Lcy11g006870 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g006870
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Reticulon-like protein
Location	Chr11: 6979592 .. 6984277 (+)
RNA-Seq Expression	Lcy11g006870
Synteny	Lcy11g006870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGCCATTTCTCTTTGATATTGTGGAATCCCATAACTCTTTCTCTCTTTCTCCCGTTTTTCTGTAGTTCTGAACGGATTTTTTAAGAACCCATTTTCATTTGTCTCTTCGTTTTCTTCTTCTCCAATTTCTTGCTCGAAGACCCTTTAATCTCCTGCGCCTGGTTTGTTTTCTTGTGTTCTGTTTCGGATTTTTGTCGATTTTCTACTTCTTTTGCGTTCTCTTTCAACGGATTCTGTCTTTTAGTTGGTTTGTTTGATGCATAAATGGGGTTAAATGCTGCTAATTCTGCTTAATTTTCTGGGTTGTGGGAGTTTTGCTCTCTCTCTTTTTGTTTACTTCTGCTTGAATCTTAGTAGCCGTCCTGTTAATCTCTTACATCTGGTTCATCCTTCGCTGTACGGTCTCTGTCTTTTGAAGATTCCATTTCTTCTTATCTTGTATTACTGCGGCTGAGTTTTTGGTTGAATCTGGAGCTTATAATGCTTAAATGAGGTTGGATTGCTTTTGATTTTGCTTATACTTGGTAATCTCCGAAGGGTTGAAATGTTGGATTACTTTTGCTTTTGAGTCTAAAGTAATTGATGACTTTTCATTGTTGTTTTGCCTTTTCTGGTTTTCTTATGCTTCCTGGTCAGTTTAAATCAGCATTTTGTTTTCTTAAAAAAGTTGTTTCGTGCTTTTGAACGTTGTTGTCTTGTTGATTCATCAGAAGACAGAAACATTTACTATGCTTTAGTTTGTTTGACGTGAAATTATGAAGAAATGTGGCAGACTTTTTTCACATGATTACAATCGTCAAAATTTTTAAAGAATGGATTCTACTTTTTAAGCTGTTAGAATGGCCTCCTTCCCCCTTGATTTGATATTTTTCATACAAGGTTTCTGTCAAACTCTGGTTGACCTCAAACGAATATTGATCTTCTGATATTCGTTAGCACAAGCAAGGTTGAGTGAGTTAGATCAATGTTAACTTTAAAAAGCTCTGCCAATTTTCATTTTAACTGTGGTGGTACACAGCCTTTCAAATCTTCTCGTGATTCTCTACCAAATATGGCCTCTTGTTGGAGTGCCCTTCACAAAAAAATGATATATTTTTTTTTGTTAAAACTCAGAATTCAGTACATAGTCTTTGCTTTCTATCATAAACTCTATCAAATGAAATAAATTTTCCTTCTTTAGCATGCCTGCTGTCACCACTATAAATTCCTTGTTGTTTTAATGTATCTTTTTAATACCTCGAGTATCCGGGCCAACTTGCGCTTTTTTCTTGAATGTAATTCCCTTCAACTCTTTCCCTTCTCCATATGCTTGTTGCGGGCAAGGTTGCTCGGTATCCTGACAATTTATTTCAAGTCCACATATGATTTTGATTACATTATTGTTGTGCCAGAATTTATAATTCCTCTTGTATGATTACTATCGAAAGATCTCCTGTCAAAGTTTTTATTGAGAGATCTTAATTGCAAATTGAAATGGATAACCTGTTGAATTCTTGCCTTGCTCTGAGAATTGTAGAAGGAGATGGCTCTTTTATGTTTTCTCTTTCTTTCGGGTTCCTTCTATAAACAAGATTCCAAGTCTGAGAAAGAAAATTAAAAATGAAAACCTCAGCTGTAGCTGGTGTTGCCATGGTTTGGACATTATATGTAATGCAACTAAGAAAAAGCATTACCAGAAGTTGGATCTCCAGCCTAAACATCCTCCTAAAATTGATCCTGGAGCTTAGACCTAGGCTCCTTTACCCAGATGATTCCTCTCATATATCCTATTGACTATTATTTAAATTTCTGACATGTTAAACTTTCACTCTTTTACATAACTATAGTTCTTATTTTGTGCTTGTTTATATCAATATATATCTACTTTCTTGCTGTAGAACAACCTAGTCCTTAACATTGGCTACCTCTTTCTTGTTATTTCTTTTCTGAAGCACAAGAACAATGTCTGAGAAGATAACTGCTGAGGATCTTCTTAATAATATTTCTGAAGCTCTTGCTGAACATGGTCAAAAGGCAAAATCAGTATCGTTTTTCGGGGAAGATAGTAAATCGAGTTCAGTGGCTGGTCAGATCAAGCGGATACTTGGACGCCAAAAGCCTGTTCACCATCTTCTCGGGGGTGGAAAATGTATATGCTTATTTATATACTCGTCCTTTTTCATCTTCTATAATCTTTTTCATGTCACTAATCATATTACTTCATTTTGATTTCAATGCTGACCAAATCTTTGTAGCTGCTGATGTGCTGCTATGGAGGAACAAGAAAATCTCAGCCAGTGTTTTGACTGGTGCAACCATTATATGGGTGCTGTTTGAATGGCTTAATTACCACTTCTTGACTCTTGTTTGCTTTGCTTTGGTTCTTGGTATGTTGGCTCAGTTTATATGGACAAACGCCTCAGGATTTCTGAACAGGTGATTGAACAATGGATGTTTATGCCTTTGTTTTTCGTTGGCTTCGATGCATTTTCTGGTTTAACGAATGTAGATGCATTCTGTAATATATTTCGTGCACTTGCAGATCATCGTCCAGGGTTCCTCGTGTCGTTCTTCCCGAGGAACTATTTGTCAATATTGCAGTCTCATTTGGTGCCGAGGTTAACCGAGCTCTGGGTCTTCTCCAAGATATTGCTTGTGAAGGAAATTTGAAACACTTCCTTGTGGTAAGCTAACATATTCTGTGTCCTTCCTTTGCAATTCTGTTGCATTTCTAAAGATCTATAGTATTCTCTGCACTAGTCATTCATACACGAGTATTTCGGTAGTAGACCTTGAAATTGGATAAATACGAGCATCGACTTTCTATTATTGATTTTGAGCTCCTAGCTGTAGCTGGGCATTCTTGAAAAACTGGTAATAACCAAAATGACTGGTTCGGTTTTGTCAATTCTTTGGGTTTATGTACACCTTTATCTGCTCTTGTCAATTCTGAGAATGTCATTTGTCTAATAGCAATTTTAAATTCTAATTTCTGAAAGAAACTGCTCAAAACCATGAACTATCTTCATCAATGAATCCCAATGACATTACTCAATAATAGAAATGAGTGGCAAAAGAAGCAATATGAAAAATGCCTCTCCATCTCTTCTGAATTTGCTGCTGCTTCAGGAAGTGATATATGTAACTAACATGAATTTAGATCAGTAAATGTGATTTTTATTTTTCATTAACATGAATTTGAGAATAAATGTGAACACCAAAACATTGGACATTTGAGAAATATGCTGGCTCAGTTTTGCAATGATCTTCAATATTGGATGGAGTTTCTTTGCTTATAACTCCTTAACAAACCTGTTAGATTGCTGATTTGATTTTCTTGGAGATGCTTCTTTAATGTGAATATTTTTTCAGGCTGTAGTAAGCTTGTGGGCTGGTGCTGTGATTAGTAGCTGGTGCAATTTCATAACTGTCTTGTATATTGGTAAGTGGTTACATGTTCTGCATCTCAAAACATTTTGATTCTCTGATGAGCCAAGCTTCTCTATATTATTTACCTAAACCGGTAAATGGAATTATCGCGGTTTGATCTAATGTCAAAACGTTAAGCTACAAATTTAGATGATGTATTTGAACTCTTCGATTAAAACTGCGATGGCTGCTTACTTAGGATATCCTAAAATTCTTTTAACAAATGTTGTAGGATAAGATGATTGTTGTGTGAAACTAGTTGAGATGATTGTAGCTTGTCTCGGACACGGATCGGTGAAACTGTTTGAATTATCTTGCTTCTCTGTGGAAGTGAAAGCGACTTTGGCTATTTCATTACCTAATATAGGATAGATACCATGGGAAATTCGACACCCTTAGGAAGTTTTATATTCCACATTCACAACTGATGCGTAATTATTTTCAAACACGAAATATTGTTTTTTTTTTTTTTTTTGTGAAATTAGTTGAGATGAGCGTAAAATGTCCTAAAAAATAAAGGCGTAACTAATGAAAGTGTTTGAATAATCTTGCTTCTTTGTCAGAGGAACTTGGCAATTTCCTGAACTAAGGTAGGATAGAAACCTTTTGATGACCAACCAAAGGAGATCCTATGTTCCTTGGAAAATCTACAATCATCCATTTTAACAACTAACACATTTCAAATATGTTCAGGTTTCGTTGCGGCCCATACGCTTCCAATTCTATACGAGAAATATGAAGATGAAGTCGACACCTTTGCATACAAGGTCTTCGACCAACTCCGCGGTCACTATCAGAAGCTCGATTCCAGCGTCCTTAGCAAGATCCCGAAAGGGTCGTTCAAGGGAAAGAAGTATGAATAGATCATTTTCGACTCAGCAATGGCCAAACCATCTCTAGTTTTTGCAAGGAATTGGTTGTGTATCATAAAAATGGGAAAATATTATCTCTTTTGGATGGAGACCAAATAGTAGAAATGGATCCTTAGTTTTAAGAAGATTGTATTTGCCAATTTGCTGAACTAGGAGAGCCATTGGCTTCATTATTATAACTGCTTCAAGTTGGAATCCTCTTTTACTTCAACATTGGAATGTTGTTTGAAGCAAAAGCCTTGGCCCAAGGAAGAGTGGTGAGATATCTTTTTATTGCCTATTTTCTTGCCCAAGATACAACTTTTGATGTCATAAAAATTGAAAAATGATCTCTTGCAATGGTGAGAGATTTTAAAAGATTAGTCTACAAAATGATCTTTTATAAAAATGAAAGTTTGTTTGATAA

mRNA sequence

CGCCATTTCTCTTTGATATTGTGGAATCCCATAACTCTTTCTCTCTTTCTCCCGTTTTTCTGTAGTTCTGAACGGATTTTTTAAGAACCCATTTTCATTTGTCTCTTCGTTTTCTTCTTCTCCAATTTCTTGCTCGAAGACCCTTTAATCTCCTGCGCCTGGTTTGTTTTCTTGTGTTCTGTTTCGGATTTTTGTCGATTTTCTACTTCTTTTGCGTTCTCTTTCAACGGATTCTGTCTTTTAGTTGGTTTGTTTGATGCATAAATGGGGTTAAATGCTGCTAATTCTGCTTAATTTTCTGGGTTGTGGGAGTTTTGCTCTCTCTCTTTTTGTTTACTTCTGCTTGAATCTTAGTAGCCGTCCTGTTAATCTCTTACATCTGGTTCATCCTTCGCTGTACGGTCTCTGTCTTTTGAAGATTCCATTTCTTCTTATCTTGTATTACTGCGGCTGAGTTTTTGGTTGAATCTGGAGCTTATAATGCTTAAATGAGGTTGGATTGCTTTTGATTTTGCTTATACTTGGTAATCTCCGAAGGGTTGAAATGTTGGATTACTTTTGCTTTTGAGTCTAAAGTAATTGATGACTTTTCATTGTTGTTTTGCCTTTTCTGGTTTTCTTATGCTTCCTGGTCAGTTTAAATCAGCATTTTGTTTTCTTAAAAAAGTTGTTTCGTGCTTTTGAACGTTGTTGTCTTGTTGATTCATCAGAAGACAGAAACATTTACTATGCTTTAGTTTGTTTGACGTGAAATTATGAAGAAATGTGGCAGACTTTTTTCACATGATTACAATCGTCAAAATTTTTAAAGAATGGATTCTACTTTTTAAGCTGTTAGAATGGCCTCCTTCCCCCTTGATTTGATATTTTTCATACAAGGTTTCTGTCAAACTCTGGTTGACCTCAAACGAATATTGATCTTCTGATATTCGTTAGCACAAGCAAGGTTGAGTGAGTTAGATCAATGTTAACTTTAAAAAGCTCTGCCAATTTTCATTTTAACTGTGGTGGTACACAGCCTTTCAAATCTTCTCGTGATTCTCTACCAAATATGGCCTCTTGTTGGAGTGCCCTTCACAAAAAAATGATATATTTTTTTTTGTTAAAACTCAGAATTCAGTACATAGTCTTTGCTTTCTATCATAAACTCTATCAAATGAAATAAATTTTCCTTCTTTAGCATGCCTGCTGTCACCACTATAAATTCCTTGTTGTTTTAATGTATCTTTTTAATACCTCGAGTATCCGGGCCAACTTGCGCTTTTTTCTTGAATGTAATTCCCTTCAACTCTTTCCCTTCTCCATATGCTTGTTGCGGGCAAGGTTGCTCGGTATCCTGACAATTTATTTCAAGTCCACATATGATTTTGATTACATTATTGTTGTGCCAGAATTTATAATTCCTCTTGTATGATTACTATCGAAAGATCTCCTGTCAAAGTTTTTATTGAGAGATCTTAATTGCAAATTGAAATGGATAACCTGTTGAATTCTTGCCTTGCTCTGAGAATTGTAGAAGGAGATGGCTCTTTTATGTTTTCTCTTTCTTTCGGGTTCCTTCTATAAACAAGATTCCAAGTCTGAGAAAGAAAATTAAAAATGAAAACCTCAGCTGTAGCTGGTGTTGCCATGGTTTGGACATTATATGTAATGCAACTAAGAAAAAGCATTACCAGAAGTTGGATCTCCAGCCTAAACATCCTCCTAAAATTGATCCTGGAGCTTAGACCTAGGCTCCTTTACCCAGATGATTCCTCTCATATATCCTATTGACTATTATTTAAATTTCTGACATGTTAAACTTTCACTCTTTTACATAACTATAGTTCTTATTTTGTGCTTGTTTATATCAATATATATCTACTTTCTTGCTGTAGAACAACCTAGTCCTTAACATTGGCTACCTCTTTCTTGTTATTTCTTTTCTGAAGCACAAGAACAATGTCTGAGAAGATAACTGCTGAGGATCTTCTTAATAATATTTCTGAAGCTCTTGCTGAACATGGTCAAAAGGCAAAATCAGTATCGTTTTTCGGGGAAGATAGTAAATCGAGTTCAGTGGCTGGTCAGATCAAGCGGATACTTGGACGCCAAAAGCCTGTTCACCATCTTCTCGGGGGTGGAAAATCTGCTGATGTGCTGCTATGGAGGAACAAGAAAATCTCAGCCAGTGTTTTGACTGGTGCAACCATTATATGGGTGCTGTTTGAATGGCTTAATTACCACTTCTTGACTCTTGTTTGCTTTGCTTTGGTTCTTGGTATGTTGGCTCAGTTTATATGGACAAACGCCTCAGGATTTCTGAACAGATCATCGTCCAGGGTTCCTCGTGTCGTTCTTCCCGAGGAACTATTTGTCAATATTGCAGTCTCATTTGGTGCCGAGGTTAACCGAGCTCTGGGTCTTCTCCAAGATATTGCTTGTGAAGGAAATTTGAAACACTTCCTTGTGGCTGTAGTAAGCTTGTGGGCTGGTGCTGTGATTAGTAGCTGGTGCAATTTCATAACTGTCTTGTATATTGGTTTCGTTGCGGCCCATACGCTTCCAATTCTATACGAGAAATATGAAGATGAAGTCGACACCTTTGCATACAAGGTCTTCGACCAACTCCGCGGTCACTATCAGAAGCTCGATTCCAGCGTCCTTAGCAAGATCCCGAAAGGGTCGTTCAAGGGAAAGAAGTATGAATAGATCATTTTCGACTCAGCAATGGCCAAACCATCTCTAGTTTTTGCAAGGAATTGGTTGTGTATCATAAAAATGGGAAAATATTATCTCTTTTGGATGGAGACCAAATAGTAGAAATGGATCCTTAGTTTTAAGAAGATTGTATTTGCCAATTTGCTGAACTAGGAGAGCCATTGGCTTCATTATTATAACTGCTTCAAGTTGGAATCCTCTTTTACTTCAACATTGGAATGTTGTTTGAAGCAAAAGCCTTGGCCCAAGGAAGAGTGGTGAGATATCTTTTTATTGCCTATTTTCTTGCCCAAGATACAACTTTTGATGTCATAAAAATTGAAAAATGATCTCTTGCAATGGTGAGAGATTTTAAAAGATTAGTCTACAAAATGATCTTTTATAAAAATGAAAGTTTGTTTGATAA

Coding sequence (CDS)

ATGTCTGAGAAGATAACTGCTGAGGATCTTCTTAATAATATTTCTGAAGCTCTTGCTGAACATGGTCAAAAGGCAAAATCAGTATCGTTTTTCGGGGAAGATAGTAAATCGAGTTCAGTGGCTGGTCAGATCAAGCGGATACTTGGACGCCAAAAGCCTGTTCACCATCTTCTCGGGGGTGGAAAATCTGCTGATGTGCTGCTATGGAGGAACAAGAAAATCTCAGCCAGTGTTTTGACTGGTGCAACCATTATATGGGTGCTGTTTGAATGGCTTAATTACCACTTCTTGACTCTTGTTTGCTTTGCTTTGGTTCTTGGTATGTTGGCTCAGTTTATATGGACAAACGCCTCAGGATTTCTGAACAGATCATCGTCCAGGGTTCCTCGTGTCGTTCTTCCCGAGGAACTATTTGTCAATATTGCAGTCTCATTTGGTGCCGAGGTTAACCGAGCTCTGGGTCTTCTCCAAGATATTGCTTGTGAAGGAAATTTGAAACACTTCCTTGTGGCTGTAGTAAGCTTGTGGGCTGGTGCTGTGATTAGTAGCTGGTGCAATTTCATAACTGTCTTGTATATTGGTTTCGTTGCGGCCCATACGCTTCCAATTCTATACGAGAAATATGAAGATGAAGTCGACACCTTTGCATACAAGGTCTTCGACCAACTCCGCGGTCACTATCAGAAGCTCGATTCCAGCGTCCTTAGCAAGATCCCGAAAGGGTCGTTCAAGGGAAAGAAGTATGAATAG

Protein sequence

MSEKITAEDLLNNISEALAEHGQKAKSVSFFGEDSKSSSVAGQIKRILGRQKPVHHLLGGGKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFIWTNASGFLNRSSSRVPRVVLPEELFVNIAVSFGAEVNRALGLLQDIACEGNLKHFLVAVVSLWAGAVISSWCNFITVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLRGHYQKLDSSVLSKIPKGSFKGKKYE

Homology

[Close]

BLAST of Lcy11g006870 vs. ExPASy Swiss-Prot
Match: Q9SS37 (Reticulon-like protein B8 OS=Arabidopsis thaliana OX=3702 GN=RTNLB8 PE=2 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 3.3e-82
Identity = 149/249 (59.84%), Postives = 189/249 (75.90%), Query Frame = 0


Query: 1   MSEKITAEDLLNNISEALAEHGQKAKSVSFFGEDSKSSSVAGQIKRILGRQKPVHHLLGG 60
           M +K   ED++ ++ +   E  QK K  S F E  +  SV+ +  R+  RQKP+HH+LGG
Sbjct: 1   MPDKNIVEDVIGDLVDNFTETVQKNKHGSSFFE--QEDSVSSRFNRLFDRQKPIHHVLGG 60

Query: 61  GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFIWTNASGF 120
           GKSADVLLWRNKKISASVL GAT IWVLFEW+N+HFL+LVC+AL+LGM+AQF+W+NASGF
Sbjct: 61  GKSADVLLWRNKKISASVLMGATAIWVLFEWINFHFLSLVCYALLLGMIAQFVWSNASGF 120

Query: 121 LNRSSSRVPRVVLPEELFVNIAVSFGAEVNRALGLLQDIACEGNLKHFLVAVVSLWAGAV 180
           LNRS SRVPR+VLP++ F  + V+ G EVNR L  LQD+AC+GNLK FL+AV+ LW  A+
Sbjct: 121 LNRSQSRVPRLVLPKDFFAEVGVAVGKEVNRGLLFLQDLACKGNLKQFLMAVIGLWVAAM 180

Query: 181 ISSWCNFITVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLRGHYQKLDSSVLSKIPK 240
           + S CNF+TVLYIGFV AHT+P+LYE+YEDEVD F   +  +   HY+KLD+  LS+IP 
Sbjct: 181 VGSCCNFLTVLYIGFVGAHTMPVLYERYEDEVDGFMDSMIMKFHSHYKKLDTGFLSRIPS 240

Query: 241 GSFKGKKYE 250
           G F  KK E
Sbjct: 241 GKFGLKKRE 247

[Close]

BLAST of Lcy11g006870 vs. ExPASy Swiss-Prot
Match: O82352 (Reticulon-like protein B5 OS=Arabidopsis thaliana OX=3702 GN=RTNLB5 PE=1 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 2.0e-55
Identity = 110/241 (45.64%), Postives = 157/241 (65.15%), Query Frame = 0


Query: 6   TAEDLLNNISEALAEHGQKAKSVSFFGEDSKSSSVAGQIKRILGRQKPVHHLLGGGKSAD 65
           T E L+  ISE +  H   + S S + +    S+V  +I R+ GR+KPVH +LGGGK AD
Sbjct: 11  TEESLMEKISEKIHHHDSSSSSESEYEKPDSPSAVKAKIYRMFGREKPVHKVLGGGKPAD 70

Query: 66  VLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFIWTNASGFLNRSS 125
           V LWR+KK+S +VL  AT IWVLFE + YH L+L+C   +L +   F+W+NA   +N++S
Sbjct: 71  VFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWSNAHTLINKTS 130

Query: 126 SRVPRVVLPEELFVNIAVSFGAEVNRALGLLQDIACEGNLKHFLVAVVSLWAGAVISSWC 185
            ++P + +PEE F+ +A S   E+N+A  +L+ IA   +LK FL+ VV LW  +V+ +W 
Sbjct: 131 PQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGLWIISVVGNWF 190

Query: 186 NFITVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLRGHYQKLDSSVLSKIPKGSFKG 245
           NF+T++YI FV  HT+P+LYEK+ED+VD  A K   +L+  Y   D  VLSKIP  S K 
Sbjct: 191 NFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDEKVLSKIPIASLKA 250

Query: 246 K 247
           K
Sbjct: 251 K 251

[Close]

BLAST of Lcy11g006870 vs. ExPASy Swiss-Prot
Match: Q6DBN4 (Reticulon-like protein B6 OS=Arabidopsis thaliana OX=3702 GN=RTNLB6 PE=1 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.5e-53
Identity = 106/239 (44.35%), Postives = 155/239 (64.85%), Query Frame = 0


Query: 8   EDLLNNISEALAEHGQKAKSVSFFGEDSKSSSVAGQIKRILGRQKPVHHLLGGGKSADVL 67
           E L+  I++ + +H   + S S   +    S++  +I R+ GR+KPVH +LGGG  ADV 
Sbjct: 13  ESLMEKIADKIHDHDSSSSSDSEHEKPESPSALKAKIYRLFGREKPVHKVLGGGLPADVF 72

Query: 68  LWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFIWTNASGFLNRSSSR 127
           LWR+KK+SASVL  AT IWVLFE + YHFL+LVC  L+  + A F+ +NA  F+N++  +
Sbjct: 73  LWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALAALFLLSNAHAFMNKTPPK 132

Query: 128 VPRVVLPEELFVNIAVSFGAEVNRALGLLQDIACEGNLKHFLVAVVSLWAGAVISSWCNF 187
           +P + + EE F+ I  +   E+N+A  +L+ IA   +LK FL+ V  LW  +V+ +W NF
Sbjct: 133 IPEIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLKKFLMVVFGLWIISVVGNWFNF 192

Query: 188 ITVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLRGHYQKLDSSVLSKIPKGSFKGK 247
           +T++YI FV  HT+P+LYEK+ED+VD  A K   +L+ HY   D  VLSK+P  S K K
Sbjct: 193 LTLVYICFVVLHTVPMLYEKHEDKVDPVAEKTLKELKKHYMVFDEKVLSKLPVASLKAK 251

[Close]

BLAST of Lcy11g006870 vs. ExPASy Swiss-Prot
Match: Q9SUR3 (Reticulon-like protein B1 OS=Arabidopsis thaliana OX=3702 GN=RTNLB1 PE=1 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 2.3e-51
Identity = 104/256 (40.62%), Postives = 155/256 (60.55%), Query Frame = 0


Query: 3   EKITAEDLLNNISEALAEHGQKAKSVSFFGED-----------SKSSSVAGQIKRILGRQ 62
           E +  E L++ ISE +  HG  + S S   +D           S SSS+  ++ R+ GR+
Sbjct: 19  EVVERESLMDKISEKI-HHGGDSSSSSSSSDDEDEKKKTKKPSSPSSSMKSKVYRLFGRE 78

Query: 63  KPVHHLLGGGKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQ 122
           +PVH +LGGGK AD+ +W+NKK+S  VL GAT  WV+FE + YH LTL+C  +++ +   
Sbjct: 79  QPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIVVLAVL 138

Query: 123 FIWTNASGFLNRSSSRVPRVVLPEELFVNIAVSFGAEVNRALGLLQDIACEGNLKHFLVA 182
           F+W+NA+ F+N+S  ++P V +PEE  + +A     E+NR    L++IA   +LK FL+A
Sbjct: 139 FLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFLIA 198

Query: 183 VVSLWAGAVISSWCNFITVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLRGHYQKLD 242
           +  LW  +++    NF+T+ YI  V   T+P+ Y+KYED+VD    K   +L+  Y  LD
Sbjct: 199 IAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQYAVLD 258

Query: 243 SSVLSKIPKGSFKGKK 248
             VLSKIP G  K KK
Sbjct: 259 EKVLSKIPLGPLKNKK 273

[Close]

BLAST of Lcy11g006870 vs. ExPASy Swiss-Prot
Match: Q9SH59 (Reticulon-like protein B3 OS=Arabidopsis thaliana OX=3702 GN=RTNLB3 PE=2 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 4.0e-51
Identity = 100/240 (41.67%), Postives = 151/240 (62.92%), Query Frame = 0


Query: 8   EDLLNNISEALAEHGQKAKSVSFFGEDSKSSSVAGQIKRILGRQKPVHHLLGGGKSADVL 67
           E ++  ISE +  H   + S S   +D  S+S+  +I R+ GR++P+H L GGGK AD+ 
Sbjct: 9   ESIMEKISEKIHGHDDSSSSSSDSDDDKNSASLKTKIYRLFGREQPLHKLFGGGKPADIF 68

Query: 68  LWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFIWTNASGFLNRSSSR 127
           LWRNKK+S  VL  AT+ W+LFE L Y+ LTL     +L +   F+W++AS F+++S   
Sbjct: 69  LWRNKKVSGGVLGAATVSWILFELLEYNLLTLFGHISILALAVLFLWSSASTFIHKSPLH 128

Query: 128 VPRVVLPEELFVNIAVSFGAEVNRALGLLQDIACEGNLKHFLVAVVSLWAGAVISSWCNF 187
           +P V +PE++ + +A     E+NR   +L+DIA   +LK FL+ +  LW  + + S CNF
Sbjct: 129 IPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLKKFLLVIAGLWVLSKVGSSCNF 188

Query: 188 ITVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLRGHYQKLD----SSVLSKIPKGSF 244
           +T++YI  V   T+P+LYEKYED+VD F  K   +++  Y + D    S V+SKIPKG+F
Sbjct: 189 LTLIYIATVLLFTIPVLYEKYEDKVDDFGEKAMREIKKQYVEFDVKVLSKVMSKIPKGAF 248

[Close]

BLAST of Lcy11g006870 vs. ExPASy TrEMBL
Match: A0A6J1C5Q7 (Reticulon-like protein OS=Momordica charantia OX=3673 GN=LOC111008204 PE=4 SV=1)

HSP 1 Score: 459.9 bits (1182), Expect = 6.7e-126
Identity = 231/249 (92.77%), Postives = 240/249 (96.39%), Query Frame = 0


Query: 1   MSEKITAEDLLNNISEALAEHGQKAKSVSFFGEDSKSSSVAGQIKRILGRQKPVHHLLGG 60
           MSEKITAED+L+NI+E LAE GQKAKSVSFFGEDSKSSSVA QI R+ GRQKPVHH+LGG
Sbjct: 1   MSEKITAEDILHNIAETLAEQGQKAKSVSFFGEDSKSSSVASQINRLFGRQKPVHHILGG 60

Query: 61  GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFIWTNASGF 120
           GKSADVLLWRNKKISASVL+GATIIWVLFEWLNYHFLTLVCFALVLGMLAQFIWTNASGF
Sbjct: 61  GKSADVLLWRNKKISASVLSGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFIWTNASGF 120

Query: 121 LNRSSSRVPRVVLPEELFVNIAVSFGAEVNRALGLLQDIACEGNLKHFLVAVVSLWAGAV 180
           +NRSSSRVPR+VLPEELFVNIAVS GAEVNRALG LQD+ACEGNLKHFLVAVVSLWAGAV
Sbjct: 121 VNRSSSRVPRLVLPEELFVNIAVSVGAEVNRALGYLQDVACEGNLKHFLVAVVSLWAGAV 180

Query: 181 ISSWCNFITVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLRGHYQKLDSSVLSKIPK 240
           ISSWCNFITVLYIGFVAAHTLPILYEKYEDEVD FAYKV DQLRGHYQKLDSSVLSKIPK
Sbjct: 181 ISSWCNFITVLYIGFVAAHTLPILYEKYEDEVDGFAYKVLDQLRGHYQKLDSSVLSKIPK 240

Query: 241 GSFKGKKYE 250
           GSFKGKKYE
Sbjct: 241 GSFKGKKYE 249

[Close]

BLAST of Lcy11g006870 vs. ExPASy TrEMBL
Match: A0A0A0KXG6 (Reticulon-like protein OS=Cucumis sativus OX=3659 GN=Csa_4G063430 PE=4 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 1.8e-123
Identity = 226/249 (90.76%), Postives = 237/249 (95.18%), Query Frame = 0


Query: 1   MSEKITAEDLLNNISEALAEHGQKAKSVSFFGEDSKSSSVAGQIKRILGRQKPVHHLLGG 60
           MSEK+TAED +NNISE L EHGQK KSVSFFGEDSKSSSVAGQI RI GRQKPV++LLGG
Sbjct: 1   MSEKMTAEDFINNISEVLTEHGQKGKSVSFFGEDSKSSSVAGQINRIFGRQKPVYNLLGG 60

Query: 61  GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFIWTNASGF 120
           GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQF+WTNASGF
Sbjct: 61  GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFMWTNASGF 120

Query: 121 LNRSSSRVPRVVLPEELFVNIAVSFGAEVNRALGLLQDIACEGNLKHFLVAVVSLWAGAV 180
           LNRSSS VPR+VLP+ELFVNIAV+FGAEVNRAL  LQDIACEGNLKHFLVAVVSLW GAV
Sbjct: 121 LNRSSSNVPRLVLPKELFVNIAVTFGAEVNRALCYLQDIACEGNLKHFLVAVVSLWVGAV 180

Query: 181 ISSWCNFITVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLRGHYQKLDSSVLSKIPK 240
           ISSWCNF+TVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQL GHYQK DSSVLSKIP+
Sbjct: 181 ISSWCNFVTVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLCGHYQKFDSSVLSKIPR 240

Query: 241 GSFKGKKYE 250
           G+FKGKKYE
Sbjct: 241 GAFKGKKYE 249

[Close]

BLAST of Lcy11g006870 vs. ExPASy TrEMBL
Match: A0A6J1J2L8 (Reticulon-like protein OS=Cucurbita maxima OX=3661 GN=LOC111481251 PE=4 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 2.4e-123
Identity = 227/251 (90.44%), Postives = 242/251 (96.41%), Query Frame = 0


Query: 1   MSEKITAEDLLNNISEALAEHGQKAKSVSFFGEDSKSSSVAGQIKRILGRQKPVHHLLGG 60
           MSE+ITAE++L+NISE LAEHGQKAKSVSFFGEDSKSSSV GQIKRI GRQKPV+H+LGG
Sbjct: 1   MSERITAEEILSNISEVLAEHGQKAKSVSFFGEDSKSSSVTGQIKRIFGRQKPVYHILGG 60

Query: 61  GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFIWTNASGF 120
           GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTL+CFALVLGMLAQFIWT+ASG+
Sbjct: 61  GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLLCFALVLGMLAQFIWTSASGY 120

Query: 121 LNR--SSSRVPRVVLPEELFVNIAVSFGAEVNRALGLLQDIACEGNLKHFLVAVVSLWAG 180
           ++R  SSS+VPR+VLP+ELFVNIAVSFGAEVNRALG+LQDIACEGN KH LVAVVSLWAG
Sbjct: 121 MSRSSSSSKVPRIVLPDELFVNIAVSFGAEVNRALGVLQDIACEGNFKHLLVAVVSLWAG 180

Query: 181 AVISSWCNFITVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLRGHYQKLDSSVLSKI 240
           AVISSWCNFITVLYIGFVAAHTLPILYEKYEDEVDTFAYKV DQLRG YQKLDSSVLSKI
Sbjct: 181 AVISSWCNFITVLYIGFVAAHTLPILYEKYEDEVDTFAYKVIDQLRGQYQKLDSSVLSKI 240

Query: 241 PKGSFKGKKYE 250
           PKGSFKGKKYE
Sbjct: 241 PKGSFKGKKYE 251

[Close]

BLAST of Lcy11g006870 vs. ExPASy TrEMBL
Match: A0A6J1FQS5 (Reticulon-like protein OS=Cucurbita moschata OX=3662 GN=LOC111447930 PE=4 SV=1)

HSP 1 Score: 451.1 bits (1159), Expect = 3.1e-123
Identity = 227/250 (90.80%), Postives = 240/250 (96.00%), Query Frame = 0


Query: 1   MSEKITAEDLLNNISEALAEHGQKAKSVSFFGEDSKSSSVAGQIKRILGRQKPVHHLLGG 60
           MSE+ITAED+L+NISE LAEHGQKAKSVSFFGEDSKSSSV GQ+KRI GRQKPV+H+LGG
Sbjct: 1   MSERITAEDILSNISEVLAEHGQKAKSVSFFGEDSKSSSVTGQMKRIFGRQKPVYHILGG 60

Query: 61  GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFIWTNASGF 120
           GK ADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTL+CFALVLGML QFIWT+ASG+
Sbjct: 61  GKPADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLLCFALVLGMLGQFIWTSASGY 120

Query: 121 LNR-SSSRVPRVVLPEELFVNIAVSFGAEVNRALGLLQDIACEGNLKHFLVAVVSLWAGA 180
           ++R SSS+VPRVVLPEELFVNIAVSFGAEVNR LG+LQDIACEGN KHFLVAVVSLWAGA
Sbjct: 121 MSRSSSSKVPRVVLPEELFVNIAVSFGAEVNRGLGVLQDIACEGNFKHFLVAVVSLWAGA 180

Query: 181 VISSWCNFITVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLRGHYQKLDSSVLSKIP 240
           VISSWCNFITVLYIGFVAAHTLPILYEKYEDEVDTFAYKV DQLRG YQKLDSSVLSKIP
Sbjct: 181 VISSWCNFITVLYIGFVAAHTLPILYEKYEDEVDTFAYKVIDQLRGQYQKLDSSVLSKIP 240

Query: 241 KGSFKGKKYE 250
           KGSFKGKKYE
Sbjct: 241 KGSFKGKKYE 250

[Close]

BLAST of Lcy11g006870 vs. ExPASy TrEMBL
Match: A0A1S3BT84 (Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103493007 PE=4 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 1.2e-122
Identity = 225/249 (90.36%), Postives = 237/249 (95.18%), Query Frame = 0


Query: 1   MSEKITAEDLLNNISEALAEHGQKAKSVSFFGEDSKSSSVAGQIKRILGRQKPVHHLLGG 60
           MSEK+ AEDL NNISE LAEHGQK KSVSFFGED+K+SSVAGQI RI GRQKPV++LLGG
Sbjct: 4   MSEKMIAEDLFNNISEVLAEHGQKGKSVSFFGEDNKASSVAGQINRIFGRQKPVYNLLGG 63

Query: 61  GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFIWTNASGF 120
           GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFIWTNASGF
Sbjct: 64  GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFIWTNASGF 123

Query: 121 LNRSSSRVPRVVLPEELFVNIAVSFGAEVNRALGLLQDIACEGNLKHFLVAVVSLWAGAV 180
           LNRSSS VPR+VLP+ELFVNIAV+FGAEVNRAL  LQDIACEGNLKHFLVAV+SLW GAV
Sbjct: 124 LNRSSSNVPRLVLPKELFVNIAVTFGAEVNRALCYLQDIACEGNLKHFLVAVLSLWVGAV 183

Query: 181 ISSWCNFITVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLRGHYQKLDSSVLSKIPK 240
           ISSWCNFITVLY+GFVAAHTLPILYEKYEDEVDTFAYKVFDQL GHY+K DSSVLSKIPK
Sbjct: 184 ISSWCNFITVLYVGFVAAHTLPILYEKYEDEVDTFAYKVFDQLCGHYRKFDSSVLSKIPK 243

Query: 241 GSFKGKKYE 250
           G+FKGKKYE
Sbjct: 244 GAFKGKKYE 252

[Close]

BLAST of Lcy11g006870 vs. NCBI nr
Match: XP_022136522.1 (reticulon-like protein B8 [Momordica charantia] >XP_022136523.1 reticulon-like protein B8 [Momordica charantia])

HSP 1 Score: 459.9 bits (1182), Expect = 1.4e-125
Identity = 231/249 (92.77%), Postives = 240/249 (96.39%), Query Frame = 0


Query: 1   MSEKITAEDLLNNISEALAEHGQKAKSVSFFGEDSKSSSVAGQIKRILGRQKPVHHLLGG 60
           MSEKITAED+L+NI+E LAE GQKAKSVSFFGEDSKSSSVA QI R+ GRQKPVHH+LGG
Sbjct: 1   MSEKITAEDILHNIAETLAEQGQKAKSVSFFGEDSKSSSVASQINRLFGRQKPVHHILGG 60

Query: 61  GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFIWTNASGF 120
           GKSADVLLWRNKKISASVL+GATIIWVLFEWLNYHFLTLVCFALVLGMLAQFIWTNASGF
Sbjct: 61  GKSADVLLWRNKKISASVLSGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFIWTNASGF 120

Query: 121 LNRSSSRVPRVVLPEELFVNIAVSFGAEVNRALGLLQDIACEGNLKHFLVAVVSLWAGAV 180
           +NRSSSRVPR+VLPEELFVNIAVS GAEVNRALG LQD+ACEGNLKHFLVAVVSLWAGAV
Sbjct: 121 VNRSSSRVPRLVLPEELFVNIAVSVGAEVNRALGYLQDVACEGNLKHFLVAVVSLWAGAV 180

Query: 181 ISSWCNFITVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLRGHYQKLDSSVLSKIPK 240
           ISSWCNFITVLYIGFVAAHTLPILYEKYEDEVD FAYKV DQLRGHYQKLDSSVLSKIPK
Sbjct: 181 ISSWCNFITVLYIGFVAAHTLPILYEKYEDEVDGFAYKVLDQLRGHYQKLDSSVLSKIPK 240

Query: 241 GSFKGKKYE 250
           GSFKGKKYE
Sbjct: 241 GSFKGKKYE 249

[Close]

BLAST of Lcy11g006870 vs. NCBI nr
Match: XP_038899528.1 (reticulon-like protein B8 isoform X2 [Benincasa hispida] >XP_038899535.1 reticulon-like protein B8 isoform X2 [Benincasa hispida] >XP_038899545.1 reticulon-like protein B8 isoform X2 [Benincasa hispida])

HSP 1 Score: 458.4 bits (1178), Expect = 4.0e-125
Identity = 232/249 (93.17%), Postives = 238/249 (95.58%), Query Frame = 0


Query: 1   MSEKITAEDLLNNISEALAEHGQKAKSVSFFGEDSKSSSVAGQIKRILGRQKPVHHLLGG 60
           MSEKITAEDLL+NISEALAEHGQKAKSVSFFGED+KSSSVAGQIKRI GRQKPV+HLLGG
Sbjct: 1   MSEKITAEDLLHNISEALAEHGQKAKSVSFFGEDNKSSSVAGQIKRIFGRQKPVYHLLGG 60

Query: 61  GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFIWTNASGF 120
           G+SADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTL+CFALV GMLAQFIWTNASGF
Sbjct: 61  GRSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLICFALVFGMLAQFIWTNASGF 120

Query: 121 LNRSSSRVPRVVLPEELFVNIAVSFGAEVNRALGLLQDIACEGNLKHFLVAVVSLWAGAV 180
           LNRSSS VPR+VLPEELFVNIAVSFGAEVNRAL  LQDIACEGNLKHFLVAVVSLW GAV
Sbjct: 121 LNRSSSNVPRLVLPEELFVNIAVSFGAEVNRALCFLQDIACEGNLKHFLVAVVSLWVGAV 180

Query: 181 ISSWCNFITVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLRGHYQKLDSSVLSKIPK 240
           ISSWCNFITVLYIGFVAAHTLPILYEKYEDE DTFA KVFDQL GHYQK DSSVLSKIPK
Sbjct: 181 ISSWCNFITVLYIGFVAAHTLPILYEKYEDEFDTFASKVFDQLCGHYQKFDSSVLSKIPK 240

Query: 241 GSFKGKKYE 250
           G FKGKKYE
Sbjct: 241 GGFKGKKYE 249

[Close]

BLAST of Lcy11g006870 vs. NCBI nr
Match: XP_038899522.1 (reticulon-like protein B8 isoform X1 [Benincasa hispida])

HSP 1 Score: 458.4 bits (1178), Expect = 4.0e-125
Identity = 232/249 (93.17%), Postives = 238/249 (95.58%), Query Frame = 0


Query: 1   MSEKITAEDLLNNISEALAEHGQKAKSVSFFGEDSKSSSVAGQIKRILGRQKPVHHLLGG 60
           MSEKITAEDLL+NISEALAEHGQKAKSVSFFGED+KSSSVAGQIKRI GRQKPV+HLLGG
Sbjct: 45  MSEKITAEDLLHNISEALAEHGQKAKSVSFFGEDNKSSSVAGQIKRIFGRQKPVYHLLGG 104

Query: 61  GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFIWTNASGF 120
           G+SADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTL+CFALV GMLAQFIWTNASGF
Sbjct: 105 GRSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLICFALVFGMLAQFIWTNASGF 164

Query: 121 LNRSSSRVPRVVLPEELFVNIAVSFGAEVNRALGLLQDIACEGNLKHFLVAVVSLWAGAV 180
           LNRSSS VPR+VLPEELFVNIAVSFGAEVNRAL  LQDIACEGNLKHFLVAVVSLW GAV
Sbjct: 165 LNRSSSNVPRLVLPEELFVNIAVSFGAEVNRALCFLQDIACEGNLKHFLVAVVSLWVGAV 224

Query: 181 ISSWCNFITVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLRGHYQKLDSSVLSKIPK 240
           ISSWCNFITVLYIGFVAAHTLPILYEKYEDE DTFA KVFDQL GHYQK DSSVLSKIPK
Sbjct: 225 ISSWCNFITVLYIGFVAAHTLPILYEKYEDEFDTFASKVFDQLCGHYQKFDSSVLSKIPK 284

Query: 241 GSFKGKKYE 250
           G FKGKKYE
Sbjct: 285 GGFKGKKYE 293

[Close]

BLAST of Lcy11g006870 vs. NCBI nr
Match: XP_031740165.1 (reticulon-like protein B8 isoform X1 [Cucumis sativus])

HSP 1 Score: 451.8 bits (1161), Expect = 3.8e-123
Identity = 226/249 (90.76%), Postives = 237/249 (95.18%), Query Frame = 0


Query: 1   MSEKITAEDLLNNISEALAEHGQKAKSVSFFGEDSKSSSVAGQIKRILGRQKPVHHLLGG 60
           MSEK+TAED +NNISE L EHGQK KSVSFFGEDSKSSSVAGQI RI GRQKPV++LLGG
Sbjct: 10  MSEKMTAEDFINNISEVLTEHGQKGKSVSFFGEDSKSSSVAGQINRIFGRQKPVYNLLGG 69

Query: 61  GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFIWTNASGF 120
           GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQF+WTNASGF
Sbjct: 70  GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFMWTNASGF 129

Query: 121 LNRSSSRVPRVVLPEELFVNIAVSFGAEVNRALGLLQDIACEGNLKHFLVAVVSLWAGAV 180
           LNRSSS VPR+VLP+ELFVNIAV+FGAEVNRAL  LQDIACEGNLKHFLVAVVSLW GAV
Sbjct: 130 LNRSSSNVPRLVLPKELFVNIAVTFGAEVNRALCYLQDIACEGNLKHFLVAVVSLWVGAV 189

Query: 181 ISSWCNFITVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLRGHYQKLDSSVLSKIPK 240
           ISSWCNF+TVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQL GHYQK DSSVLSKIP+
Sbjct: 190 ISSWCNFVTVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLCGHYQKFDSSVLSKIPR 249

Query: 241 GSFKGKKYE 250
           G+FKGKKYE
Sbjct: 250 GAFKGKKYE 258

[Close]

BLAST of Lcy11g006870 vs. NCBI nr
Match: XP_011653261.1 (reticulon-like protein B8 isoform X2 [Cucumis sativus] >XP_011653262.1 reticulon-like protein B8 isoform X2 [Cucumis sativus] >KGN53509.1 hypothetical protein Csa_015076 [Cucumis sativus])

HSP 1 Score: 451.8 bits (1161), Expect = 3.8e-123
Identity = 226/249 (90.76%), Postives = 237/249 (95.18%), Query Frame = 0


Query: 1   MSEKITAEDLLNNISEALAEHGQKAKSVSFFGEDSKSSSVAGQIKRILGRQKPVHHLLGG 60
           MSEK+TAED +NNISE L EHGQK KSVSFFGEDSKSSSVAGQI RI GRQKPV++LLGG
Sbjct: 1   MSEKMTAEDFINNISEVLTEHGQKGKSVSFFGEDSKSSSVAGQINRIFGRQKPVYNLLGG 60

Query: 61  GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFIWTNASGF 120
           GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQF+WTNASGF
Sbjct: 61  GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFMWTNASGF 120

Query: 121 LNRSSSRVPRVVLPEELFVNIAVSFGAEVNRALGLLQDIACEGNLKHFLVAVVSLWAGAV 180
           LNRSSS VPR+VLP+ELFVNIAV+FGAEVNRAL  LQDIACEGNLKHFLVAVVSLW GAV
Sbjct: 121 LNRSSSNVPRLVLPKELFVNIAVTFGAEVNRALCYLQDIACEGNLKHFLVAVVSLWVGAV 180

Query: 181 ISSWCNFITVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLRGHYQKLDSSVLSKIPK 240
           ISSWCNF+TVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQL GHYQK DSSVLSKIP+
Sbjct: 181 ISSWCNFVTVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLCGHYQKFDSSVLSKIPR 240

Query: 241 GSFKGKKYE 250
           G+FKGKKYE
Sbjct: 241 GAFKGKKYE 249

[Close]

BLAST of Lcy11g006870 vs. TAIR 10
Match: AT3G10260.1 (Reticulon family protein )

HSP 1 Score: 306.2 bits (783), Expect = 2.4e-83
Identity = 149/249 (59.84%), Postives = 189/249 (75.90%), Query Frame = 0


Query: 1   MSEKITAEDLLNNISEALAEHGQKAKSVSFFGEDSKSSSVAGQIKRILGRQKPVHHLLGG 60
           M +K   ED++ ++ +   E  QK K  S F E  +  SV+ +  R+  RQKP+HH+LGG
Sbjct: 1   MPDKNIVEDVIGDLVDNFTETVQKNKHGSSFFE--QEDSVSSRFNRLFDRQKPIHHVLGG 60

Query: 61  GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFIWTNASGF 120
           GKSADVLLWRNKKISASVL GAT IWVLFEW+N+HFL+LVC+AL+LGM+AQF+W+NASGF
Sbjct: 61  GKSADVLLWRNKKISASVLMGATAIWVLFEWINFHFLSLVCYALLLGMIAQFVWSNASGF 120

Query: 121 LNRSSSRVPRVVLPEELFVNIAVSFGAEVNRALGLLQDIACEGNLKHFLVAVVSLWAGAV 180
           LNRS SRVPR+VLP++ F  + V+ G EVNR L  LQD+AC+GNLK FL+AV+ LW  A+
Sbjct: 121 LNRSQSRVPRLVLPKDFFAEVGVAVGKEVNRGLLFLQDLACKGNLKQFLMAVIGLWVAAM 180

Query: 181 ISSWCNFITVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLRGHYQKLDSSVLSKIPK 240
           + S CNF+TVLYIGFV AHT+P+LYE+YEDEVD F   +  +   HY+KLD+  LS+IP 
Sbjct: 181 VGSCCNFLTVLYIGFVGAHTMPVLYERYEDEVDGFMDSMIMKFHSHYKKLDTGFLSRIPS 240

Query: 241 GSFKGKKYE 250
           G F  KK E
Sbjct: 241 GKFGLKKRE 247

[Close]

BLAST of Lcy11g006870 vs. TAIR 10
Match: AT3G10260.2 (Reticulon family protein )

HSP 1 Score: 306.2 bits (783), Expect = 2.4e-83
Identity = 149/249 (59.84%), Postives = 189/249 (75.90%), Query Frame = 0


Query: 1   MSEKITAEDLLNNISEALAEHGQKAKSVSFFGEDSKSSSVAGQIKRILGRQKPVHHLLGG 60
           M +K   ED++ ++ +   E  QK K  S F E  +  SV+ +  R+  RQKP+HH+LGG
Sbjct: 1   MPDKNIVEDVIGDLVDNFTETVQKNKHGSSFFE--QEDSVSSRFNRLFDRQKPIHHVLGG 60

Query: 61  GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFIWTNASGF 120
           GKSADVLLWRNKKISASVL GAT IWVLFEW+N+HFL+LVC+AL+LGM+AQF+W+NASGF
Sbjct: 61  GKSADVLLWRNKKISASVLMGATAIWVLFEWINFHFLSLVCYALLLGMIAQFVWSNASGF 120

Query: 121 LNRSSSRVPRVVLPEELFVNIAVSFGAEVNRALGLLQDIACEGNLKHFLVAVVSLWAGAV 180
           LNRS SRVPR+VLP++ F  + V+ G EVNR L  LQD+AC+GNLK FL+AV+ LW  A+
Sbjct: 121 LNRSQSRVPRLVLPKDFFAEVGVAVGKEVNRGLLFLQDLACKGNLKQFLMAVIGLWVAAM 180

Query: 181 ISSWCNFITVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLRGHYQKLDSSVLSKIPK 240
           + S CNF+TVLYIGFV AHT+P+LYE+YEDEVD F   +  +   HY+KLD+  LS+IP 
Sbjct: 181 VGSCCNFLTVLYIGFVGAHTMPVLYERYEDEVDGFMDSMIMKFHSHYKKLDTGFLSRIPS 240

Query: 241 GSFKGKKYE 250
           G F  KK E
Sbjct: 241 GKFGLKKRE 247

[Close]

BLAST of Lcy11g006870 vs. TAIR 10
Match: AT3G10260.3 (Reticulon family protein )

HSP 1 Score: 306.2 bits (783), Expect = 2.4e-83
Identity = 149/249 (59.84%), Postives = 189/249 (75.90%), Query Frame = 0


Query: 1   MSEKITAEDLLNNISEALAEHGQKAKSVSFFGEDSKSSSVAGQIKRILGRQKPVHHLLGG 60
           M +K   ED++ ++ +   E  QK K  S F E  +  SV+ +  R+  RQKP+HH+LGG
Sbjct: 21  MPDKNIVEDVIGDLVDNFTETVQKNKHGSSFFE--QEDSVSSRFNRLFDRQKPIHHVLGG 80

Query: 61  GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFIWTNASGF 120
           GKSADVLLWRNKKISASVL GAT IWVLFEW+N+HFL+LVC+AL+LGM+AQF+W+NASGF
Sbjct: 81  GKSADVLLWRNKKISASVLMGATAIWVLFEWINFHFLSLVCYALLLGMIAQFVWSNASGF 140

Query: 121 LNRSSSRVPRVVLPEELFVNIAVSFGAEVNRALGLLQDIACEGNLKHFLVAVVSLWAGAV 180
           LNRS SRVPR+VLP++ F  + V+ G EVNR L  LQD+AC+GNLK FL+AV+ LW  A+
Sbjct: 141 LNRSQSRVPRLVLPKDFFAEVGVAVGKEVNRGLLFLQDLACKGNLKQFLMAVIGLWVAAM 200

Query: 181 ISSWCNFITVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLRGHYQKLDSSVLSKIPK 240
           + S CNF+TVLYIGFV AHT+P+LYE+YEDEVD F   +  +   HY+KLD+  LS+IP 
Sbjct: 201 VGSCCNFLTVLYIGFVGAHTMPVLYERYEDEVDGFMDSMIMKFHSHYKKLDTGFLSRIPS 260

Query: 241 GSFKGKKYE 250
           G F  KK E
Sbjct: 261 GKFGLKKRE 267

[Close]

BLAST of Lcy11g006870 vs. TAIR 10
Match: AT2G46170.1 (Reticulon family protein )

HSP 1 Score: 217.2 bits (552), Expect = 1.5e-56
Identity = 110/241 (45.64%), Postives = 157/241 (65.15%), Query Frame = 0


Query: 6   TAEDLLNNISEALAEHGQKAKSVSFFGEDSKSSSVAGQIKRILGRQKPVHHLLGGGKSAD 65
           T E L+  ISE +  H   + S S + +    S+V  +I R+ GR+KPVH +LGGGK AD
Sbjct: 11  TEESLMEKISEKIHHHDSSSSSESEYEKPDSPSAVKAKIYRMFGREKPVHKVLGGGKPAD 70

Query: 66  VLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFIWTNASGFLNRSS 125
           V LWR+KK+S +VL  AT IWVLFE + YH L+L+C   +L +   F+W+NA   +N++S
Sbjct: 71  VFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWSNAHTLINKTS 130

Query: 126 SRVPRVVLPEELFVNIAVSFGAEVNRALGLLQDIACEGNLKHFLVAVVSLWAGAVISSWC 185
            ++P + +PEE F+ +A S   E+N+A  +L+ IA   +LK FL+ VV LW  +V+ +W 
Sbjct: 131 PQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGLWIISVVGNWF 190

Query: 186 NFITVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLRGHYQKLDSSVLSKIPKGSFKG 245
           NF+T++YI FV  HT+P+LYEK+ED+VD  A K   +L+  Y   D  VLSKIP  S K 
Sbjct: 191 NFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDEKVLSKIPIASLKA 250

Query: 246 K 247
           K
Sbjct: 251 K 251

[Close]

BLAST of Lcy11g006870 vs. TAIR 10
Match: AT3G61560.1 (Reticulon family protein )

HSP 1 Score: 211.1 bits (536), Expect = 1.0e-54
Identity = 106/239 (44.35%), Postives = 155/239 (64.85%), Query Frame = 0


Query: 8   EDLLNNISEALAEHGQKAKSVSFFGEDSKSSSVAGQIKRILGRQKPVHHLLGGGKSADVL 67
           E L+  I++ + +H   + S S   +    S++  +I R+ GR+KPVH +LGGG  ADV 
Sbjct: 13  ESLMEKIADKIHDHDSSSSSDSEHEKPESPSALKAKIYRLFGREKPVHKVLGGGLPADVF 72

Query: 68  LWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFIWTNASGFLNRSSSR 127
           LWR+KK+SASVL  AT IWVLFE + YHFL+LVC  L+  + A F+ +NA  F+N++  +
Sbjct: 73  LWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALAALFLLSNAHAFMNKTPPK 132

Query: 128 VPRVVLPEELFVNIAVSFGAEVNRALGLLQDIACEGNLKHFLVAVVSLWAGAVISSWCNF 187
           +P + + EE F+ I  +   E+N+A  +L+ IA   +LK FL+ V  LW  +V+ +W NF
Sbjct: 133 IPEIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLKKFLMVVFGLWIISVVGNWFNF 192

Query: 188 ITVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLRGHYQKLDSSVLSKIPKGSFKGK 247
           +T++YI FV  HT+P+LYEK+ED+VD  A K   +L+ HY   D  VLSK+P  S K K
Sbjct: 193 LTLVYICFVVLHTVPMLYEKHEDKVDPVAEKTLKELKKHYMVFDEKVLSKLPVASLKAK 251

The following BLAST results are available for this feature:

BLAST of Lcy11g006870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SS37	3.3e-82	59.84	Reticulon-like protein B8 OS=Arabidopsis thaliana OX=3702 GN=RTNLB8 PE=2 SV=1	[more]
O82352	2.0e-55	45.64	Reticulon-like protein B5 OS=Arabidopsis thaliana OX=3702 GN=RTNLB5 PE=1 SV=1	[more]
Q6DBN4	1.5e-53	44.35	Reticulon-like protein B6 OS=Arabidopsis thaliana OX=3702 GN=RTNLB6 PE=1 SV=1	[more]
Q9SUR3	2.3e-51	40.63	Reticulon-like protein B1 OS=Arabidopsis thaliana OX=3702 GN=RTNLB1 PE=1 SV=1	[more]
Q9SH59	4.0e-51	41.67	Reticulon-like protein B3 OS=Arabidopsis thaliana OX=3702 GN=RTNLB3 PE=2 SV=1	[more]

BLAST of Lcy11g006870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C5Q7	6.7e-126	92.77	Reticulon-like protein OS=Momordica charantia OX=3673 GN=LOC111008204 PE=4 SV=1	[more]
A0A0A0KXG6	1.8e-123	90.76	Reticulon-like protein OS=Cucumis sativus OX=3659 GN=Csa_4G063430 PE=4 SV=1	[more]
A0A6J1J2L8	2.4e-123	90.44	Reticulon-like protein OS=Cucurbita maxima OX=3661 GN=LOC111481251 PE=4 SV=1	[more]
A0A6J1FQS5	3.1e-123	90.80	Reticulon-like protein OS=Cucurbita moschata OX=3662 GN=LOC111447930 PE=4 SV=1	[more]
A0A1S3BT84	1.2e-122	90.36	Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103493007 PE=4 SV=1	[more]

BLAST of Lcy11g006870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022136522.1	1.4e-125	92.77	reticulon-like protein B8 [Momordica charantia] >XP_022136523.1 reticulon-like p...	[more]
XP_038899528.1	4.0e-125	93.17	reticulon-like protein B8 isoform X2 [Benincasa hispida] >XP_038899535.1 reticul...	[more]
XP_038899522.1	4.0e-125	93.17	reticulon-like protein B8 isoform X1 [Benincasa hispida]	[more]
XP_031740165.1	3.8e-123	90.76	reticulon-like protein B8 isoform X1 [Cucumis sativus]	[more]
XP_011653261.1	3.8e-123	90.76	reticulon-like protein B8 isoform X2 [Cucumis sativus] >XP_011653262.1 reticulon...	[more]

BLAST of Lcy11g006870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G10260.1	2.4e-83	59.84	Reticulon family protein	[more]
AT3G10260.2	2.4e-83	59.84	Reticulon family protein	[more]
AT3G10260.3	2.4e-83	59.84	Reticulon family protein	[more]
AT2G46170.1	1.5e-56	45.64	Reticulon family protein	[more]
AT3G61560.1	1.0e-54	44.35	Reticulon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003388	Reticulon	PFAM	PF02453	Reticulon	coord: 64..218 e-value: 1.5E-51 score: 174.4
IPR003388	Reticulon	PROSITE	PS50845	RETICULON	coord: 63..249 score: 45.090576
IPR045064	Reticulon-like protein, plant	PANTHER	PTHR10994	RETICULON	coord: 1..249
None	No IPR available	PANTHER	PTHR10994:SF173	RETICULON-LIKE PROTEIN B8	coord: 1..249

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g006870.1	Lcy11g006870.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009617	response to bacterium
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane