATCCGAAACAAAAATGAAAAAAGCAATGTAACGGACTCGGTTGAATCCCTTTGAGGTATAATGGTTGGTCGGTCCAATTTTCTGAAGTATAGAATAGAAAAATAGTTGATTAGTTCGATTGGGATAAATTATGTCCGTTTCAGTGGGTTTTGTTTGATTAGGGTCATTTTGATGGTTGATTTTGTTGCATCTAGTTGCTTTGGTTAGTGTTTTCAAAGCGCAAGACGCACTCTAA

mRNA sequence

ATGGCCTCAGGCTCAAATAATATTCGTCCAATTACGCCCACAGCCGCCGTCTCCGCCTGCTGCTCCTGCCTTCCACCACCACCAATGGACCCTAATCCAGCTCGCCAGTGGGGTGGCGCGGCGAGCGGGCAGCTGATGGGCGGTCAGGTGGGTCTATTGGACTACGCCGCCGCCGCCGCCAGCTTCACGGTCGCCGTTTTGACGTTCTGCTTTGTTCCGATTTCCGGTGCTCATTTCAATCCTGCCATCACTCTTGCCTCTGCCATTTTTGTTGCTTTGGTTAGTGTTTTCAAAGCGCAAGACGCACTCTAA

Coding sequence (CDS)

ATGGCCTCAGGCTCAAATAATATTCGTCCAATTACGCCCACAGCCGCCGTCTCCGCCTGCTGCTCCTGCCTTCCACCACCACCAATGGACCCTAATCCAGCTCGCCAGTGGGGTGGCGCGGCGAGCGGGCAGCTGATGGGCGGTCAGGTGGGTCTATTGGACTACGCCGCCGCCGCCGCCAGCTTCACGGTCGCCGTTTTGACGTTCTGCTTTGTTCCGATTTCCGGTGCTCATTTCAATCCTGCCATCACTCTTGCCTCTGCCATTTTTGTTGCTTTGGTTAGTGTTTTCAAAGCGCAAGACGCACTCTAA

Protein sequence

MASGSNNIRPITPTAAVSACCSCLPPPPMDPNPARQWGGAASGQLMGGQVGLLDYAAAAASFTVAVLTFCFVPISGAHFNPAITLASAIFVALVSVFKAQDAL

Homology

[Close]

BLAST of Lcy11g007300 vs. ExPASy Swiss-Prot
Match: Q8LAI1 (Probable aquaporin NIP7-1 OS=Arabidopsis thaliana OX=3702 GN=NIP7-1 PE=2 SV=2)

HSP 1 Score: 45.8 bits (107), Expect = 3.4e-04
Identity = 27/53 (50.94%), Postives = 35/53 (66.04%), Query Frame = 0


Query: 38  GGAASGQLMGGQVGLLDYAAAAASFTVAVLTFCFVPISGAHFNPAITLASAIF 91
           G  +S QL GG VGLL+Y A  A  +V V+ +    ISGAH NP+IT+A A+F
Sbjct: 64  GVISSTQLSGGHVGLLEY-AVTAGLSVVVVVYSIGHISGAHLNPSITIAFAVF 115

[Close]

BLAST of Lcy11g007300 vs. ExPASy TrEMBL
Match: A0A6J1IR00 (probable aquaporin NIP7-1 OS=Cucurbita maxima OX=3661 GN=LOC111479196 PE=3 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.7e-14
Identity = 59/102 (57.84%), Postives = 63/102 (61.76%), Query Frame = 0


Query: 5   SNNIRPITPTAAVSACCSCLPPPP-MDPNPARQ---------------WGGAASGQLMGG 64
           SNN  PI    + +    C P P  MD NPAR                 G AA+GQ+MGG
Sbjct: 3   SNNTNPIPTAVSGNNGLLCSPQPTIMDHNPARPVLGEMMGTFLLMICVSGVAATGQMMGG 62

Query: 65  QVGLLDYAAAAASFTVAVLTFCFVPISGAHFNPAITLASAIF 91
           QVGLLDY AAAA  TV VLTFCF PISGAHFNPAITLASAIF
Sbjct: 63  QVGLLDY-AAAAGLTVGVLTFCFAPISGAHFNPAITLASAIF 103

[Close]

BLAST of Lcy11g007300 vs. ExPASy TrEMBL
Match: A0A6J1GVJ7 (probable aquaporin NIP7-1 OS=Cucurbita moschata OX=3662 GN=LOC111457868 PE=3 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.7e-14
Identity = 59/102 (57.84%), Postives = 63/102 (61.76%), Query Frame = 0


Query: 5   SNNIRPITPTAAVSACCSCLPPPP-MDPNPARQ---------------WGGAASGQLMGG 64
           SNN  PI    + +    C P P  MD NPAR                 G AA+GQ+MGG
Sbjct: 3   SNNTNPIPTAVSDNNGLLCSPQPTIMDHNPARPVLGEMMGTFLLMICVSGVAATGQMMGG 62

Query: 65  QVGLLDYAAAAASFTVAVLTFCFVPISGAHFNPAITLASAIF 91
           QVGLLDY AAAA  TV VLTFCF PISGAHFNPAITLASAIF
Sbjct: 63  QVGLLDY-AAAAGLTVGVLTFCFAPISGAHFNPAITLASAIF 103

[Close]

BLAST of Lcy11g007300 vs. ExPASy TrEMBL
Match: A0A5A7U237 (Putative aquaporin NIP7-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G006350 PE=3 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 4.7e-09
Identity = 52/105 (49.52%), Postives = 58/105 (55.24%), Query Frame = 0


Query: 1  MASGSNNIRPITPTAAVSACCSCLPPPPMDPNPARQ---------------WGGAASGQL 60
          MAS +NN      T  V+   +   P  MD N  R                 G  A+GQL
Sbjct: 1  MASNNNN-----NTIPVTVSATFPRPTTMDDNLVRPVLGEMVGSFLLIVCLSGVTATGQL 60

Query: 61 MGGQVGLLDYAAAAASFTVAVLTFCFVPISGAHFNPAITLASAIF 91
           G Q+G+LDY A AA  TV VLTFCF PISGAHFNPAITLASAIF
Sbjct: 61 TGSQMGVLDY-AIAAGLTVGVLTFCFAPISGAHFNPAITLASAIF 99

[Close]

BLAST of Lcy11g007300 vs. ExPASy TrEMBL
Match: A0A1S3AX29 (probable aquaporin NIP7-1 OS=Cucumis melo OX=3656 GN=LOC103483738 PE=3 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 4.7e-09
Identity = 52/105 (49.52%), Postives = 58/105 (55.24%), Query Frame = 0


Query: 1  MASGSNNIRPITPTAAVSACCSCLPPPPMDPNPARQ---------------WGGAASGQL 60
          MAS +NN      T  V+   +   P  MD N  R                 G  A+GQL
Sbjct: 1  MASNNNN-----NTIPVTVSATFPRPTTMDDNLVRPVLGEMVGSFLLIVCVSGVTATGQL 60

Query: 61 MGGQVGLLDYAAAAASFTVAVLTFCFVPISGAHFNPAITLASAIF 91
           G Q+G+LDY A AA  TV VLTFCF PISGAHFNPAITLASAIF
Sbjct: 61 TGSQMGVLDY-AIAAGLTVGVLTFCFAPISGAHFNPAITLASAIF 99

[Close]

BLAST of Lcy11g007300 vs. ExPASy TrEMBL
Match: A0A0A0LAF0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G149960 PE=3 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 1.1e-08
Identity = 51/104 (49.04%), Postives = 57/104 (54.81%), Query Frame = 0


Query: 1  MASGSNNIRPITPTAAVSACCSCLPPPPMDPNPARQ---------------WGGAASGQL 60
          MAS +NN      T  V+   +   P  MD N  R                 G  A+GQL
Sbjct: 1  MASNNNN-----NTIPVTVSATFPQPTTMDHNLVRPVLGEMVGSFLLILCVSGVTATGQL 60

Query: 61 MGGQVGLLDYAAAAASFTVAVLTFCFVPISGAHFNPAITLASAI 90
           G Q+G+LDY A AA  TV VLTFCF PISGAHFNPAITLASAI
Sbjct: 61 TGSQMGILDY-AVAAGLTVGVLTFCFAPISGAHFNPAITLASAI 98

[Close]

BLAST of Lcy11g007300 vs. NCBI nr
Match: XP_022956061.1 (probable aquaporin NIP7-1 [Cucurbita moschata])

HSP 1 Score: 88.6 bits (218), Expect = 3.5e-14
Identity = 59/102 (57.84%), Postives = 63/102 (61.76%), Query Frame = 0


Query: 5   SNNIRPITPTAAVSACCSCLPPPP-MDPNPARQ---------------WGGAASGQLMGG 64
           SNN  PI    + +    C P P  MD NPAR                 G AA+GQ+MGG
Sbjct: 3   SNNTNPIPTAVSDNNGLLCSPQPTIMDHNPARPVLGEMMGTFLLMICVSGVAATGQMMGG 62

Query: 65  QVGLLDYAAAAASFTVAVLTFCFVPISGAHFNPAITLASAIF 91
           QVGLLDY AAAA  TV VLTFCF PISGAHFNPAITLASAIF
Sbjct: 63  QVGLLDY-AAAAGLTVGVLTFCFAPISGAHFNPAITLASAIF 103

[Close]

BLAST of Lcy11g007300 vs. NCBI nr
Match: XP_022979516.1 (probable aquaporin NIP7-1 [Cucurbita maxima])

HSP 1 Score: 88.6 bits (218), Expect = 3.5e-14
Identity = 59/102 (57.84%), Postives = 63/102 (61.76%), Query Frame = 0


Query: 5   SNNIRPITPTAAVSACCSCLPPPP-MDPNPARQ---------------WGGAASGQLMGG 64
           SNN  PI    + +    C P P  MD NPAR                 G AA+GQ+MGG
Sbjct: 3   SNNTNPIPTAVSGNNGLLCSPQPTIMDHNPARPVLGEMMGTFLLMICVSGVAATGQMMGG 62

Query: 65  QVGLLDYAAAAASFTVAVLTFCFVPISGAHFNPAITLASAIF 91
           QVGLLDY AAAA  TV VLTFCF PISGAHFNPAITLASAIF
Sbjct: 63  QVGLLDY-AAAAGLTVGVLTFCFAPISGAHFNPAITLASAIF 103

[Close]

BLAST of Lcy11g007300 vs. NCBI nr
Match: KAG7018680.1 (putative aquaporin NIP7-1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 88.6 bits (218), Expect = 3.5e-14
Identity = 59/102 (57.84%), Postives = 63/102 (61.76%), Query Frame = 0


Query: 5   SNNIRPITPTAAVSACCSCLPPPP-MDPNPARQ---------------WGGAASGQLMGG 64
           SNN  PI    + +    C P P  MD NPAR                 G AA+GQ+MGG
Sbjct: 3   SNNTNPIPTAVSDNNGLLCSPQPTIMDHNPARPVLGEMMGTFLLMICVSGVAATGQMMGG 62

Query: 65  QVGLLDYAAAAASFTVAVLTFCFVPISGAHFNPAITLASAIF 91
           QVGLLDY AAAA  TV VLTFCF PISGAHFNPAITLASAIF
Sbjct: 63  QVGLLDY-AAAAGLTVGVLTFCFAPISGAHFNPAITLASAIF 103

[Close]

BLAST of Lcy11g007300 vs. NCBI nr
Match: XP_023528366.1 (probable aquaporin NIP7-1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 88.6 bits (218), Expect = 3.5e-14
Identity = 59/102 (57.84%), Postives = 63/102 (61.76%), Query Frame = 0


Query: 5   SNNIRPITPTAAVSACCSCLPPPP-MDPNPARQ---------------WGGAASGQLMGG 64
           SNN  PI    + +    C P P  MD NPAR                 G AA+GQ+MGG
Sbjct: 3   SNNTNPIPTAVSDNNGLLCSPQPTIMDHNPARPVLGEMMGTFLLMICVSGVAATGQMMGG 62

Query: 65  QVGLLDYAAAAASFTVAVLTFCFVPISGAHFNPAITLASAIF 91
           QVGLLDY AAAA  TV VLTFCF PISGAHFNPAITLASAIF
Sbjct: 63  QVGLLDY-AAAAGLTVGVLTFCFAPISGAHFNPAITLASAIF 103

[Close]

BLAST of Lcy11g007300 vs. NCBI nr
Match: KAG6582276.1 (putative aquaporin NIP7-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 88.6 bits (218), Expect = 3.5e-14
Identity = 59/102 (57.84%), Postives = 63/102 (61.76%), Query Frame = 0


Query: 5   SNNIRPITPTAAVSACCSCLPPPP-MDPNPARQ---------------WGGAASGQLMGG 64
           SNN  PI    + +    C P P  MD NPAR                 G AA+GQ+MGG
Sbjct: 3   SNNTNPIPTAVSDNNGLLCSPQPTIMDHNPARPVLGEMMGTFLLMICVSGVAATGQMMGG 62

Query: 65  QVGLLDYAAAAASFTVAVLTFCFVPISGAHFNPAITLASAIF 91
           QVGLLDY AAAA  TV VLTFCF PISGAHFNPAITLASAIF
Sbjct: 63  QVGLLDY-AAAAGLTVGVLTFCFAPISGAHFNPAITLASAIF 103

[Close]

BLAST of Lcy11g007300 vs. TAIR 10
Match: AT3G06100.1 (NOD26-like intrinsic protein 7;1 )

HSP 1 Score: 45.8 bits (107), Expect = 2.4e-05
Identity = 27/53 (50.94%), Postives = 35/53 (66.04%), Query Frame = 0


Query: 38  GGAASGQLMGGQVGLLDYAAAAASFTVAVLTFCFVPISGAHFNPAITLASAIF 91
           G  +S QL GG VGLL+Y A  A  +V V+ +    ISGAH NP+IT+A A+F
Sbjct: 64  GVISSTQLSGGHVGLLEY-AVTAGLSVVVVVYSIGHISGAHLNPSITIAFAVF 115

The following BLAST results are available for this feature:

BLAST of Lcy11g007300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LAI1	3.4e-04	50.94	Probable aquaporin NIP7-1 OS=Arabidopsis thaliana OX=3702 GN=NIP7-1 PE=2 SV=2	[more]

BLAST of Lcy11g007300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IR00	1.7e-14	57.84	probable aquaporin NIP7-1 OS=Cucurbita maxima OX=3661 GN=LOC111479196 PE=3 SV=1	[more]
A0A6J1GVJ7	1.7e-14	57.84	probable aquaporin NIP7-1 OS=Cucurbita moschata OX=3662 GN=LOC111457868 PE=3 SV=...	[more]
A0A5A7U237	4.7e-09	49.52	Putative aquaporin NIP7-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A1S3AX29	4.7e-09	49.52	probable aquaporin NIP7-1 OS=Cucumis melo OX=3656 GN=LOC103483738 PE=3 SV=1	[more]
A0A0A0LAF0	1.1e-08	49.04	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G149960 PE=3 SV=1	[more]

BLAST of Lcy11g007300 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022956061.1	3.5e-14	57.84	probable aquaporin NIP7-1 [Cucurbita moschata]	[more]
XP_022979516.1	3.5e-14	57.84	probable aquaporin NIP7-1 [Cucurbita maxima]	[more]
KAG7018680.1	3.5e-14	57.84	putative aquaporin NIP7-1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023528366.1	3.5e-14	57.84	probable aquaporin NIP7-1 [Cucurbita pepo subsp. pepo]	[more]
KAG6582276.1	3.5e-14	57.84	putative aquaporin NIP7-1, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Lcy11g007300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G06100.1	2.4e-05	50.94	NOD26-like intrinsic protein 7;1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000425	Major intrinsic protein	PFAM	PF00230	MIP	coord: 52..92 e-value: 1.1E-8 score: 35.0
IPR023271	Aquaporin-like	GENE3D	1.20.1080.10	Glycerol uptake facilitator protein.	coord: 34..99 e-value: 1.0E-8 score: 36.6
IPR023271	Aquaporin-like	SUPERFAMILY	81338	Aquaporin-like	coord: 47..90
IPR022357	Major intrinsic protein, conserved site	PROSITE	PS00221	MIP	coord: 78..86

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g007300.1	Lcy11g007300.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0015267	channel activity