Lcy11g006720 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy11g006720
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	protein Iojap, chloroplastic
Location	Chr11: 6844842 .. 6849756 (-)
RNA-Seq Expression	Lcy11g006720
Synteny	Lcy11g006720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAACTTCAAATAAACAATTTTTTTTTGAAAAAATTCTTATCGAGTTTCATACATGAAAATGCGACAATTAGATTTCATTTGACAAATCTACACTTGCTTCTTCGTTTAAAAATATCTTCCCTCACGGCGTACGGTTCTTCCTTTCGTGACGGAAGGAACCAGCATGGTGTTATCCACTATCTTATCTCTTCACAGCACCGGCGCCGGGACCTCCTTCGGCGGCGAGCTCCGGCAACTGGGTTACGATTATTTCAGAGTTTCTCGAAAACCCAGAAAGCAATTTTTGTCTTCATGCTGGAATGGGTCCCTTTTTCCATACCAAAACTGCATTTGGAAGACACCCTCTTCCAATAACTTCCATTTGAAGTCAATGGAGTCTTCGCCACTGTTCGCCGTCGGAGGAGAAGCTGAAGATGGCTTTCTATCGGTATTGCGTTTTGATTTCTTTTGTTTTGAACTTTTAGAATCAATTTGGATCATGTTTCGTTGATGTGTTTGGAAGAGATTTGATTCCACTTGCTGATTGTTGTGCGATTTCTGGGTTTTCATTGAGGGACAACTAGATGGATCGAAATGTTATCTATATTGTCGTTTAAAATGGAAGTTATTTGCTAAAAGAAAAGAGGCCTCTCTCTATCTCTCTCTTTTTTTACCTTTTCCTTTGATTTTTGGAAGCTGAAGCTACTTGGGATTCTAGGAAGAACCTTATCTAAATGAAATGTGTTTGCAAAAAGAAAAAGAAGCCCATCTCTCTCTCTCTCTATCTCCCCTTTTCCTCTGATTTTTGAATGCTGCAGCTATTTGGGAATTGGAAGAATCTTATCAAAATGAAAGTAATTTGCAAAAGGAAAAGAAGCCCCTCTCTCTCTCTGATCTTTGGATGATGCAGCTACTTTAGAGGAGCTGTATCAAAGTGAAAGTTTTAAAAGAGGAAAGAAGCTTCTCTCTCTTTCTCTCTCCTGGAGTTTTTCTTAGTAATGGTGGGATTGAGTTACTTTGAACTGTATTAGTCGGTCCTAAAAGGTCAATCCCATTTACTTCTTGTACAAAAGAAGCAGGAAACTGAAGATCGAAGATGCTGAATCCAAGCCACTCATTTCTGTTGTTTTGGAACTTGTATCTTCATTTGCTTGCTAATCTTCAAAGGAAAATCAAGATCATGATAATTTTTGACTCCAAAACGAGTTCTGATTTCATGTAAAGGAAAAATGGCTAATCAAACCGATTTATACAAATTTTGGATGTCACTTGTTAGGCCATTTATAATCGCCAAAGAATGGAGACTTTGATGTGTTTTTAGTTCACCTATGGGAATGTCTAATATTTTTGTTGTAATTGTGTATTACTGCATCTGCTTGTCACATCGATTGACCCAGTCAATCCTTTCTGGCAGAATATGAATGATGATACCGACAATATGTATGATGATTTGTTCAAGAAATATGGGAATGTGGTATTCAAGAGCAACGATCAAAAGCTTCTTAGTGCAGAAGTCGATGATGATGCGGAAAGCCTTTCATGTAAGCTTCTCTTGTCATTAGCTCTACAAGAAACAGACATAAGTTTGTTGTGGCTTAATGTGTTGTGTTCATGTTGTGTTTTGACTGCTAAATAGTCTGCTTCATCTGTGAGTGTTAAATCACCAATGAACCAAAAGCTTAAGCTGATGGGTTAGGGTAAATTTAATTATATTAATATTCTAAGACCCCCTCACTTGTGGGCTTGGAAATTTGTAGAGGGCCTAACAAGAAACTCCACACCGAACGGGCAAACTGGCAATTCCAAAGGATATGGTCCAAATCTTCCTCTGCCTTCTGACATAAGATGCAACAAAACGGGCCAACTAAACAAGTGGAAATCAATATTAATTGAAGGAGGAAATGATATTACAAGAGTTTGAACTCAGGACCTCATACTCTGATACCATGTTAAATCACCCATGAACCCAAAAGCTTAAGCTGATGGGTTAGGATAAATTTAATTATATCAATATTCTAACAATGAGTAAAATGAGTAGTTTTAGCTAATTTATCTTAACTTGATAAGATTTTCTATAATGTAATTGTGAGGTAGTTAAATGAAAGGAAGGGAACAATCTTATCATCTTTGGTTGAACCAATAACAAAAATGGGAAGTGGGATGGAAAGAGTTATTTCCTTTGCATTGCCAGATTTTTTTTTTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATCTCATCTCATTTGATCTGGAATGGTTACATACAAATTACCTATCTTTTCAAAAGCAAGTGTAGGTCATCGAATTTGTCGAGTGTTACTTTCAATCGAAAAGGAGAGAGTTCATATTCATCATGAAGGAATTGAATAAGCCTTTGTAAAAGTTAAAATGAGTATAGCTTAACGGTAATTGACATGTACCTTCAACCAAGAGGTTTGAGGTTTGACGAATCCCCCCACTTTCAAAATGTTATTGAACTCACAAAAATAAGCCTTTGTAAAACGGTTACACCCCATTATCTCAAGTTTTCTAGAAATAAAAAGAAAAATAACTAGTCATTAGATTGAACCAATAATCATCACATTGCTTTGAATCTGACTTGTAAGCCCAATATCTTTTCTTTTAGAACTAAATCCACAAGCTTCTACTCATGAATGAACGATTGGTACTTAATACATGCATGTAGTATTCACACGTATCTTATGAATTCAAAACTCTAGTTACATGGAACAGTTGGTCAACTAATAATTCAATGCTTCTCTACAGTTGCTGTGTCAATGGCGAAAGTTGCAAGTGATGTGAAGGCTGCAGATATCCGGGTTCTATTTGTGAAACCTCTAGTTTACTGGACCAGATTTTTCATCATTGCAACGGCGTTTTCTCGTCCTCAAATCGACGCTATAGGGTACTGCTTCTTTTTTGGTTTATTGTCCTCTTACTGCTTGCAATAACGAAAATTGGACTCTGCATACAAAGGTATTGCTTAAACTCACTGTTCAAGTGTATTTTGCAATGCAGATCCCGGATAAGAGACCTCGCGGAGAAGAAGTATGGAAGAAGTCCTTCCGGTGATGTGAAGCCAAATTCCTGGACTTTATTGGATTTTGGTATGCATTATTTGCTTTTTAATCTGTTCTTTTTAATATAGGATACATGTGTTTCGTTATAGAAGATGAAAGCACAAGAGACTGGGATAGGAACCAATCAGAAAGAAACGACTTATGCTAAACTAATAGCTTTACTAAAACATGTTATATGCCTCTCTCTTTCTCTCTTAATGAAAATCAGGCTTTCATTAAGACAGTGAGAAAATACAAATAAACTATACAAAAAAGAAAAAAAAGCCTACAAAAGACAAAATGAGCCTGTACAAAGAAAACAGAGATCAGAGAAACTAAAAAAGCAAAAGTTCCTGTTGATAGGAATACAAGACAAAAGGATAGTTACAAAAGTCCTTATAAACTGACTCCCAACAGAGGAGGTATATTCTCAGTGGTAAAGGATAAAACTTCAAAATTTAATGTTGTTGTCTATTAAAAGGTGTGACTTTGGTGTTAATGACTTGGGATGTTTGGAAATATCCTTCTAGGTACTGGGTTTAAGCTCTTCTGTTGGATGTTTCTCGAAGCGGGTTTTGGAGTGAGAAAAGCTTTTTTGAGATTTAGTAGGGTGGATCATGAACATAATGCAAGTAGTGAGGCCATTTGATACCCCATTTATATATATATAATCTGTTGAATATGTCCACAGGGAAGGTCTGTAGTCCATTATAGTCTAAACTTATACTCAAATGTGATTTTTCATCTGTTAATATCTTCATCTACCATAGAGTGGATGACTTATAGACTTTTAGTATTATTATTATTATTTTATTTGAGTTCAACAGCATCCAGGGGTGAGAATTCAAACCTATGACCTTTTGGTCGAGGATATGATGTCTTAATTAGTTAAGCTAGGCTCAGTTGACTTCTAAACCACTTTATAACTATAGGATCATTTCATAATCGGCTTATTATTGGTGTTGGTAGGCCATTTTTCCATATCACACGGTAGACAAATCCAAATTTAATGATCAAATCAAGTATGCCACTTCAAAACAAAAAGCTTGGATTTAACTACATTCTTAGAGATGGAGAAGCTGAATTTCAACTCTCCAACTTCGTTTTGGAATTAGGGTAAAATATTACTCCAAAACGATCATCGACCGATCTTTGATACCGATGAACTAAGAAACCAAATTGCCCTGATGTTTTTGTTCTCAGGAGATGTGGTCATCCATATTTTTCTACCCCAGCAAAGAGCATTCTACAACTTGGAAGAGTTCTATGGCAATGCAACTCCCGTGGAGCTACCATTCGAAAACCAACGGCCATTTTGAAGTGAAAACCGCTTCCGATTTATTCCCGAACAGGTGATGCTGAAGGAAACAGCTGGTGTGAGGCAGATTGCTTCTGTTTGTTGTTTCCTCTCATCAAAGCAGCTACCATGTGAAGTGTTGCAGGAGCAGCTGCATGAATTGGGAGTTCCAACTTCTGACTGCTTGAGGTTGAAGACAGAATCACTTGGCAGATGGTGGTGTTATGAAAGCCCTATCCCAAAGTTTCTCCTGTCCCCCAACTCTCTCTCTCTTTCTCTCTCTCATGAATGACTGGTCTGATGTGAGATAGTTTGCAAGTAAAAAGTTAGTTGTTATGAATCAAGTTGCATAGAAGGGCCATTTTACTTGGAAGAGTGCATTAAGATTCCATTCACTAAATGGGAAAGTTTGTAGGAGAATTAAAATGAAATTGGTTTGATCAAGTATTAAATTTGAACTTCTTGTGTTATTAGGATTAGAGAATTTCCATCCATACCGTTGTCTTGTAAAATCTATAGTTAAAACTCAGAGAAAATTGAAGTAAAATGATGAGGG

mRNA sequence

AAAAACTTCAAATAAACAATTTTTTTTTGAAAAAATTCTTATCGAGTTTCATACATGAAAATGCGACAATTAGATTTCATTTGACAAATCTACACTTGCTTCTTCGTTTAAAAATATCTTCCCTCACGGCGTACGGTTCTTCCTTTCGTGACGGAAGGAACCAGCATGGTGTTATCCACTATCTTATCTCTTCACAGCACCGGCGCCGGGACCTCCTTCGGCGGCGAGCTCCGGCAACTGGGTTACGATTATTTCAGAGTTTCTCGAAAACCCAGAAAGCAATTTTTGTCTTCATGCTGGAATGGGTCCCTTTTTCCATACCAAAACTGCATTTGGAAGACACCCTCTTCCAATAACTTCCATTTGAAGTCAATGGAGTCTTCGCCACTGTTCGCCGTCGGAGGAGAAGCTGAAGATGGCTTTCTATCGAATATGAATGATGATACCGACAATATGTATGATGATTTGTTCAAGAAATATGGGAATGTGGTATTCAAGAGCAACGATCAAAAGCTTCTTAGTGCAGAAGTCGATGATGATGCGGAAAGCCTTTCATTTGCTGTGTCAATGGCGAAAGTTGCAAGTGATGTGAAGGCTGCAGATATCCGGGTTCTATTTGTGAAACCTCTAGTTTACTGGACCAGATTTTTCATCATTGCAACGGCGTTTTCTCGTCCTCAAATCGACGCTATAGGATCCCGGATAAGAGACCTCGCGGAGAAGAAGTATGGAAGAAGTCCTTCCGGTGATGTGAAGCCAAATTCCTGGACTTTATTGGATTTTGGAGATGTGGTCATCCATATTTTTCTACCCCAGCAAAGAGCATTCTACAACTTGGAAGAGTTCTATGGCAATGCAACTCCCGTGGAGCTACCATTCGAAAACCAACGGCCATTTTGAAGTGAAAACCGCTTCCGATTTATTCCCGAACAGGTGATGCTGAAGGAAACAGCTGGTGTGAGGCAGATTGCTTCTGTTTGTTGTTTCCTCTCATCAAAGCAGCTACCATGTGAAGTGTTGCAGGAGCAGCTGCATGAATTGGGAGTTCCAACTTCTGACTGCTTGAGGTTGAAGACAGAATCACTTGGCAGATGGTGGTGTTATGAAAGCCCTATCCCAAAGTTTCTCCTGTCCCCCAACTCTCTCTCTCTTTCTCTCTCTCATGAATGACTGGTCTGATGTGAGATAGTTTGCAAGTAAAAAGTTAGTTGTTATGAATCAAGTTGCATAGAAGGGCCATTTTACTTGGAAGAGTGCATTAAGATTCCATTCACTAAATGGGAAAGTTTGTAGGAGAATTAAAATGAAATTGGTTTGATCAAGTATTAAATTTGAACTTCTTGTGTTATTAGGATTAGAGAATTTCCATCCATACCGTTGTCTTGTAAAATCTATAGTTAAAACTCAGAGAAAATTGAAGTAAAATGATGAGGG

Coding sequence (CDS)

ATGGTGTTATCCACTATCTTATCTCTTCACAGCACCGGCGCCGGGACCTCCTTCGGCGGCGAGCTCCGGCAACTGGGTTACGATTATTTCAGAGTTTCTCGAAAACCCAGAAAGCAATTTTTGTCTTCATGCTGGAATGGGTCCCTTTTTCCATACCAAAACTGCATTTGGAAGACACCCTCTTCCAATAACTTCCATTTGAAGTCAATGGAGTCTTCGCCACTGTTCGCCGTCGGAGGAGAAGCTGAAGATGGCTTTCTATCGAATATGAATGATGATACCGACAATATGTATGATGATTTGTTCAAGAAATATGGGAATGTGGTATTCAAGAGCAACGATCAAAAGCTTCTTAGTGCAGAAGTCGATGATGATGCGGAAAGCCTTTCATTTGCTGTGTCAATGGCGAAAGTTGCAAGTGATGTGAAGGCTGCAGATATCCGGGTTCTATTTGTGAAACCTCTAGTTTACTGGACCAGATTTTTCATCATTGCAACGGCGTTTTCTCGTCCTCAAATCGACGCTATAGGATCCCGGATAAGAGACCTCGCGGAGAAGAAGTATGGAAGAAGTCCTTCCGGTGATGTGAAGCCAAATTCCTGGACTTTATTGGATTTTGGAGATGTGGTCATCCATATTTTTCTACCCCAGCAAAGAGCATTCTACAACTTGGAAGAGTTCTATGGCAATGCAACTCCCGTGGAGCTACCATTCGAAAACCAACGGCCATTTTGA

Protein sequence

MVLSTILSLHSTGAGTSFGGELRQLGYDYFRVSRKPRKQFLSSCWNGSLFPYQNCIWKTPSSNNFHLKSMESSPLFAVGGEAEDGFLSNMNDDTDNMYDDLFKKYGNVVFKSNDQKLLSAEVDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRIRDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFENQRPF

Homology

[Close]

BLAST of Lcy11g006720 vs. ExPASy Swiss-Prot
Match: Q9LDY9 (Protein Iojap, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=IJ PE=2 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 7.1e-77
Identity = 154/232 (66.38%), Postives = 174/232 (75.00%), Query Frame = 0


Query: 12  TGAGTSFGGELRQLGYDYFRVSRKPRK--QFLSSCWNGSLFPYQNCIWKTPSSNNFHLKS 71
           T AG    G+ R         S  PRK    LS   N  L    NC W+   S    L S
Sbjct: 8   TVAGALLAGDFRLPAVS----SLIPRKTSSSLSCLSNRDLSSPYNCCWRL--SRGKILTS 67

Query: 72  MESSPLFAVGGEAEDGFLSNMNDDTDNMYDDLFKKYGNVVFKSNDQKLLSAEVDDDAESL 131
           + +S  FAVG EAEDGFLSN+++DTD M+DDLF KYG VVF+S D K  +AEVDDDAESL
Sbjct: 68  LSNSRKFAVGKEAEDGFLSNVSEDTDEMFDDLFNKYGKVVFRSTDVKSPTAEVDDDAESL 127

Query: 132 SFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRIRDLAEKKYG 191
           +FAV +AKVASDVKA DI+VLFVKPLVYWTRFFIIATAFSRPQIDAIGSR+RDLAEKKYG
Sbjct: 128 AFAVELAKVASDVKAGDIKVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRMRDLAEKKYG 187

Query: 192 RSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFENQ 242
           +  +GDVKPNSWTLLDFGDVVIH+FLP QR FYNLE+FYGNA  +ELPFE+Q
Sbjct: 188 KVANGDVKPNSWTLLDFGDVVIHLFLPPQRTFYNLEDFYGNAMQIELPFEDQ 233

[Close]

BLAST of Lcy11g006720 vs. ExPASy Swiss-Prot
Match: Q41822 (Protein Iojap, chloroplastic OS=Zea mays OX=4577 GN=Ij PE=1 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 2.0e-55
Identity = 106/159 (66.67%), Postives = 126/159 (79.25%), Query Frame = 0


Query: 88  SNMN----DDTDNMYDDLFKKYGNVVFKSNDQKLLSAEVDDDAESLSFAVSMAKVASDVK 147
           SN+N    DD D + +DL K++G VV+ S      + E DDDAE LSFAVS+AK AS++K
Sbjct: 69  SNVNFGRGDDADKLLEDLLKQHGEVVYSSGGPPDPTVEADDDAECLSFAVSLAKAASEIK 128

Query: 148 AADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRIRDLAEKKYGRSPSGDVKPNSWTL 207
           A DIRVL V+ LVYWTRFFII TAFS  QIDAI S++RD+ EK++ +  SGD KPNSWTL
Sbjct: 129 ATDIRVLCVRRLVYWTRFFIILTAFSNAQIDAISSKMRDIGEKQFSKVASGDTKPNSWTL 188

Query: 208 LDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFENQR 243
           LDFGDVV+HIFLPQQRAFYNLEEFYGNATP+ELPF+ QR
Sbjct: 189 LDFGDVVVHIFLPQQRAFYNLEEFYGNATPIELPFDTQR 227

[Close]

BLAST of Lcy11g006720 vs. ExPASy Swiss-Prot
Match: P73658 (Ribosomal silencing factor RsfS OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=rsfS PE=1 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.7e-14
Identity = 41/101 (40.59%), Postives = 62/101 (61.39%), Query Frame = 0


Query: 134 SMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRIRDLAEKKYGRSPS 193
           ++A+ A + KA D+ +L V  + Y   +F+I T FSR Q+ AI   I    E  +G+ P+
Sbjct: 33  TIAQAAEERKAGDLVILKVTDVSYLADYFVICTGFSRTQVRAIADNIEKQVELVHGQLPT 92

Query: 194 GDVKPNS---WTLLDFGDVVIHIFLPQQRAFYNLEEFYGNA 232
              + NS   W L DFGDV++H F+P++R FY LE F+G+A
Sbjct: 93  -HTEGNSESIWVLQDFGDVLVHTFMPEEREFYKLEAFWGHA 132

[Close]

BLAST of Lcy11g006720 vs. ExPASy Swiss-Prot
Match: Q97P97 (Ribosomal silencing factor RsfS OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) OX=170187 GN=rsfS PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 4.4e-10
Identity = 38/104 (36.54%), Postives = 59/104 (56.73%), Query Frame = 0


Query: 135 MAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRIRD-LAEKKY-GRSP 194
           + K A + +A DI  L V+ L   T + +I ++ +  Q+DAI + IR+ +A+  + G   
Sbjct: 10  VVKAADEKRAEDILALDVQDLTSVTDYLVITSSMNSRQLDAIAANIREKVAQAGFKGSHV 69

Query: 195 SGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVEL 237
            GD     W LLD G VV+HIF  + RA YNLE+ +  A  V++
Sbjct: 70  EGDA-AGGWVLLDLGAVVVHIFSEEMRAHYNLEKLWHEANSVDI 112

[Close]

BLAST of Lcy11g006720 vs. ExPASy Swiss-Prot
Match: Q9KD89 (Ribosomal silencing factor RsfS OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=rsfS PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 6.3e-09
Identity = 38/111 (34.23%), Postives = 57/111 (51.35%), Query Frame = 0


Query: 127 ESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRIRDLA-E 186
           E L  AV+      D KA  +  L +K +     FF+I    S  Q+ AI   ++ +A E
Sbjct: 5   ELLQLAVN---AVDDKKAEQVVALNMKGISLIADFFLICHGNSEKQVQAIAHELKKVAQE 64

Query: 187 KKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVEL 237
           +          +   W L+D GDVV+H+F   +RA+YNLE+ +G+A  VEL
Sbjct: 65  QGIEIKRLEGYEQARWVLIDLGDVVVHVFHKDERAYYNLEKLWGDAPTVEL 112

[Close]

BLAST of Lcy11g006720 vs. ExPASy TrEMBL
Match: A0A0A0KVG5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G064060 PE=3 SV=1)

HSP 1 Score: 448.7 bits (1153), Expect = 1.5e-122
Identity = 217/244 (88.93%), Postives = 228/244 (93.44%), Query Frame = 0


Query: 1   MVLSTILSLHSTGAGTSFGGELRQLGYDYFRVSRKPRKQFLSSCWNGSLFPYQNCIWKTP 60
           M LST LSLH  GAGT FG ELRQLG+DYF V ++PRKQ   SCWNGS FPY+NC+W+ P
Sbjct: 1   MALSTTLSLHGAGAGTLFGAELRQLGHDYFGVFKRPRKQIFCSCWNGSPFPYRNCLWRVP 60

Query: 61  SSNNFHLKSMESSPLFAVGGEAEDGFLSNMNDDTDNMYDDLFKKYGNVVFKSNDQKLLSA 120
           S NNFHLKSMESSPLFAVGGEAEDGFLSNMND+TD+MYD+LFKKYGNVVFKSNDQK  SA
Sbjct: 61  SVNNFHLKSMESSPLFAVGGEAEDGFLSNMNDETDDMYDELFKKYGNVVFKSNDQKPPSA 120

Query: 121 EVDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180
           E+DDD+ESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI
Sbjct: 121 EIDDDSESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180

Query: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240
           RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN
Sbjct: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240

Query: 241 QRPF 245
           QRPF
Sbjct: 241 QRPF 244

[Close]

BLAST of Lcy11g006720 vs. ExPASy TrEMBL
Match: A0A5A7V7J6 (Oligomerization domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G00520 PE=3 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 6.3e-121
Identity = 216/244 (88.52%), Postives = 228/244 (93.44%), Query Frame = 0


Query: 1   MVLSTILSLHSTGAGTSFGGELRQLGYDYFRVSRKPRKQFLSSCWNGSLFPYQNCIWKTP 60
           M LST LSLH  GAGT FGGEL QLG++YF V R+PRKQ   SCWNGS FPY+NCIW+ P
Sbjct: 1   MALSTTLSLHGAGAGTLFGGELWQLGHNYFGVFRRPRKQIFGSCWNGSPFPYRNCIWRVP 60

Query: 61  SSNNFHLKSMESSPLFAVGGEAEDGFLSNMNDDTDNMYDDLFKKYGNVVFKSNDQKLLSA 120
           S+NNF+LKS+ESSPLFAV GEAEDGFLSNMNDDT++MYD+LFKKYGNVVFKSNDQK  SA
Sbjct: 61  SANNFYLKSVESSPLFAVRGEAEDGFLSNMNDDTNDMYDELFKKYGNVVFKSNDQKPPSA 120

Query: 121 EVDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180
           E+DDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI
Sbjct: 121 EIDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180

Query: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240
           RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN
Sbjct: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240

Query: 241 QRPF 245
           QRPF
Sbjct: 241 QRPF 244

[Close]

BLAST of Lcy11g006720 vs. ExPASy TrEMBL
Match: A0A5D3CY15 (Oligomerization domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G001790 PE=3 SV=1)

HSP 1 Score: 439.9 bits (1130), Expect = 7.0e-120
Identity = 215/244 (88.11%), Postives = 227/244 (93.03%), Query Frame = 0


Query: 1   MVLSTILSLHSTGAGTSFGGELRQLGYDYFRVSRKPRKQFLSSCWNGSLFPYQNCIWKTP 60
           M LST LSLH  GAGT FGGEL QLG++YF V R+PRKQ   SCWNGS FPY+NCIW+ P
Sbjct: 1   MALSTTLSLHGAGAGTLFGGELWQLGHNYFGVFRRPRKQIFCSCWNGSPFPYRNCIWRVP 60

Query: 61  SSNNFHLKSMESSPLFAVGGEAEDGFLSNMNDDTDNMYDDLFKKYGNVVFKSNDQKLLSA 120
           S+NNF+LKS+ESSPLFAV GEAEDGFLSNMNDDT++MYD+LFKKYGNVVFKSNDQK  SA
Sbjct: 61  SANNFYLKSVESSPLFAVRGEAEDGFLSNMNDDTNDMYDELFKKYGNVVFKSNDQKPPSA 120

Query: 121 EVDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180
           E+DDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI
Sbjct: 121 EIDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180

Query: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240
           RDLAEKKYGRS SGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN
Sbjct: 181 RDLAEKKYGRSSSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240

Query: 241 QRPF 245
           QRPF
Sbjct: 241 QRPF 244

[Close]

BLAST of Lcy11g006720 vs. ExPASy TrEMBL
Match: A0A6J1FNP0 (protein Iojap, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111447435 PE=3 SV=1)

HSP 1 Score: 438.7 bits (1127), Expect = 1.6e-119
Identity = 215/244 (88.11%), Postives = 226/244 (92.62%), Query Frame = 0


Query: 1   MVLSTILSLHSTGAGTSFGGELRQLGYDYFRVSRKPRKQFLSSCWNGSLFPYQNCIWKTP 60
           M LS +LSLH  GAGTSFGG+ RQLG+DYF VS +PRKQF  SCWNGS F  QNCIWK P
Sbjct: 1   MALSIVLSLHGAGAGTSFGGQFRQLGHDYFGVSGRPRKQFWCSCWNGSSFSSQNCIWKIP 60

Query: 61  SSNNFHLKSMESSPLFAVGGEAEDGFLSNMNDDTDNMYDDLFKKYGNVVFKSNDQKLLSA 120
           SSNNFHLKSMESSPLFAVG EAED FLSNMN+DTD+MYDDLFKK+G+VVFK +DQK  +A
Sbjct: 61  SSNNFHLKSMESSPLFAVGKEAEDSFLSNMNEDTDDMYDDLFKKHGSVVFKRDDQKPPTA 120

Query: 121 EVDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180
           EVDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI
Sbjct: 121 EVDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180

Query: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240
           RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN
Sbjct: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240

Query: 241 QRPF 245
           Q+PF
Sbjct: 241 QQPF 244

[Close]

BLAST of Lcy11g006720 vs. ExPASy TrEMBL
Match: A0A6J1IZC7 (protein Iojap, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111481267 PE=3 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 2.0e-119
Identity = 215/244 (88.11%), Postives = 226/244 (92.62%), Query Frame = 0


Query: 1   MVLSTILSLHSTGAGTSFGGELRQLGYDYFRVSRKPRKQFLSSCWNGSLFPYQNCIWKTP 60
           M LS +LSLH  GA TSFGGE RQLG+DYFRVS +PRKQF  SCWNGS F  +NCIWK P
Sbjct: 1   MALSIVLSLHGAGAVTSFGGEFRQLGHDYFRVSGRPRKQFWCSCWNGSSFSSRNCIWKIP 60

Query: 61  SSNNFHLKSMESSPLFAVGGEAEDGFLSNMNDDTDNMYDDLFKKYGNVVFKSNDQKLLSA 120
           SS+NFHLKSMESSPLF+VG EAED FLSNMN+DTD+MYDDLFKK+GNVVFK NDQK  +A
Sbjct: 61  SSHNFHLKSMESSPLFSVGKEAEDSFLSNMNEDTDDMYDDLFKKHGNVVFKRNDQKPPTA 120

Query: 121 EVDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180
           EVDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI
Sbjct: 121 EVDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180

Query: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240
           RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN
Sbjct: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240

Query: 241 QRPF 245
           Q+PF
Sbjct: 241 QQPF 244

[Close]

BLAST of Lcy11g006720 vs. NCBI nr
Match: XP_004147757.1 (protein Iojap, chloroplastic [Cucumis sativus] >KGN53523.1 hypothetical protein Csa_014809 [Cucumis sativus])

HSP 1 Score: 448.7 bits (1153), Expect = 3.1e-122
Identity = 217/244 (88.93%), Postives = 228/244 (93.44%), Query Frame = 0


Query: 1   MVLSTILSLHSTGAGTSFGGELRQLGYDYFRVSRKPRKQFLSSCWNGSLFPYQNCIWKTP 60
           M LST LSLH  GAGT FG ELRQLG+DYF V ++PRKQ   SCWNGS FPY+NC+W+ P
Sbjct: 1   MALSTTLSLHGAGAGTLFGAELRQLGHDYFGVFKRPRKQIFCSCWNGSPFPYRNCLWRVP 60

Query: 61  SSNNFHLKSMESSPLFAVGGEAEDGFLSNMNDDTDNMYDDLFKKYGNVVFKSNDQKLLSA 120
           S NNFHLKSMESSPLFAVGGEAEDGFLSNMND+TD+MYD+LFKKYGNVVFKSNDQK  SA
Sbjct: 61  SVNNFHLKSMESSPLFAVGGEAEDGFLSNMNDETDDMYDELFKKYGNVVFKSNDQKPPSA 120

Query: 121 EVDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180
           E+DDD+ESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI
Sbjct: 121 EIDDDSESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180

Query: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240
           RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN
Sbjct: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240

Query: 241 QRPF 245
           QRPF
Sbjct: 241 QRPF 244

[Close]

BLAST of Lcy11g006720 vs. NCBI nr
Match: XP_038876545.1 (protein Iojap, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 447.2 bits (1149), Expect = 9.1e-122
Identity = 220/244 (90.16%), Postives = 227/244 (93.03%), Query Frame = 0


Query: 1   MVLSTILSLHSTGAGTSFGGELRQLGYDYFRVSRKPRKQFLSSCWNGSLFPYQNCIWKTP 60
           M LST LSLH  GAGT FGGELRQLG+D FRVS++PRKQ   SCWNGS FP QNCIW  P
Sbjct: 1   MALSTTLSLHGAGAGTLFGGELRQLGHDNFRVSKRPRKQNFCSCWNGSPFPNQNCIWGMP 60

Query: 61  SSNNFHLKSMESSPLFAVGGEAEDGFLSNMNDDTDNMYDDLFKKYGNVVFKSNDQKLLSA 120
           S+NNFHLKSME SPLFAV GEAEDGFLSNMNDDTD+MYDDLFKK+GNVVFKSNDQK  SA
Sbjct: 61  SANNFHLKSMECSPLFAVEGEAEDGFLSNMNDDTDDMYDDLFKKFGNVVFKSNDQKPPSA 120

Query: 121 EVDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180
           E+DDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI
Sbjct: 121 EIDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180

Query: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240
           RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN
Sbjct: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240

Query: 241 QRPF 245
           QRPF
Sbjct: 241 QRPF 244

[Close]

BLAST of Lcy11g006720 vs. NCBI nr
Match: KAA0062957.1 (Oligomerization domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 443.4 bits (1139), Expect = 1.3e-120
Identity = 216/244 (88.52%), Postives = 228/244 (93.44%), Query Frame = 0


Query: 1   MVLSTILSLHSTGAGTSFGGELRQLGYDYFRVSRKPRKQFLSSCWNGSLFPYQNCIWKTP 60
           M LST LSLH  GAGT FGGEL QLG++YF V R+PRKQ   SCWNGS FPY+NCIW+ P
Sbjct: 1   MALSTTLSLHGAGAGTLFGGELWQLGHNYFGVFRRPRKQIFGSCWNGSPFPYRNCIWRVP 60

Query: 61  SSNNFHLKSMESSPLFAVGGEAEDGFLSNMNDDTDNMYDDLFKKYGNVVFKSNDQKLLSA 120
           S+NNF+LKS+ESSPLFAV GEAEDGFLSNMNDDT++MYD+LFKKYGNVVFKSNDQK  SA
Sbjct: 61  SANNFYLKSVESSPLFAVRGEAEDGFLSNMNDDTNDMYDELFKKYGNVVFKSNDQKPPSA 120

Query: 121 EVDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180
           E+DDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI
Sbjct: 121 EIDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180

Query: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240
           RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN
Sbjct: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240

Query: 241 QRPF 245
           QRPF
Sbjct: 241 QRPF 244

[Close]

BLAST of Lcy11g006720 vs. NCBI nr
Match: KAG7031113.1 (Protein Iojap, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 439.9 bits (1130), Expect = 1.4e-119
Identity = 216/244 (88.52%), Postives = 226/244 (92.62%), Query Frame = 0


Query: 1   MVLSTILSLHSTGAGTSFGGELRQLGYDYFRVSRKPRKQFLSSCWNGSLFPYQNCIWKTP 60
           M LS +LSLH  GAGTSFGGE RQLG+DYFRVS +PRKQF  SCWNGS F   NCIWK P
Sbjct: 519 MALSIVLSLHGAGAGTSFGGEFRQLGHDYFRVSGRPRKQFWCSCWNGSSFSSLNCIWKIP 578

Query: 61  SSNNFHLKSMESSPLFAVGGEAEDGFLSNMNDDTDNMYDDLFKKYGNVVFKSNDQKLLSA 120
           SSNNFHLKSMESSPLFAVG EAED FLSNMN+DTD+MYDDLFKK+G+VVFK +DQK  +A
Sbjct: 579 SSNNFHLKSMESSPLFAVGKEAEDSFLSNMNEDTDDMYDDLFKKHGSVVFKRDDQKPPTA 638

Query: 121 EVDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180
           EVDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI
Sbjct: 639 EVDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 698

Query: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240
           RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN
Sbjct: 699 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 758

Query: 241 QRPF 245
           Q+PF
Sbjct: 759 QQPF 762

[Close]

BLAST of Lcy11g006720 vs. NCBI nr
Match: KAG6600465.1 (Protein Iojap, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 439.9 bits (1130), Expect = 1.4e-119
Identity = 216/244 (88.52%), Postives = 226/244 (92.62%), Query Frame = 0


Query: 1   MVLSTILSLHSTGAGTSFGGELRQLGYDYFRVSRKPRKQFLSSCWNGSLFPYQNCIWKTP 60
           M LS +LSLH  GAGTSFGGE RQLG+DYFRVS +PRKQF  SCWNGS F   NCIWK P
Sbjct: 592 MALSIVLSLHGAGAGTSFGGEFRQLGHDYFRVSGRPRKQFWCSCWNGSSFSSLNCIWKIP 651

Query: 61  SSNNFHLKSMESSPLFAVGGEAEDGFLSNMNDDTDNMYDDLFKKYGNVVFKSNDQKLLSA 120
           SSNNFHLKSMESSPLFAVG EAED FLSNMN+DTD+MYDDLFKK+G+VVFK +DQK  +A
Sbjct: 652 SSNNFHLKSMESSPLFAVGKEAEDSFLSNMNEDTDDMYDDLFKKHGSVVFKRDDQKPPTA 711

Query: 121 EVDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180
           EVDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI
Sbjct: 712 EVDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 771

Query: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240
           RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN
Sbjct: 772 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 831

Query: 241 QRPF 245
           Q+PF
Sbjct: 832 QQPF 835

[Close]

BLAST of Lcy11g006720 vs. TAIR 10
Match: AT3G12930.1 (Lojap-related protein )

HSP 1 Score: 288.5 bits (737), Expect = 5.0e-78
Identity = 154/232 (66.38%), Postives = 174/232 (75.00%), Query Frame = 0


Query: 12  TGAGTSFGGELRQLGYDYFRVSRKPRK--QFLSSCWNGSLFPYQNCIWKTPSSNNFHLKS 71
           T AG    G+ R         S  PRK    LS   N  L    NC W+   S    L S
Sbjct: 8   TVAGALLAGDFRLPAVS----SLIPRKTSSSLSCLSNRDLSSPYNCCWRL--SRGKILTS 67

Query: 72  MESSPLFAVGGEAEDGFLSNMNDDTDNMYDDLFKKYGNVVFKSNDQKLLSAEVDDDAESL 131
           + +S  FAVG EAEDGFLSN+++DTD M+DDLF KYG VVF+S D K  +AEVDDDAESL
Sbjct: 68  LSNSRKFAVGKEAEDGFLSNVSEDTDEMFDDLFNKYGKVVFRSTDVKSPTAEVDDDAESL 127

Query: 132 SFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRIRDLAEKKYG 191
           +FAV +AKVASDVKA DI+VLFVKPLVYWTRFFIIATAFSRPQIDAIGSR+RDLAEKKYG
Sbjct: 128 AFAVELAKVASDVKAGDIKVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRMRDLAEKKYG 187

Query: 192 RSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFENQ 242
           +  +GDVKPNSWTLLDFGDVVIH+FLP QR FYNLE+FYGNA  +ELPFE+Q
Sbjct: 188 KVANGDVKPNSWTLLDFGDVVIHLFLPPQRTFYNLEDFYGNAMQIELPFEDQ 233

The following BLAST results are available for this feature:

BLAST of Lcy11g006720 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LDY9	7.1e-77	66.38	Protein Iojap, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=IJ PE=2 SV=1	[more]
Q41822	2.0e-55	66.67	Protein Iojap, chloroplastic OS=Zea mays OX=4577 GN=Ij PE=1 SV=1	[more]
P73658	1.7e-14	40.59	Ribosomal silencing factor RsfS OS=Synechocystis sp. (strain PCC 6803 / Kazusa) ...	[more]
Q97P97	4.4e-10	36.54	Ribosomal silencing factor RsfS OS=Streptococcus pneumoniae serotype 4 (strain A...	[more]
Q9KD89	6.3e-09	34.23	Ribosomal silencing factor RsfS OS=Bacillus halodurans (strain ATCC BAA-125 / DS...	[more]

BLAST of Lcy11g006720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KVG5	1.5e-122	88.93	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G064060 PE=3 SV=1	[more]
A0A5A7V7J6	6.3e-121	88.52	Oligomerization domain-containing protein OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A5D3CY15	7.0e-120	88.11	Oligomerization domain-containing protein OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A6J1FNP0	1.6e-119	88.11	protein Iojap, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111447435 PE=3 ...	[more]
A0A6J1IZC7	2.0e-119	88.11	protein Iojap, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111481267 PE=3 SV...	[more]

BLAST of Lcy11g006720 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147757.1	3.1e-122	88.93	protein Iojap, chloroplastic [Cucumis sativus] >KGN53523.1 hypothetical protein ...	[more]
XP_038876545.1	9.1e-122	90.16	protein Iojap, chloroplastic isoform X2 [Benincasa hispida]	[more]
KAA0062957.1	1.3e-120	88.52	Oligomerization domain-containing protein [Cucumis melo var. makuwa]	[more]
KAG7031113.1	1.4e-119	88.52	Protein Iojap, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6600465.1	1.4e-119	88.52	Protein Iojap, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Lcy11g006720 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12930.1	5.0e-78	66.38	Lojap-related protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF02410	RsfS	coord: 135..228 e-value: 4.5E-20 score: 71.9
None	No IPR available	PANTHER	PTHR21043:SF2	PROTEIN IOJAP, CHLOROPLASTIC	coord: 2..243
IPR004394	Protein Iojap/ribosomal silencing factor RsfS	TIGRFAM	TIGR00090	TIGR00090	coord: 135..228 e-value: 1.3E-20 score: 71.4
IPR004394	Protein Iojap/ribosomal silencing factor RsfS	PANTHER	PTHR21043	IOJAP SUPERFAMILY ORTHOLOG	coord: 2..243
IPR004394	Protein Iojap/ribosomal silencing factor RsfS	HAMAP	MF_01477	Iojap_RsfS	coord: 126..229 score: 18.436813
IPR043519	Nucleotidyltransferase superfamily	GENE3D	3.30.460.10	Beta Polymerase, domain 2	coord: 128..237 e-value: 1.5E-23 score: 84.7
IPR043519	Nucleotidyltransferase superfamily	SUPERFAMILY	81301	Nucleotidyltransferase	coord: 129..238

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy11g006720.1	Lcy11g006720.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090071	negative regulation of ribosome biogenesis
biological_process	GO:0017148	negative regulation of translation
cellular_component	GO:0042644	chloroplast nucleoid
cellular_component	GO:0000427	plastid-encoded plastid RNA polymerase complex
molecular_function	GO:0043023	ribosomal large subunit binding