Lcy11g006950 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g006950
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	60S ribosomal protein L27
Location	Chr11: 7063313 .. 7064051 (+)
RNA-Seq Expression	Lcy11g006950
Synteny	Lcy11g006950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTGGAGCCGACGAGAAGGGGGAAAACACAGAGAGGAGGAGAAATCCGAAAATGGTGAAGTTCCTCAAGCAGAACAAAGCCGTCATCGTCCTTCAAGGCCGTTACGCCGGCCGGAAGGCGGTCATCATTCGCGCCTTCGACGACGGAACTCGGGATCGGGCTTATGGCCACTGCTTGGTCGCCGGAATCAAGAAGTACCCAGCCAAGGTCATCCGCAAGGACTCTTCTAAGAAGACTGCTAAGAAATCCAGAGTCAAGGCCTTCATCAAGCTCGTCAATTACAGGCATCTAATGCCCACCAGGTACACTCTCGATGTGGATCTCAAGGACGTCGTCACCGTCGATTGCTTGCAGTCAAAGGACAAGAAGGTTACGGCCGCTAAGGAGACCAAGAAGAGGTTCGAGGAGAGGTTCAAGACCGGGAAGAACAGGTGGTTTTTCACCAAGCTCAGGTTCTGAAGAGTCTTATCTAGTCTTGTTATGTTGTGGGTTTACTCTGGATTTTCAAGTAATCGGACTTCTTTTTATATAAATACAGTAGTTTATTTGATCTTACATTTTTGGTTGAACGTACTCTAGTCGTTTGGATGAGAAATTTTCTGGGTTTGTAATGCTACATTTGCCTTAGTTATTCTTATATGTCAAATTAATTTTGTCCCAATGTCTGGTTCTTTGGTAATGCTGCTATCTTAATTTTGAGTTTTTGTTTCTTTGATATCAGTTTGTTACTATTTTGCTA

mRNA sequence

GTTGGAGCCGACGAGAAGGGGGAAAACACAGAGAGGAGGAGAAATCCGAAAATGGTGAAGTTCCTCAAGCAGAACAAAGCCGTCATCGTCCTTCAAGGCCGTTACGCCGGCCGGAAGGCGGTCATCATTCGCGCCTTCGACGACGGAACTCGGGATCGGGCTTATGGCCACTGCTTGGTCGCCGGAATCAAGAAGTACCCAGCCAAGGTCATCCGCAAGGACTCTTCTAAGAAGACTGCTAAGAAATCCAGAGTCAAGGCCTTCATCAAGCTCGTCAATTACAGGCATCTAATGCCCACCAGGTACACTCTCGATGTGGATCTCAAGGACGTCGTCACCGTCGATTGCTTGCAGTCAAAGGACAAGAAGGTTACGGCCGCTAAGGAGACCAAGAAGAGGTTCGAGGAGAGGTTCAAGACCGGGAAGAACAGGTGGTTTTTCACCAAGCTCAGGTTCTGAAGAGTCTTATCTAGTCTTGTTATGTTGTGGGTTTACTCTGGATTTTCAAGTAATCGGACTTCTTTTTATATAAATACAGTAGTTTATTTGATCTTACATTTTTGGTTGAACGTACTCTAGTCGTTTGGATGAGAAATTTTCTGGGTTTGTAATGCTACATTTGCCTTAGTTATTCTTATATGTCAAATTAATTTTGTCCCAATGTCTGGTTCTTTGGTAATGCTGCTATCTTAATTTTGAGTTTTTGTTTCTTTGATATCAGTTTGTTACTATTTTGCTA

Coding sequence (CDS)

ATGGTGAAGTTCCTCAAGCAGAACAAAGCCGTCATCGTCCTTCAAGGCCGTTACGCCGGCCGGAAGGCGGTCATCATTCGCGCCTTCGACGACGGAACTCGGGATCGGGCTTATGGCCACTGCTTGGTCGCCGGAATCAAGAAGTACCCAGCCAAGGTCATCCGCAAGGACTCTTCTAAGAAGACTGCTAAGAAATCCAGAGTCAAGGCCTTCATCAAGCTCGTCAATTACAGGCATCTAATGCCCACCAGGTACACTCTCGATGTGGATCTCAAGGACGTCGTCACCGTCGATTGCTTGCAGTCAAAGGACAAGAAGGTTACGGCCGCTAAGGAGACCAAGAAGAGGTTCGAGGAGAGGTTCAAGACCGGGAAGAACAGGTGGTTTTTCACCAAGCTCAGGTTCTGA

Protein sequence

MVKFLKQNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSSKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVDCLQSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF

Homology

[Close]

BLAST of Lcy11g006950 vs. ExPASy Swiss-Prot
Match: Q8LCL3 (60S ribosomal protein L27-2 OS=Arabidopsis thaliana OX=3702 GN=RPL27B PE=2 SV=2)

HSP 1 Score: 229.6 bits (584), Expect = 2.2e-59
Identity = 114/135 (84.44%), Postives = 126/135 (93.33%), Query Frame = 0


Query: 1   MVKFLKQNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSSK 60
           MVKFLKQNKAVI+LQGRYAG+KAVII++FDDGT DR YGHCLVAG+KKYP+KVIRKDS+K
Sbjct: 1   MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGTSDRRYGHCLVAGLKKYPSKVIRKDSAK 60

Query: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVDCLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVK FIKLVNY+HLMPTRYTLDVDLK+V T+D L+SKDKKVTA KE K + EER
Sbjct: 61  KTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALKSKDKKVTALKEAKAKLEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Lcy11g006950 vs. ExPASy Swiss-Prot
Match: P51419 (60S ribosomal protein L27-3 OS=Arabidopsis thaliana OX=3702 GN=RPL27C PE=2 SV=2)

HSP 1 Score: 229.6 bits (584), Expect = 2.2e-59
Identity = 114/135 (84.44%), Postives = 125/135 (92.59%), Query Frame = 0


Query: 1   MVKFLKQNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSSK 60
           MVKFLKQNKAVI+LQGRYAG+KAVII++FDDG RDR YGHCLVAG+KKYP+KVIRKDS+K
Sbjct: 1   MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGNRDRPYGHCLVAGLKKYPSKVIRKDSAK 60

Query: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVDCLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVK FIKLVNY+HLMPTRYTLDVDLK+V T+D LQSKDKKV A KE K + EER
Sbjct: 61  KTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALQSKDKKVAALKEAKAKLEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Lcy11g006950 vs. ExPASy Swiss-Prot
Match: Q05462 (60S ribosomal protein L27 OS=Pisum sativum OX=3888 GN=RPL27 PE=2 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 6.3e-59
Identity = 113/135 (83.70%), Postives = 125/135 (92.59%), Query Frame = 0


Query: 1   MVKFLKQNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSSK 60
           MVKFLK NKAVI+LQGRYAG+KAVI++ FDDGTR++ YGHCLVAGIKK+P+KVI+KDS+K
Sbjct: 1   MVKFLKPNKAVILLQGRYAGKKAVIVKTFDDGTREKPYGHCLVAGIKKFPSKVIKKDSAK 60

Query: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVDCLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVKAF+KLVNY+HLMPTRYTLDVDLKD V  D LQSKDKKVTA KETKK  EER
Sbjct: 61  KTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALKETKKSLEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Lcy11g006950 vs. ExPASy Swiss-Prot
Match: Q9SKX8 (60S ribosomal protein L27-1 OS=Arabidopsis thaliana OX=3702 GN=RPL27A PE=2 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 1.0e-53
Identity = 101/135 (74.81%), Postives = 121/135 (89.63%), Query Frame = 0


Query: 1   MVKFLKQNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSSK 60
           MVK +K  KAVI+LQGRY G+KAVI+++FDDGT ++ YGHCLVAG+KKYP+KVIRKDS+K
Sbjct: 1   MVKCMKPGKAVILLQGRYTGKKAVIVKSFDDGTVEKKYGHCLVAGLKKYPSKVIRKDSAK 60

Query: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVDCLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVK F K++NY+H+MPTRYTLD+DLK+VV+ D + SKDKKVTA KE K +FEER
Sbjct: 61  KTAKKSRVKCFFKVINYQHVMPTRYTLDLDLKNVVSADAISSKDKKVTALKEAKAKFEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Lcy11g006950 vs. ExPASy Swiss-Prot
Match: P41101 (60S ribosomal protein L27 OS=Solanum tuberosum OX=4113 GN=RPL27 PE=2 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 2.6e-52
Identity = 108/139 (77.70%), Postives = 118/139 (84.89%), Query Frame = 0


Query: 1   MVKFLKQNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSSK 60
           M KFLK NKAVI+LQG+YAGRKAVI+RAFD+GTRDR YGHCLVAGI +YP KVIRKDS+K
Sbjct: 1   MEKFLKPNKAVILLQGKYAGRKAVIVRAFDEGTRDRPYGHCLVAGISRYPKKVIRKDSAK 60

Query: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDL----KDVVTVDCLQSKDKKVTAAKETKKR 120
           K  KKSRVKAFIKLVNY H+MPTRYTLD DL    KDVV  D LQ++DKKVT A+ TK R
Sbjct: 61  KAGKKSRVKAFIKLVNYNHIMPTRYTLDEDLKDVVKDVVNADVLQARDKKVT-ARRTKAR 120

Query: 121 FEERFKTGKNRWFFTKLRF 136
             ERFKTGKNRWFFTKLRF
Sbjct: 121 LAERFKTGKNRWFFTKLRF 138

[Close]

BLAST of Lcy11g006950 vs. ExPASy TrEMBL
Match: A0A6J1JA75 (60S ribosomal protein L27 OS=Cucurbita maxima OX=3661 GN=LOC111483122 PE=3 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 9.4e-66
Identity = 133/135 (98.52%), Postives = 134/135 (99.26%), Query Frame = 0


Query: 1   MVKFLKQNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSSK 60
           MVKFLKQNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSSK
Sbjct: 1   MVKFLKQNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSSK 60

Query: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVDCLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVT+D LQSKDKKVTAAKETKKRFEER
Sbjct: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Lcy11g006950 vs. ExPASy TrEMBL
Match: A0A6J1EZ01 (60S ribosomal protein L27 OS=Cucurbita moschata OX=3662 GN=LOC111437692 PE=3 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 9.4e-66
Identity = 133/135 (98.52%), Postives = 134/135 (99.26%), Query Frame = 0


Query: 1   MVKFLKQNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSSK 60
           MVKFLKQNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSSK
Sbjct: 1   MVKFLKQNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSSK 60

Query: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVDCLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVT+D LQSKDKKVTAAKETKKRFEER
Sbjct: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Lcy11g006950 vs. ExPASy TrEMBL
Match: A0A6J1EZ07 (60S ribosomal protein L27 OS=Cucurbita moschata OX=3662 GN=LOC111437697 PE=3 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.2e-65
Identity = 132/135 (97.78%), Postives = 134/135 (99.26%), Query Frame = 0


Query: 1   MVKFLKQNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSSK 60
           MVKFLKQNKAVI+LQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSSK
Sbjct: 1   MVKFLKQNKAVIILQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSSK 60

Query: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVDCLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVT+D LQSKDKKVTAAKETKKRFEER
Sbjct: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Lcy11g006950 vs. ExPASy TrEMBL
Match: A0A6J1JC92 (60S ribosomal protein L27 OS=Cucurbita maxima OX=3661 GN=LOC111483151 PE=3 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 2.1e-65
Identity = 131/135 (97.04%), Postives = 134/135 (99.26%), Query Frame = 0


Query: 1   MVKFLKQNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSSK 60
           MVKFLKQNKAVI+LQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSSK
Sbjct: 1   MVKFLKQNKAVIILQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSSK 60

Query: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVDCLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVKAFIK+VNYRHLMPTRYTLDVDLKDVVT+D LQSKDKKVTAAKETKKRFEER
Sbjct: 61  KTAKKSRVKAFIKIVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Lcy11g006950 vs. ExPASy TrEMBL
Match: A0A6J1FPU8 (60S ribosomal protein L27 OS=Cucurbita moschata OX=3662 GN=LOC111447385 PE=3 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 2.7e-65
Identity = 132/135 (97.78%), Postives = 134/135 (99.26%), Query Frame = 0


Query: 1   MVKFLKQNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSSK 60
           MVKFLKQNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAG+KKYP+KVIRKDSSK
Sbjct: 1   MVKFLKQNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGLKKYPSKVIRKDSSK 60

Query: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVDCLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVD LQSKDKKVTAAKETKKRFEER
Sbjct: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVDSLQSKDKKVTAAKETKKRFEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Lcy11g006950 vs. NCBI nr
Match: XP_022931548.1 (60S ribosomal protein L27-2-like [Cucurbita moschata] >XP_022942298.1 60S ribosomal protein L27-2-like [Cucurbita moschata] >XP_022983312.1 60S ribosomal protein L27-2-like [Cucurbita maxima] >XP_022985030.1 60S ribosomal protein L27-2-like [Cucurbita maxima] >XP_023521538.1 60S ribosomal protein L27-2-like [Cucurbita pepo subsp. pepo] >XP_023548326.1 60S ribosomal protein L27-2-like [Cucurbita pepo subsp. pepo] >XP_023551847.1 60S ribosomal protein L27-2-like [Cucurbita pepo subsp. pepo] >KAG6577087.1 60S ribosomal protein L27-3, partial [Cucurbita argyrosperma subsp. sororia] >KAG6600449.1 60S ribosomal protein L27-3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 259.2 bits (661), Expect = 1.9e-65
Identity = 133/135 (98.52%), Postives = 134/135 (99.26%), Query Frame = 0


Query: 1   MVKFLKQNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSSK 60
           MVKFLKQNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSSK
Sbjct: 1   MVKFLKQNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSSK 60

Query: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVDCLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVT+D LQSKDKKVTAAKETKKRFEER
Sbjct: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Lcy11g006950 vs. NCBI nr
Match: XP_022931553.1 (60S ribosomal protein L27-2-like [Cucurbita moschata] >XP_023521539.1 60S ribosomal protein L27-2-like [Cucurbita pepo subsp. pepo] >XP_023553223.1 60S ribosomal protein L27-2-like [Cucurbita pepo subsp. pepo] >KAG6577086.1 60S ribosomal protein L27-3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 258.8 bits (660), Expect = 2.5e-65
Identity = 132/135 (97.78%), Postives = 134/135 (99.26%), Query Frame = 0


Query: 1   MVKFLKQNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSSK 60
           MVKFLKQNKAVI+LQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSSK
Sbjct: 1   MVKFLKQNKAVIILQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSSK 60

Query: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVDCLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVT+D LQSKDKKVTAAKETKKRFEER
Sbjct: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Lcy11g006950 vs. NCBI nr
Match: XP_022985069.1 (60S ribosomal protein L27-2-like [Cucurbita maxima])

HSP 1 Score: 258.1 bits (658), Expect = 4.3e-65
Identity = 131/135 (97.04%), Postives = 134/135 (99.26%), Query Frame = 0


Query: 1   MVKFLKQNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSSK 60
           MVKFLKQNKAVI+LQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSSK
Sbjct: 1   MVKFLKQNKAVIILQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSSK 60

Query: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVDCLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVKAFIK+VNYRHLMPTRYTLDVDLKDVVT+D LQSKDKKVTAAKETKKRFEER
Sbjct: 61  KTAKKSRVKAFIKIVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Lcy11g006950 vs. NCBI nr
Match: XP_022942297.1 (60S ribosomal protein L27-2 [Cucurbita moschata] >XP_023513594.1 60S ribosomal protein L27-2 [Cucurbita pepo subsp. pepo] >KAG6600450.1 60S ribosomal protein L27-3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 257.7 bits (657), Expect = 5.6e-65
Identity = 132/135 (97.78%), Postives = 134/135 (99.26%), Query Frame = 0


Query: 1   MVKFLKQNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSSK 60
           MVKFLKQNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAG+KKYP+KVIRKDSSK
Sbjct: 1   MVKFLKQNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGLKKYPSKVIRKDSSK 60

Query: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVDCLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVD LQSKDKKVTAAKETKKRFEER
Sbjct: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVDSLQSKDKKVTAAKETKKRFEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Lcy11g006950 vs. NCBI nr
Match: XP_004147740.1 (60S ribosomal protein L27 [Cucumis sativus])

HSP 1 Score: 256.1 bits (653), Expect = 1.6e-64
Identity = 132/135 (97.78%), Postives = 133/135 (98.52%), Query Frame = 0


Query: 1   MVKFLKQNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSSK 60
           MVKFLK NKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDS+K
Sbjct: 1   MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60

Query: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVDCLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVD LQSKDKKVTAAKETKKRFEER
Sbjct: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVDSLQSKDKKVTAAKETKKRFEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Lcy11g006950 vs. TAIR 10
Match: AT3G22230.1 (Ribosomal L27e protein family )

HSP 1 Score: 229.6 bits (584), Expect = 1.5e-60
Identity = 114/135 (84.44%), Postives = 126/135 (93.33%), Query Frame = 0


Query: 1   MVKFLKQNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSSK 60
           MVKFLKQNKAVI+LQGRYAG+KAVII++FDDGT DR YGHCLVAG+KKYP+KVIRKDS+K
Sbjct: 1   MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGTSDRRYGHCLVAGLKKYPSKVIRKDSAK 60

Query: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVDCLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVK FIKLVNY+HLMPTRYTLDVDLK+V T+D L+SKDKKVTA KE K + EER
Sbjct: 61  KTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALKSKDKKVTALKEAKAKLEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Lcy11g006950 vs. TAIR 10
Match: AT4G15000.1 (Ribosomal L27e protein family )

HSP 1 Score: 229.6 bits (584), Expect = 1.5e-60
Identity = 114/135 (84.44%), Postives = 125/135 (92.59%), Query Frame = 0


Query: 1   MVKFLKQNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSSK 60
           MVKFLKQNKAVI+LQGRYAG+KAVII++FDDG RDR YGHCLVAG+KKYP+KVIRKDS+K
Sbjct: 1   MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGNRDRPYGHCLVAGLKKYPSKVIRKDSAK 60

Query: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVDCLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVK FIKLVNY+HLMPTRYTLDVDLK+V T+D LQSKDKKV A KE K + EER
Sbjct: 61  KTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALQSKDKKVAALKEAKAKLEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Lcy11g006950 vs. TAIR 10
Match: AT2G32220.1 (Ribosomal L27e protein family )

HSP 1 Score: 210.7 bits (535), Expect = 7.4e-55
Identity = 101/135 (74.81%), Postives = 121/135 (89.63%), Query Frame = 0


Query: 1   MVKFLKQNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSSK 60
           MVK +K  KAVI+LQGRY G+KAVI+++FDDGT ++ YGHCLVAG+KKYP+KVIRKDS+K
Sbjct: 1   MVKCMKPGKAVILLQGRYTGKKAVIVKSFDDGTVEKKYGHCLVAGLKKYPSKVIRKDSAK 60

Query: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVDCLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVK F K++NY+H+MPTRYTLD+DLK+VV+ D + SKDKKVTA KE K +FEER
Sbjct: 61  KTAKKSRVKCFFKVINYQHVMPTRYTLDLDLKNVVSADAISSKDKKVTALKEAKAKFEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Lcy11g006950 vs. TAIR 10
Match: AT4G15000.2 (Ribosomal L27e protein family )

HSP 1 Score: 204.1 bits (518), Expect = 6.9e-53
Identity = 102/123 (82.93%), Postives = 113/123 (91.87%), Query Frame = 0


Query: 1   MVKFLKQNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSSK 60
           MVKFLKQNKAVI+LQGRYAG+KAVII++FDDG RDR YGHCLVAG+KKYP+KVIRKDS+K
Sbjct: 1   MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGNRDRPYGHCLVAGLKKYPSKVIRKDSAK 60

Query: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVDCLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVK FIKLVNY+HLMPTRYTLDVDLK+V T+D LQSKDKKV A KE K + EER
Sbjct: 61  KTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALQSKDKKVAALKEAKAKLEER 120

Query: 121 FKT 124
           FKT
Sbjct: 121 FKT 123

The following BLAST results are available for this feature:

BLAST of Lcy11g006950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LCL3	2.2e-59	84.44	60S ribosomal protein L27-2 OS=Arabidopsis thaliana OX=3702 GN=RPL27B PE=2 SV=2	[more]
P51419	2.2e-59	84.44	60S ribosomal protein L27-3 OS=Arabidopsis thaliana OX=3702 GN=RPL27C PE=2 SV=2	[more]
Q05462	6.3e-59	83.70	60S ribosomal protein L27 OS=Pisum sativum OX=3888 GN=RPL27 PE=2 SV=1	[more]
Q9SKX8	1.0e-53	74.81	60S ribosomal protein L27-1 OS=Arabidopsis thaliana OX=3702 GN=RPL27A PE=2 SV=1	[more]
P41101	2.6e-52	77.70	60S ribosomal protein L27 OS=Solanum tuberosum OX=4113 GN=RPL27 PE=2 SV=1	[more]

BLAST of Lcy11g006950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JA75	9.4e-66	98.52	60S ribosomal protein L27 OS=Cucurbita maxima OX=3661 GN=LOC111483122 PE=3 SV=1	[more]
A0A6J1EZ01	9.4e-66	98.52	60S ribosomal protein L27 OS=Cucurbita moschata OX=3662 GN=LOC111437692 PE=3 SV=...	[more]
A0A6J1EZ07	1.2e-65	97.78	60S ribosomal protein L27 OS=Cucurbita moschata OX=3662 GN=LOC111437697 PE=3 SV=...	[more]
A0A6J1JC92	2.1e-65	97.04	60S ribosomal protein L27 OS=Cucurbita maxima OX=3661 GN=LOC111483151 PE=3 SV=1	[more]
A0A6J1FPU8	2.7e-65	97.78	60S ribosomal protein L27 OS=Cucurbita moschata OX=3662 GN=LOC111447385 PE=3 SV=...	[more]

BLAST of Lcy11g006950 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022931548.1	1.9e-65	98.52	60S ribosomal protein L27-2-like [Cucurbita moschata] >XP_022942298.1 60S riboso...	[more]
XP_022931553.1	2.5e-65	97.78	60S ribosomal protein L27-2-like [Cucurbita moschata] >XP_023521539.1 60S riboso...	[more]
XP_022985069.1	4.3e-65	97.04	60S ribosomal protein L27-2-like [Cucurbita maxima]	[more]
XP_022942297.1	5.6e-65	97.78	60S ribosomal protein L27-2 [Cucurbita moschata] >XP_023513594.1 60S ribosomal p...	[more]
XP_004147740.1	1.6e-64	97.78	60S ribosomal protein L27 [Cucumis sativus]	[more]

BLAST of Lcy11g006950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22230.1	1.5e-60	84.44	Ribosomal L27e protein family	[more]
AT4G15000.1	1.5e-60	84.44	Ribosomal L27e protein family	[more]
AT2G32220.1	7.4e-55	74.81	Ribosomal L27e protein family	[more]
AT4G15000.2	6.9e-53	82.93	Ribosomal L27e protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 100..120
None	No IPR available	PANTHER	PTHR10497:SF16	60S RIBOSOMAL PROTEIN L27	coord: 1..135
IPR038655	Ribosomal protein L27e superfamily	GENE3D	2.30.30.770		coord: 1..135 e-value: 1.8E-59 score: 201.7
IPR001141	Ribosomal protein L27e	PFAM	PF01777	Ribosomal_L27e	coord: 52..135 e-value: 1.9E-31 score: 108.2
IPR001141	Ribosomal protein L27e	PANTHER	PTHR10497	60S RIBOSOMAL PROTEIN L27	coord: 1..135
IPR018262	Ribosomal protein L27e, conserved site	PROSITE	PS01107	RIBOSOMAL_L27E	coord: 124..135
IPR041991	Eukaryotic Ribosomal Protein L27, KOW domain	CDD	cd06090	KOW_RPL27	coord: 6..88 e-value: 4.67407E-40 score: 127.3
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 3..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g006950.1	Lcy11g006950.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome